F346350

General Info

Members Datasets Scaffolds Average Seq Length
233 145 466 209

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0000151|Ga0451577_0000151_113861_114532
Length 223
Sequence MIVAIDGPAGSGKSTVARMVAEKLGFRYLDTGAMYRAVAFRALIDGTPLYDEEAVAKIAREEPIVFVHDGDDPIARRVLIGDMDVTKGIRTPSVDDAVSHVAKRRSVRDAMVEQQRVLGHQGDIVVEGRDIGTVVFPDADLKVFLTATPEERATRRAAEQSQSGHVVDPIGVRESMLRRDEIDSNREMSPLQPAEDSVLVDSTGLSIDQVVDLVVELAQARRG

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
28 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
29 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
47 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
48 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
49 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
52 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
55 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
56 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
57 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
58 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
76 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
77 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
78 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
79 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
80 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
99 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
100 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
101 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
102 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
120 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
123 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
124 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
127 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
138 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
142 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.42
Metatranscriptomes 2.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 5.15
Rhizosphere 94.42
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0000151 3300042876 Bacteria 153747
2 Ga0070658_10005470 3300005327 Bacteria 10301
3 Ga0070658_10080277 3300005327 Bacteria 2679
4 Ga0070683_100009889 3300005329 Bacteria 8174
5 Ga0070683_100100512 3300005329 Bacteria 2723
6 Ga0070683_100160123 3300005329 Bacteria 2135
7 Ga0070660_100013885 3300005339 Bacteria 5794
8 Ga0070660_100055610 3300005339 Bacteria 3059
9 Ga0070660_100275214 3300005339 Bacteria 1377
10 Ga0070660_100502358 3300005339 Bacteria 1009
11 Ga0070661_100139282 3300005344 Bacteria 1828
12 Ga0070671_100377916 3300005355 Bacteria 1211
13 Ga0070709_10143143 3300005434 Bacteria 1645
14 Ga0070709_10180197 3300005434 Bacteria 1483
15 Ga0070714_100055873 3300005435 Bacteria 3375
16 Ga0070714_100251003 3300005435 Bacteria 1636
17 Ga0070713_100246643 3300005436 Bacteria 1628
18 Ga0070681_10147078 3300005458 Bacteria 2285
19 Ga0070681_10157926 3300005458 Bacteria 2192
20 Ga0070706_100111259 3300005467 Bacteria 2548
21 Ga0070679_100155991 3300005530 Bacteria 2258
22 Ga0070679_100550264 3300005530 Bacteria 1098
23 Ga0070684_100022578 3300005535 Bacteria 5251
24 Ga0070684_100132857 3300005535 Bacteria 2246
25 Ga0068855_100059438 3300005563 Bacteria 4472
26 Ga0068855_100250906 3300005563 Bacteria 1974
27 Ga0081455_10012688 3300005937 Bacteria 8386
28 Ga0081539_10001667 3300005985 Bacteria 35954
29 Ga0075430_100030992 3300006846 Bacteria 4541
30 Ga0075431_100018820 3300006847 Bacteria 7035
31 Ga0075433_10426668 3300006852 Bacteria 1169
32 Ga0075434_100064870 3300006871 Bacteria 3637
33 Ga0075429_100097178 3300006880 Bacteria 2569
34 Ga0105240_10019072 3300009093 Bacteria 9173
35 Ga0114129_10211200 3300009147 Bacteria 2624
36 Ga0157371_10107925 3300013102 Bacteria 1975
37 Ga0157370_10052172 3300013104 Bacteria 3905
38 Ga0157370_10212345 3300013104 Bacteria 1794
39 Ga0157369_10031243 3300013105 Bacteria 5866
40 Ga0157369_10213245 3300013105 Bacteria 2023
41 Ga0182008_10001690 3300014497 Bacteria 14495
42 Ga0182007_10012633 3300015262 Bacteria 3242
43 Ga0206356_11152906 3300020070 Bacteria 1743
44 Ga0206354_10026797 3300020081 Bacteria 1343
45 Ga0206354_10879488 3300020081 Bacteria 3053
46 Ga0206353_10721389 3300020082 Bacteria 768
47 Ga0206353_11143776 3300020082 Bacteria 4952
48 Ga0206353_11586377 3300020082 Bacteria 2142
49 Ga0207705_10031490 3300025909 Bacteria 3787
50 Ga0207705_10491297 3300025909 Bacteria 953
51 Ga0207684_10229572 3300025910 Bacteria 1601
52 Ga0207707_10026578 3300025912 Bacteria 5059
53 Ga0207707_10074647 3300025912 Bacteria 2958
54 Ga0207695_10022700 3300025913 Bacteria 7113
55 Ga0207657_10048017 3300025919 Bacteria 3728
56 Ga0207657_10571784 3300025919 Bacteria 883
57 Ga0207649_10106890 3300025920 Bacteria 1862
58 Ga0207649_10622969 3300025920 Bacteria 831
59 Ga0207652_10142562 3300025921 Bacteria 2143
60 Ga0207652_10494411 3300025921 Bacteria 1101
61 Ga0207646_10261905 3300025922 Bacteria 1562
62 Ga0207646_10744565 3300025922 Bacteria 875
63 Ga0207687_10397688 3300025927 Bacteria 1132
64 Ga0207700_10476881 3300025928 Bacteria 1102
65 Ga0207664_10632391 3300025929 Bacteria 961
66 Ga0207661_10001847 3300025944 Bacteria 14490
67 Ga0207661_10102726 3300025944 Bacteria 2404
68 Ga0207667_10184284 3300025949 Bacteria 2143
69 Ga0207683_10336755 3300026121 Bacteria 1383
70 Ga0265319_1004238 3300028563 Bacteria 7160
71 Ga0265319_1087558 3300028563 Bacteria 984
72 Ga0265334_10023090 3300028573 Bacteria 2531
73 Ga0265334_10074920 3300028573 Bacteria 1255
74 Ga0265318_10002752 3300028577 Bacteria 9214
75 Ga0265318_10025738 3300028577 Bacteria 2320
76 Ga0265318_10040916 3300028577 Bacteria 1763
77 Ga0265322_10007120 3300028654 Bacteria 3277
78 Ga0265338_10018925 3300028800 Bacteria 7342
79 Ga0265338_10043453 3300028800 Bacteria 4167
80 Ga0265338_10060910 3300028800 Bacteria 3310
81 Ga0265338_10304350 3300028800 Bacteria 1158
82 Ga0265324_10029494 3300029957 Bacteria 1929
83 Ga0265330_10004477 3300031235 Bacteria 7088
84 Ga0265330_10034378 3300031235 Bacteria 2264
85 Ga0265332_10003248 3300031238 Bacteria 7899
86 Ga0265328_10005774 3300031239 Bacteria 5282
87 Ga0265320_10010113 3300031240 Bacteria 5638
88 Ga0265320_10038593 3300031240 Bacteria 2394
89 Ga0265325_10000907 3300031241 Bacteria 21382
90 Ga0265325_10084735 3300031241 Bacteria 1571
91 Ga0265325_10132662 3300031241 Bacteria 1191
92 Ga0265329_10012770 3300031242 Bacteria 3010
93 Ga0265329_10026622 3300031242 Bacteria 1904
94 Ga0265340_10006660 3300031247 Bacteria 6332
95 Ga0265339_10027982 3300031249 Bacteria 3209
96 Ga0265331_10021406 3300031250 Bacteria 3309
97 Ga0265331_10218116 3300031250 Bacteria 858
98 Ga0265327_10010643 3300031251 Bacteria 6438
99 Ga0265327_10012838 3300031251 Bacteria 5614
100 Ga0265327_10142648 3300031251 Bacteria 1118
101 Ga0265316_10014890 3300031344 Bacteria 6821
102 Ga0265316_10033778 3300031344 Bacteria 4161
103 Ga0265313_10011310 3300031595 Bacteria 5557
104 Ga0265313_10146348 3300031595 Bacteria 1013
105 Ga0265314_10040751 3300031711 Bacteria 3330
106 Ga0265314_10179864 3300031711 Bacteria 1268
107 Ga0265342_10017263 3300031712 Bacteria 4699
108 Ga0265342_10020310 3300031712 Bacteria 4264
109 Ga0307416_100104302 3300032002 Bacteria 2478
110 Ga0307415_100181159 3300032126 Bacteria 1653
111 Ga0373942_0066980 3300035207 Bacteria 1041
112 Ga0373937_0058880 3300036401 Bacteria 3529
113 Ga0395899_0009442 3300037312 Bacteria 7490
114 Ga0395899_0019676 3300037312 Bacteria 5125
115 Ga0395899_0128845 3300037312 Bacteria 1808
116 Ga0395899_0161708 3300037312 Bacteria 1581
117 Ga0395899_0228877 3300037312 Bacteria 1284
118 Ga0395899_0569813 3300037312 Bacteria 725
119 Ga0395900_0083842 3300037418 Bacteria 3274
120 Ga0395900_0251699 3300037418 Bacteria 1768
121 Ga0395898_0032801 3300037466 Bacteria 5185
122 Ga0395898_0141608 3300037466 Bacteria 2302
123 Ga0395898_0390720 3300037466 Bacteria 1326
124 Ga0395905_0138981 3300037471 Bacteria 2285
125 Ga0395905_0766813 3300037471 Bacteria 867
126 Ga0395901_0048049 3300038443 Bacteria 4431
127 Ga0395901_0697906 3300038443 Bacteria 1013
128 Ga0436363_0738366 3300039450 Bacteria 642
129 Ga0453683_0000250 3300044673 Bacteria 71009
130 Ga0466966_0005169 3300044684 Bacteria 8578
131 Ga0466966_0274268 3300044684 Bacteria 1015
132 Ga0466961_0217723 3300044693 Bacteria 1177
133 Ga0466963_0001774 3300044694 Bacteria 11750
134 Ga0466963_0017991 3300044694 Bacteria 4410
135 Ga0466963_0028556 3300044694 Bacteria 3583
136 Ga0466963_0043184 3300044694 Bacteria 2963
137 Ga0466963_0116276 3300044694 Bacteria 1838
138 Ga0466963_0197154 3300044694 Bacteria 1408
139 Ga0466964_0167931 3300044706 Bacteria 1031
140 Ga0453684_0000424 3300044712 Bacteria 172336
141 Ga0466957_0272113 3300044842 Bacteria 1131
142 Ga0466959_0000811 3300045049 Bacteria 18406
143 Ga0451576_0043249 3300045051 Bacteria 4754
144 Ga0466958_0004842 3300045836 Bacteria 7166
145 Ga0466967_0006972 3300045976 Bacteria 8086
146 Ga0466967_0014344 3300045976 Bacteria 6169
147 Ga0466967_0033422 3300045976 Bacteria 4354
148 Ga0466967_0120275 3300045976 Bacteria 2425
149 Ga0466967_0401035 3300045976 Bacteria 1334
150 Ga0466967_0430255 3300045976 Bacteria 1287
151 Ga0466967_1443884 3300045976 Bacteria 685
152 Ga0495592_0492299 3300046454 Bacteria 762
153 Ga0495651_0006102 3300046462 Bacteria 9200
154 Ga0495651_0069414 3300046462 Bacteria 2684
155 Ga0495653_0026842 3300046463 Bacteria 4614
156 Ga0495653_0058623 3300046463 Bacteria 2926
157 Ga0495653_0544339 3300046463 Bacteria 719
158 Ga0495582_0113369 3300046473 Bacteria 1524
159 Ga0495582_0361636 3300046473 Bacteria 836
160 Ga0495664_0128805 3300046477 Bacteria 1532
161 Ga0495608_0049994 3300046511 Bacteria 2774
162 Ga0495630_0067164 3300046517 Bacteria 2695
163 Ga0495630_0201764 3300046517 Bacteria 1518
164 Ga0495630_0391974 3300046517 Bacteria 1064
165 Ga0495587_0219886 3300046536 Bacteria 1071
166 Ga0495667_0037864 3300046559 Bacteria 3213
167 Ga0495634_0065158 3300046642 Bacteria 2415
168 Ga0495634_0105171 3300046642 Bacteria 1820
169 Ga0495635_0220147 3300046663 Bacteria 1284
170 Ga0495657_0093703 3300046675 Bacteria 1922
171 Ga0495657_0130116 3300046675 Bacteria 1577
172 Ga0495599_0217178 3300046678 Bacteria 1171
173 Ga0495647_0238471 3300046681 Bacteria 807
174 Ga0495613_0354713 3300046689 Bacteria 1007
175 Ga0495674_0000901 3300047319 Bacteria 28391
176 Ga0495674_0499003 3300047319 Bacteria 974
177 Ga0495680_0002334 3300047322 Bacteria 19461
178 Ga0495680_0034920 3300047322 Bacteria 4055
179 Ga0495684_0047205 3300047471 Bacteria 3294
180 Ga0495684_0095591 3300047471 Bacteria 2249
181 Ga0495602_0464527 3300048088 Bacteria 891
182 Ga0496101_0249522 3300048904 Bacteria 1383
183 Ga0496102_0022364 3300048905 Bacteria 5602
184 Ga0496105_0252464 3300048908 Bacteria 1428
185 Ga0496108_0407377 3300048911 Bacteria 1188
186 Ga0496110_0035440 3300048913 Bacteria 4329
187 Ga0496111_0101400 3300048914 Bacteria 2115
188 Ga0496111_0295643 3300048914 Bacteria 1201
189 Ga0496112_0514928 3300048915 Unclassified 1131
190 Ga0496112_0681523 3300048915 Bacteria 956
191 Ga0496113_0442627 3300048916 Bacteria 1044
192 Ga0496114_0155418 3300048917 Bacteria 1986
193 Ga0496114_1083349 3300048917 Bacteria 686
194 Ga0501031_0195411 3300049568 Bacteria 1321
195 Ga0501034_0021730 3300049571 Bacteria 6538
196 Ga0501036_0270434 3300049572 Bacteria 1423
197 Ga0501040_0117675 3300049576 Bacteria 1863
198 Ga0501040_0368477 3300049576 Bacteria 1030
199 Ga0501067_0006220 3300049583 Bacteria 6617
200 Ga0501067_0162070 3300049583 Bacteria 1245
201 Ga0501068_0067432 3300049584 Bacteria 2181
202 Ga0501070_0030515 3300049586 Bacteria 4517
203 Ga0501070_0056042 3300049586 Bacteria 3267
204 Ga0501072_0452029 3300049588 Bacteria 1017
205 Ga0501073_0055739 3300049589 Bacteria 2765
206 Ga0501073_0149698 3300049589 Bacteria 1617
207 Ga0501074_0120750 3300049590 Bacteria 1874
208 Ga0501076_0236112 3300049592 Bacteria 1495
209 Ga0501077_0692931 3300049593 Bacteria 655
210 Ga0501079_0078257 3300049741 Bacteria 2558
211 Ga0501079_0111867 3300049741 Bacteria 2122
212 Ga0501080_0075791 3300049742 Bacteria 3128
213 Ga0501080_0374433 3300049742 Bacteria 1283
214 Ga0501081_0300327 3300049743 Bacteria 1178
215 Ga0501083_0000500 3300049744 Bacteria 25077
216 Ga0501083_0150840 3300049744 Bacteria 1522
217 nmdc:mga05p37_152773_c1 3300050507 Bacteria 2823
218 nmdc:mga09592_246998_c1 3300050508 Bacteria 1547
219 nmdc:mga0qj67_22232_c1 3300050509 Bacteria 4871
220 nmdc:mga06r32_48266_c1 3300050510 Bacteria 4069
221 nmdc:mga0n895_396055_c1 3300050512 Bacteria 1397
222 nmdc:mga0a205_396075_c1 3300050515 Bacteria 1245
223 Ga0495601_0353105 3300053077 Bacteria 956
224 Ga0495601_0423137 3300053077 Bacteria 863
225 Ga0495595_0173665 3300053084 Bacteria 1067
226 Ga0495619_0142730 3300053085 Bacteria 1650
227 Ga0495619_0320531 3300053085 Bacteria 1073
228 Ga0501084_0906309 3300054114 Bacteria 741
229 Ga0590075_064002 3300059424 Bacteria 949
230 Ga0590077_033538 3300059426 Bacteria 1127
231 Ga0501082_0203252 3300060353 Bacteria 1724
232 Ga0466962_0236174 3300061719 Bacteria 897
233 Ga0530510_0165244 3300061734 Bacteria 1638
234 Ga0451577_0000151
235 Ga0070658_10005470
236 Ga0070658_10080277
237 Ga0070683_100009889
238 Ga0070683_100100512
239 Ga0070683_100160123
240 Ga0070660_100013885
241 Ga0070660_100055610
242 Ga0070660_100275214
243 Ga0070660_100502358
244 Ga0070661_100139282
245 Ga0070671_100377916
246 Ga0070709_10143143
247 Ga0070709_10180197
248 Ga0070714_100055873
249 Ga0070714_100251003
250 Ga0070713_100246643
251 Ga0070681_10147078
252 Ga0070681_10157926
253 Ga0070706_100111259
254 Ga0070679_100155991
255 Ga0070679_100550264
256 Ga0070684_100022578
257 Ga0070684_100132857
258 Ga0068855_100059438
259 Ga0068855_100250906
260 Ga0081455_10012688
261 Ga0081539_10001667
262 Ga0075430_100030992
263 Ga0075431_100018820
264 Ga0075433_10426668
265 Ga0075434_100064870
266 Ga0075429_100097178
267 Ga0105240_10019072
268 Ga0114129_10211200
269 Ga0157371_10107925
270 Ga0157370_10052172
271 Ga0157370_10212345
272 Ga0157369_10031243
273 Ga0157369_10213245
274 Ga0182008_10001690
275 Ga0182007_10012633
276 Ga0206356_11152906
277 Ga0206354_10026797
278 Ga0206354_10879488
279 Ga0206353_10721389
280 Ga0206353_11143776
281 Ga0206353_11586377
282 Ga0207705_10031490
283 Ga0207705_10491297
284 Ga0207684_10229572
285 Ga0207707_10026578
286 Ga0207707_10074647
287 Ga0207695_10022700
288 Ga0207657_10048017
289 Ga0207657_10571784
290 Ga0207649_10106890
291 Ga0207649_10622969
292 Ga0207652_10142562
293 Ga0207652_10494411
294 Ga0207646_10261905
295 Ga0207646_10744565
296 Ga0207687_10397688
297 Ga0207700_10476881
298 Ga0207664_10632391
299 Ga0207661_10001847
300 Ga0207661_10102726
301 Ga0207667_10184284
302 Ga0207683_10336755
303 Ga0265319_1004238
304 Ga0265319_1087558
305 Ga0265334_10023090
306 Ga0265334_10074920
307 Ga0265318_10002752
308 Ga0265318_10025738
309 Ga0265318_10040916
310 Ga0265322_10007120
311 Ga0265338_10018925
312 Ga0265338_10043453
313 Ga0265338_10060910
314 Ga0265338_10304350
315 Ga0265324_10029494
316 Ga0265330_10004477
317 Ga0265330_10034378
318 Ga0265332_10003248
319 Ga0265328_10005774
320 Ga0265320_10010113
321 Ga0265320_10038593
322 Ga0265325_10000907
323 Ga0265325_10084735
324 Ga0265325_10132662
325 Ga0265329_10012770
326 Ga0265329_10026622
327 Ga0265340_10006660
328 Ga0265339_10027982
329 Ga0265331_10021406
330 Ga0265331_10218116
331 Ga0265327_10010643
332 Ga0265327_10012838
333 Ga0265327_10142648
334 Ga0265316_10014890
335 Ga0265316_10033778
336 Ga0265313_10011310
337 Ga0265313_10146348
338 Ga0265314_10040751
339 Ga0265314_10179864
340 Ga0265342_10017263
341 Ga0265342_10020310
342 Ga0307416_100104302
343 Ga0307415_100181159
344 Ga0373942_0066980
345 Ga0373937_0058880
346 Ga0395899_0009442
347 Ga0395899_0019676
348 Ga0395899_0128845
349 Ga0395899_0161708
350 Ga0395899_0228877
351 Ga0395899_0569813
352 Ga0395900_0083842
353 Ga0395900_0251699
354 Ga0395898_0032801
355 Ga0395898_0141608
356 Ga0395898_0390720
357 Ga0395905_0138981
358 Ga0395905_0766813
359 Ga0395901_0048049
360 Ga0395901_0697906
361 Ga0436363_0738366
362 Ga0453683_0000250
363 Ga0466966_0005169
364 Ga0466966_0274268
365 Ga0466961_0217723
366 Ga0466963_0001774
367 Ga0466963_0017991
368 Ga0466963_0028556
369 Ga0466963_0043184
370 Ga0466963_0116276
371 Ga0466963_0197154
372 Ga0466964_0167931
373 Ga0453684_0000424
374 Ga0466957_0272113
375 Ga0466959_0000811
376 Ga0451576_0043249
377 Ga0466958_0004842
378 Ga0466967_0006972
379 Ga0466967_0014344
380 Ga0466967_0033422
381 Ga0466967_0120275
382 Ga0466967_0401035
383 Ga0466967_0430255
384 Ga0466967_1443884
385 Ga0495592_0492299
386 Ga0495651_0006102
387 Ga0495651_0069414
388 Ga0495653_0026842
389 Ga0495653_0058623
390 Ga0495653_0544339
391 Ga0495582_0113369
392 Ga0495582_0361636
393 Ga0495664_0128805
394 Ga0495608_0049994
395 Ga0495630_0067164
396 Ga0495630_0201764
397 Ga0495630_0391974
398 Ga0495587_0219886
399 Ga0495667_0037864
400 Ga0495634_0065158
401 Ga0495634_0105171
402 Ga0495635_0220147
403 Ga0495657_0093703
404 Ga0495657_0130116
405 Ga0495599_0217178
406 Ga0495647_0238471
407 Ga0495613_0354713
408 Ga0495674_0000901
409 Ga0495674_0499003
410 Ga0495680_0002334
411 Ga0495680_0034920
412 Ga0495684_0047205
413 Ga0495684_0095591
414 Ga0495602_0464527
415 Ga0496101_0249522
416 Ga0496102_0022364
417 Ga0496105_0252464
418 Ga0496108_0407377
419 Ga0496110_0035440
420 Ga0496111_0101400
421 Ga0496111_0295643
422 Ga0496112_0514928
423 Ga0496112_0681523
424 Ga0496113_0442627
425 Ga0496114_0155418
426 Ga0496114_1083349
427 Ga0501031_0195411
428 Ga0501034_0021730
429 Ga0501036_0270434
430 Ga0501040_0117675
431 Ga0501040_0368477
432 Ga0501067_0006220
433 Ga0501067_0162070
434 Ga0501068_0067432
435 Ga0501070_0030515
436 Ga0501070_0056042
437 Ga0501072_0452029
438 Ga0501073_0055739
439 Ga0501073_0149698
440 Ga0501074_0120750
441 Ga0501076_0236112
442 Ga0501077_0692931
443 Ga0501079_0078257
444 Ga0501079_0111867
445 Ga0501080_0075791
446 Ga0501080_0374433
447 Ga0501081_0300327
448 Ga0501083_0000500
449 Ga0501083_0150840
450 nmdc:mga05p37_152773_c1
451 nmdc:mga09592_246998_c1
452 nmdc:mga0qj67_22232_c1
453 nmdc:mga06r32_48266_c1
454 nmdc:mga0n895_396055_c1
455 nmdc:mga0a205_396075_c1
456 Ga0495601_0353105
457 Ga0495601_0423137
458 Ga0495595_0173665
459 Ga0495619_0142730
460 Ga0495619_0320531
461 Ga0501084_0906309
462 Ga0590075_064002
463 Ga0590077_033538
464 Ga0501082_0203252
465 Ga0466962_0236174
466 Ga0530510_0165244

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02224

Cytidylate_kin

Cytidylate kinase

3

220

0.99

PF13207

AAA_17

AAA domain

7

77

0.83

PF13189

Cytidylate_kin2

Cytidylate kinase-like family

2

181

0.74

PF13238

AAA_18

AAA domain

3

167

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
2feo-assembly1.cif.gz_A mutant r188m of the cytidine monophosphate kinase from e. coli complexed with dcmp 0.9215 2 205
3r20-assembly1.cif.gz_A crystal structure of cytidylate kinase from mycobacterium smegmatis 0.9186 1 203
3akd-assembly1.cif.gz_A crystal structure of cmp kinase in complex with cdp from thermus thermophilus hb8 0.9144 2 206
1kdt-assembly1.cif.gz_A cytidine monophosphate kinase from e.coli in complex with 2',3'-dideoxy-cytidine monophosphate 0.9119 2 205
2feo-assembly1.cif.gz_A mutant r188m of the cytidine monophosphate kinase from e. coli complexed with dcmp 0.9088 2 205
ID Description Score Start End Superfamily
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8926 1 205 3.40.50.300
af_A0A0P0X3E8_17_159_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.887 2 30 3.40.50.300
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8845 1 205 3.40.50.300
4dieB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8822 1 205 3.40.50.300
af_Q2FYF5_1_183_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8777 34 206 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A538GT55-F1-model_v4 (d)CMP kinase (EC 2.7.4.25) 0.9734 1 183 GO:0005524
GO:0036430
GO:0036431
AF-A0A7M2YUM5-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9704 1 205 GO:0004127
GO:0005524
GO:0005737
GO:0006220
AF-A0A538GT55-F1-model_v4 (d)CMP kinase (EC 2.7.4.25) 0.9682 1 183 GO:0005524
GO:0036430
GO:0036431
AF-A0A7V9KZU5-F1-model_v4 (d)CMP kinase (EC 2.7.4.25) 0.9666 1 159 GO:0004127
GO:0005524
AF-A0A1F7RZQ0-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9643 1 205 GO:0005524
GO:0005829
GO:0006220
GO:0015949
GO:0036430
GO:0036431

Map