F346169

General Info

Members Datasets Scaffolds Average Seq Length
233 182 233 280

Family's Representative Sequence

Representative Sequence 3300025931|Ga0207644_10496131|Ga0207644_104961311
Length 310
Sequence VKFAFIKQHLAGEFPVDACCDVLEVSRSGYYAWLARPVSARAERRAELAAKIAQVHEENRGVYGSPRVCRVLEARGERVCENTVAGIMKERQIRAKTRRKFVPKTTDSRHQQPVADNVLARQFDAARPDEKWAVDITYIPTGEGWLYLAGVIDLCSRRVVGWSMAEHMGTGLVADALGMAIARRDPGAGLLHHSDRGSQYASDDYQHLLASHGITCSMSGRGDCWDNAVMESFWATLKNELVHHERYATREQARRSIFEYIEVFYNRQRLHSSLGYVSPEAFEAKPEIVHSLRESLQLRFGNGKSPGADL

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
98 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
99 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
100 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
106 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
107 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
119 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
125 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
126 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300049516 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_B_5_drought Metagenome Rhizosphere
138 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
139 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
153 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
154 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
155 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
156 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
157 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
158 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
159 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
160 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
161 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
162 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
163 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
164 3300049685 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_B_3_control Metagenome Rhizosphere
165 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
169 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
170 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
171 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
172 3300049774 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought Metagenome Rhizosphere
173 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
174 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
175 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
177 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
178 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
179 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 3.43
Rhizosphere 94.42
Stem 0
Stem Tuber 0
Unclassified 1.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10067998 3300003316 Unclassified 1389
2 Ga0070676_10161129 3300005328 Bacteria 1444
3 Ga0070683_100301100 3300005329 Bacteria 1525
4 Ga0070683_100346890 3300005329 Bacteria 1414
5 Ga0070690_100330439 3300005330 Bacteria 1101
6 Ga0070670_100179151 3300005331 Bacteria 1840
7 Ga0070670_100383069 3300005331 Bacteria 1239
8 Ga0070670_100488031 3300005331 Unclassified 1094
9 Ga0068869_100169091 3300005334 Bacteria 1707
10 Ga0068868_100111304 3300005338 Bacteria 2225
11 Ga0070669_100279238 3300005353 Bacteria 1338
12 Ga0070675_100187127 3300005354 Bacteria 1792
13 Ga0070675_100396884 3300005354 Bacteria 1230
14 Ga0070671_100194734 3300005355 Bacteria 1718
15 Ga0070671_100280331 3300005355 Bacteria 1417
16 Ga0070673_100358600 3300005364 Bacteria 1296
17 Ga0070688_100198699 3300005365 Bacteria 1402
18 Ga0070659_100229339 3300005366 Bacteria 1534
19 Ga0070713_100431870 3300005436 Bacteria 1234
20 Ga0070710_10205180 3300005437 Bacteria 1246
21 Ga0070711_100167292 3300005439 Bacteria 1672
22 Ga0070663_100258455 3300005455 Bacteria 1381
23 Ga0070663_100406609 3300005455 Bacteria 1114
24 Ga0070662_100204057 3300005457 Bacteria 1570
25 Ga0070681_10304110 3300005458 Bacteria 1504
26 Ga0070685_10178848 3300005466 Bacteria 1364
27 Ga0070679_100399041 3300005530 Bacteria 1321
28 Ga0070684_100265003 3300005535 Bacteria 1572
29 Ga0070697_100331402 3300005536 Bacteria 1312
30 Ga0068853_100391024 3300005539 Bacteria 1300
31 Ga0070672_100156850 3300005543 Bacteria 1886
32 Ga0070672_100228993 3300005543 Bacteria 1561
33 Ga0070693_100144870 3300005547 Bacteria 1499
34 Ga0070665_100216609 3300005548 Bacteria 1915
35 Ga0068855_100367284 3300005563 Bacteria 1582
36 Ga0070664_100099870 3300005564 Bacteria 2522
37 Ga0070664_100244509 3300005564 Bacteria 1611
38 Ga0070664_100310054 3300005564 Bacteria 1428
39 Ga0068854_100233216 3300005578 Bacteria 1462
40 Ga0068854_100322047 3300005578 Bacteria 1257
41 Ga0068856_100200960 3300005614 Bacteria 2007
42 Ga0068864_100331603 3300005618 Bacteria 1432
43 Ga0068851_10101868 3300005834 Bacteria 1525
44 Ga0068858_100198540 3300005842 Bacteria 1896
45 Ga0068858_100321566 3300005842 Bacteria 1479
46 Ga0068860_100280300 3300005843 Bacteria 1629
47 Ga0070717_10180104 3300006028 Bacteria 1842
48 Ga0075428_100411490 3300006844 Bacteria 1449
49 Ga0075430_100004630 3300006846 Bacteria 11573
50 Ga0075431_100244951 3300006847 Bacteria 1822
51 Ga0075429_100314921 3300006880 Bacteria 1370
52 Ga0105240_10502775 3300009093 Bacteria 1347
53 Ga0105245_10167398 3300009098 Bacteria 2090
54 Ga0105247_10123823 3300009101 Bacteria 1678
55 Ga0114129_10533752 3300009147 Bacteria 1528
56 Ga0105248_10184394 3300009177 Bacteria 2352
57 Ga0105248_10548138 3300009177 Bacteria 1304
58 Ga0105237_10437608 3300009545 Bacteria 1313
59 Ga0105238_10255927 3300009551 Bacteria 1730
60 Ga0157373_10110708 3300013100 Bacteria 1931
61 Ga0157371_10081772 3300013102 Bacteria 2287
62 Ga0157374_10257514 3300013296 Bacteria 1718
63 Ga0157378_10537130 3300013297 Bacteria 1173
64 Ga0157372_10113910 3300013307 Bacteria 3100
65 Ga0157372_10166556 3300013307 Bacteria 2549
66 Ga0157372_10257294 3300013307 Bacteria 2027
67 Ga0157372_10385935 3300013307 Bacteria 1632
68 Ga0157372_10491314 3300013307 Bacteria 1431
69 Ga0182008_10103046 3300014497 Bacteria 1411
70 Ga0157377_10182580 3300014745 Bacteria 1320
71 Ga0157379_10198455 3300014968 Bacteria 1814
72 Ga0157379_10325730 3300014968 Bacteria 1403
73 Ga0157376_10538833 3300014969 Bacteria 1153
74 Ga0213876_10042245 3300021384 Bacteria 2409
75 Ga0207697_10048316 3300025315 Bacteria 1755
76 Ga0207656_10032925 3300025321 Bacteria 2156
77 Ga0207680_10131398 3300025903 Bacteria 1651
78 Ga0207699_10092073 3300025906 Bacteria 1905
79 Ga0207699_10170953 3300025906 Bacteria 1454
80 Ga0207645_10197025 3300025907 Bacteria 1324
81 Ga0207707_10274831 3300025912 Bacteria 1460
82 Ga0207695_10354243 3300025913 Bacteria 1354
83 Ga0207693_10200271 3300025915 Bacteria 1570
84 Ga0207649_10263812 3300025920 Bacteria 1246
85 Ga0207652_10357621 3300025921 Bacteria 1318
86 Ga0207681_10265695 3300025923 Bacteria 1345
87 Ga0207650_10213639 3300025925 Bacteria 1550
88 Ga0207650_10242520 3300025925 Bacteria 1457
89 Ga0207659_10359833 3300025926 Bacteria 1209
90 Ga0207659_10364500 3300025926 Bacteria 1202
91 Ga0207659_10381707 3300025926 Bacteria 1175
92 Ga0207687_10188743 3300025927 Bacteria 1602
93 Ga0207700_10076794 3300025928 Bacteria 2593
94 Ga0207644_10176104 3300025931 Bacteria 1673
95 Ga0207644_10317729 3300025931 Bacteria 1258
96 Ga0207644_10496131 3300025931 Bacteria 1007
97 Ga0207690_10294459 3300025932 Bacteria 1268
98 Ga0207706_10200469 3300025933 Bacteria 1750
99 Ga0207706_10439304 3300025933 Bacteria 1130
100 Ga0207686_10401364 3300025934 Bacteria 1044
101 Ga0207670_10237983 3300025936 Bacteria 1401
102 Ga0207691_10102981 3300025940 Bacteria 2546
103 Ga0207691_10234803 3300025940 Bacteria 1587
104 Ga0207711_10469742 3300025941 Bacteria 1171
105 Ga0207689_10216238 3300025942 Bacteria 1583
106 Ga0207661_10233249 3300025944 Bacteria 1630
107 Ga0207661_10271861 3300025944 Bacteria 1512
108 Ga0207679_10158299 3300025945 Bacteria 1851
109 Ga0207679_10187027 3300025945 Bacteria 1718
110 Ga0207651_10340582 3300025960 Bacteria 1259
111 Ga0207677_10328667 3300026023 Bacteria 1273
112 Ga0207703_10039198 3300026035 Bacteria 3785
113 Ga0207703_10235374 3300026035 Bacteria 1644
114 Ga0207639_10130380 3300026041 Bacteria 2080
115 Ga0207639_10499593 3300026041 Bacteria 1111
116 Ga0207678_10038522 3300026067 Bacteria 4154
117 Ga0207678_10216564 3300026067 Bacteria 1639
118 Ga0207641_10284983 3300026088 Bacteria 1555
119 Ga0207676_10494742 3300026095 Bacteria 1160
120 Ga0207698_10559285 3300026142 Bacteria 1123
121 Ga0268266_10410712 3300028379 Bacteria 1281
122 Ga0268264_10152946 3300028381 Bacteria 2070
123 Ga0265319_1045160 3300028563 Bacteria 1474
124 Ga0265318_10119944 3300028577 Bacteria 967
125 Ga0265322_10037669 3300028654 Unclassified 1377
126 Ga0265338_10144667 3300028800 Bacteria 1856
127 Ga0265330_10118334 3300031235 Unclassified 1129
128 Ga0265332_10080012 3300031238 Bacteria 1386
129 Ga0265332_10103080 3300031238 Bacteria 1203
130 Ga0265328_10065340 3300031239 Bacteria 1336
131 Ga0265320_10067068 3300031240 Bacteria 1699
132 Ga0265320_10091964 3300031240 Bacteria 1404
133 Ga0265339_10130049 3300031249 Bacteria 1288
134 Ga0265331_10078274 3300031250 Bacteria 1539
135 Ga0265331_10125952 3300031250 Bacteria 1170
136 Ga0265316_10103194 3300031344 Bacteria 2165
137 Ga0265316_10167506 3300031344 Bacteria 1640
138 Ga0265316_10172571 3300031344 Unclassified 1612
139 Ga0265316_10252310 3300031344 Bacteria 1295
140 Ga0307408_100348343 3300031548 Bacteria 1256
141 Ga0265313_10072069 3300031595 Bacteria 1588
142 Ga0265313_10094426 3300031595 Bacteria 1336
143 Ga0265314_10096695 3300031711 Unclassified 1909
144 Ga0265342_10120760 3300031712 Bacteria 1476
145 Ga0265342_10156414 3300031712 Bacteria 1262
146 Ga0307405_10204407 3300031731 Bacteria 1437
147 Ga0307405_10231153 3300031731 Bacteria 1363
148 Ga0307413_10143271 3300031824 Bacteria 1654
149 Ga0307410_10101868 3300031852 Bacteria 2059
150 Ga0307410_10276594 3300031852 Bacteria 1315
151 Ga0307410_10347433 3300031852 Bacteria 1184
152 Ga0307406_10218668 3300031901 Bacteria 1414
153 Ga0307407_10080598 3300031903 Bacteria 1967
154 Ga0307412_10501652 3300031911 Bacteria 1010
155 Ga0307409_100419645 3300031995 Bacteria 1283
156 Ga0307409_100545161 3300031995 Bacteria 1137
157 Ga0307416_100405368 3300032002 Bacteria 1402
158 Ga0307414_10388749 3300032004 Bacteria 1208
159 Ga0307411_10262953 3300032005 Bacteria 1363
160 Ga0307411_10495938 3300032005 Bacteria 1031
161 Ga0307415_100116934 3300032126 Bacteria 1990
162 Ga0436364_0772060 3300037853 Bacteria 1206
163 Ga0395901_0236193 3300038443 Bacteria 1908
164 Ga0395901_0328016 3300038443 Bacteria 1583
165 Ga0395901_0390909 3300038443 Bacteria 1430
166 Ga0436365_1434356 3300039437 Unclassified 1734
167 Ga0436362_0750485 3300039453 Unclassified 2046
168 Ga0451577_0089206 3300042876 Bacteria 2752
169 Ga0453684_0281557 3300044712 Bacteria 1896
170 Ga0453684_0409513 3300044712 Bacteria 1517
171 Ga0495587_0156411 3300046536 Bacteria 1298
172 Ga0495667_0210301 3300046559 Bacteria 1243
173 Ga0495675_0150880 3300047444 Bacteria 1436
174 Ga0495684_0235950 3300047471 Bacteria 1336
175 Ga0496100_0215062 3300048903 Bacteria 1408
176 Ga0496101_0369540 3300048904 Bacteria 1128
177 Ga0496102_0239204 3300048905 Bacteria 1712
178 Ga0496107_0184091 3300048910 Bacteria 1551
179 Ga0496108_0363548 3300048911 Bacteria 1263
180 Ga0496109_0308258 3300048912 Bacteria 1493
181 Ga0496110_0258094 3300048913 Bacteria 1586
182 Ga0496113_0382614 3300048916 Bacteria 1129
183 Ga0501293_002881 3300049516 Bacteria 1315
184 Ga0501296_004155 3300049519 Bacteria 1568
185 Ga0501298_001993 3300049521 Bacteria 3053
186 Ga0501298_033610 3300049521 Bacteria 1017
187 Ga0501031_0232846 3300049568 Bacteria 1198
188 Ga0501032_0164535 3300049569 Bacteria 1456
189 Ga0501036_0246100 3300049572 Bacteria 1499
190 Ga0501036_0287227 3300049572 Bacteria 1376
191 Ga0501043_0000451 3300049579 Bacteria 36534
192 Ga0501046_0257250 3300049580 Bacteria 1283
193 Ga0501047_0026991 3300049581 Bacteria 5530
194 Ga0501048_0001608 3300049582 Bacteria 17187
195 Ga0501071_0228503 3300049587 Bacteria 1401
196 Ga0501072_0384783 3300049588 Bacteria 1113
197 Ga0501073_0310205 3300049589 Bacteria 1088
198 Ga0501074_0165640 3300049590 Bacteria 1578
199 Ga0501076_0267601 3300049592 Bacteria 1399
200 Ga0501198_011819 3300049649 Bacteria 1306
201 Ga0501199_004003 3300049650 Bacteria 1437
202 Ga0501202_013874 3300049652 Bacteria 1537
203 Ga0501206_006250 3300049653 Bacteria 1545
204 Ga0501208_008634 3300049655 Bacteria 1381
205 Ga0501209_043017 3300049656 Bacteria 1202
206 Ga0501217_050719 3300049661 Bacteria 1084
207 Ga0501230_010984 3300049667 Bacteria 1426
208 Ga0501233_024085 3300049668 Bacteria 1328
209 Ga0501240_011904 3300049673 Bacteria 1180
210 Ga0501242_019421 3300049674 Unclassified 868
211 Ga0501243_009977 3300049675 Bacteria 1478
212 Ga0501256_003166 3300049685 Bacteria 1350
213 Ga0501260_000522 3300049689 Bacteria 2960
214 Ga0501080_0218795 3300049742 Bacteria 1743
215 Ga0501081_0294739 3300049743 Bacteria 1189
216 Ga0501083_0014396 3300049744 Bacteria 5530
217 Ga0501083_0284191 3300049744 Bacteria 1076
218 Ga0501266_013426 3300049763 Bacteria 1065
219 Ga0501269_017578 3300049766 Unclassified 885
220 Ga0501272_005678 3300049769 Bacteria 1319
221 Ga0501278_001743 3300049774 Bacteria 1539
222 Ga0501280_009409 3300049776 Bacteria 1359
223 Ga0501283_004715 3300049779 Unclassified 1851
224 Ga0501044_0221264 3300049823 Bacteria 1843
225 Ga0501045_0070131 3300049824 Bacteria 2578
226 nmdc:mga05p37_564687_c1 3300050507 Bacteria 1292
227 nmdc:mga09592_446234_c1 3300050508 Bacteria 1116
228 nmdc:mga09592_58823_c1 3300050508 Bacteria 3250
229 Ga0500622_0007992 3300053156 Bacteria 5955
230 Ga0501084_0495665 3300054114 Bacteria 1032
231 Ga0501082_0127867 3300060353 Bacteria 2204
232 Ga0501082_0315563 3300060353 Bacteria 1361
233 Ga0530510_0288637 3300061734 Bacteria 1226

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026035 Ga0207703_10039198 Ga0207703_100391982 214
2 3300049744 Ga0501083_0284191 Ga0501083_0284191_229_939 225
3 3300049656 Ga0501209_043017 Ga0501209_043017_58_831 229
4 3300038443 Ga0395901_0236193 Ga0395901_0236193_836_1708 236
5 3300013297 Ga0157378_10537130 Ga0157378_105371302 242
6 3300031250 Ga0265331_10078274 Ga0265331_100782741 243
7 3300005328 Ga0070676_10161129 Ga0070676_101611291 249
8 3300005334 Ga0068869_100169091 Ga0068869_1001690912 249
9 3300005338 Ga0068868_100111304 Ga0068868_1001113043 249
10 3300005354 Ga0070675_100187127 Ga0070675_1001871272 249
11 3300005355 Ga0070671_100194734 Ga0070671_1001947342 249
12 3300005365 Ga0070688_100198699 Ga0070688_1001986991 249
13 3300005455 Ga0070663_100258455 Ga0070663_1002584552 249
14 3300005466 Ga0070685_10178848 Ga0070685_101788481 249
15 3300005543 Ga0070672_100156850 Ga0070672_1001568502 249
16 3300005548 Ga0070665_100216609 Ga0070665_1002166092 249
17 3300005564 Ga0070664_100310054 Ga0070664_1003100541 249
18 3300005578 Ga0068854_100233216 Ga0068854_1002332162 249
19 3300005618 Ga0068864_100331603 Ga0068864_1003316032 249
20 3300005834 Ga0068851_10101868 Ga0068851_101018681 249
21 3300005842 Ga0068858_100321566 Ga0068858_1003215661 249
22 3300009098 Ga0105245_10167398 Ga0105245_101673982 249
23 3300009101 Ga0105247_10123823 Ga0105247_101238232 249
24 3300009177 Ga0105248_10548138 Ga0105248_105481381 249
25 3300013296 Ga0157374_10257514 Ga0157374_102575142 249
26 3300014745 Ga0157377_10182580 Ga0157377_101825802 249
27 3300014968 Ga0157379_10325730 Ga0157379_103257302 249
28 3300025315 Ga0207697_10048316 Ga0207697_100483162 249
29 3300025321 Ga0207656_10032925 Ga0207656_100329252 249
30 3300025907 Ga0207645_10197025 Ga0207645_101970251 249
31 3300025926 Ga0207659_10359833 Ga0207659_103598331 249
32 3300025927 Ga0207687_10188743 Ga0207687_101887432 249
33 3300025931 Ga0207644_10317729 Ga0207644_103177292 249
34 3300025941 Ga0207711_10469742 Ga0207711_104697421 249
35 3300025942 Ga0207689_10216238 Ga0207689_102162381 249
36 3300025945 Ga0207679_10187027 Ga0207679_101870272 249
37 3300026023 Ga0207677_10328667 Ga0207677_103286671 249
38 3300026035 Ga0207703_10235374 Ga0207703_102353743 249
39 3300026067 Ga0207678_10038522 Ga0207678_100385223 249
40 3300026088 Ga0207641_10284983 Ga0207641_102849832 249
41 3300028379 Ga0268266_10410712 Ga0268266_104107122 249
42 3300048904 Ga0496101_0369540 Ga0496101_0369540_202_1059 249
43 3300048905 Ga0496102_0239204 Ga0496102_0239204_441_1298 249
44 3300048910 Ga0496107_0184091 Ga0496107_0184091_156_1013 249
45 3300048911 Ga0496108_0363548 Ga0496108_0363548_125_982 249
46 3300048912 Ga0496109_0308258 Ga0496109_0308258_79_936 249
47 3300048913 Ga0496110_0258094 Ga0496110_0258094_255_1112 249
48 3300048916 Ga0496113_0382614 Ga0496113_0382614_76_933 249
49 3300025920 Ga0207649_10263812 Ga0207649_102638122 253
50 3300049674 Ga0501242_019421 Ga0501242_019421_17_817 254
51 3300025940 Ga0207691_10234803 Ga0207691_102348031 257
52 3300005842 Ga0068858_100198540 Ga0068858_1001985402 260
53 3300009177 Ga0105248_10184394 Ga0105248_101843943 260
54 3300031852 Ga0307410_10276594 Ga0307410_102765942 260
55 3300031901 Ga0307406_10218668 Ga0307406_102186682 260
56 3300042876 Ga0451577_0089206 Ga0451577_0089206_1756_2589 260
57 3300049516 Ga0501293_002881 Ga0501293_002881_332_1201 260
58 3300049519 Ga0501296_004155 Ga0501296_004155_362_1231 260
59 3300049521 Ga0501298_001993 Ga0501298_001993_2015_2884 260
60 3300049649 Ga0501198_011819 Ga0501198_011819_55_924 260
61 3300049650 Ga0501199_004003 Ga0501199_004003_192_1061 260
62 3300049652 Ga0501202_013874 Ga0501202_013874_297_1166 260
63 3300049653 Ga0501206_006250 Ga0501206_006250_312_1181 260
64 3300049655 Ga0501208_008634 Ga0501208_008634_370_1239 260
65 3300049667 Ga0501230_010984 Ga0501230_010984_114_983 260
66 3300049668 Ga0501233_024085 Ga0501233_024085_40_909 260
67 3300049673 Ga0501240_011904 Ga0501240_011904_164_1033 260
68 3300049675 Ga0501243_009977 Ga0501243_009977_363_1256 260
69 3300049685 Ga0501256_003166 Ga0501256_003166_432_1301 260
70 3300049689 Ga0501260_000522 Ga0501260_000522_381_1241 260
71 3300049763 Ga0501266_013426 Ga0501266_013426_41_910 260
72 3300049766 Ga0501269_017578 Ga0501269_017578_27_851 260
73 3300049769 Ga0501272_005678 Ga0501272_005678_71_940 260
74 3300049774 Ga0501278_001743 Ga0501278_001743_367_1236 260
75 3300049776 Ga0501280_009409 Ga0501280_009409_126_995 260
76 3300049779 Ga0501283_004715 Ga0501283_004715_370_1239 260
77 3300025933 Ga0207706_10439304 Ga0207706_104393041 261
78 3300053156 Ga0500622_0007992 Ga0500622_0007992_3889_4695 262
79 3300014968 Ga0157379_10198455 Ga0157379_101984552 263
80 3300005547 Ga0070693_100144870 Ga0070693_1001448703 264
81 3300025923 Ga0207681_10265695 Ga0207681_102656951 264
82 3300026142 Ga0207698_10559285 Ga0207698_105592851 264
83 3300005458 Ga0070681_10304110 Ga0070681_103041101 266
84 3300009093 Ga0105240_10502775 Ga0105240_105027752 266
85 3300009545 Ga0105237_10437608 Ga0105237_104376081 266
86 3300013307 Ga0157372_10113910 Ga0157372_101139103 266
87 3300025912 Ga0207707_10274831 Ga0207707_102748312 266
88 3300025913 Ga0207695_10354243 Ga0207695_103542432 266
89 3300046536 Ga0495587_0156411 Ga0495587_0156411_65_919 267
90 3300046559 Ga0495667_0210301 Ga0495667_0210301_235_1089 267
91 3300047444 Ga0495675_0150880 Ga0495675_0150880_97_951 267
92 3300047471 Ga0495684_0235950 Ga0495684_0235950_147_1001 267
93 3300005331 Ga0070670_100488031 Ga0070670_1004880311 268
94 3300009551 Ga0105238_10255927 Ga0105238_102559271 268
95 3300021384 Ga0213876_10042245 Ga0213876_100422452 268
96 3300025936 Ga0207670_10237983 Ga0207670_102379832 268
97 3300028577 Ga0265318_10119944 Ga0265318_101199442 268
98 3300031548 Ga0307408_100348343 Ga0307408_1003483432 268
99 3300031731 Ga0307405_10204407 Ga0307405_102044072 268
100 3300031852 Ga0307410_10347433 Ga0307410_103474331 268
101 3300031995 Ga0307409_100419645 Ga0307409_1004196452 268
102 3300032005 Ga0307411_10495938 Ga0307411_104959381 268
103 3300037853 Ga0436364_0772060 Ga0436364_0772060_110_967 268
104 3300039437 Ga0436365_1434356 Ga0436365_1434356_32_901 268
105 3300039453 Ga0436362_0750485 Ga0436362_0750485_1149_2018 268
106 3300049521 Ga0501298_033610 Ga0501298_033610_99_959 268
107 3300049661 Ga0501217_050719 Ga0501217_050719_23_835 268
108 3300005329 Ga0070683_100301100 Ga0070683_1003011003 269
109 3300005329 Ga0070683_100346890 Ga0070683_1003468902 269
110 3300005330 Ga0070690_100330439 Ga0070690_1003304391 269
111 3300005331 Ga0070670_100179151 Ga0070670_1001791512 269
112 3300005331 Ga0070670_100383069 Ga0070670_1003830692 269
113 3300005353 Ga0070669_100279238 Ga0070669_1002792382 269
114 3300005354 Ga0070675_100396884 Ga0070675_1003968841 269
115 3300005355 Ga0070671_100280331 Ga0070671_1002803311 269
116 3300005364 Ga0070673_100358600 Ga0070673_1003586002 269
117 3300005366 Ga0070659_100229339 Ga0070659_1002293392 269
118 3300005436 Ga0070713_100431870 Ga0070713_1004318701 269
119 3300005437 Ga0070710_10205180 Ga0070710_102051801 269
120 3300005439 Ga0070711_100167292 Ga0070711_1001672922 269
121 3300005455 Ga0070663_100406609 Ga0070663_1004066092 269
122 3300005457 Ga0070662_100204057 Ga0070662_1002040573 269
123 3300005530 Ga0070679_100399041 Ga0070679_1003990412 269
124 3300005535 Ga0070684_100265003 Ga0070684_1002650033 269
125 3300005536 Ga0070697_100331402 Ga0070697_1003314022 269
126 3300005539 Ga0068853_100391024 Ga0068853_1003910241 269
127 3300005543 Ga0070672_100228993 Ga0070672_1002289932 269
128 3300005563 Ga0068855_100367284 Ga0068855_1003672843 269
129 3300005564 Ga0070664_100099870 Ga0070664_1000998702 269
130 3300005564 Ga0070664_100244509 Ga0070664_1002445093 269
131 3300005578 Ga0068854_100322047 Ga0068854_1003220472 269
132 3300005614 Ga0068856_100200960 Ga0068856_1002009603 269
133 3300005843 Ga0068860_100280300 Ga0068860_1002803002 269
134 3300006028 Ga0070717_10180104 Ga0070717_101801042 269
135 3300006844 Ga0075428_100411490 Ga0075428_1004114901 269
136 3300006846 Ga0075430_100004630 Ga0075430_1000046302 269
137 3300006847 Ga0075431_100244951 Ga0075431_1002449512 269
138 3300006880 Ga0075429_100314921 Ga0075429_1003149211 269
139 3300009147 Ga0114129_10533752 Ga0114129_105337522 269
140 3300013100 Ga0157373_10110708 Ga0157373_101107083 269
141 3300013102 Ga0157371_10081772 Ga0157371_100817722 269
142 3300013307 Ga0157372_10166556 Ga0157372_101665563 269
143 3300013307 Ga0157372_10257294 Ga0157372_102572942 269
144 3300013307 Ga0157372_10385935 Ga0157372_103859352 269
145 3300013307 Ga0157372_10491314 Ga0157372_104913142 269
146 3300014497 Ga0182008_10103046 Ga0182008_101030462 269
147 3300014969 Ga0157376_10538833 Ga0157376_105388331 269
148 3300025903 Ga0207680_10131398 Ga0207680_101313982 269
149 3300025906 Ga0207699_10092073 Ga0207699_100920733 269
150 3300025906 Ga0207699_10170953 Ga0207699_101709532 269
151 3300025915 Ga0207693_10200271 Ga0207693_102002712 269
152 3300025921 Ga0207652_10357621 Ga0207652_103576212 269
153 3300025925 Ga0207650_10213639 Ga0207650_102136392 269
154 3300025925 Ga0207650_10242520 Ga0207650_102425202 269
155 3300025926 Ga0207659_10364500 Ga0207659_103645002 269
156 3300025926 Ga0207659_10381707 Ga0207659_103817071 269
157 3300025928 Ga0207700_10076794 Ga0207700_100767944 269
158 3300025931 Ga0207644_10176104 Ga0207644_101761042 269
159 3300025931 Ga0207644_10496131 Ga0207644_104961311 269
160 3300025932 Ga0207690_10294459 Ga0207690_102944592 269
161 3300025933 Ga0207706_10200469 Ga0207706_102004692 269
162 3300025934 Ga0207686_10401364 Ga0207686_104013641 269
163 3300025940 Ga0207691_10102981 Ga0207691_101029812 269
164 3300025944 Ga0207661_10233249 Ga0207661_102332491 269
165 3300025944 Ga0207661_10271861 Ga0207661_102718611 269
166 3300025945 Ga0207679_10158299 Ga0207679_101582992 269
167 3300025960 Ga0207651_10340582 Ga0207651_103405822 269
168 3300026041 Ga0207639_10130380 Ga0207639_101303802 269
169 3300026041 Ga0207639_10499593 Ga0207639_104995931 269
170 3300026067 Ga0207678_10216564 Ga0207678_102165643 269
171 3300026095 Ga0207676_10494742 Ga0207676_104947421 269
172 3300028381 Ga0268264_10152946 Ga0268264_101529461 269
173 3300028563 Ga0265319_1045160 Ga0265319_10451602 269
174 3300028800 Ga0265338_10144667 Ga0265338_101446673 269
175 3300031238 Ga0265332_10080012 Ga0265332_100800121 269
176 3300031238 Ga0265332_10103080 Ga0265332_101030802 269
177 3300031239 Ga0265328_10065340 Ga0265328_100653401 269
178 3300031240 Ga0265320_10067068 Ga0265320_100670681 269
179 3300031240 Ga0265320_10091964 Ga0265320_100919642 269
180 3300031249 Ga0265339_10130049 Ga0265339_101300491 269
181 3300031250 Ga0265331_10125952 Ga0265331_101259522 269
182 3300031344 Ga0265316_10103194 Ga0265316_101031942 269
183 3300031344 Ga0265316_10167506 Ga0265316_101675062 269
184 3300031344 Ga0265316_10252310 Ga0265316_102523101 269
185 3300031595 Ga0265313_10072069 Ga0265313_100720693 269
186 3300031595 Ga0265313_10094426 Ga0265313_100944262 269
187 3300031712 Ga0265342_10120760 Ga0265342_101207602 269
188 3300031712 Ga0265342_10156414 Ga0265342_101564142 269
189 3300031731 Ga0307405_10231153 Ga0307405_102311532 269
190 3300031824 Ga0307413_10143271 Ga0307413_101432714 269
191 3300031852 Ga0307410_10101868 Ga0307410_101018682 269
192 3300031903 Ga0307407_10080598 Ga0307407_100805982 269
193 3300031911 Ga0307412_10501652 Ga0307412_105016521 269
194 3300031995 Ga0307409_100545161 Ga0307409_1005451612 269
195 3300032002 Ga0307416_100405368 Ga0307416_1004053682 269
196 3300032004 Ga0307414_10388749 Ga0307414_103887492 269
197 3300032005 Ga0307411_10262953 Ga0307411_102629532 269
198 3300032126 Ga0307415_100116934 Ga0307415_1001169342 269
199 3300038443 Ga0395901_0328016 Ga0395901_0328016_301_1164 269
200 3300038443 Ga0395901_0390909 Ga0395901_0390909_290_1153 269
201 3300044712 Ga0453684_0281557 Ga0453684_0281557_266_1126 269
202 3300044712 Ga0453684_0409513 Ga0453684_0409513_184_1044 269
203 3300048903 Ga0496100_0215062 Ga0496100_0215062_54_863 269
204 3300049568 Ga0501031_0232846 Ga0501031_0232846_210_1019 269
205 3300049569 Ga0501032_0164535 Ga0501032_0164535_355_1164 269
206 3300049572 Ga0501036_0246100 Ga0501036_0246100_236_1045 269
207 3300049572 Ga0501036_0287227 Ga0501036_0287227_45_887 269
208 3300049579 Ga0501043_0000451 Ga0501043_0000451_21901_22710 269
209 3300049580 Ga0501046_0257250 Ga0501046_0257250_38_847 269
210 3300049581 Ga0501047_0026991 Ga0501047_0026991_38_847 269
211 3300049582 Ga0501048_0001608 Ga0501048_0001608_3470_4279 269
212 3300049587 Ga0501071_0228503 Ga0501071_0228503_477_1319 269
213 3300049588 Ga0501072_0384783 Ga0501072_0384783_14_856 269
214 3300049589 Ga0501073_0310205 Ga0501073_0310205_93_953 269
215 3300049590 Ga0501074_0165640 Ga0501074_0165640_527_1369 269
216 3300049592 Ga0501076_0267601 Ga0501076_0267601_127_969 269
217 3300049742 Ga0501080_0218795 Ga0501080_0218795_703_1512 269
218 3300049743 Ga0501081_0294739 Ga0501081_0294739_317_1159 269
219 3300049744 Ga0501083_0014396 Ga0501083_0014396_4684_5493 269
220 3300049823 Ga0501044_0221264 Ga0501044_0221264_705_1514 269
221 3300049824 Ga0501045_0070131 Ga0501045_0070131_1731_2540 269
222 3300050507 nmdc:mga05p37_564687_c1 nmdc:mga05p37_564687_c1_84_947 269
223 3300050508 nmdc:mga09592_446234_c1 nmdc:mga09592_446234_c1_237_1100 269
224 3300050508 nmdc:mga09592_58823_c1 nmdc:mga09592_58823_c1_474_1337 269
225 3300054114 Ga0501084_0495665 Ga0501084_0495665_162_980 269
226 3300060353 Ga0501082_0127867 Ga0501082_0127867_1243_2052 269
227 3300060353 Ga0501082_0315563 Ga0501082_0315563_414_1256 269
228 3300061734 Ga0530510_0288637 Ga0530510_0288637_31_873 269
229 3300028654 Ga0265322_10037669 Ga0265322_100376692 270
230 3300031235 Ga0265330_10118334 Ga0265330_101183342 270
231 3300031344 Ga0265316_10172571 Ga0265316_101725711 270
232 3300031711 Ga0265314_10096695 Ga0265314_100966952 270
233 3300003316 rootH1_10067998 rootH1_100679982 272

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00665

rve

Integrase core domain

125

224

0.98

PF13683

rve_3

Integrase core domain

212

279

0.97

PF13333

rve_2

Integrase core domain

231

286

0.96

PF13276

HTH_21

HTH-like domain

43

101

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fu4-assembly1.cif.gz_A crystal structure of the dna binding domain of e.coli fur (ferric uptake regulator) 0.8799 31 74
1mzb-assembly1.cif.gz_A ferric uptake regulator 0.8622 31 71
2o03-assembly1.cif.gz_A-2 crystal structure of furb from m. tuberculosis- a zinc uptake regulator 0.8532 20 72
3qdk-assembly2.cif.gz_C structural insight on mechanism and diverse substrate selection strategy of ribulokinase 0.8362 113 147
2y8g-assembly1.cif.gz_A structure of the ran-binding domain from human ranbp3 (e352a-r353v double mutant) 0.7861 116 147
ID Description Score Start End Superfamily
3mwmB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9057 27 72 1.10.10.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8922 106 267 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8818 106 267 3.30.420.10
af_E7FF82_1_121_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8768 27 72 1.10.10.10
af_Q47718_102_174_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8725 107 166 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A1M4IPX0-F1-model_v4 Integrase, partial 0.9367 116 272 GO:0003676
GO:0015074
GO:0016020
AF-A0A7V8XCI3-F1-model_v4 IS3 family transposase 0.9241 113 271 GO:0003676
GO:0015074
AF-A0A0H2UZ75-F1-model_v4 IS600 ORF2 0.9224 116 271 GO:0003676
GO:0015074
AF-A0A1M4IPX0-F1-model_v4 Integrase, partial 0.9221 116 272 GO:0003676
GO:0015074
GO:0016020
AF-A0A2Z2KQG7-F1-model_v4 Integrase catalytic domain-containing protein 0.9189 116 271 GO:0003676
GO:0015074

Feature Viewer

pLDDT pTM Quality
87.86 0.68 Medium
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Predicted Structure (AlphaFold2)

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