F345820

General Info

Members Datasets Scaffolds Average Seq Length
233 146 466 421

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100059020|Ga0070714_1000590203
Length 402
Sequence MQLLEPQTLAVQDPEVYAAIENEERRQRDNLELIASENYASRAVREANASVMTNKYAEGYPGKRYYGGCEFVDVAETLAIERLKKLFGAAHANVQPHAGAQANMAVLMAVLKPGDTVLGMSLAHGGHLTHGTKVSFSGKLYNAVAYGVRKDTELIDFDQVRELAREHRPKVMIAGASAYPRTMEYAPFREIADEIGATFLVDMAHIAGLVATGLHPSPVPLAEFVTSTTHKTLRGPRGGLILSNEQYAQAIDKSVFPGIQGGPFMHTIAAKAVAFGEALQPAFTAYQRQRAGARLVGGGTDTHLLLVDLTPKNLTGKAVEAYLDEIRITVNKNAIPFDPQKPAVTSGIRIGSPAITSRGFSEADAREVGKIIGEALTDIETGAKKDALRARVAELTSHHDVP

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
54 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
55 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
93 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
96 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
97 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
98 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
99 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
100 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
101 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
112 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
113 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
119 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
120 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
128 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
133 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
134 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
135 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
136 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
145 2857472729 Cohnella sp. R-74144 Isolate Unclassified
146 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 0.43
Isolates 1.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 1.29
Rhizosphere 87.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100059020 3300005435 Bacteria 3289
2 Ga0065712_10069641 3300005290 Bacteria 6938
3 Ga0065715_10166991 3300005293 Bacteria 1578
4 Ga0070658_10008557 3300005327 Bacteria 8227
5 Ga0070670_100030010 3300005331 Bacteria 4682
6 Ga0068869_100100433 3300005334 Bacteria 2188
7 Ga0070682_100000006 3300005337 Bacteria 369078
8 Ga0070660_100021581 3300005339 Bacteria 4751
9 Ga0070689_100000236 3300005340 Bacteria 32378
10 Ga0070661_100192756 3300005344 Bacteria 1555
11 Ga0070671_100000823 3300005355 Bacteria 22482
12 Ga0070688_100125450 3300005365 Bacteria 1725
13 Ga0070667_100121306 3300005367 Bacteria 2274
14 Ga0070705_100049414 3300005440 Bacteria 2442
15 Ga0070708_100004190 3300005445 Bacteria 11330
16 Ga0070708_100017825 3300005445 Bacteria 5933
17 Ga0070708_100019274 3300005445 Bacteria 5730
18 Ga0070708_100047448 3300005445 Bacteria 3794
19 Ga0070663_100090464 3300005455 Bacteria 2267
20 Ga0070706_100002823 3300005467 Bacteria 17369
21 Ga0070706_100022690 3300005467 Bacteria 5779
22 Ga0070706_100057663 3300005467 Bacteria 3584
23 Ga0070706_100106355 3300005467 Bacteria 2610
24 Ga0070706_100118129 3300005467 Bacteria 2470
25 Ga0070706_100254965 3300005467 Bacteria 1638
26 Ga0070707_100004251 3300005468 Bacteria 13408
27 Ga0070707_100004980 3300005468 Bacteria 12449
28 Ga0070707_100005031 3300005468 Bacteria 12392
29 Ga0070707_100009267 3300005468 Bacteria 9138
30 Ga0070707_100128445 3300005468 Bacteria 2463
31 Ga0070707_100133596 3300005468 Bacteria 2413
32 Ga0070707_100252452 3300005468 Bacteria 1716
33 Ga0070698_100000435 3300005471 Bacteria 44441
34 Ga0070698_100019339 3300005471 Bacteria 7153
35 Ga0070698_100020609 3300005471 Bacteria 6912
36 Ga0070698_100031235 3300005471 Bacteria 5521
37 Ga0070698_100147369 3300005471 Bacteria 2302
38 Ga0070699_100058453 3300005518 Bacteria 3340
39 Ga0070699_100133119 3300005518 Bacteria 2192
40 Ga0070699_100210997 3300005518 Bacteria 1729
41 Ga0070697_100048548 3300005536 Bacteria 3442
42 Ga0070697_100058615 3300005536 Bacteria 3134
43 Ga0070697_100134516 3300005536 Bacteria 2075
44 Ga0070672_100000037 3300005543 Bacteria 58587
45 Ga0070672_100169619 3300005543 Bacteria 1814
46 Ga0070696_100029842 3300005546 Bacteria 3730
47 Ga0068855_100010545 3300005563 Bacteria 11143
48 Ga0068855_100264044 3300005563 Bacteria 1917
49 Ga0070664_100018533 3300005564 Bacteria 5721
50 Ga0068854_100068672 3300005578 Bacteria 2585
51 Ga0068852_100031796 3300005616 Bacteria 4362
52 Ga0068864_100000037 3300005618 Bacteria 188796
53 Ga0068864_100157739 3300005618 Bacteria 2061
54 Ga0068858_100000852 3300005842 Bacteria 31583
55 Ga0068858_100093144 3300005842 Bacteria 2805
56 Ga0068860_100010832 3300005843 Bacteria 9000
57 Ga0068860_100121448 3300005843 Bacteria 2502
58 Ga0097621_100027724 3300006237 Bacteria 4457
59 Ga0075428_100065907 3300006844 Bacteria 3966
60 Ga0075428_100090010 3300006844 Bacteria 3347
61 Ga0075430_100031526 3300006846 Bacteria 4500
62 Ga0075431_100029495 3300006847 Bacteria 5648
63 Ga0075433_10006982 3300006852 Bacteria 8952
64 Ga0075433_10012765 3300006852 Bacteria 6801
65 Ga0075434_100008103 3300006871 Bacteria 9745
66 Ga0075434_100016971 3300006871 Bacteria 7004
67 Ga0075434_100021744 3300006871 Bacteria 6238
68 Ga0075434_100088053 3300006871 Bacteria 3106
69 Ga0068865_100012752 3300006881 Bacteria 5298
70 Ga0111539_10341212 3300009094 Bacteria 1744
71 Ga0105245_10000393 3300009098 Bacteria 40696
72 Ga0105245_10013697 3300009098 Bacteria 7064
73 Ga0114129_10000566 3300009147 Bacteria 45463
74 Ga0114129_10003576 3300009147 Bacteria 21870
75 Ga0114129_10027443 3300009147 Bacteria 8060
76 Ga0114129_10197438 3300009147 Bacteria 2728
77 Ga0105242_10085958 3300009176 Bacteria 2638
78 Ga0105248_10100528 3300009177 Bacteria 3259
79 Ga0105248_10217557 3300009177 Bacteria 2151
80 Ga0105238_10003591 3300009551 Bacteria 15461
81 Ga0105249_10019903 3300009553 Bacteria 5993
82 Ga0157369_10087817 3300013105 Bacteria 3320
83 Ga0157374_10015730 3300013296 Bacteria 6644
84 Ga0157378_10022552 3300013297 Bacteria 5540
85 Ga0157378_10091674 3300013297 Bacteria 2763
86 Ga0163162_10009294 3300013306 Bacteria 9560
87 Ga0157375_10000013 3300013308 Bacteria 323500
88 Ga0163163_10007351 3300014325 Bacteria 9717
89 Ga0163163_10073144 3300014325 Bacteria 3418
90 Ga0157380_10031799 3300014326 Bacteria 4054
91 Ga0157380_10189970 3300014326 Bacteria 1812
92 Ga0157377_10000084 3300014745 Bacteria 72556
93 Ga0213873_10000160 3300021358 Bacteria 12653
94 Ga0213874_10008642 3300021377 Bacteria 2489
95 Ga0213875_10010053 3300021388 Bacteria 4758
96 Ga0207705_10033351 3300025909 Bacteria 3678
97 Ga0207705_10043252 3300025909 Bacteria 3236
98 Ga0207684_10002961 3300025910 Bacteria 16831
99 Ga0207684_10002981 3300025910 Bacteria 16775
100 Ga0207684_10035323 3300025910 Bacteria 4244
101 Ga0207684_10041251 3300025910 Bacteria 3914
102 Ga0207684_10049939 3300025910 Bacteria 3548
103 Ga0207684_10060156 3300025910 Bacteria 3226
104 Ga0207695_10106460 3300025913 Bacteria 2790
105 Ga0207657_10020072 3300025919 Bacteria 6328
106 Ga0207646_10001042 3300025922 Bacteria 35346
107 Ga0207646_10001213 3300025922 Bacteria 32422
108 Ga0207646_10002916 3300025922 Bacteria 19838
109 Ga0207646_10004766 3300025922 Bacteria 14598
110 Ga0207646_10006548 3300025922 Bacteria 12025
111 Ga0207646_10088587 3300025922 Bacteria 2769
112 Ga0207646_10091737 3300025922 Bacteria 2718
113 Ga0207694_10004570 3300025924 Bacteria 10786
114 Ga0207650_10154761 3300025925 Bacteria 1812
115 Ga0207659_10016172 3300025926 Bacteria 4850
116 Ga0207687_10000405 3300025927 Bacteria 29242
117 Ga0207644_10000213 3300025931 Bacteria 40008
118 Ga0207670_10106155 3300025936 Bacteria 2014
119 Ga0207704_10012752 3300025938 Bacteria 4179
120 Ga0207691_10000408 3300025940 Bacteria 43056
121 Ga0207691_10026638 3300025940 Bacteria 5424
122 Ga0207689_10116472 3300025942 Bacteria 2197
123 Ga0207661_10130704 3300025944 Bacteria 2150
124 Ga0207679_10033318 3300025945 Bacteria 3623
125 Ga0207667_10001004 3300025949 Bacteria 36004
126 Ga0207667_10004655 3300025949 Bacteria 16818
127 Ga0207667_10035657 3300025949 Bacteria 5336
128 Ga0207667_10073052 3300025949 Bacteria 3565
129 Ga0207640_10178537 3300025981 Bacteria 1590
130 Ga0207703_10000008 3300026035 Bacteria 373718
131 Ga0207703_10026845 3300026035 Bacteria 4535
132 Ga0207678_10048698 3300026067 Bacteria 3663
133 Ga0207702_10107307 3300026078 Bacteria 2476
134 Ga0207648_10001501 3300026089 Bacteria 25704
135 Ga0207676_10000028 3300026095 Bacteria 237195
136 Ga0207674_10027495 3300026116 Bacteria 6016
137 Ga0207683_10111475 3300026121 Bacteria 2450
138 Ga0207698_10022590 3300026142 Bacteria 4375
139 Ga0209968_1001858 3300027526 Bacteria 3208
140 Ga0209999_1002672 3300027543 Bacteria 3152
141 Ga0209970_1000120 3300027614 Bacteria 11609
142 Ga0209983_1000916 3300027665 Bacteria 6466
143 Ga0209974_10008879 3300027876 Bacteria 3425
144 Ga0265356_1000005 3300028017 Bacteria 35950
145 Ga0265338_10000238 3300028800 Bacteria 101800
146 Ga0265760_10010878 3300031090 Bacteria 2599
147 Ga0265332_10027423 3300031238 Bacteria 2495
148 Ga0265325_10000256 3300031241 Bacteria 37890
149 Ga0265339_10006600 3300031249 Bacteria 7595
150 Ga0265331_10050833 3300031250 Bacteria 1986
151 Ga0265327_10020247 3300031251 Bacteria 4060
152 Ga0265316_10009184 3300031344 Bacteria 9107
153 Ga0265313_10000304 3300031595 Bacteria 53361
154 Ga0265342_10004153 3300031712 Bacteria 11527
155 Ga0316576_10012651 3300031727 Bacteria 5581
156 Ga0316577_10031661 3300031733 Bacteria 2955
157 Ga0373957_0012080 3300035120 Bacteria 2899
158 Ga0316574_0000187 3300035398 Bacteria 21138
159 Ga0373935_0078651 3300035692 Bacteria 2139
160 Ga0373927_0056365 3300035695 Bacteria 2540
161 Ga0373937_0036635 3300036401 Bacteria 4470
162 Ga0373937_0156359 3300036401 Bacteria 2137
163 Ga0316584_0076061 3300036712 Bacteria 2515
164 Ga0373925_0085639 3300037068 Bacteria 2402
165 Ga0436364_0004537 3300037853 Bacteria 18831
166 Ga0436364_0068820 3300037853 Bacteria 44278
167 Ga0436364_0551436 3300037853 Bacteria 2088
168 Ga0436364_1185577 3300037853 Bacteria 27424
169 Ga0436364_1391753 3300037853 Bacteria 14572
170 Ga0436365_0412807 3300039437 Bacteria 3007
171 Ga0436365_0782819 3300039437 Bacteria 2146
172 Ga0436365_0898977 3300039437 Bacteria 71829
173 Ga0436365_1235279 3300039437 Bacteria 1890
174 Ga0436360_0050110 3300039438 Bacteria 1329
175 Ga0436360_1034222 3300039438 Bacteria 1650
176 Ga0436360_1204434 3300039438 Bacteria 2403
177 Ga0436361_0213845 3300039447 Bacteria 17348
178 Ga0436361_0571041 3300039447 Bacteria 2120
179 Ga0436361_0702510 3300039447 Bacteria 1379
180 Ga0436361_0717272 3300039447 Bacteria 19726
181 Ga0436363_1171301 3300039450 Bacteria 11628
182 Ga0436362_0579610 3300039453 Bacteria 1971
183 Ga0436362_0646166 3300039453 Bacteria 3483
184 Ga0436362_1096386 3300039453 Bacteria 10692
185 Ga0436362_1225571 3300039453 Bacteria 12630
186 Ga0451577_0000018 3300042876 Bacteria 516495
187 Ga0453684_0000103 3300044712 Bacteria 366458
188 Ga0453684_0000349 3300044712 Bacteria 192484
189 Ga0453684_0010787 3300044712 Bacteria 15496
190 Ga0453684_0022415 3300044712 Bacteria 9368
191 Ga0451576_0084363 3300045051 Bacteria 3304
192 Ga0495630_0097045 3300046517 Bacteria 2229
193 Ga0495586_0041167 3300046535 Bacteria 2488
194 Ga0495667_0001604 3300046559 Bacteria 14986
195 Ga0495657_0000672 3300046675 Bacteria 30911
196 Ga0495658_0071821 3300046683 Bacteria 2012
197 Ga0495613_0012595 3300046689 Bacteria 6289
198 Ga0495613_0079767 3300046689 Bacteria 2380
199 Ga0495624_0115033 3300046690 Bacteria 1653
200 Ga0495581_0069830 3300047315 Bacteria 2031
201 Ga0495674_0052326 3300047319 Bacteria 3594
202 Ga0495676_0079827 3300047321 Bacteria 2486
203 Ga0495684_0029522 3300047471 Bacteria 4208
204 Ga0496102_0239871 3300048905 Bacteria 1709
205 Ga0496103_0065800 3300048906 Bacteria 2262
206 Ga0496106_0214695 3300048909 Bacteria 1533
207 Ga0496116_0022905 3300048919 Bacteria 4663
208 Ga0496116_0059293 3300048919 Bacteria 2490
209 Ga0496117_0041146 3300048920 Bacteria 3390
210 Ga0496119_0000369 3300048922 Bacteria 62502
211 Ga0496120_0000368 3300048923 Bacteria 73340
212 Ga0496122_0011322 3300048925 Bacteria 9054
213 Ga0496122_0094747 3300048925 Bacteria 2020
214 Ga0496124_0000269 3300048927 Bacteria 100125
215 Ga0496125_0148681 3300048928 Bacteria 1614
216 Ga0496126_0000481 3300048929 Bacteria 79161
217 Ga0496126_0003339 3300048929 Bacteria 20399
218 Ga0501081_0074774 3300049743 Bacteria 2364
219 nmdc:mga00v17_67315_c1 3300050491 Bacteria 2213
220 nmdc:mga05p37_146798_c1 3300050507 Bacteria 2887
221 nmdc:mga05p37_2027_c1 3300050507 Bacteria 23615
222 nmdc:mga05p37_23466_c1 3300050507 Bacteria 7485
223 nmdc:mga05p37_6665_c1 3300050507 Bacteria 13619
224 nmdc:mga06r32_71876_c1 3300050510 Bacteria 3349
225 nmdc:mga0n895_15265_c1 3300050512 Bacteria 6998
226 nmdc:mga0n895_69488_c1 3300050512 Bacteria 3489
227 nmdc:mga0n895_7107_c1 3300050512 Bacteria 9571
228 nmdc:mga0a205_10194_c1 3300050515 Bacteria 8631
229 nmdc:mga0a205_14669_c1 3300050515 Bacteria 7312
230 nmdc:mga0a205_5264_c1 3300050515 Bacteria 11649
231 2556063988 2554235469 Bacteria 3590176
232 2857477510 2857472729 Bacteria 6568124
233 2929298029 2929297113 Bacteria 3141306
234 Ga0070714_100059020
235 Ga0065712_10069641
236 Ga0065715_10166991
237 Ga0070658_10008557
238 Ga0070670_100030010
239 Ga0068869_100100433
240 Ga0070682_100000006
241 Ga0070660_100021581
242 Ga0070689_100000236
243 Ga0070661_100192756
244 Ga0070671_100000823
245 Ga0070688_100125450
246 Ga0070667_100121306
247 Ga0070705_100049414
248 Ga0070708_100004190
249 Ga0070708_100017825
250 Ga0070708_100019274
251 Ga0070708_100047448
252 Ga0070663_100090464
253 Ga0070706_100002823
254 Ga0070706_100022690
255 Ga0070706_100057663
256 Ga0070706_100106355
257 Ga0070706_100118129
258 Ga0070706_100254965
259 Ga0070707_100004251
260 Ga0070707_100004980
261 Ga0070707_100005031
262 Ga0070707_100009267
263 Ga0070707_100128445
264 Ga0070707_100133596
265 Ga0070707_100252452
266 Ga0070698_100000435
267 Ga0070698_100019339
268 Ga0070698_100020609
269 Ga0070698_100031235
270 Ga0070698_100147369
271 Ga0070699_100058453
272 Ga0070699_100133119
273 Ga0070699_100210997
274 Ga0070697_100048548
275 Ga0070697_100058615
276 Ga0070697_100134516
277 Ga0070672_100000037
278 Ga0070672_100169619
279 Ga0070696_100029842
280 Ga0068855_100010545
281 Ga0068855_100264044
282 Ga0070664_100018533
283 Ga0068854_100068672
284 Ga0068852_100031796
285 Ga0068864_100000037
286 Ga0068864_100157739
287 Ga0068858_100000852
288 Ga0068858_100093144
289 Ga0068860_100010832
290 Ga0068860_100121448
291 Ga0097621_100027724
292 Ga0075428_100065907
293 Ga0075428_100090010
294 Ga0075430_100031526
295 Ga0075431_100029495
296 Ga0075433_10006982
297 Ga0075433_10012765
298 Ga0075434_100008103
299 Ga0075434_100016971
300 Ga0075434_100021744
301 Ga0075434_100088053
302 Ga0068865_100012752
303 Ga0111539_10341212
304 Ga0105245_10000393
305 Ga0105245_10013697
306 Ga0114129_10000566
307 Ga0114129_10003576
308 Ga0114129_10027443
309 Ga0114129_10197438
310 Ga0105242_10085958
311 Ga0105248_10100528
312 Ga0105248_10217557
313 Ga0105238_10003591
314 Ga0105249_10019903
315 Ga0157369_10087817
316 Ga0157374_10015730
317 Ga0157378_10022552
318 Ga0157378_10091674
319 Ga0163162_10009294
320 Ga0157375_10000013
321 Ga0163163_10007351
322 Ga0163163_10073144
323 Ga0157380_10031799
324 Ga0157380_10189970
325 Ga0157377_10000084
326 Ga0213873_10000160
327 Ga0213874_10008642
328 Ga0213875_10010053
329 Ga0207705_10033351
330 Ga0207705_10043252
331 Ga0207684_10002961
332 Ga0207684_10002981
333 Ga0207684_10035323
334 Ga0207684_10041251
335 Ga0207684_10049939
336 Ga0207684_10060156
337 Ga0207695_10106460
338 Ga0207657_10020072
339 Ga0207646_10001042
340 Ga0207646_10001213
341 Ga0207646_10002916
342 Ga0207646_10004766
343 Ga0207646_10006548
344 Ga0207646_10088587
345 Ga0207646_10091737
346 Ga0207694_10004570
347 Ga0207650_10154761
348 Ga0207659_10016172
349 Ga0207687_10000405
350 Ga0207644_10000213
351 Ga0207670_10106155
352 Ga0207704_10012752
353 Ga0207691_10000408
354 Ga0207691_10026638
355 Ga0207689_10116472
356 Ga0207661_10130704
357 Ga0207679_10033318
358 Ga0207667_10001004
359 Ga0207667_10004655
360 Ga0207667_10035657
361 Ga0207667_10073052
362 Ga0207640_10178537
363 Ga0207703_10000008
364 Ga0207703_10026845
365 Ga0207678_10048698
366 Ga0207702_10107307
367 Ga0207648_10001501
368 Ga0207676_10000028
369 Ga0207674_10027495
370 Ga0207683_10111475
371 Ga0207698_10022590
372 Ga0209968_1001858
373 Ga0209999_1002672
374 Ga0209970_1000120
375 Ga0209983_1000916
376 Ga0209974_10008879
377 Ga0265356_1000005
378 Ga0265338_10000238
379 Ga0265760_10010878
380 Ga0265332_10027423
381 Ga0265325_10000256
382 Ga0265339_10006600
383 Ga0265331_10050833
384 Ga0265327_10020247
385 Ga0265316_10009184
386 Ga0265313_10000304
387 Ga0265342_10004153
388 Ga0316576_10012651
389 Ga0316577_10031661
390 Ga0373957_0012080
391 Ga0316574_0000187
392 Ga0373935_0078651
393 Ga0373927_0056365
394 Ga0373937_0036635
395 Ga0373937_0156359
396 Ga0316584_0076061
397 Ga0373925_0085639
398 Ga0436364_0004537
399 Ga0436364_0068820
400 Ga0436364_0551436
401 Ga0436364_1185577
402 Ga0436364_1391753
403 Ga0436365_0412807
404 Ga0436365_0782819
405 Ga0436365_0898977
406 Ga0436365_1235279
407 Ga0436360_0050110
408 Ga0436360_1034222
409 Ga0436360_1204434
410 Ga0436361_0213845
411 Ga0436361_0571041
412 Ga0436361_0702510
413 Ga0436361_0717272
414 Ga0436363_1171301
415 Ga0436362_0579610
416 Ga0436362_0646166
417 Ga0436362_1096386
418 Ga0436362_1225571
419 Ga0451577_0000018
420 Ga0453684_0000103
421 Ga0453684_0000349
422 Ga0453684_0010787
423 Ga0453684_0022415
424 Ga0451576_0084363
425 Ga0495630_0097045
426 Ga0495586_0041167
427 Ga0495667_0001604
428 Ga0495657_0000672
429 Ga0495658_0071821
430 Ga0495613_0012595
431 Ga0495613_0079767
432 Ga0495624_0115033
433 Ga0495581_0069830
434 Ga0495674_0052326
435 Ga0495676_0079827
436 Ga0495684_0029522
437 Ga0496102_0239871
438 Ga0496103_0065800
439 Ga0496106_0214695
440 Ga0496116_0022905
441 Ga0496116_0059293
442 Ga0496117_0041146
443 Ga0496119_0000369
444 Ga0496120_0000368
445 Ga0496122_0011322
446 Ga0496122_0094747
447 Ga0496124_0000269
448 Ga0496125_0148681
449 Ga0496126_0000481
450 Ga0496126_0003339
451 Ga0501081_0074774
452 nmdc:mga00v17_67315_c1
453 nmdc:mga05p37_146798_c1
454 nmdc:mga05p37_2027_c1
455 nmdc:mga05p37_23466_c1
456 nmdc:mga05p37_6665_c1
457 nmdc:mga06r32_71876_c1
458 nmdc:mga0n895_15265_c1
459 nmdc:mga0n895_69488_c1
460 nmdc:mga0n895_7107_c1
461 nmdc:mga0a205_10194_c1
462 nmdc:mga0a205_14669_c1
463 nmdc:mga0a205_5264_c1
464 2556063988
465 2857477510
466 2929298029

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00464

SHMT

Serine hydroxymethyltransferase

9

372

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
2w7m-assembly1.cif.gz_A-2 crystal structure of y61absshmt obtained in the presence of glycine and 5-formyl tetrahydrofolate 0.9827 8 407
2vmo-assembly1.cif.gz_A crystal structure of n341absshmt gly external aldimine 0.982 8 407
2vi9-assembly1.cif.gz_A crystal structure of s172absshmt glycine external aldimine 0.982 8 407
2vmu-assembly1.cif.gz_A-2 crystal structure of y60absshmt crystallized in the presence of l- allo-thr 0.9819 8 407
2w7f-assembly1.cif.gz_A crystal structure of y51fbsshmt l-ser external aldimine 0.9818 8 407
ID Description Score Start End Superfamily
2dkjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9805 37 285 3.40.640.10
4msoB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9751 279 413 3.90.1150.10
af_Q2FWE5_284_405_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9719 288 406 3.90.1150.10
2dkjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9652 37 285 3.40.640.10
af_Q6NYR0_52_322_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9633 37 282 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A6N6Q1J6-F1-model_v4 Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1) 0.9889 7 413 GO:0004372
GO:0004725
GO:0005829
GO:0005975
GO:0016861
GO:0019264
GO:0030170
GO:0035999
AF-M5RRZ4-F1-model_v4 Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1) 0.9886 8 412 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0035999
AF-A0A7C3DWQ2-F1-model_v4 Serine hydroxymethyltransferase (SHMT) (Serine methylase) (EC 2.1.2.1) 0.9879 7 413 GO:0004372
GO:0004725
GO:0005829
GO:0005975
GO:0016861
GO:0019264
GO:0030170
GO:0035999
AF-A0A497AB24-F1-model_v4 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.9878 150 413 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0035999
AF-Q3KDV1-F1-model_v4 Serine hydroxymethyltransferase 1 (SHMT 1) (Serine methylase 1) (EC 2.1.2.1) 0.9876 6 413 GO:0004372
GO:0005829
GO:0019264
GO:0030170
GO:0035999

Map