F346618

General Info

Members Datasets Scaffolds Average Seq Length
233 162 466 257

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2935638405|2935640302
Length 305
Sequence QAAEIRQSPEPSDIRTLGASSNTGAMKARPGWLRFLRQHPTVAVGGLILFLIVAAAIAAPLLGTTDPTRVNTIMRARPPSALHLFGTDALGRDLYSRVLYGARISLLVGFAVAFLSSMGGLAIGLFAGFSRSADAIAMRVMDGLMSIPPILLAVALMALNRGSVGNVIFAITIAELPRVARLVRGVVLSLREQPYVDAAVTSGTSLPRIVLMHILPNTIAPMIVQATYICASAMITEAILSFIGAGTPPTVPSWGNIMAEARALWQVKFYIVMFPALFLSLTVLAVNLVGDGLRDALDPRLAKNL

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
58 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
87 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
88 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
89 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
90 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
91 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
96 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
97 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
98 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
99 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
108 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
145 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
146 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 2935638405 Bradyrhizobium sp. JR19.8 Isolate Nodule
149 2643221679 Angustibacter sp. Root456 Isolate Unclassified
150 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
151 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
152 2841760612 Bosea sp. Tri-49 Isolate Nodule
153 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
154 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
155 2844104063 Bosea sp. Tri-39 Isolate Nodule
156 2851246043 Bosea sp. Tri-54 Isolate Nodule
157 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
158 2891633521 Azoarcus rhizosphaerae CC-YHH848 Isolate Rhizosphere
159 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
160 2935665750 Bradyrhizobium sp. JR7.2 Isolate Nodule
161 2935801545 Bradyrhizobium sp. RT10b Isolate Nodule
162 2935827899 Bradyrhizobium sp. RT4a Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.56
Metatranscriptomes 0
Isolates 6.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.16
Nodule 4.29
Rhizoplane 5.15
Rhizosphere 75.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000015 3300003187 Bacteria 250420
2 JGI25153J46596_10002158 3300003215 Bacteria 11509
3 JGI25160J50197_1035236 3300003354 Bacteria 1230
4 Ga0055526_1002569 3300003771 Bacteria 12172
5 Ga0055524_1000051 3300003775 Bacteria 146215
6 Ga0055524_1029467 3300003775 Bacteria 1622
7 Ga0065165_1008960 3300005262 Bacteria 4581
8 Ga0070683_100236508 3300005329 Bacteria 1737
9 Ga0070670_100447861 3300005331 Bacteria 1144
10 Ga0068868_100037989 3300005338 Bacteria 3736
11 Ga0070700_100058003 3300005441 Bacteria 2431
12 Ga0070708_100019914 3300005445 Bacteria 5647
13 Ga0070708_100022961 3300005445 Bacteria 5299
14 Ga0070708_100135465 3300005445 Bacteria 2281
15 Ga0070708_100220858 3300005445 Bacteria 1777
16 Ga0070708_100660986 3300005445 Bacteria 984
17 Ga0070706_100019893 3300005467 Bacteria 6189
18 Ga0070706_100060609 3300005467 Bacteria 3493
19 Ga0070706_100116254 3300005467 Bacteria 2491
20 Ga0070706_100364332 3300005467 Bacteria 1347
21 Ga0070706_100419756 3300005467 Bacteria 1245
22 Ga0070707_100109650 3300005468 Bacteria 2677
23 Ga0070698_100010588 3300005471 Bacteria 9825
24 Ga0070698_100019125 3300005471 Bacteria 7200
25 Ga0070698_100122901 3300005471 Bacteria 2554
26 Ga0070699_100007094 3300005518 Bacteria 9731
27 Ga0070699_100008668 3300005518 Bacteria 8814
28 Ga0070699_100016277 3300005518 Bacteria 6386
29 Ga0070697_100004097 3300005536 Bacteria 11173
30 Ga0070697_100022778 3300005536 Bacteria 4978
31 Ga0070665_100008804 3300005548 Bacteria 10217
32 Ga0070665_100542817 3300005548 Bacteria 1175
33 Ga0070704_100041949 3300005549 Bacteria 3162
34 Ga0070704_100056176 3300005549 Bacteria 2794
35 Ga0070704_100538038 3300005549 Bacteria 1019
36 Ga0068856_100185505 3300005614 Bacteria 2094
37 Ga0068856_100411926 3300005614 Bacteria 1371
38 Ga0068866_10132423 3300005718 Bacteria 1420
39 Ga0068861_100258250 3300005719 Bacteria 1490
40 Ga0068858_100248343 3300005842 Bacteria 1690
41 Ga0081455_10000022 3300005937 Bacteria 159620
42 Ga0081540_1000185 3300005983 Bacteria 64858
43 Ga0081540_1001040 3300005983 Bacteria 24821
44 Ga0081539_10004676 3300005985 Bacteria 14854
45 Ga0075365_10017456 3300006038 Bacteria 4391
46 Ga0075432_10031321 3300006058 Bacteria 1841
47 Ga0070716_100028472 3300006173 Bacteria 3010
48 Ga0075362_10059349 3300006177 Bacteria 1727
49 Ga0075367_10008666 3300006178 Bacteria 5276
50 Ga0097621_100129105 3300006237 Bacteria 2150
51 Ga0075428_100004753 3300006844 Bacteria 15038
52 Ga0075428_100005476 3300006844 Bacteria 14111
53 Ga0075430_100040020 3300006846 Bacteria 3968
54 Ga0075431_100003207 3300006847 Bacteria 15825
55 Ga0075431_100003603 3300006847 Bacteria 15002
56 Ga0075433_10003008 3300006852 Bacteria 12947
57 Ga0075433_10146813 3300006852 Bacteria 2097
58 Ga0075433_10189352 3300006852 Bacteria 1830
59 Ga0075434_100001365 3300006871 Bacteria 20484
60 Ga0075434_100022624 3300006871 Bacteria 6120
61 Ga0075434_100488878 3300006871 Bacteria 1252
62 Ga0075429_100046911 3300006880 Bacteria 3759
63 Ga0075436_100000875 3300006914 Bacteria 19991
64 Ga0075436_100096482 3300006914 Bacteria 2057
65 Ga0075435_100133699 3300007076 Bacteria 2077
66 Ga0075435_100159429 3300007076 Bacteria 1900
67 Ga0111539_10589010 3300009094 Bacteria 1295
68 Ga0111539_10604124 3300009094 Bacteria 1277
69 Ga0105245_10005455 3300009098 Bacteria 11172
70 Ga0105245_10196984 3300009098 Bacteria 1933
71 Ga0114129_10000002 3300009147 Bacteria 204413
72 Ga0114129_10001450 3300009147 Bacteria 32002
73 Ga0114129_10015355 3300009147 Bacteria 10896
74 Ga0114129_10051838 3300009147 Bacteria 5760
75 Ga0105242_10033206 3300009176 Bacteria 4131
76 Ga0105248_10023056 3300009177 Bacteria 6914
77 Ga0105248_10050010 3300009177 Bacteria 4687
78 Ga0105237_10135147 3300009545 Bacteria 2461
79 Ga0105238_10052633 3300009551 Bacteria 4093
80 Ga0105238_10103008 3300009551 Bacteria 2836
81 Ga0105249_10108113 3300009553 Bacteria 2625
82 Ga0105249_10288385 3300009553 Bacteria 1642
83 Ga0105239_10032948 3300010375 Bacteria 5692
84 Ga0157369_10685194 3300013105 Bacteria 1056
85 Ga0171462_1025 3300013250 Bacteria 125470
86 Ga0163162_10294525 3300013306 Bacteria 1754
87 Ga0163161_10059573 3300017792 Bacteria 2777
88 Ga0209673_1033481 3300025273 Bacteria 1566
89 Ga0209675_1007529 3300025291 Bacteria 4159
90 Ga0209025_1000010 3300025294 Bacteria 986612
91 Ga0209025_1052515 3300025294 Bacteria 1608
92 Ga0209564_1000048 3300025295 Bacteria 364806
93 Ga0209758_1000082 3300025297 Bacteria 258835
94 Ga0209256_1000041 3300025299 Bacteria 364827
95 Ga0209256_1000109 3300025299 Bacteria 184928
96 Ga0209256_1000296 3300025299 Bacteria 87135
97 Ga0207426_1007993 3300025302 Bacteria 4345
98 Ga0209257_1049564 3300025304 Bacteria 1194
99 Ga0207684_10005858 3300025910 Bacteria 11254
100 Ga0207684_10012543 3300025910 Bacteria 7365
101 Ga0207684_10087945 3300025910 Bacteria 2647
102 Ga0207684_10126489 3300025910 Bacteria 2193
103 Ga0207671_10093650 3300025914 Bacteria 2266
104 Ga0207652_10035079 3300025921 Bacteria 4232
105 Ga0207646_10003307 3300025922 Bacteria 18333
106 Ga0207646_10201706 3300025922 Bacteria 1797
107 Ga0207646_10430823 3300025922 Bacteria 1190
108 Ga0207694_10122542 3300025924 Bacteria 2077
109 Ga0207687_10025061 3300025927 Bacteria 3991
110 Ga0207706_10129725 3300025933 Bacteria 2217
111 Ga0207686_10008536 3300025934 Bacteria 5534
112 Ga0207670_10416125 3300025936 Bacteria 1077
113 Ga0207691_10156500 3300025940 Bacteria 2001
114 Ga0207711_10174035 3300025941 Bacteria 1955
115 Ga0207689_10260645 3300025942 Bacteria 1434
116 Ga0207661_10079423 3300025944 Bacteria 2704
117 Ga0207712_10164600 3300025961 Bacteria 1727
118 Ga0207703_10155630 3300026035 Bacteria 1997
119 Ga0207708_10082538 3300026075 Bacteria 2471
120 Ga0207674_10358581 3300026116 Bacteria 1409
121 Ga0207675_100065279 3300026118 Bacteria 3402
122 Ga0207675_100079076 3300026118 Bacteria 3082
123 Ga0209588_1053392 3300027671 Bacteria 1307
124 Ga0207428_10014235 3300027907 Bacteria 6919
125 Ga0268266_10013706 3300028379 Bacteria 6981
126 Ga0265318_10024932 3300028577 Bacteria 2366
127 Ga0265332_10030925 3300031238 Bacteria 2336
128 Ga0265320_10047564 3300031240 Bacteria 2097
129 Ga0265325_10013637 3300031241 Bacteria 4620
130 Ga0265329_10005008 3300031242 Bacteria 5415
131 Ga0265340_10058219 3300031247 Bacteria 1855
132 Ga0265331_10013929 3300031250 Bacteria 4301
133 Ga0265316_10074759 3300031344 Bacteria 2607
134 Ga0307513_10008330 3300031456 Bacteria 13276
135 Ga0265342_10057305 3300031712 Bacteria 2306
136 Ga0307516_10127575 3300031730 Bacteria 2327
137 Ga0307409_100122527 3300031995 Bacteria 2205
138 Ga0307414_10349872 3300032004 Bacteria 1268
139 Ga0307411_10247812 3300032005 Bacteria 1399
140 Ga0373940_0040193 3300035088 Bacteria 1283
141 Ga0373952_0045248 3300035092 Bacteria 1031
142 Ga0373961_0017127 3300035241 Bacteria 1875
143 Ga0373931_0050899 3300035691 Bacteria 2205
144 Ga0373927_0254544 3300035695 Bacteria 1154
145 Ga0373925_0216432 3300037068 Bacteria 1528
146 Ga0395899_0004974 3300037312 Bacteria 10342
147 Ga0395900_0014808 3300037418 Bacteria 7947
148 Ga0395900_0033753 3300037418 Bacteria 5266
149 Ga0395900_0161760 3300037418 Bacteria 2283
150 Ga0395898_0017248 3300037466 Bacteria 7373
151 Ga0395905_0469057 3300037471 Bacteria 1158
152 Ga0395901_0026885 3300038443 Bacteria 5907
153 Ga0395901_0038181 3300038443 Bacteria 4968
154 Ga0400483_119183 3300039062 Bacteria 1311
155 Ga0400483_126321 3300039062 Bacteria 3817
156 Ga0400483_218323 3300039062 Bacteria 3677
157 Ga0466957_0027716 3300044842 Bacteria 3368
158 Ga0451576_0466732 3300045051 Bacteria 1326
159 Ga0466967_0555606 3300045976 Bacteria 1130
160 Ga0495648_0062670 3300046524 Bacteria 2200
161 Ga0496102_0002758 3300048905 Bacteria 14979
162 Ga0496104_0033459 3300048907 Bacteria 4788
163 Ga0496105_0009421 3300048908 Bacteria 7637
164 Ga0496108_0365915 3300048911 Bacteria 1259
165 Ga0496109_0167395 3300048912 Bacteria 2061
166 Ga0496110_0014409 3300048913 Bacteria 6563
167 Ga0496111_0026841 3300048914 Bacteria 4069
168 Ga0496112_0291621 3300048915 Bacteria 1577
169 Ga0496113_0018234 3300048916 Bacteria 4887
170 Ga0496114_0011374 3300048917 Bacteria 7108
171 Ga0496115_0137126 3300048918 Bacteria 2018
172 Ga0496115_0284336 3300048918 Bacteria 1357
173 Ga0496126_0030312 3300048929 Bacteria 5126
174 Ga0501033_0338167 3300049570 Bacteria 1056
175 Ga0501034_0002156 3300049571 Bacteria 24429
176 Ga0501034_0002363 3300049571 Bacteria 22920
177 Ga0501034_0022016 3300049571 Bacteria 6493
178 Ga0501034_0285385 3300049571 Bacteria 1590
179 Ga0501034_0290786 3300049571 Bacteria 1572
180 Ga0501043_0041660 3300049579 Bacteria 3608
181 Ga0501046_0109042 3300049580 Bacteria 2117
182 Ga0501068_0002402 3300049584 Bacteria 9946
183 Ga0501072_0000788 3300049588 Bacteria 23263
184 Ga0501081_0011710 3300049743 Bacteria 5741
185 Ga0501035_0273216 3300049822 Bacteria 1430
186 Ga0501044_0020334 3300049823 Bacteria 7087
187 Ga0501044_0201493 3300049823 Bacteria 1948
188 nmdc:mga0yw44_12778_c1 3300050492 Bacteria 4391
189 nmdc:mga06z11_35907_c1 3300050494 Bacteria 2443
190 nmdc:mga05p37_119298_c1 3300050507 Bacteria 3241
191 nmdc:mga05p37_17336_c1 3300050507 Bacteria 8689
192 nmdc:mga05p37_17782_c1 3300050507 Bacteria 8578
193 nmdc:mga05p37_186723_c1 3300050507 Bacteria 2520
194 nmdc:mga05p37_91106_c1 3300050507 Bacteria 3757
195 nmdc:mga09592_7318_c1 3300050508 Bacteria 8974
196 nmdc:mga09592_80341_c1 3300050508 Bacteria 2777
197 nmdc:mga0qj67_27516_c1 3300050509 Bacteria 4408
198 nmdc:mga06r32_8227_c1 3300050510 Bacteria 9390
199 nmdc:mga06r32_9773_c1 3300050510 Bacteria 8662
200 nmdc:mga08y16_120791_c1 3300050511 Bacteria 2727
201 nmdc:mga08y16_195097_c1 3300050511 Bacteria 2099
202 nmdc:mga08y16_366384_c1 3300050511 Bacteria 1479
203 nmdc:mga0n895_21570_c1 3300050512 Bacteria 6027
204 nmdc:mga0n895_55204_c1 3300050512 Bacteria 3910
205 nmdc:mga0n895_697_c1 3300050512 Bacteria 23592
206 nmdc:mga0n895_90620_c1 3300050512 Bacteria 3060
207 nmdc:mga0rr50_144693_c1 3300050513 Bacteria 1915
208 nmdc:mga0rr50_55295_c1 3300050513 Bacteria 2961
209 nmdc:mga08x19_12193_c1 3300050514 Bacteria 5174
210 nmdc:mga08x19_14331_c1 3300050514 Bacteria 4809
211 nmdc:mga0a205_143717_c1 3300050515 Bacteria 2286
212 nmdc:mga0a205_293606_c1 3300050515 Bacteria 1500
213 nmdc:mga0a205_365669_c1 3300050515 Bacteria 1309
214 nmdc:mga0a205_809_c1 3300050515 Bacteria 25452
215 Ga0500647_0030581 3300053091 Bacteria 2558
216 Ga0500642_0207254 3300053130 Bacteria 911
217 Ga0500616_0002514 3300053153 Bacteria 15176
218 Ga0501084_0054658 3300054114 Bacteria 3340
219 2935640302 2935638405 Bacteria 10015038
220 2644445625 2643221679 Bacteria 3839507
221 2821127003 2821123053 Bacteria 7836056
222 2838740857 2838736955 Bacteria 5760694
223 2841764261 2841760612 Bacteria 6454112
224 2841844698 2841840854 Bacteria 5761912
225 2842144233 2842140634 Bacteria 5759631
226 2844108284 2844104063 Bacteria 6440972
227 2851250696 2851246043 Bacteria 6439203
228 2857536587 2857531043 Bacteria 6754041
229 2891635296 2891633521 Bacteria 4602265
230 2917705135 2917699015 Bacteria 7043791
231 2935666860 2935665750 Bacteria 9571747
232 2935808147 2935801545 Bacteria 9301974
233 2935829785 2935827899 Bacteria 10038562
234 JGI25151J46595_10000015
235 JGI25153J46596_10002158
236 JGI25160J50197_1035236
237 Ga0055526_1002569
238 Ga0055524_1000051
239 Ga0055524_1029467
240 Ga0065165_1008960
241 Ga0070683_100236508
242 Ga0070670_100447861
243 Ga0068868_100037989
244 Ga0070700_100058003
245 Ga0070708_100019914
246 Ga0070708_100022961
247 Ga0070708_100135465
248 Ga0070708_100220858
249 Ga0070708_100660986
250 Ga0070706_100019893
251 Ga0070706_100060609
252 Ga0070706_100116254
253 Ga0070706_100364332
254 Ga0070706_100419756
255 Ga0070707_100109650
256 Ga0070698_100010588
257 Ga0070698_100019125
258 Ga0070698_100122901
259 Ga0070699_100007094
260 Ga0070699_100008668
261 Ga0070699_100016277
262 Ga0070697_100004097
263 Ga0070697_100022778
264 Ga0070665_100008804
265 Ga0070665_100542817
266 Ga0070704_100041949
267 Ga0070704_100056176
268 Ga0070704_100538038
269 Ga0068856_100185505
270 Ga0068856_100411926
271 Ga0068866_10132423
272 Ga0068861_100258250
273 Ga0068858_100248343
274 Ga0081455_10000022
275 Ga0081540_1000185
276 Ga0081540_1001040
277 Ga0081539_10004676
278 Ga0075365_10017456
279 Ga0075432_10031321
280 Ga0070716_100028472
281 Ga0075362_10059349
282 Ga0075367_10008666
283 Ga0097621_100129105
284 Ga0075428_100004753
285 Ga0075428_100005476
286 Ga0075430_100040020
287 Ga0075431_100003207
288 Ga0075431_100003603
289 Ga0075433_10003008
290 Ga0075433_10146813
291 Ga0075433_10189352
292 Ga0075434_100001365
293 Ga0075434_100022624
294 Ga0075434_100488878
295 Ga0075429_100046911
296 Ga0075436_100000875
297 Ga0075436_100096482
298 Ga0075435_100133699
299 Ga0075435_100159429
300 Ga0111539_10589010
301 Ga0111539_10604124
302 Ga0105245_10005455
303 Ga0105245_10196984
304 Ga0114129_10000002
305 Ga0114129_10001450
306 Ga0114129_10015355
307 Ga0114129_10051838
308 Ga0105242_10033206
309 Ga0105248_10023056
310 Ga0105248_10050010
311 Ga0105237_10135147
312 Ga0105238_10052633
313 Ga0105238_10103008
314 Ga0105249_10108113
315 Ga0105249_10288385
316 Ga0105239_10032948
317 Ga0157369_10685194
318 Ga0171462_1025
319 Ga0163162_10294525
320 Ga0163161_10059573
321 Ga0209673_1033481
322 Ga0209675_1007529
323 Ga0209025_1000010
324 Ga0209025_1052515
325 Ga0209564_1000048
326 Ga0209758_1000082
327 Ga0209256_1000041
328 Ga0209256_1000109
329 Ga0209256_1000296
330 Ga0207426_1007993
331 Ga0209257_1049564
332 Ga0207684_10005858
333 Ga0207684_10012543
334 Ga0207684_10087945
335 Ga0207684_10126489
336 Ga0207671_10093650
337 Ga0207652_10035079
338 Ga0207646_10003307
339 Ga0207646_10201706
340 Ga0207646_10430823
341 Ga0207694_10122542
342 Ga0207687_10025061
343 Ga0207706_10129725
344 Ga0207686_10008536
345 Ga0207670_10416125
346 Ga0207691_10156500
347 Ga0207711_10174035
348 Ga0207689_10260645
349 Ga0207661_10079423
350 Ga0207712_10164600
351 Ga0207703_10155630
352 Ga0207708_10082538
353 Ga0207674_10358581
354 Ga0207675_100065279
355 Ga0207675_100079076
356 Ga0209588_1053392
357 Ga0207428_10014235
358 Ga0268266_10013706
359 Ga0265318_10024932
360 Ga0265332_10030925
361 Ga0265320_10047564
362 Ga0265325_10013637
363 Ga0265329_10005008
364 Ga0265340_10058219
365 Ga0265331_10013929
366 Ga0265316_10074759
367 Ga0307513_10008330
368 Ga0265342_10057305
369 Ga0307516_10127575
370 Ga0307409_100122527
371 Ga0307414_10349872
372 Ga0307411_10247812
373 Ga0373940_0040193
374 Ga0373952_0045248
375 Ga0373961_0017127
376 Ga0373931_0050899
377 Ga0373927_0254544
378 Ga0373925_0216432
379 Ga0395899_0004974
380 Ga0395900_0014808
381 Ga0395900_0033753
382 Ga0395900_0161760
383 Ga0395898_0017248
384 Ga0395905_0469057
385 Ga0395901_0026885
386 Ga0395901_0038181
387 Ga0400483_119183
388 Ga0400483_126321
389 Ga0400483_218323
390 Ga0466957_0027716
391 Ga0451576_0466732
392 Ga0466967_0555606
393 Ga0495648_0062670
394 Ga0496102_0002758
395 Ga0496104_0033459
396 Ga0496105_0009421
397 Ga0496108_0365915
398 Ga0496109_0167395
399 Ga0496110_0014409
400 Ga0496111_0026841
401 Ga0496112_0291621
402 Ga0496113_0018234
403 Ga0496114_0011374
404 Ga0496115_0137126
405 Ga0496115_0284336
406 Ga0496126_0030312
407 Ga0501033_0338167
408 Ga0501034_0002156
409 Ga0501034_0002363
410 Ga0501034_0022016
411 Ga0501034_0285385
412 Ga0501034_0290786
413 Ga0501043_0041660
414 Ga0501046_0109042
415 Ga0501068_0002402
416 Ga0501072_0000788
417 Ga0501081_0011710
418 Ga0501035_0273216
419 Ga0501044_0020334
420 Ga0501044_0201493
421 nmdc:mga0yw44_12778_c1
422 nmdc:mga06z11_35907_c1
423 nmdc:mga05p37_119298_c1
424 nmdc:mga05p37_17336_c1
425 nmdc:mga05p37_17782_c1
426 nmdc:mga05p37_186723_c1
427 nmdc:mga05p37_91106_c1
428 nmdc:mga09592_7318_c1
429 nmdc:mga09592_80341_c1
430 nmdc:mga0qj67_27516_c1
431 nmdc:mga06r32_8227_c1
432 nmdc:mga06r32_9773_c1
433 nmdc:mga08y16_120791_c1
434 nmdc:mga08y16_195097_c1
435 nmdc:mga08y16_366384_c1
436 nmdc:mga0n895_21570_c1
437 nmdc:mga0n895_55204_c1
438 nmdc:mga0n895_697_c1
439 nmdc:mga0n895_90620_c1
440 nmdc:mga0rr50_144693_c1
441 nmdc:mga0rr50_55295_c1
442 nmdc:mga08x19_12193_c1
443 nmdc:mga08x19_14331_c1
444 nmdc:mga0a205_143717_c1
445 nmdc:mga0a205_293606_c1
446 nmdc:mga0a205_365669_c1
447 nmdc:mga0a205_809_c1
448 Ga0500647_0030581
449 Ga0500642_0207254
450 Ga0500616_0002514
451 Ga0501084_0054658
452 2935640302
453 2644445625
454 2821127003
455 2838740857
456 2841764261
457 2841844698
458 2842144233
459 2844108284
460 2851250696
461 2857536587
462 2891635296
463 2917705135
464 2935666860
465 2935808147
466 2935829785

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

99

303

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.4784 83 257
2v0x-assembly1.cif.gz_B the dimerization domain of lap2alpha 0.4502 146 272
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.4281 82 262
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.4213 82 262
3rlf-assembly1.cif.gz_G crystal structure of the maltose-binding protein/maltose transporter complex in an outward-facing conformation bound to mgamppnp 0.3931 85 261
ID Description Score Start End Superfamily
af_P0DP70_1_121_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7822 165 264 1.10.3720.10
af_Q2FVE9_63_269_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.7301 80 262 1.10.3720.10
af_P0AGH5_85_292_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6985 80 265 1.10.3720.10
af_L0TEV4_50_262_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6948 80 269 1.10.3720.10
af_P0AEG1_88_295_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.6883 80 266 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A3D5E2U2-F1-model_v4 Glutathione ABC transporter permease GsiD 0.7943 22 270 GO:0005886
GO:0055085
AF-A0A7Z9WA66-F1-model_v4 deleted 0.7889 18 271
AF-A0A561T131-F1-model_v4 Peptide/nickel transport system permease protein 0.7876 19 271 GO:0005886
GO:0055085
AF-A0A413G680-F1-model_v4 ABC transporter permease 0.7845 21 270 GO:0005886
GO:0055085
AF-A0A1N7D2X8-F1-model_v4 Peptide/nickel transport system permease protein 0.7842 34 272 GO:0005886
GO:0055085

Map