F347364

General Info

Members Datasets Scaffolds Average Seq Length
234 163 468 522

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0002940|Ga0453684_0002940_38110_39783
Length 557
Sequence MIKTYLSCVALLSCMFFSNKIHAQQATNPIIFADVPDMSMMRVGDTYYMSSTTMHMSPGVPIMKSKDLVNWQLVSYAYDTLANMDALNLTNGKNSYGLGSWASSIRYHNNTFYVSTFAATTGKTHIYSTKNIEKGPWKSVSFTPCVGDHSLFFDNDGKVYLIYGGGKLNLLELNGNVTGVKEGGINQVAIENASAPSQVEGNVGGLGAEGSQLFKVKGKYYLFNITWPHGGMRTVVIHRADKITGPWEGRLALQDSGVAQGGLIDMPDGRWFAYLFRDYGSVGRIPYLVPVTWKDGWPVLGIDGKVPQTLELPAGKGLIPGIVSSDEFERKKGEPALPPVWQWNHNPDNSLWSVTERKGYLTLKTGRIDTSFLFARNTLTQRTIGPVCSGSVSLDVSKMKDGDFAGLGLLQKNFGLIGVSVDGNSKSIVMINASTGKPEKVQSIPLTQNTIFFKAACDFTNKKDVADFFYSLDGKTWKALGTQLKMAYTFPHFMGYRFALFNYATKITGGAAAFDFFHITDTIFINKKPIDNKISYDEKAVKFISDHYDPVCFLFKK

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
61 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
62 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
98 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
99 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
103 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
104 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
105 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
109 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
110 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
111 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
112 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
113 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
122 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
123 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
124 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
127 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
131 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
132 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
133 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
134 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
135 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
139 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
140 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
141 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
142 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
143 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
144 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
145 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
146 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
147 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
148 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
149 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
150 2738541283 Pedobacter sp. OK701 Isolate Unclassified
151 2738541302 Pedobacter sp. CF074 Isolate Unclassified
152 2818991437 Pedobacter terrae 518 Isolate Unclassified
153 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
154 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
155 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
156 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
157 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
158 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
159 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
160 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
161 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
162 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
163 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.16
Metatranscriptomes 0
Isolates 6.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.55
Nodule 0
Rhizoplane 0.43
Rhizosphere 84.62
Stem 0
Stem Tuber 0
Unclassified 1.28

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0002940 3300044712 Bacteria 39970
2 SwRhRL2b_contig_3403467 2162886007 Bacteria 12443
3 JGI24740J21852_10016862 3300001979 Bacteria 2628
4 JGI24739J22299_10028178 3300001989 Bacteria 1960
5 JGI24735J21928_10000002 3300002067 Bacteria 624895
6 JGI24751J29686_10006099 3300002459 Bacteria 2453
7 rootH1_10005922 3300003316 Bacteria 19957
8 rootH2_10169403 3300003320 Bacteria 12427
9 rootL2_10039126 3300003322 Bacteria 6951
10 Ga0055531_10000067 3300003794 Bacteria 114289
11 Ga0065714_10003247 3300005288 Bacteria 22761
12 Ga0065714_10064484 3300005288 Bacteria 52741
13 Ga0065714_10064725 3300005288 Bacteria 20956
14 Ga0065704_10000211 3300005289 Bacteria 91007
15 Ga0070683_100005037 3300005329 Bacteria 10967
16 Ga0070670_100035646 3300005331 Bacteria 4282
17 Ga0070666_10000052 3300005335 Bacteria 99095
18 Ga0070689_100043770 3300005340 Bacteria 3442
19 Ga0070661_100003187 3300005344 Bacteria 11306
20 Ga0070669_100038864 3300005353 Bacteria 3456
21 Ga0070675_100033273 3300005354 Bacteria 4179
22 Ga0070671_100056144 3300005355 Bacteria 3276
23 Ga0070688_100045396 3300005365 Bacteria 2715
24 Ga0070659_100000273 3300005366 Bacteria 40388
25 Ga0070659_100093249 3300005366 Bacteria 2416
26 Ga0070667_100017361 3300005367 Bacteria 5964
27 Ga0070662_100000031 3300005457 Bacteria 79515
28 Ga0068867_100063126 3300005459 Bacteria 2753
29 Ga0070684_100011502 3300005535 Bacteria 7048
30 Ga0068853_100010157 3300005539 Bacteria 7605
31 Ga0070665_100000006 3300005548 Bacteria 718034
32 Ga0068855_100007189 3300005563 Bacteria 13511
33 Ga0068855_100034863 3300005563 Bacteria 5997
34 Ga0068855_100080582 3300005563 Bacteria 3775
35 Ga0070664_100005452 3300005564 Bacteria 10214
36 Ga0068857_100009779 3300005577 Bacteria 8328
37 Ga0068857_100053839 3300005577 Unclassified 3570
38 Ga0068856_100000343 3300005614 Bacteria 50941
39 Ga0068856_100002084 3300005614 Bacteria 20755
40 Ga0068852_100025301 3300005616 Bacteria 4808
41 Ga0068859_100000112 3300005617 Bacteria 77364
42 Ga0068859_100012601 3300005617 Bacteria 8504
43 Ga0068859_100083183 3300005617 Bacteria 3243
44 Ga0068861_100056368 3300005719 Bacteria 2999
45 Ga0068863_100000485 3300005841 Bacteria 40572
46 Ga0068863_100005146 3300005841 Bacteria 12903
47 Ga0068858_100003410 3300005842 Bacteria 15805
48 Ga0068860_100000096 3300005843 Bacteria 147838
49 Ga0068860_100003156 3300005843 Bacteria 17014
50 Ga0068860_100032853 3300005843 Bacteria 4984
51 Ga0075366_10011907 3300006195 Bacteria 4923
52 Ga0075366_10029100 3300006195 Bacteria 3244
53 Ga0097621_100002773 3300006237 Bacteria 11989
54 Ga0068871_100003983 3300006358 Bacteria 10211
55 Ga0097620_100000112 3300006931 Bacteria 77364
56 Ga0097620_100012601 3300006931 Bacteria 8504
57 Ga0097620_100083181 3300006931 Bacteria 3243
58 Ga0111539_10044139 3300009094 Bacteria 5341
59 Ga0105247_10000427 3300009101 Bacteria 35775
60 Ga0105247_10013347 3300009101 Bacteria 4931
61 Ga0114129_10001889 3300009147 Bacteria 28571
62 Ga0105241_10000789 3300009174 Bacteria 24075
63 Ga0105237_10002467 3300009545 Bacteria 22954
64 Ga0105237_10005174 3300009545 Bacteria 14756
65 Ga0105237_10005274 3300009545 Bacteria 14623
66 Ga0105237_10023950 3300009545 Bacteria 6248
67 Ga0105237_10047160 3300009545 Bacteria 4332
68 Ga0105249_10011724 3300009553 Bacteria 7708
69 Ga0105249_10167506 3300009553 Bacteria 2128
70 Ga0105239_10000036 3300010375 Bacteria 212090
71 Ga0105239_10015982 3300010375 Bacteria 8306
72 Ga0105239_10019137 3300010375 Bacteria 7567
73 Ga0157373_10000186 3300013100 Bacteria 51215
74 Ga0157373_10011283 3300013100 Bacteria 6573
75 Ga0157371_10000180 3300013102 Bacteria 92616
76 Ga0157371_10000764 3300013102 Bacteria 37161
77 Ga0157370_10000022 3300013104 Bacteria 163793
78 Ga0157370_10000144 3300013104 Bacteria 86782
79 Ga0157370_10000625 3300013104 Bacteria 44091
80 Ga0157370_10006726 3300013104 Bacteria 12614
81 Ga0157370_10022670 3300013104 Bacteria 6248
82 Ga0157369_10000015 3300013105 Bacteria 262917
83 Ga0157378_10170232 3300013297 Bacteria 2042
84 Ga0163162_10004208 3300013306 Bacteria 13834
85 Ga0163162_10308100 3300013306 Bacteria 1716
86 Ga0157372_10001831 3300013307 Bacteria 23034
87 Ga0157372_10028930 3300013307 Bacteria 6046
88 Ga0157372_10030645 3300013307 Bacteria 5885
89 Ga0157372_10117731 3300013307 Bacteria 3047
90 Ga0157375_10018512 3300013308 Bacteria 6318
91 Ga0182008_10000168 3300014497 Bacteria 51118
92 Ga0157376_10049477 3300014969 Bacteria 3482
93 Ga0182006_1000135 3300015261 Bacteria 79175
94 Ga0182006_1000215 3300015261 Bacteria 56244
95 Ga0182007_10000010 3300015262 Bacteria 286070
96 Ga0183373_1001 3300015682 Bacteria 1410374
97 Ga0163161_10006265 3300017792 Bacteria 8235
98 Ga0163161_10008497 3300017792 Bacteria 7111
99 Ga0209258_100068 3300025242 Bacteria 286288
100 Ga0209148_1000259 3300025254 Bacteria 82912
101 Ga0209257_1000005 3300025304 Bacteria 1592528
102 Ga0207710_10002922 3300025900 Bacteria 7768
103 Ga0207710_10038176 3300025900 Bacteria 2123
104 Ga0207680_10000035 3300025903 Bacteria 73889
105 Ga0207647_10000081 3300025904 Bacteria 71603
106 Ga0207647_10037121 3300025904 Bacteria 3091
107 Ga0207654_10002322 3300025911 Bacteria 9768
108 Ga0207654_10002416 3300025911 Bacteria 9540
109 Ga0207695_10033510 3300025913 Bacteria 5600
110 Ga0207671_10001064 3300025914 Bacteria 33326
111 Ga0207671_10002429 3300025914 Bacteria 19951
112 Ga0207671_10013703 3300025914 Bacteria 6441
113 Ga0207671_10026145 3300025914 Bacteria 4377
114 Ga0207649_10023473 3300025920 Bacteria 3573
115 Ga0207650_10060262 3300025925 Bacteria 2832
116 Ga0207650_10101334 3300025925 Bacteria 2217
117 Ga0207690_10000363 3300025932 Bacteria 30085
118 Ga0207706_10000124 3300025933 Bacteria 83568
119 Ga0207670_10020431 3300025936 Bacteria 4069
120 Ga0207691_10003985 3300025940 Bacteria 14344
121 Ga0207689_10000760 3300025942 Bacteria 30926
122 Ga0207661_10122817 3300025944 Bacteria 2213
123 Ga0207679_10006198 3300025945 Bacteria 7548
124 Ga0207667_10006795 3300025949 Bacteria 13816
125 Ga0207667_10022857 3300025949 Bacteria 6897
126 Ga0207667_10044671 3300025949 Bacteria 4694
127 Ga0207651_10147621 3300025960 Unclassified 1826
128 Ga0207712_10010022 3300025961 Bacteria 6006
129 Ga0207712_10150438 3300025961 Bacteria 1797
130 Ga0207658_10030527 3300025986 Bacteria 3817
131 Ga0207703_10004420 3300026035 Bacteria 11551
132 Ga0207639_10009938 3300026041 Bacteria 6574
133 Ga0207702_10006748 3300026078 Bacteria 9854
134 Ga0207702_10008498 3300026078 Bacteria 8659
135 Ga0207641_10000089 3300026088 Bacteria 128603
136 Ga0207641_10000434 3300026088 Bacteria 47935
137 Ga0207648_10049348 3300026089 Bacteria 3683
138 Ga0207674_10002307 3300026116 Bacteria 24170
139 Ga0207674_10025172 3300026116 Bacteria 6350
140 Ga0207675_100003656 3300026118 Bacteria 14991
141 Ga0207698_10006371 3300026142 Bacteria 7355
142 Ga0207698_10017757 3300026142 Bacteria 4836
143 Ga0268266_10000010 3300028379 Bacteria 1030233
144 Ga0268264_10000109 3300028381 Bacteria 208477
145 Ga0268264_10011485 3300028381 Bacteria 7314
146 Ga0268264_10017946 3300028381 Bacteria 5789
147 Ga0268264_10023609 3300028381 Bacteria 5015
148 Ga0307515_10040600 3300028794 Bacteria 7352
149 Ga0307515_10088989 3300028794 Bacteria 3894
150 Ga0316177_1217319 3300030731 Bacteria 3058
151 Ga0316183_1128168 3300030742 Bacteria 20846
152 Ga0316181_1195270 3300030744 Bacteria 9387
153 Ga0265316_10007990 3300031344 Bacteria 9881
154 Ga0307405_10000013 3300031731 Bacteria 227563
155 Ga0307407_10000024 3300031903 Bacteria 113716
156 Ga0307412_10000043 3300031911 Bacteria 166562
157 Ga0307416_100000037 3300032002 Bacteria 137513
158 Ga0307414_10001189 3300032004 Bacteria 13372
159 Ga0307414_10005503 3300032004 Bacteria 6981
160 Ga0307414_10006070 3300032004 Bacteria 6700
161 Ga0307414_10044034 3300032004 Bacteria 3044
162 Ga0395899_0000001 3300037312 Bacteria 1750322
163 Ga0395901_0170138 3300038443 Bacteria 2286
164 Ga0439445_0014779 3300042004 Bacteria 1905
165 Ga0450894_004838 3300042131 Bacteria 1742
166 Ga0450899_001349 3300042135 Bacteria 2761
167 Ga0439434_0001577 3300042435 Bacteria 6582
168 Ga0466969_0000083 3300044656 Bacteria 49836
169 Ga0453683_0000186 3300044673 Bacteria 86082
170 Ga0453683_0003563 3300044673 Bacteria 11434
171 Ga0453684_0020922 3300044712 Bacteria 9817
172 Ga0453684_0025123 3300044712 Bacteria 8665
173 Ga0453684_0041623 3300044712 Bacteria 6209
174 Ga0453684_0070142 3300044712 Bacteria 4440
175 Ga0451576_0000504 3300045051 Bacteria 85668
176 Ga0451576_0001210 3300045051 Bacteria 46059
177 Ga0451576_0014789 3300045051 Bacteria 8674
178 Ga0495592_0129936 3300046454 Bacteria 1763
179 Ga0495638_0097671 3300046460 Bacteria 1761
180 Ga0495650_0000057 3300046471 Bacteria 303569
181 Ga0495606_0000010 3300046507 Bacteria 299893
182 Ga0495610_0000888 3300046512 Bacteria 27794
183 Ga0495616_0004310 3300046513 Bacteria 8988
184 Ga0495633_0000015 3300046558 Bacteria 254484
185 Ga0495633_0000732 3300046558 Bacteria 29698
186 Ga0495611_0000182 3300046648 Bacteria 44769
187 Ga0495625_0000003 3300046660 Bacteria 686847
188 Ga0495625_0001454 3300046660 Bacteria 28754
189 Ga0495625_0019847 3300046660 Bacteria 5201
190 Ga0495625_0174693 3300046660 Unclassified 1432
191 Ga0495661_0001280 3300046665 Bacteria 21554
192 Ga0495649_0000002 3300046694 Bacteria 1093458
193 Ga0495672_0026935 3300047320 Bacteria 3660
194 Ga0495687_001020 3300047443 Bacteria 27944
195 Ga0495687_013316 3300047443 Bacteria 4304
196 Ga0495686_0044066 3300047472 Bacteria 2825
197 Ga0496125_0016076 3300048928 Bacteria 7203
198 Ga0501300_002460 3300049523 Bacteria 2771
199 Ga0501217_001415 3300049661 Bacteria 4489
200 Ga0501223_000765 3300049663 Bacteria 7647
201 Ga0501225_0000109 3300049705 Bacteria 25558
202 Ga0501264_000558 3300049761 Bacteria 5412
203 nmdc:mga0k408_1328_c2 3300050493 Bacteria 7420
204 nmdc:mga0k408_168_c1 3300050493 Bacteria 7109
205 nmdc:mga0k408_57766_c1 3300050493 Bacteria 2253
206 nmdc:mga05p37_8456_c1 3300050507 Bacteria 10911
207 nmdc:mga08y16_134807_c1 3300050511 Bacteria 2566
208 Ga0500646_0000513 3300053090 Bacteria 11387
209 Ga0500569_000199 3300053109 Bacteria 9545
210 Ga0500608_002017 3300053122 Bacteria 7276
211 Ga0500618_000036 3300053125 Bacteria 118803
212 Ga0500559_0017867 3300053136 Bacteria 2998
213 Ga0500604_0002380 3300053151 Bacteria 5143
214 Ga0500616_0008884 3300053153 Bacteria 6172
215 Ga0500622_0000006 3300053156 Bacteria 464021
216 Ga0500624_000769 3300053157 Bacteria 7674
217 Ga0500637_0008390 3300053178 Bacteria 5208
218 Ga0500656_002049 3300053732 Bacteria 1795
219 2599478172 2599185184 Bacteria 6430550
220 2738755123 2738541283 Bacteria 7222293
221 2738852095 2738541302 Bacteria 5944758
222 2819546636 2818991437 Bacteria 5805520
223 2842723077 2842722452 Bacteria 6263924
224 2842907576 2842903701 Bacteria 6986368
225 2842914031 2842909656 Bacteria 6185908
226 2910246174 2910245624 Bacteria 6935613
227 2928080127 2928078545 Bacteria 6534839
228 2928149703 2928147474 Bacteria 6512076
229 2929183068 2929177148 Bacteria 7883697
230 2932083526 2932082852 Bacteria 6563563
231 2932087884 2932082852 Bacteria 6563563
232 2945979019 2945977869 Bacteria 7777518
233 2946015118 2946013367 Bacteria 7766675
234 2954016685 2954016120 Bacteria 6446024
235 Ga0453684_0002940
236 SwRhRL2b_contig_3403467
237 JGI24740J21852_10016862
238 JGI24739J22299_10028178
239 JGI24735J21928_10000002
240 JGI24751J29686_10006099
241 rootH1_10005922
242 rootH2_10169403
243 rootL2_10039126
244 Ga0055531_10000067
245 Ga0065714_10003247
246 Ga0065714_10064484
247 Ga0065714_10064725
248 Ga0065704_10000211
249 Ga0070683_100005037
250 Ga0070670_100035646
251 Ga0070666_10000052
252 Ga0070689_100043770
253 Ga0070661_100003187
254 Ga0070669_100038864
255 Ga0070675_100033273
256 Ga0070671_100056144
257 Ga0070688_100045396
258 Ga0070659_100000273
259 Ga0070659_100093249
260 Ga0070667_100017361
261 Ga0070662_100000031
262 Ga0068867_100063126
263 Ga0070684_100011502
264 Ga0068853_100010157
265 Ga0070665_100000006
266 Ga0068855_100007189
267 Ga0068855_100034863
268 Ga0068855_100080582
269 Ga0070664_100005452
270 Ga0068857_100009779
271 Ga0068857_100053839
272 Ga0068856_100000343
273 Ga0068856_100002084
274 Ga0068852_100025301
275 Ga0068859_100000112
276 Ga0068859_100012601
277 Ga0068859_100083183
278 Ga0068861_100056368
279 Ga0068863_100000485
280 Ga0068863_100005146
281 Ga0068858_100003410
282 Ga0068860_100000096
283 Ga0068860_100003156
284 Ga0068860_100032853
285 Ga0075366_10011907
286 Ga0075366_10029100
287 Ga0097621_100002773
288 Ga0068871_100003983
289 Ga0097620_100000112
290 Ga0097620_100012601
291 Ga0097620_100083181
292 Ga0111539_10044139
293 Ga0105247_10000427
294 Ga0105247_10013347
295 Ga0114129_10001889
296 Ga0105241_10000789
297 Ga0105237_10002467
298 Ga0105237_10005174
299 Ga0105237_10005274
300 Ga0105237_10023950
301 Ga0105237_10047160
302 Ga0105249_10011724
303 Ga0105249_10167506
304 Ga0105239_10000036
305 Ga0105239_10015982
306 Ga0105239_10019137
307 Ga0157373_10000186
308 Ga0157373_10011283
309 Ga0157371_10000180
310 Ga0157371_10000764
311 Ga0157370_10000022
312 Ga0157370_10000144
313 Ga0157370_10000625
314 Ga0157370_10006726
315 Ga0157370_10022670
316 Ga0157369_10000015
317 Ga0157378_10170232
318 Ga0163162_10004208
319 Ga0163162_10308100
320 Ga0157372_10001831
321 Ga0157372_10028930
322 Ga0157372_10030645
323 Ga0157372_10117731
324 Ga0157375_10018512
325 Ga0182008_10000168
326 Ga0157376_10049477
327 Ga0182006_1000135
328 Ga0182006_1000215
329 Ga0182007_10000010
330 Ga0183373_1001
331 Ga0163161_10006265
332 Ga0163161_10008497
333 Ga0209258_100068
334 Ga0209148_1000259
335 Ga0209257_1000005
336 Ga0207710_10002922
337 Ga0207710_10038176
338 Ga0207680_10000035
339 Ga0207647_10000081
340 Ga0207647_10037121
341 Ga0207654_10002322
342 Ga0207654_10002416
343 Ga0207695_10033510
344 Ga0207671_10001064
345 Ga0207671_10002429
346 Ga0207671_10013703
347 Ga0207671_10026145
348 Ga0207649_10023473
349 Ga0207650_10060262
350 Ga0207650_10101334
351 Ga0207690_10000363
352 Ga0207706_10000124
353 Ga0207670_10020431
354 Ga0207691_10003985
355 Ga0207689_10000760
356 Ga0207661_10122817
357 Ga0207679_10006198
358 Ga0207667_10006795
359 Ga0207667_10022857
360 Ga0207667_10044671
361 Ga0207651_10147621
362 Ga0207712_10010022
363 Ga0207712_10150438
364 Ga0207658_10030527
365 Ga0207703_10004420
366 Ga0207639_10009938
367 Ga0207702_10006748
368 Ga0207702_10008498
369 Ga0207641_10000089
370 Ga0207641_10000434
371 Ga0207648_10049348
372 Ga0207674_10002307
373 Ga0207674_10025172
374 Ga0207675_100003656
375 Ga0207698_10006371
376 Ga0207698_10017757
377 Ga0268266_10000010
378 Ga0268264_10000109
379 Ga0268264_10011485
380 Ga0268264_10017946
381 Ga0268264_10023609
382 Ga0307515_10040600
383 Ga0307515_10088989
384 Ga0316177_1217319
385 Ga0316183_1128168
386 Ga0316181_1195270
387 Ga0265316_10007990
388 Ga0307405_10000013
389 Ga0307407_10000024
390 Ga0307412_10000043
391 Ga0307416_100000037
392 Ga0307414_10001189
393 Ga0307414_10005503
394 Ga0307414_10006070
395 Ga0307414_10044034
396 Ga0395899_0000001
397 Ga0395901_0170138
398 Ga0439445_0014779
399 Ga0450894_004838
400 Ga0450899_001349
401 Ga0439434_0001577
402 Ga0466969_0000083
403 Ga0453683_0000186
404 Ga0453683_0003563
405 Ga0453684_0020922
406 Ga0453684_0025123
407 Ga0453684_0041623
408 Ga0453684_0070142
409 Ga0451576_0000504
410 Ga0451576_0001210
411 Ga0451576_0014789
412 Ga0495592_0129936
413 Ga0495638_0097671
414 Ga0495650_0000057
415 Ga0495606_0000010
416 Ga0495610_0000888
417 Ga0495616_0004310
418 Ga0495633_0000015
419 Ga0495633_0000732
420 Ga0495611_0000182
421 Ga0495625_0000003
422 Ga0495625_0001454
423 Ga0495625_0019847
424 Ga0495625_0174693
425 Ga0495661_0001280
426 Ga0495649_0000002
427 Ga0495672_0026935
428 Ga0495687_001020
429 Ga0495687_013316
430 Ga0495686_0044066
431 Ga0496125_0016076
432 Ga0501300_002460
433 Ga0501217_001415
434 Ga0501223_000765
435 Ga0501225_0000109
436 Ga0501264_000558
437 nmdc:mga0k408_1328_c2
438 nmdc:mga0k408_168_c1
439 nmdc:mga0k408_57766_c1
440 nmdc:mga05p37_8456_c1
441 nmdc:mga08y16_134807_c1
442 Ga0500646_0000513
443 Ga0500569_000199
444 Ga0500608_002017
445 Ga0500618_000036
446 Ga0500559_0017867
447 Ga0500604_0002380
448 Ga0500616_0008884
449 Ga0500622_0000006
450 Ga0500624_000769
451 Ga0500637_0008390
452 Ga0500656_002049
453 2599478172
454 2738755123
455 2738852095
456 2819546636
457 2842723077
458 2842907576
459 2842914031
460 2910246174
461 2928080127
462 2928149703
463 2929183068
464 2932083526
465 2932087884
466 2945979019
467 2946015118
468 2954016685

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17851

GH43_C2

Beta xylosidase C-terminal Concanavalin A-like domain

325

520

0.88

PF04616

Glyco_hydro_43

Glycosyl hydrolases family 43

26

298

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
6mly-assembly4.cif.gz_D bifunctional gh43-ce bacteroides eggerthii, bacegg_01304 0.9881 26 520
6mly-assembly1.cif.gz_A bifunctional gh43-ce bacteroides eggerthii, bacegg_01304 0.9841 27 520
6mly-assembly4.cif.gz_D bifunctional gh43-ce bacteroides eggerthii, bacegg_01304 0.9285 26 520
3zxj-assembly1.cif.gz_A engineering the active site of a gh43 glycoside hydrolase generates a biotechnologically significant enzyme that displays both endo- xylanase and exo-arabinofuranosidase activity 0.8682 23 520
3zxk-assembly1.cif.gz_A engineering the active site of a gh43 glycoside hydrolase generates a biotechnologically significant enzyme that displays both endo- xylanase and exo-arabinofuranosidase activity 0.8658 28 520
ID Description Score Start End Superfamily
3zxjB02 Mainly Beta;Sandwich;Jelly Rolls; 0.8712 323 515 2.60.120.200
5z5iA02 Mainly Beta;Sandwich;Jelly Rolls; 0.85 321 520 2.60.120.200
5z5iA02 Mainly Beta;Sandwich;Jelly Rolls; 0.8461 321 520 2.60.120.200
5jozB02 Mainly Beta;Sandwich;Jelly Rolls; 0.843 322 520 2.60.120.200
5joyA02 Mainly Beta;Sandwich;Jelly Rolls; 0.8421 321 520 2.60.120.200
ID Description Score Start End GO Terms
AF-A0A3D2HF01-F1-model_v4 deleted 0.9916 25 518
AF-A0A519UG81-F1-model_v4 Glycoside hydrolase 0.9911 102 466 GO:0004553
GO:0005975
AF-A0A4Q6BBP7-F1-model_v4 Glycoside hydrolase 0.9906 99 523 GO:0004553
GO:0005975
AF-A0A066WUQ4-F1-model_v4 Glycoside hydrolase 0.9902 50 518 GO:0004553
GO:0005975
AF-A0A519XSX9-F1-model_v4 Glycosyl hydrolase 43 family protein 0.9892 26 253 GO:0004553
GO:0005975

Map