F347365

General Info

Members Datasets Scaffolds Average Seq Length
234 144 468 495

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0080893|Ga0453684_0080893_1750_3420
Length 556
Sequence MHWLISRIQWRVQNKKPLVIGDLVHCRTKGKSSMTELNLIQLNGASLTFDQVNAVAYGKPNAPRIQIGAEAGQKVTRAADAVQTLLKQGVIAYGITTGFGAFKDRIIPPDQVEQLQRNILVSHAVGVGDAFDIPTTRAIMLIRANTLARGHSGIRLSTLQLLVDMLNAGIHPVIPEKGSLGASGDLAPLAHMSLPIIGEGTVEYQGEIISGTEAFKRAGLKPIKLAAKEGLALTNGTSVMTALGVLETLRAERYSQTADIAGCLSLEALNGTDLALDERIHNLRPYPRQKECASYLRSLLKDSQFTREHESLNVQDAYTLRCMPQVHGAVRDAIAYSRWVFEIELNAVTDNPLIFIDDATGKIEVLSGGNFHGEPLAIAMDYLAFSVSELGNISERRIMRLTDESSNIHTLPAFLTAEGGLNSGFMILQYTAAALVTENKVLSHPASVDTIPTSANVEDHVSMGVTAGLKLRDILANVERILAIELMSAAQGIDFRKKVIGAEKTLGRGTRGVYKLIREHIPFIDADQPMSGYIETSRQFVASGEIVRSVERALVS

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
84 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
85 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
89 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
92 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
93 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
94 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
98 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
99 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
100 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
101 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
102 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
103 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
104 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
105 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
106 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
107 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
108 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
111 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
129 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
134 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.57
Metatranscriptomes 0.43
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.71
Nodule 0
Rhizoplane 3.85
Rhizosphere 94.02
Stem 0
Stem Tuber 0
Unclassified 6.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0080893 3300044712 Bacteria 4054
2 Ga0065165_1002616 3300005262 Bacteria 14713
3 Ga0070683_100019483 3300005329 Bacteria 6026
4 Ga0070682_100041132 3300005337 Unclassified 2848
5 Ga0068868_100178646 3300005338 Bacteria 1760
6 Ga0070660_100155850 3300005339 Unclassified 1838
7 Ga0070689_100071901 3300005340 Bacteria 2703
8 Ga0070668_100042813 3300005347 Unclassified 3471
9 Ga0070674_100081790 3300005356 Bacteria 2309
10 Ga0070659_100061074 3300005366 Bacteria 2978
11 Ga0070711_100061407 3300005439 Bacteria 2616
12 Ga0070705_100084884 3300005440 Bacteria 1955
13 Ga0070662_100024110 3300005457 Bacteria 4187
14 Ga0070706_100026496 3300005467 Bacteria 5333
15 Ga0070706_100040513 3300005467 Bacteria 4300
16 Ga0070706_100108121 3300005467 Bacteria 2587
17 Ga0070707_100024611 3300005468 Bacteria 5704
18 Ga0070698_100000581 3300005471 Bacteria 39265
19 Ga0070698_100244205 3300005471 Bacteria 1729
20 Ga0070699_100255810 3300005518 Bacteria 1566
21 Ga0070696_100032124 3300005546 Bacteria 3601
22 Ga0070665_100017346 3300005548 Bacteria 7227
23 Ga0068855_100096964 3300005563 Bacteria 3396
24 Ga0068852_100153567 3300005616 Bacteria 2143
25 Ga0068859_100031210 3300005617 Bacteria 5348
26 Ga0068859_100032933 3300005617 Bacteria 5206
27 Ga0068859_100083201 3300005617 Bacteria 3243
28 Ga0068866_10019374 3300005718 Unclassified 3096
29 Ga0068858_100118627 3300005842 Bacteria 2473
30 Ga0068860_100008434 3300005843 Bacteria 10264
31 Ga0068862_100068914 3300005844 Bacteria 3052
32 Ga0081455_10003164 3300005937 Bacteria 19121
33 Ga0081455_10012617 3300005937 Bacteria 8419
34 Ga0081455_10029731 3300005937 Bacteria 4976
35 Ga0081538_10000976 3300005981 Bacteria 30480
36 Ga0081538_10079956 3300005981 Bacteria 1746
37 Ga0081539_10023481 3300005985 Bacteria 4040
38 Ga0070717_10005125 3300006028 Bacteria 9553
39 Ga0075432_10000607 3300006058 Bacteria 10864
40 Ga0075432_10006217 3300006058 Bacteria 4060
41 Ga0070716_100070861 3300006173 Bacteria 2048
42 Ga0075428_100012749 3300006844 Bacteria 9346
43 Ga0075428_100023869 3300006844 Bacteria 6768
44 Ga0075428_100088584 3300006844 Bacteria 3376
45 Ga0075428_100285445 3300006844 Bacteria 1776
46 Ga0075430_100016599 3300006846 Bacteria 6270
47 Ga0075430_100057253 3300006846 Bacteria 3279
48 Ga0075431_100023293 3300006847 Bacteria 6335
49 Ga0075431_100023727 3300006847 Bacteria 6279
50 Ga0075431_100040071 3300006847 Bacteria 4827
51 Ga0075431_100063727 3300006847 Bacteria 3804
52 Ga0075433_10001505 3300006852 Bacteria 17217
53 Ga0075433_10009780 3300006852 Bacteria 7683
54 Ga0075433_10188148 3300006852 Bacteria 1837
55 Ga0075434_100015355 3300006871 Bacteria 7338
56 Ga0075434_100021457 3300006871 Bacteria 6276
57 Ga0075429_100000194 3300006880 Bacteria 40201
58 Ga0075429_100031660 3300006880 Bacteria 4596
59 Ga0068865_100047212 3300006881 Unclassified 2958
60 Ga0075436_100000364 3300006914 Bacteria 28914
61 Ga0075436_100005113 3300006914 Bacteria 9030
62 Ga0075436_100012893 3300006914 Bacteria 5732
63 Ga0075436_100030621 3300006914 Bacteria 3702
64 Ga0097620_100031210 3300006931 Bacteria 5348
65 Ga0097620_100032933 3300006931 Bacteria 5206
66 Ga0097620_100083201 3300006931 Bacteria 3243
67 Ga0075435_100001277 3300007076 Bacteria 16163
68 Ga0105240_10001697 3300009093 Bacteria 37330
69 Ga0111539_10005128 3300009094 Bacteria 16989
70 Ga0111539_10007562 3300009094 Bacteria 13892
71 Ga0111539_10166845 3300009094 Bacteria 2574
72 Ga0105245_10023715 3300009098 Bacteria 5386
73 Ga0105247_10033148 3300009101 Unclassified 3140
74 Ga0114129_10002707 3300009147 Bacteria 24688
75 Ga0114129_10003851 3300009147 Bacteria 21162
76 Ga0114129_10006611 3300009147 Bacteria 16459
77 Ga0105241_10000563 3300009174 Bacteria 28046
78 Ga0105237_10074195 3300009545 Bacteria 3394
79 Ga0105238_10003385 3300009551 Bacteria 15919
80 Ga0105249_10039281 3300009553 Bacteria 4296
81 Ga0105249_10072512 3300009553 Bacteria 3183
82 Ga0157374_10000790 3300013296 Bacteria 27725
83 Ga0157378_10013557 3300013297 Bacteria 7131
84 Ga0163162_10048616 3300013306 Unclassified 4250
85 Ga0163162_10119326 3300013306 Bacteria 2740
86 Ga0157372_10047403 3300013307 Bacteria 4775
87 Ga0157380_10088604 3300014326 Bacteria 2547
88 Ga0163161_10115965 3300017792 Bacteria 2007
89 Ga0209130_1000045 3300025284 Bacteria 240278
90 Ga0209025_1000852 3300025294 Bacteria 48287
91 Ga0207692_10025311 3300025898 Bacteria 2770
92 Ga0207642_10030548 3300025899 Unclassified 2246
93 Ga0207688_10070735 3300025901 Bacteria 1979
94 Ga0207685_10008812 3300025905 Bacteria 2897
95 Ga0207699_10007797 3300025906 Bacteria 5246
96 Ga0207684_10022505 3300025910 Bacteria 5380
97 Ga0207695_10000096 3300025913 Bacteria 265048
98 Ga0207663_10011034 3300025916 Bacteria 4833
99 Ga0207646_10046173 3300025922 Bacteria 3908
100 Ga0207687_10016539 3300025927 Bacteria 4846
101 Ga0207644_10007767 3300025931 Bacteria 7003
102 Ga0207644_10114104 3300025931 Bacteria 2047
103 Ga0207706_10013427 3300025933 Bacteria 7445
104 Ga0207706_10064921 3300025933 Bacteria 3214
105 Ga0207706_10164307 3300025933 Bacteria 1951
106 Ga0207670_10063990 3300025936 Bacteria 2519
107 Ga0207712_10001435 3300025961 Bacteria 16262
108 Ga0207668_10024894 3300025972 Bacteria 3869
109 Ga0207668_10046270 3300025972 Unclassified 2972
110 Ga0207641_10008756 3300026088 Bacteria 8358
111 Ga0207675_100052807 3300026118 Bacteria 3792
112 Ga0207698_10122230 3300026142 Bacteria 2206
113 Ga0209983_1004641 3300027665 Bacteria 2881
114 Ga0207428_10000858 3300027907 Bacteria 34254
115 Ga0207428_10002993 3300027907 Bacteria 16687
116 Ga0268266_10036425 3300028379 Bacteria 4188
117 Ga0268265_10007835 3300028380 Bacteria 7209
118 Ga0268265_10028708 3300028380 Bacteria 3987
119 Ga0268264_10040014 3300028381 Bacteria 3873
120 Ga0265760_10000302 3300031090 Bacteria 13569
121 Ga0265332_10020137 3300031238 Bacteria 2945
122 Ga0265339_10000040 3300031249 Bacteria 120556
123 Ga0265316_10028731 3300031344 Bacteria 4583
124 Ga0307408_100016781 3300031548 Bacteria 4895
125 Ga0316575_10000597 3300031665 Bacteria 10628
126 Ga0316579_10013857 3300031691 Bacteria 3476
127 Ga0265342_10010153 3300031712 Bacteria 6560
128 Ga0265342_10048282 3300031712 Bacteria 2553
129 Ga0316576_10000441 3300031727 Bacteria 19323
130 Ga0316576_10000663 3300031727 Bacteria 16721
131 Ga0316576_10003792 3300031727 Bacteria 8938
132 Ga0316576_10008524 3300031727 Bacteria 6548
133 Ga0316576_10053603 3300031727 Unclassified 2939
134 Ga0316578_10021485 3300031728 Bacteria 3582
135 Ga0307516_10051858 3300031730 Bacteria 4019
136 Ga0316577_10000537 3300031733 Bacteria 15308
137 Ga0316577_10002436 3300031733 Bacteria 9210
138 Ga0316577_10009615 3300031733 Bacteria 5205
139 Ga0316577_10033520 3300031733 Bacteria 2869
140 Ga0307410_10005032 3300031852 Bacteria 6941
141 Ga0307410_10064112 3300031852 Bacteria 2523
142 Ga0307406_10046710 3300031901 Bacteria 2725
143 Ga0307407_10010577 3300031903 Bacteria 4359
144 Ga0307412_10070964 3300031911 Bacteria 2376
145 Ga0307409_100013947 3300031995 Bacteria 5201
146 Ga0307409_100117682 3300031995 Unclassified 2243
147 Ga0307416_100121258 3300032002 Bacteria 2331
148 Ga0307416_100127794 3300032002 Bacteria 2280
149 Ga0307414_10021482 3300032004 Bacteria 4051
150 Ga0307411_10057889 3300032005 Bacteria 2562
151 Ga0307415_100037204 3300032126 Bacteria 3196
152 Ga0307415_100057666 3300032126 Bacteria 2670
153 Ga0316583_10000425 3300032133 Bacteria 12376
154 Ga0316585_10000243 3300032137 Bacteria 11592
155 Ga0316585_10011632 3300032137 Unclassified 2597
156 Ga0316580_10000028 3300032139 Bacteria 22787
157 Ga0316580_10009161 3300032139 Unclassified 2975
158 Ga0373939_0003779 3300035114 Bacteria 3570
159 Ga0316574_0000530 3300035398 Bacteria 15664
160 Ga0316574_0014362 3300035398 Bacteria 4575
161 Ga0316574_0076950 3300035398 Bacteria 2114
162 Ga0373931_0010571 3300035691 Bacteria 4437
163 Ga0316582_0003467 3300036647 Bacteria 7741
164 Ga0316582_0012545 3300036647 Bacteria 4735
165 Ga0316584_0000300 3300036712 Bacteria 25308
166 Ga0316584_0029920 3300036712 Bacteria 4021
167 Ga0316584_0147151 3300036712 Unclassified 1755
168 Ga0373925_0013296 3300037068 Bacteria 5958
169 Ga0395900_0004081 3300037418 Bacteria 15571
170 Ga0316581_0019597 3300037588 Bacteria 1974
171 Ga0436361_0658419 3300039447 Bacteria 6335
172 Ga0451577_0001155 3300042876 Bacteria 37281
173 Ga0451577_0001314 3300042876 Bacteria 33976
174 Ga0451577_0025468 3300042876 Bacteria 5366
175 Ga0466972_0053793 3300044658 Bacteria 1938
176 Ga0453683_0019356 3300044673 Bacteria 4362
177 Ga0466964_0008822 3300044706 Bacteria 3790
178 Ga0453684_0000023 3300044712 Bacteria 857153
179 Ga0453684_0000024 3300044712 Bacteria 819351
180 Ga0453684_0000157 3300044712 Bacteria 304259
181 Ga0453684_0001946 3300044712 Bacteria 53274
182 Ga0453684_0003096 3300044712 Bacteria 38321
183 Ga0453684_0003690 3300044712 Bacteria 33928
184 Ga0453684_0007426 3300044712 Bacteria 20158
185 Ga0453684_0021735 3300044712 Bacteria 9566
186 Ga0453684_0038087 3300044712 Bacteria 6583
187 Ga0453684_0045325 3300044712 Bacteria 5869
188 Ga0453684_0052663 3300044712 Bacteria 5320
189 Ga0453684_0151340 3300044712 Bacteria 2757
190 Ga0453684_0168371 3300044712 Bacteria 2585
191 Ga0466959_0104415 3300045049 Bacteria 2027
192 Ga0451576_0019126 3300045051 Bacteria 7482
193 Ga0451576_0045551 3300045051 Bacteria 4619
194 Ga0466958_0047436 3300045836 Bacteria 2593
195 Ga0495629_0130072 3300046459 Bacteria 1754
196 Ga0495586_0013076 3300046535 Bacteria 4398
197 Ga0496101_0028915 3300048904 Bacteria 3874
198 Ga0496102_0000107 3300048905 Bacteria 118250
199 Ga0496102_0140968 3300048905 Bacteria 2260
200 Ga0496104_0020173 3300048907 Bacteria 6106
201 Ga0496104_0206395 3300048907 Bacteria 1876
202 Ga0496106_0069804 3300048909 Bacteria 2682
203 Ga0496107_0150503 3300048910 Bacteria 1721
204 Ga0496112_0085967 3300048915 Bacteria 3111
205 Ga0496114_0130652 3300048917 Bacteria 2168
206 Ga0501073_0000723 3300049589 Bacteria 23299
207 Ga0501083_0041348 3300049744 Bacteria 3126
208 Ga0501275_000057 3300049772 Bacteria 11386
209 nmdc:mga05p37_1481_c1 3300050507 Bacteria 27290
210 nmdc:mga05p37_2097_c1 3300050507 Bacteria 23274
211 nmdc:mga05p37_84391_c1 3300050507 Bacteria 3913
212 nmdc:mga09592_111245_c1 3300050508 Bacteria 2350
213 nmdc:mga09592_11296_c1 3300050508 Bacteria 7266
214 nmdc:mga09592_262_c1 3300050508 Bacteria 38254
215 nmdc:mga0qj67_61224_c1 3300050509 Bacteria 2988
216 nmdc:mga06r32_14732_c1 3300050510 Bacteria 7096
217 nmdc:mga06r32_17427_c1 3300050510 Bacteria 6556
218 nmdc:mga06r32_23034_c1 3300050510 Bacteria 5760
219 nmdc:mga06r32_9493_c1 3300050510 Bacteria 8783
220 nmdc:mga08y16_2328_c1 3300050511 Bacteria 19470
221 nmdc:mga08y16_277381_c1 3300050511 Unclassified 1730
222 nmdc:mga08y16_3127_c1 3300050511 Bacteria 17141
223 nmdc:mga0n895_121718_c1 3300050512 Bacteria 2631
224 nmdc:mga0n895_22715_c1 3300050512 Bacteria 5884
225 nmdc:mga0n895_2430_c1 3300050512 Bacteria 14534
226 nmdc:mga0n895_25275_c1 3300050512 Bacteria 5609
227 nmdc:mga0rr50_42697_c1 3300050513 Bacteria 3313
228 nmdc:mga0rr50_4712_c1 3300050513 Bacteria 8041
229 nmdc:mga08x19_1508_c1 3300050514 Bacteria 14424
230 nmdc:mga08x19_42548_c1 3300050514 Bacteria 2896
231 nmdc:mga08x19_4906_c1 3300050514 Bacteria 7900
232 nmdc:mga0a205_2191_c1 3300050515 Bacteria 17194
233 nmdc:mga0a205_24627_c1 3300050515 Bacteria 5727
234 Ga0500577_0030499 3300053142 Bacteria 1878
235 Ga0453684_0080893
236 Ga0065165_1002616
237 Ga0070683_100019483
238 Ga0070682_100041132
239 Ga0068868_100178646
240 Ga0070660_100155850
241 Ga0070689_100071901
242 Ga0070668_100042813
243 Ga0070674_100081790
244 Ga0070659_100061074
245 Ga0070711_100061407
246 Ga0070705_100084884
247 Ga0070662_100024110
248 Ga0070706_100026496
249 Ga0070706_100040513
250 Ga0070706_100108121
251 Ga0070707_100024611
252 Ga0070698_100000581
253 Ga0070698_100244205
254 Ga0070699_100255810
255 Ga0070696_100032124
256 Ga0070665_100017346
257 Ga0068855_100096964
258 Ga0068852_100153567
259 Ga0068859_100031210
260 Ga0068859_100032933
261 Ga0068859_100083201
262 Ga0068866_10019374
263 Ga0068858_100118627
264 Ga0068860_100008434
265 Ga0068862_100068914
266 Ga0081455_10003164
267 Ga0081455_10012617
268 Ga0081455_10029731
269 Ga0081538_10000976
270 Ga0081538_10079956
271 Ga0081539_10023481
272 Ga0070717_10005125
273 Ga0075432_10000607
274 Ga0075432_10006217
275 Ga0070716_100070861
276 Ga0075428_100012749
277 Ga0075428_100023869
278 Ga0075428_100088584
279 Ga0075428_100285445
280 Ga0075430_100016599
281 Ga0075430_100057253
282 Ga0075431_100023293
283 Ga0075431_100023727
284 Ga0075431_100040071
285 Ga0075431_100063727
286 Ga0075433_10001505
287 Ga0075433_10009780
288 Ga0075433_10188148
289 Ga0075434_100015355
290 Ga0075434_100021457
291 Ga0075429_100000194
292 Ga0075429_100031660
293 Ga0068865_100047212
294 Ga0075436_100000364
295 Ga0075436_100005113
296 Ga0075436_100012893
297 Ga0075436_100030621
298 Ga0097620_100031210
299 Ga0097620_100032933
300 Ga0097620_100083201
301 Ga0075435_100001277
302 Ga0105240_10001697
303 Ga0111539_10005128
304 Ga0111539_10007562
305 Ga0111539_10166845
306 Ga0105245_10023715
307 Ga0105247_10033148
308 Ga0114129_10002707
309 Ga0114129_10003851
310 Ga0114129_10006611
311 Ga0105241_10000563
312 Ga0105237_10074195
313 Ga0105238_10003385
314 Ga0105249_10039281
315 Ga0105249_10072512
316 Ga0157374_10000790
317 Ga0157378_10013557
318 Ga0163162_10048616
319 Ga0163162_10119326
320 Ga0157372_10047403
321 Ga0157380_10088604
322 Ga0163161_10115965
323 Ga0209130_1000045
324 Ga0209025_1000852
325 Ga0207692_10025311
326 Ga0207642_10030548
327 Ga0207688_10070735
328 Ga0207685_10008812
329 Ga0207699_10007797
330 Ga0207684_10022505
331 Ga0207695_10000096
332 Ga0207663_10011034
333 Ga0207646_10046173
334 Ga0207687_10016539
335 Ga0207644_10007767
336 Ga0207644_10114104
337 Ga0207706_10013427
338 Ga0207706_10064921
339 Ga0207706_10164307
340 Ga0207670_10063990
341 Ga0207712_10001435
342 Ga0207668_10024894
343 Ga0207668_10046270
344 Ga0207641_10008756
345 Ga0207675_100052807
346 Ga0207698_10122230
347 Ga0209983_1004641
348 Ga0207428_10000858
349 Ga0207428_10002993
350 Ga0268266_10036425
351 Ga0268265_10007835
352 Ga0268265_10028708
353 Ga0268264_10040014
354 Ga0265760_10000302
355 Ga0265332_10020137
356 Ga0265339_10000040
357 Ga0265316_10028731
358 Ga0307408_100016781
359 Ga0316575_10000597
360 Ga0316579_10013857
361 Ga0265342_10010153
362 Ga0265342_10048282
363 Ga0316576_10000441
364 Ga0316576_10000663
365 Ga0316576_10003792
366 Ga0316576_10008524
367 Ga0316576_10053603
368 Ga0316578_10021485
369 Ga0307516_10051858
370 Ga0316577_10000537
371 Ga0316577_10002436
372 Ga0316577_10009615
373 Ga0316577_10033520
374 Ga0307410_10005032
375 Ga0307410_10064112
376 Ga0307406_10046710
377 Ga0307407_10010577
378 Ga0307412_10070964
379 Ga0307409_100013947
380 Ga0307409_100117682
381 Ga0307416_100121258
382 Ga0307416_100127794
383 Ga0307414_10021482
384 Ga0307411_10057889
385 Ga0307415_100037204
386 Ga0307415_100057666
387 Ga0316583_10000425
388 Ga0316585_10000243
389 Ga0316585_10011632
390 Ga0316580_10000028
391 Ga0316580_10009161
392 Ga0373939_0003779
393 Ga0316574_0000530
394 Ga0316574_0014362
395 Ga0316574_0076950
396 Ga0373931_0010571
397 Ga0316582_0003467
398 Ga0316582_0012545
399 Ga0316584_0000300
400 Ga0316584_0029920
401 Ga0316584_0147151
402 Ga0373925_0013296
403 Ga0395900_0004081
404 Ga0316581_0019597
405 Ga0436361_0658419
406 Ga0451577_0001155
407 Ga0451577_0001314
408 Ga0451577_0025468
409 Ga0466972_0053793
410 Ga0453683_0019356
411 Ga0466964_0008822
412 Ga0453684_0000023
413 Ga0453684_0000024
414 Ga0453684_0000157
415 Ga0453684_0001946
416 Ga0453684_0003096
417 Ga0453684_0003690
418 Ga0453684_0007426
419 Ga0453684_0021735
420 Ga0453684_0038087
421 Ga0453684_0045325
422 Ga0453684_0052663
423 Ga0453684_0151340
424 Ga0453684_0168371
425 Ga0466959_0104415
426 Ga0451576_0019126
427 Ga0451576_0045551
428 Ga0466958_0047436
429 Ga0495629_0130072
430 Ga0495586_0013076
431 Ga0496101_0028915
432 Ga0496102_0000107
433 Ga0496102_0140968
434 Ga0496104_0020173
435 Ga0496104_0206395
436 Ga0496106_0069804
437 Ga0496107_0150503
438 Ga0496112_0085967
439 Ga0496114_0130652
440 Ga0501073_0000723
441 Ga0501083_0041348
442 Ga0501275_000057
443 nmdc:mga05p37_1481_c1
444 nmdc:mga05p37_2097_c1
445 nmdc:mga05p37_84391_c1
446 nmdc:mga09592_111245_c1
447 nmdc:mga09592_11296_c1
448 nmdc:mga09592_262_c1
449 nmdc:mga0qj67_61224_c1
450 nmdc:mga06r32_14732_c1
451 nmdc:mga06r32_17427_c1
452 nmdc:mga06r32_23034_c1
453 nmdc:mga06r32_9493_c1
454 nmdc:mga08y16_2328_c1
455 nmdc:mga08y16_277381_c1
456 nmdc:mga08y16_3127_c1
457 nmdc:mga0n895_121718_c1
458 nmdc:mga0n895_22715_c1
459 nmdc:mga0n895_2430_c1
460 nmdc:mga0n895_25275_c1
461 nmdc:mga0rr50_42697_c1
462 nmdc:mga0rr50_4712_c1
463 nmdc:mga08x19_1508_c1
464 nmdc:mga08x19_42548_c1
465 nmdc:mga08x19_4906_c1
466 nmdc:mga0a205_2191_c1
467 nmdc:mga0a205_24627_c1
468 Ga0500577_0030499

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00221

Lyase_aromatic

Aromatic amino acid lyase

47

519

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o43-assembly1.cif.gz_A complex of an alpha/beta-peptide based on the gp41 chr domain bound to gp41-5 0.5565 234 467
1z23-assembly1.cif.gz_A the serine-rich domain from crk-associated substrate (p130cas) 0.5523 283 458
3o43-assembly1.cif.gz_A complex of an alpha/beta-peptide based on the gp41 chr domain bound to gp41-5 0.523 234 467
1z23-assembly1.cif.gz_A the serine-rich domain from crk-associated substrate (p130cas) 0.5153 283 458
7tqr-assembly1.cif.gz_A crystal structure of histidine ammonia lyase from thermoplasma acidophilum 0.5138 1 511
ID Description Score Start End Superfamily
af_Q4E133_1_200_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9414 1 206 1.10.275.10
3unvB01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9388 2 206 1.10.275.10
af_Q2G2P7_3_196_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9364 3 206 1.10.275.10
af_Q556V9_1_206_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9363 2 206 1.10.275.10
1b8fA01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9338 1 206 1.10.275.10
ID Description Score Start End GO Terms
AF-A0A4Q3J628-F1-model_v4 Aromatic amino acid lyase 0.9703 333 520 GO:0016841
AF-A0A074TM47-F1-model_v4 deleted 0.9672 338 520
AF-A0A4Q3J628-F1-model_v4 Aromatic amino acid lyase 0.9653 333 520 GO:0016841
AF-Q201B7-F1-model_v4 HutH 0.9649 277 418 GO:0016841
AF-A0A7X6Z1F7-F1-model_v4 Aromatic amino acid lyase 0.9637 284 520 GO:0016841

Map