F346853
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 234 | 162 | 468 | 266 |
Family's Representative Sequence
| Representative Sequence | 3300005458|Ga0070681_10000550|Ga0070681_100005501 |
| Length | 302 |
| Sequence | VRIATWNVNSVGARLPRLNEWLELVEPDVLCLQETKIAGDQFPAERAEELGYEVEANGDGRWNGVAILSRIGLTDVVKNFPGQPPYAPPADEDDPALIGKPPAVEARAIGATCGPLRVWSVYVPNGRSLDSPHYPYKLEWLAALKTALEPEVESGQPFVLMGDFNIAPTDKDVWDPAAFVDSTHVTDAERSAYKALVDLGLVDLDARALKGDHPFTYWDYRAGMFHKDLGMRIDLVLATGAVADRVKAAWVDRQARKGTLPSDHAPVIVDLDEAPDGNIGPVVPPPSAPAARRGAFKLPQSG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 6 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 9 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 25 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 26 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 28 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 29 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 30 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 32 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 33 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 45 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 46 | 3300020610 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 47 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 48 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 49 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 69 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 70 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 71 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 72 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 73 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 74 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 75 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 76 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 77 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 78 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 79 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 80 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 81 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 82 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 83 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 84 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 85 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 86 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 87 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 88 | 3300041443 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG | Metagenome | Rhizoplane |
| 89 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 90 | 3300041459 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG | Metagenome | Rhizoplane |
| 91 | 3300041486 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG | Metagenome | Rhizoplane |
| 92 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 93 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 94 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 95 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 96 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 97 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 98 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 99 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 100 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 101 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 102 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 103 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 104 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 105 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 120 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 121 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 122 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 123 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 124 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 125 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 126 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 127 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 128 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 129 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 130 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 131 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 132 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 133 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 134 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 137 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 140 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 145 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 146 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 148 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 149 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 150 | 2675903058 | Actinopolymorpha cephalotaxi CPCC 202808 | Isolate | Rhizosphere |
| 151 | 2675903060 | Nonomuraea wenchangensis CGMCC 4.5598 | Isolate | Rhizosphere |
| 152 | 2775506925 | Saccharopolyspora phatthalungensis NRRL B-24798 | Isolate | Rhizosphere |
| 153 | 2818991472 | Kitasatospora viridis DSM 44826 | Isolate | Rhizosphere |
| 154 | 2827628540 | Actinopolymorpha cephalotaxi DSM 45117 | Isolate | Rhizosphere |
| 155 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 156 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 157 | 2863067949 | Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) | Isolate | Rhizosphere |
| 158 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 159 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 160 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 161 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
| 162 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.88 |
| Metatranscriptomes | 1.71 |
| Isolates | 6.41 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.85 |
| Nodule | 0.43 |
| Rhizoplane | 10.26 |
| Rhizosphere | 79.91 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.43 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070681_10000550 | 3300005458 | Bacteria | 30983 |
| 2 | Ga0070658_10000291 | 3300005327 | Bacteria | 43798 |
| 3 | Ga0070658_10005555 | 3300005327 | Bacteria | 10228 |
| 4 | Ga0070658_10054333 | 3300005327 | Bacteria | 3252 |
| 5 | Ga0070683_100100076 | 3300005329 | Bacteria | 2729 |
| 6 | Ga0070683_100366466 | 3300005329 | Unclassified | 1372 |
| 7 | Ga0070670_100285226 | 3300005331 | Bacteria | 1442 |
| 8 | Ga0068869_100062957 | 3300005334 | Bacteria | 2724 |
| 9 | Ga0070680_100000507 | 3300005336 | Bacteria | 26782 |
| 10 | Ga0070680_100047130 | 3300005336 | Bacteria | 3509 |
| 11 | Ga0070680_100163298 | 3300005336 | Bacteria | 1872 |
| 12 | Ga0070682_100105930 | 3300005337 | Bacteria | 1865 |
| 13 | Ga0068868_100023668 | 3300005338 | Bacteria | 4651 |
| 14 | Ga0068868_100540132 | 3300005338 | Bacteria | 1026 |
| 15 | Ga0070660_100047215 | 3300005339 | Bacteria | 3303 |
| 16 | Ga0070660_100049099 | 3300005339 | Bacteria | 3243 |
| 17 | Ga0070692_10035392 | 3300005345 | Bacteria | 2528 |
| 18 | Ga0070659_100000218 | 3300005366 | Bacteria | 44263 |
| 19 | Ga0070667_100082886 | 3300005367 | Bacteria | 2746 |
| 20 | Ga0070709_10000488 | 3300005434 | Bacteria | 23401 |
| 21 | Ga0070709_10120530 | 3300005434 | Bacteria | 1777 |
| 22 | Ga0070714_100029807 | 3300005435 | Bacteria | 4538 |
| 23 | Ga0070713_100006121 | 3300005436 | Bacteria | 8303 |
| 24 | Ga0070713_100031404 | 3300005436 | Bacteria | 4230 |
| 25 | Ga0070710_10003646 | 3300005437 | Bacteria | 7287 |
| 26 | Ga0070708_100170646 | 3300005445 | Bacteria | 2031 |
| 27 | Ga0070663_100331206 | 3300005455 | Bacteria | 1227 |
| 28 | Ga0070681_10000459 | 3300005458 | Bacteria | 33341 |
| 29 | Ga0070681_10019092 | 3300005458 | Bacteria | 6860 |
| 30 | Ga0070681_10025887 | 3300005458 | Bacteria | 5897 |
| 31 | Ga0070699_100174856 | 3300005518 | Bacteria | 1904 |
| 32 | Ga0070679_100000045 | 3300005530 | Bacteria | 93900 |
| 33 | Ga0070679_100014984 | 3300005530 | Bacteria | 7449 |
| 34 | Ga0070684_100197322 | 3300005535 | Bacteria | 1833 |
| 35 | Ga0070684_100428733 | 3300005535 | Bacteria | 1221 |
| 36 | Ga0070686_100160291 | 3300005544 | Bacteria | 1584 |
| 37 | Ga0070686_100452538 | 3300005544 | Bacteria | 987 |
| 38 | Ga0068856_100015201 | 3300005614 | Bacteria | 7436 |
| 39 | Ga0068860_100152749 | 3300005843 | Bacteria | 2224 |
| 40 | Ga0081539_10000289 | 3300005985 | Bacteria | 113859 |
| 41 | Ga0070717_10070702 | 3300006028 | Bacteria | 2909 |
| 42 | Ga0075365_10002044 | 3300006038 | Bacteria | 9607 |
| 43 | Ga0075365_10008496 | 3300006038 | Bacteria | 5839 |
| 44 | Ga0075365_10018044 | 3300006038 | Bacteria | 4331 |
| 45 | Ga0075364_10177321 | 3300006051 | Bacteria | 1442 |
| 46 | Ga0070715_10044477 | 3300006163 | Bacteria | 1877 |
| 47 | Ga0070716_100029875 | 3300006173 | Bacteria | 2951 |
| 48 | Ga0070712_100282976 | 3300006175 | Bacteria | 1336 |
| 49 | Ga0075362_10143252 | 3300006177 | Bacteria | 1143 |
| 50 | Ga0114129_10173503 | 3300009147 | Bacteria | 2938 |
| 51 | Ga0105243_10176985 | 3300009148 | Bacteria | 1852 |
| 52 | Ga0105237_10177971 | 3300009545 | Bacteria | 2127 |
| 53 | Ga0105238_10809081 | 3300009551 | Bacteria | 953 |
| 54 | Ga0157371_10191410 | 3300013102 | Bacteria | 1465 |
| 55 | Ga0157370_10168316 | 3300013104 | Bacteria | 2037 |
| 56 | Ga0157369_10000382 | 3300013105 | Bacteria | 58643 |
| 57 | Ga0157369_10013517 | 3300013105 | Bacteria | 9226 |
| 58 | Ga0157369_10044673 | 3300013105 | Bacteria | 4821 |
| 59 | Ga0157369_10150123 | 3300013105 | Bacteria | 2463 |
| 60 | Ga0157369_10376365 | 3300013105 | Bacteria | 1474 |
| 61 | Ga0157372_10244379 | 3300013307 | Bacteria | 2083 |
| 62 | Ga0157375_10623677 | 3300013308 | Bacteria | 1236 |
| 63 | Ga0163163_10396139 | 3300014325 | Bacteria | 1439 |
| 64 | Ga0163161_10190584 | 3300017792 | Bacteria | 1576 |
| 65 | Ga0206354_11067663 | 3300020081 | Bacteria | 5796 |
| 66 | Ga0206353_10173218 | 3300020082 | Bacteria | 2047 |
| 67 | Ga0206353_10646648 | 3300020082 | Bacteria | 15994 |
| 68 | Ga0154015_1553999 | 3300020610 | Bacteria | 1094 |
| 69 | Ga0213872_10000574 | 3300021361 | Bacteria | 28437 |
| 70 | Ga0213876_10001943 | 3300021384 | Bacteria | 12399 |
| 71 | Ga0207699_10000025 | 3300025906 | Bacteria | 166197 |
| 72 | Ga0207705_10004689 | 3300025909 | Bacteria | 10310 |
| 73 | Ga0207705_10081988 | 3300025909 | Bacteria | 2352 |
| 74 | Ga0207707_10000114 | 3300025912 | Bacteria | 81766 |
| 75 | Ga0207707_10006122 | 3300025912 | Bacteria | 10515 |
| 76 | Ga0207707_10162052 | 3300025912 | Bacteria | 1955 |
| 77 | Ga0207671_10137888 | 3300025914 | Bacteria | 1877 |
| 78 | Ga0207693_10003435 | 3300025915 | Bacteria | 13516 |
| 79 | Ga0207663_10019274 | 3300025916 | Bacteria | 3839 |
| 80 | Ga0207660_10000460 | 3300025917 | Bacteria | 26861 |
| 81 | Ga0207660_10009568 | 3300025917 | Bacteria | 6273 |
| 82 | Ga0207660_10010290 | 3300025917 | Bacteria | 6065 |
| 83 | Ga0207660_10132324 | 3300025917 | Bacteria | 1900 |
| 84 | Ga0207657_10151529 | 3300025919 | Bacteria | 1888 |
| 85 | Ga0207657_10158885 | 3300025919 | Bacteria | 1837 |
| 86 | Ga0207652_10000075 | 3300025921 | Bacteria | 107831 |
| 87 | Ga0207652_10000130 | 3300025921 | Bacteria | 81049 |
| 88 | Ga0207652_10014844 | 3300025921 | Bacteria | 6316 |
| 89 | Ga0207652_10057899 | 3300025921 | Bacteria | 3338 |
| 90 | Ga0207700_10000663 | 3300025928 | Bacteria | 20156 |
| 91 | Ga0207664_10009586 | 3300025929 | Bacteria | 6802 |
| 92 | Ga0207664_10054983 | 3300025929 | Bacteria | 3157 |
| 93 | Ga0207690_10000933 | 3300025932 | Bacteria | 18694 |
| 94 | Ga0207690_10190303 | 3300025932 | Bacteria | 1552 |
| 95 | Ga0207661_10057057 | 3300025944 | Bacteria | 3138 |
| 96 | Ga0207661_11217097 | 3300025944 | Bacteria | 693 |
| 97 | Ga0207658_10490556 | 3300025986 | Bacteria | 1093 |
| 98 | Ga0207677_10044444 | 3300026023 | Bacteria | 2960 |
| 99 | Ga0207678_10367462 | 3300026067 | Bacteria | 1242 |
| 100 | Ga0207702_10018675 | 3300026078 | Bacteria | 5735 |
| 101 | Ga0207675_100083376 | 3300026118 | Bacteria | 2998 |
| 102 | Ga0268264_10125858 | 3300028381 | Bacteria | 2265 |
| 103 | Ga0268264_10408889 | 3300028381 | Bacteria | 1306 |
| 104 | Ga0265338_10069390 | 3300028800 | Bacteria | 3028 |
| 105 | Ga0265325_10007502 | 3300031241 | Bacteria | 6520 |
| 106 | Ga0265340_10003488 | 3300031247 | Bacteria | 8858 |
| 107 | Ga0265339_10060145 | 3300031249 | Bacteria | 2048 |
| 108 | Ga0265316_10040990 | 3300031344 | Bacteria | 3710 |
| 109 | Ga0265314_10039421 | 3300031711 | Bacteria | 3403 |
| 110 | Ga0265342_10042127 | 3300031712 | Bacteria | 2760 |
| 111 | Ga0373934_0012423 | 3300035086 | Bacteria | 3215 |
| 112 | Ga0373953_0045693 | 3300035117 | Bacteria | 1756 |
| 113 | Ga0373954_0138399 | 3300035118 | Bacteria | 1187 |
| 114 | Ga0373956_0009356 | 3300035119 | Bacteria | 3985 |
| 115 | Ga0373924_0134847 | 3300035410 | Bacteria | 1075 |
| 116 | Ga0373933_0015851 | 3300035724 | Bacteria | 4207 |
| 117 | Ga0373933_0033216 | 3300035724 | Bacteria | 3000 |
| 118 | Ga0373937_0058945 | 3300036401 | Bacteria | 3527 |
| 119 | Ga0373937_0548180 | 3300036401 | Bacteria | 1098 |
| 120 | Ga0395900_0059983 | 3300037418 | Bacteria | 3916 |
| 121 | Ga0395900_0085774 | 3300037418 | Bacteria | 3236 |
| 122 | Ga0395898_0080102 | 3300037466 | Bacteria | 3150 |
| 123 | Ga0395905_0054700 | 3300037471 | Bacteria | 3735 |
| 124 | Ga0395901_0002136 | 3300038443 | Bacteria | 20242 |
| 125 | Ga0436365_0909690 | 3300039437 | Bacteria | 2778 |
| 126 | Ga0436365_1235482 | 3300039437 | Bacteria | 54275 |
| 127 | Ga0436361_0147510 | 3300039447 | Bacteria | 46306 |
| 128 | Ga0451789_0075388 | 3300041443 | Bacteria | 1774 |
| 129 | Ga0451789_0471595 | 3300041443 | Bacteria | 2418 |
| 130 | Ga0451791_1820055 | 3300041451 | Bacteria | 1747 |
| 131 | Ga0451800_0867075 | 3300041459 | Bacteria | 1235 |
| 132 | Ga0451807_2124381 | 3300041486 | Bacteria | 1659 |
| 133 | Ga0451837_0931923 | 3300041494 | Bacteria | 2544 |
| 134 | Ga0451837_1307293 | 3300041494 | Bacteria | 1970 |
| 135 | Ga0451853_3236960 | 3300041512 | Bacteria | 1059 |
| 136 | Ga0439448_0086373 | 3300042005 | Bacteria | 1057 |
| 137 | Ga0451577_0002373 | 3300042876 | Bacteria | 22595 |
| 138 | Ga0466965_0156586 | 3300044683 | Bacteria | 1193 |
| 139 | Ga0466966_0120920 | 3300044684 | Bacteria | 1608 |
| 140 | Ga0466966_0260204 | 3300044684 | Bacteria | 1045 |
| 141 | Ga0466961_0049579 | 3300044693 | Bacteria | 2683 |
| 142 | Ga0466961_0049985 | 3300044693 | Bacteria | 2671 |
| 143 | Ga0466961_0054700 | 3300044693 | Bacteria | 2545 |
| 144 | Ga0466961_0073661 | 3300044693 | Bacteria | 2166 |
| 145 | Ga0466961_0195609 | 3300044693 | Bacteria | 1252 |
| 146 | Ga0466963_0050465 | 3300044694 | Bacteria | 2754 |
| 147 | Ga0466963_0060889 | 3300044694 | Bacteria | 2522 |
| 148 | Ga0466963_0084564 | 3300044694 | Bacteria | 2153 |
| 149 | Ga0453684_0012121 | 3300044712 | Bacteria | 14306 |
| 150 | Ga0466971_0148787 | 3300044719 | Bacteria | 1092 |
| 151 | Ga0466959_0187600 | 3300045049 | Bacteria | 1444 |
| 152 | Ga0466958_0011368 | 3300045836 | Bacteria | 5014 |
| 153 | Ga0466958_0041756 | 3300045836 | Bacteria | 2760 |
| 154 | Ga0466967_0009830 | 3300045976 | Bacteria | 7135 |
| 155 | Ga0466967_0023083 | 3300045976 | Bacteria | 5092 |
| 156 | Ga0466967_0578321 | 3300045976 | Bacteria | 1107 |
| 157 | Ga0466967_0641543 | 3300045976 | Bacteria | 1050 |
| 158 | Ga0495592_0211379 | 3300046454 | Bacteria | 1302 |
| 159 | Ga0495651_0132313 | 3300046462 | Bacteria | 1819 |
| 160 | Ga0495653_0023782 | 3300046463 | Bacteria | 4946 |
| 161 | Ga0495608_0022811 | 3300046511 | Bacteria | 4294 |
| 162 | Ga0495630_0348342 | 3300046517 | Bacteria | 1134 |
| 163 | Ga0495652_0051854 | 3300046529 | Bacteria | 3501 |
| 164 | Ga0495587_0012987 | 3300046536 | Bacteria | 5237 |
| 165 | Ga0495635_0233989 | 3300046663 | Bacteria | 1241 |
| 166 | Ga0495657_0043882 | 3300046675 | Bacteria | 3045 |
| 167 | Ga0495599_0054172 | 3300046678 | Bacteria | 2513 |
| 168 | Ga0495623_0040171 | 3300046679 | Bacteria | 2988 |
| 169 | Ga0495623_0134050 | 3300046679 | Bacteria | 1480 |
| 170 | Ga0495600_0083286 | 3300046809 | Bacteria | 2088 |
| 171 | Ga0495680_0040048 | 3300047322 | Bacteria | 3734 |
| 172 | Ga0495602_0009980 | 3300048088 | Bacteria | 9852 |
| 173 | Ga0495602_0045178 | 3300048088 | Bacteria | 3988 |
| 174 | Ga0496100_0249013 | 3300048903 | Bacteria | 1314 |
| 175 | Ga0496100_0266467 | 3300048903 | Bacteria | 1272 |
| 176 | Ga0496101_0540600 | 3300048904 | Bacteria | 921 |
| 177 | Ga0496104_0001373 | 3300048907 | Bacteria | 21053 |
| 178 | Ga0496105_0011660 | 3300048908 | Bacteria | 6955 |
| 179 | Ga0496106_0150262 | 3300048909 | Bacteria | 1837 |
| 180 | Ga0496108_0000975 | 3300048911 | Bacteria | 22275 |
| 181 | Ga0496108_0226669 | 3300048911 | Bacteria | 1624 |
| 182 | Ga0496109_0018862 | 3300048912 | Bacteria | 6071 |
| 183 | Ga0496109_0453823 | 3300048912 | Bacteria | 1211 |
| 184 | Ga0496109_0741817 | 3300048912 | Bacteria | 920 |
| 185 | Ga0496110_0313030 | 3300048913 | Bacteria | 1430 |
| 186 | Ga0496111_0075930 | 3300048914 | Bacteria | 2449 |
| 187 | Ga0496112_0003470 | 3300048915 | Bacteria | 13040 |
| 188 | Ga0496113_0039419 | 3300048916 | Bacteria | 3477 |
| 189 | Ga0496114_0015692 | 3300048917 | Bacteria | 6094 |
| 190 | Ga0496114_0160562 | 3300048917 | Bacteria | 1954 |
| 191 | Ga0496114_0190592 | 3300048917 | Bacteria | 1794 |
| 192 | Ga0496115_0178822 | 3300048918 | Bacteria | 1754 |
| 193 | Ga0496121_0005590 | 3300048924 | Bacteria | 16053 |
| 194 | Ga0496126_0139428 | 3300048929 | Bacteria | 2089 |
| 195 | Ga0501032_0015492 | 3300049569 | Bacteria | 5376 |
| 196 | Ga0501037_0117959 | 3300049573 | Bacteria | 1909 |
| 197 | Ga0501043_0436503 | 3300049579 | Bacteria | 986 |
| 198 | Ga0501069_0004518 | 3300049585 | Bacteria | 7187 |
| 199 | Ga0501070_0003018 | 3300049586 | Bacteria | 14655 |
| 200 | Ga0501070_0008674 | 3300049586 | Bacteria | 8595 |
| 201 | Ga0501070_0028367 | 3300049586 | Bacteria | 4695 |
| 202 | Ga0501070_0068264 | 3300049586 | Bacteria | 2943 |
| 203 | Ga0501070_0212131 | 3300049586 | Bacteria | 1589 |
| 204 | Ga0501070_0271676 | 3300049586 | Bacteria | 1384 |
| 205 | Ga0501073_0274650 | 3300049589 | Bacteria | 1163 |
| 206 | Ga0501073_0302052 | 3300049589 | Bacteria | 1104 |
| 207 | Ga0501074_0055820 | 3300049590 | Bacteria | 2846 |
| 208 | Ga0501079_0032265 | 3300049741 | Bacteria | 4026 |
| 209 | Ga0501080_0008339 | 3300049742 | Bacteria | 9383 |
| 210 | Ga0501080_0034762 | 3300049742 | Bacteria | 4706 |
| 211 | Ga0501080_0060144 | 3300049742 | Bacteria | 3535 |
| 212 | Ga0501044_0031502 | 3300049823 | Bacteria | 5581 |
| 213 | Ga0501044_0086987 | 3300049823 | Bacteria | 3157 |
| 214 | Ga0501044_0488283 | 3300049823 | Bacteria | 1134 |
| 215 | nmdc:mga00v17_102817_c1 | 3300050491 | Bacteria | 1805 |
| 216 | nmdc:mga00v17_300033_c1 | 3300050491 | Bacteria | 1043 |
| 217 | nmdc:mga06z11_141975_c1 | 3300050494 | Bacteria | 1358 |
| 218 | nmdc:mga05p37_145433_c1 | 3300050507 | Bacteria | 2903 |
| 219 | Ga0500643_001854 | 3300053087 | Bacteria | 11539 |
| 220 | 2515755408 | 2515154137 | Bacteria | 5711575 |
| 221 | 2516090044 | 2515154203 | Bacteria | 5458536 |
| 222 | 2676477210 | 2675903058 | Bacteria | 6822861 |
| 223 | 2676488677 | 2675903060 | Bacteria | 10051191 |
| 224 | 2776377070 | 2775506925 | Bacteria | 7237746 |
| 225 | 2819739202 | 2818991472 | Bacteria | 10089953 |
| 226 | 2827633616 | 2827628540 | Bacteria | 6858585 |
| 227 | 2855687096 | 2855683550 | Bacteria | 7134265 |
| 228 | 2856861839 | 2856858025 | Bacteria | 7255264 |
| 229 | 2863073358 | 2863067949 | Bacteria | 8541735 |
| 230 | 2866555007 | 2866552031 | Bacteria | 5824618 |
| 231 | 2899365310 | 2899359706 | Bacteria | 10940472 |
| 232 | 649812443 | 649633069 | Bacteria | 6962533 |
| 233 | 8055413794 | 8055412473 | Bacteria | 6257500 |
| 234 | 8056209562 | 8056207758 | Bacteria | 8639239 |
| 235 | Ga0070681_10000550 | |||
| 236 | Ga0070658_10000291 | |||
| 237 | Ga0070658_10005555 | |||
| 238 | Ga0070658_10054333 | |||
| 239 | Ga0070683_100100076 | |||
| 240 | Ga0070683_100366466 | |||
| 241 | Ga0070670_100285226 | |||
| 242 | Ga0068869_100062957 | |||
| 243 | Ga0070680_100000507 | |||
| 244 | Ga0070680_100047130 | |||
| 245 | Ga0070680_100163298 | |||
| 246 | Ga0070682_100105930 | |||
| 247 | Ga0068868_100023668 | |||
| 248 | Ga0068868_100540132 | |||
| 249 | Ga0070660_100047215 | |||
| 250 | Ga0070660_100049099 | |||
| 251 | Ga0070692_10035392 | |||
| 252 | Ga0070659_100000218 | |||
| 253 | Ga0070667_100082886 | |||
| 254 | Ga0070709_10000488 | |||
| 255 | Ga0070709_10120530 | |||
| 256 | Ga0070714_100029807 | |||
| 257 | Ga0070713_100006121 | |||
| 258 | Ga0070713_100031404 | |||
| 259 | Ga0070710_10003646 | |||
| 260 | Ga0070708_100170646 | |||
| 261 | Ga0070663_100331206 | |||
| 262 | Ga0070681_10000459 | |||
| 263 | Ga0070681_10019092 | |||
| 264 | Ga0070681_10025887 | |||
| 265 | Ga0070699_100174856 | |||
| 266 | Ga0070679_100000045 | |||
| 267 | Ga0070679_100014984 | |||
| 268 | Ga0070684_100197322 | |||
| 269 | Ga0070684_100428733 | |||
| 270 | Ga0070686_100160291 | |||
| 271 | Ga0070686_100452538 | |||
| 272 | Ga0068856_100015201 | |||
| 273 | Ga0068860_100152749 | |||
| 274 | Ga0081539_10000289 | |||
| 275 | Ga0070717_10070702 | |||
| 276 | Ga0075365_10002044 | |||
| 277 | Ga0075365_10008496 | |||
| 278 | Ga0075365_10018044 | |||
| 279 | Ga0075364_10177321 | |||
| 280 | Ga0070715_10044477 | |||
| 281 | Ga0070716_100029875 | |||
| 282 | Ga0070712_100282976 | |||
| 283 | Ga0075362_10143252 | |||
| 284 | Ga0114129_10173503 | |||
| 285 | Ga0105243_10176985 | |||
| 286 | Ga0105237_10177971 | |||
| 287 | Ga0105238_10809081 | |||
| 288 | Ga0157371_10191410 | |||
| 289 | Ga0157370_10168316 | |||
| 290 | Ga0157369_10000382 | |||
| 291 | Ga0157369_10013517 | |||
| 292 | Ga0157369_10044673 | |||
| 293 | Ga0157369_10150123 | |||
| 294 | Ga0157369_10376365 | |||
| 295 | Ga0157372_10244379 | |||
| 296 | Ga0157375_10623677 | |||
| 297 | Ga0163163_10396139 | |||
| 298 | Ga0163161_10190584 | |||
| 299 | Ga0206354_11067663 | |||
| 300 | Ga0206353_10173218 | |||
| 301 | Ga0206353_10646648 | |||
| 302 | Ga0154015_1553999 | |||
| 303 | Ga0213872_10000574 | |||
| 304 | Ga0213876_10001943 | |||
| 305 | Ga0207699_10000025 | |||
| 306 | Ga0207705_10004689 | |||
| 307 | Ga0207705_10081988 | |||
| 308 | Ga0207707_10000114 | |||
| 309 | Ga0207707_10006122 | |||
| 310 | Ga0207707_10162052 | |||
| 311 | Ga0207671_10137888 | |||
| 312 | Ga0207693_10003435 | |||
| 313 | Ga0207663_10019274 | |||
| 314 | Ga0207660_10000460 | |||
| 315 | Ga0207660_10009568 | |||
| 316 | Ga0207660_10010290 | |||
| 317 | Ga0207660_10132324 | |||
| 318 | Ga0207657_10151529 | |||
| 319 | Ga0207657_10158885 | |||
| 320 | Ga0207652_10000075 | |||
| 321 | Ga0207652_10000130 | |||
| 322 | Ga0207652_10014844 | |||
| 323 | Ga0207652_10057899 | |||
| 324 | Ga0207700_10000663 | |||
| 325 | Ga0207664_10009586 | |||
| 326 | Ga0207664_10054983 | |||
| 327 | Ga0207690_10000933 | |||
| 328 | Ga0207690_10190303 | |||
| 329 | Ga0207661_10057057 | |||
| 330 | Ga0207661_11217097 | |||
| 331 | Ga0207658_10490556 | |||
| 332 | Ga0207677_10044444 | |||
| 333 | Ga0207678_10367462 | |||
| 334 | Ga0207702_10018675 | |||
| 335 | Ga0207675_100083376 | |||
| 336 | Ga0268264_10125858 | |||
| 337 | Ga0268264_10408889 | |||
| 338 | Ga0265338_10069390 | |||
| 339 | Ga0265325_10007502 | |||
| 340 | Ga0265340_10003488 | |||
| 341 | Ga0265339_10060145 | |||
| 342 | Ga0265316_10040990 | |||
| 343 | Ga0265314_10039421 | |||
| 344 | Ga0265342_10042127 | |||
| 345 | Ga0373934_0012423 | |||
| 346 | Ga0373953_0045693 | |||
| 347 | Ga0373954_0138399 | |||
| 348 | Ga0373956_0009356 | |||
| 349 | Ga0373924_0134847 | |||
| 350 | Ga0373933_0015851 | |||
| 351 | Ga0373933_0033216 | |||
| 352 | Ga0373937_0058945 | |||
| 353 | Ga0373937_0548180 | |||
| 354 | Ga0395900_0059983 | |||
| 355 | Ga0395900_0085774 | |||
| 356 | Ga0395898_0080102 | |||
| 357 | Ga0395905_0054700 | |||
| 358 | Ga0395901_0002136 | |||
| 359 | Ga0436365_0909690 | |||
| 360 | Ga0436365_1235482 | |||
| 361 | Ga0436361_0147510 | |||
| 362 | Ga0451789_0075388 | |||
| 363 | Ga0451789_0471595 | |||
| 364 | Ga0451791_1820055 | |||
| 365 | Ga0451800_0867075 | |||
| 366 | Ga0451807_2124381 | |||
| 367 | Ga0451837_0931923 | |||
| 368 | Ga0451837_1307293 | |||
| 369 | Ga0451853_3236960 | |||
| 370 | Ga0439448_0086373 | |||
| 371 | Ga0451577_0002373 | |||
| 372 | Ga0466965_0156586 | |||
| 373 | Ga0466966_0120920 | |||
| 374 | Ga0466966_0260204 | |||
| 375 | Ga0466961_0049579 | |||
| 376 | Ga0466961_0049985 | |||
| 377 | Ga0466961_0054700 | |||
| 378 | Ga0466961_0073661 | |||
| 379 | Ga0466961_0195609 | |||
| 380 | Ga0466963_0050465 | |||
| 381 | Ga0466963_0060889 | |||
| 382 | Ga0466963_0084564 | |||
| 383 | Ga0453684_0012121 | |||
| 384 | Ga0466971_0148787 | |||
| 385 | Ga0466959_0187600 | |||
| 386 | Ga0466958_0011368 | |||
| 387 | Ga0466958_0041756 | |||
| 388 | Ga0466967_0009830 | |||
| 389 | Ga0466967_0023083 | |||
| 390 | Ga0466967_0578321 | |||
| 391 | Ga0466967_0641543 | |||
| 392 | Ga0495592_0211379 | |||
| 393 | Ga0495651_0132313 | |||
| 394 | Ga0495653_0023782 | |||
| 395 | Ga0495608_0022811 | |||
| 396 | Ga0495630_0348342 | |||
| 397 | Ga0495652_0051854 | |||
| 398 | Ga0495587_0012987 | |||
| 399 | Ga0495635_0233989 | |||
| 400 | Ga0495657_0043882 | |||
| 401 | Ga0495599_0054172 | |||
| 402 | Ga0495623_0040171 | |||
| 403 | Ga0495623_0134050 | |||
| 404 | Ga0495600_0083286 | |||
| 405 | Ga0495680_0040048 | |||
| 406 | Ga0495602_0009980 | |||
| 407 | Ga0495602_0045178 | |||
| 408 | Ga0496100_0249013 | |||
| 409 | Ga0496100_0266467 | |||
| 410 | Ga0496101_0540600 | |||
| 411 | Ga0496104_0001373 | |||
| 412 | Ga0496105_0011660 | |||
| 413 | Ga0496106_0150262 | |||
| 414 | Ga0496108_0000975 | |||
| 415 | Ga0496108_0226669 | |||
| 416 | Ga0496109_0018862 | |||
| 417 | Ga0496109_0453823 | |||
| 418 | Ga0496109_0741817 | |||
| 419 | Ga0496110_0313030 | |||
| 420 | Ga0496111_0075930 | |||
| 421 | Ga0496112_0003470 | |||
| 422 | Ga0496113_0039419 | |||
| 423 | Ga0496114_0015692 | |||
| 424 | Ga0496114_0160562 | |||
| 425 | Ga0496114_0190592 | |||
| 426 | Ga0496115_0178822 | |||
| 427 | Ga0496121_0005590 | |||
| 428 | Ga0496126_0139428 | |||
| 429 | Ga0501032_0015492 | |||
| 430 | Ga0501037_0117959 | |||
| 431 | Ga0501043_0436503 | |||
| 432 | Ga0501069_0004518 | |||
| 433 | Ga0501070_0003018 | |||
| 434 | Ga0501070_0008674 | |||
| 435 | Ga0501070_0028367 | |||
| 436 | Ga0501070_0068264 | |||
| 437 | Ga0501070_0212131 | |||
| 438 | Ga0501070_0271676 | |||
| 439 | Ga0501073_0274650 | |||
| 440 | Ga0501073_0302052 | |||
| 441 | Ga0501074_0055820 | |||
| 442 | Ga0501079_0032265 | |||
| 443 | Ga0501080_0008339 | |||
| 444 | Ga0501080_0034762 | |||
| 445 | Ga0501080_0060144 | |||
| 446 | Ga0501044_0031502 | |||
| 447 | Ga0501044_0086987 | |||
| 448 | Ga0501044_0488283 | |||
| 449 | nmdc:mga00v17_102817_c1 | |||
| 450 | nmdc:mga00v17_300033_c1 | |||
| 451 | nmdc:mga06z11_141975_c1 | |||
| 452 | nmdc:mga05p37_145433_c1 | |||
| 453 | Ga0500643_001854 | |||
| 454 | 2515755408 | |||
| 455 | 2516090044 | |||
| 456 | 2676477210 | |||
| 457 | 2676488677 | |||
| 458 | 2776377070 | |||
| 459 | 2819739202 | |||
| 460 | 2827633616 | |||
| 461 | 2855687096 | |||
| 462 | 2856861839 | |||
| 463 | 2863073358 | |||
| 464 | 2866555007 | |||
| 465 | 2899365310 | |||
| 466 | 649812443 | |||
| 467 | 8055413794 | |||
| 468 | 8056209562 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2jc4-assembly1.cif.gz_A | 3'-5' exonuclease (nexo) from neisseria meningitidis | 0.9427 | 1 | 273 |
| 2jc4-assembly1.cif.gz_A | 3'-5' exonuclease (nexo) from neisseria meningitidis | 0.9391 | 1 | 273 |
| 6fke-assembly1.cif.gz_A | structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin | 0.9376 | 2 | 273 |
| 2voa-assembly1.cif.gz_B | structure of an ap endonuclease from archaeoglobus fulgidus | 0.9312 | 1 | 273 |
| 6fke-assembly1.cif.gz_A | structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin | 0.9269 | 2 | 273 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P96273_24_289_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9481 | 1 | 271 | 3.60.10.10 |
| af_P96273_24_289_3.60.10.10 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9412 | 1 | 271 | 3.60.10.10 |
| 6fk4A00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.934 | 2 | 273 | 3.60.10.10 |
| 2voaB00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9301 | 1 | 273 | 3.60.10.10 |
| 6fk4A00 | Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase | 0.9234 | 2 | 273 | 3.60.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1C5JR03-F1-model_v4 | Exodeoxyribonuclease III | 0.9904 | 2 | 273 |
GO:0003677
GO:0004519 GO:0006281 GO:0008311 GO:0046872 |
| AF-A0A7Y2SI63-F1-model_v4 | deleted | 0.984 | 1 | 273 |
|
| AF-A0A6A0AX08-F1-model_v4 | Exodeoxyribonuclease III | 0.9838 | 1 | 273 |
GO:0006281
GO:0008311 GO:0046872 |
| AF-A0A7K2G4Z9-F1-model_v4 | Exodeoxyribonuclease III (EC 3.1.11.2) | 0.9825 | 1 | 273 |
GO:0006281
GO:0008311 GO:0046872 |
| AF-A0A6B2UPV5-F1-model_v4 | Exodeoxyribonuclease III (EC 3.1.11.2) | 0.9812 | 1 | 273 |
GO:0006281
GO:0008311 GO:0046872 |