F345743

General Info

Members Datasets Scaffolds Average Seq Length
233 163 466 144

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10547202|Ga0070658_105472022
Length 168
Sequence VANVPAARHLLRAKDLADARYFEPLAVADLAAAAGLSPAHFSRRFKATFGESPHQYLLTRRLERAAALLRATDWSVAAICFAVGAQSVGSFTASFHRVFGMPPLAYRAAFPPAERHLRIPRCVALAYGRPQNRTFREDNTRGASLALTSANAHGGPDDQDRERAVLGA

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
90 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
91 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
92 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
93 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
94 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
97 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
98 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
108 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
116 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
117 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
125 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
126 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
127 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
128 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
131 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
134 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
163 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.85
Metatranscriptomes 2.15
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.43
Nodule 0
Rhizoplane 10.3
Rhizosphere 86.27
Stem 0
Stem Tuber 0
Unclassified 0.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10547202 3300005327 Bacteria 1002
2 Ga0070683_100042478 3300005329 Bacteria 4186
3 Ga0070683_100512947 3300005329 Bacteria 1146
4 Ga0070683_100583304 3300005329 Bacteria 1069
5 Ga0070666_10265647 3300005335 Bacteria 1217
6 Ga0070680_100011769 3300005336 Bacteria 6785
7 Ga0070680_100257933 3300005336 Bacteria 1474
8 Ga0070682_100026299 3300005337 Bacteria 3482
9 Ga0068868_100028022 3300005338 Bacteria 4302
10 Ga0070660_100259143 3300005339 Bacteria 1420
11 Ga0070689_100551564 3300005340 Bacteria 993
12 Ga0070691_10058830 3300005341 Bacteria 1846
13 Ga0070691_10066442 3300005341 Bacteria 1743
14 Ga0070661_100245253 3300005344 Bacteria 1381
15 Ga0070668_100153886 3300005347 Bacteria 1862
16 Ga0070674_100022999 3300005356 Bacteria 4026
17 Ga0070674_100099569 3300005356 Bacteria 2115
18 Ga0070667_100423499 3300005367 Bacteria 1214
19 Ga0070709_10027698 3300005434 Bacteria 3371
20 Ga0070714_100000236 3300005435 Bacteria 43197
21 Ga0070714_100194957 3300005435 Bacteria 1850
22 Ga0070714_100296966 3300005435 Bacteria 1505
23 Ga0070714_101174437 3300005435 Bacteria 748
24 Ga0070713_100023263 3300005436 Bacteria 4805
25 Ga0070713_100072851 3300005436 Bacteria 2906
26 Ga0070713_100283848 3300005436 Bacteria 1519
27 Ga0070705_100075604 3300005440 Bacteria 2051
28 Ga0070700_100060272 3300005441 Bacteria 2391
29 Ga0070663_100101877 3300005455 Bacteria 2144
30 Ga0070663_100264363 3300005455 Bacteria 1365
31 Ga0070681_10028621 3300005458 Bacteria 5603
32 Ga0070681_10772277 3300005458 Bacteria 878
33 Ga0070679_100025637 3300005530 Bacteria 5787
34 Ga0070679_100066685 3300005530 Bacteria 3588
35 Ga0070684_100079284 3300005535 Bacteria 2903
36 Ga0070686_100429972 3300005544 Bacteria 1010
37 Ga0070696_101017610 3300005546 Bacteria 693
38 Ga0070693_100186311 3300005547 Bacteria 1339
39 Ga0070665_100789271 3300005548 Bacteria 963
40 Ga0070704_100259666 3300005549 Bacteria 1430
41 Ga0070704_100631566 3300005549 Bacteria 944
42 Ga0068857_100450141 3300005577 Bacteria 1204
43 Ga0068857_100491630 3300005577 Bacteria 1151
44 Ga0068856_100119760 3300005614 Bacteria 2634
45 Ga0068856_100542241 3300005614 Bacteria 1184
46 Ga0068852_100268865 3300005616 Bacteria 1640
47 Ga0068858_100000526 3300005842 Bacteria 40242
48 Ga0068858_100035699 3300005842 Bacteria 4610
49 Ga0068862_100897528 3300005844 Bacteria 871
50 Ga0081538_10017892 3300005981 Bacteria 5354
51 Ga0081538_10031638 3300005981 Bacteria 3564
52 Ga0070717_10105098 3300006028 Bacteria 2403
53 Ga0070716_100205316 3300006173 Bacteria 1313
54 Ga0070716_100253581 3300006173 Bacteria 1200
55 Ga0070712_100397390 3300006175 Bacteria 1138
56 Ga0070712_100843126 3300006175 Bacteria 788
57 Ga0075431_100661967 3300006847 Bacteria 1024
58 Ga0075433_10058198 3300006852 Bacteria 3380
59 Ga0075434_100015977 3300006871 Bacteria 7211
60 Ga0111539_11247079 3300009094 Bacteria 863
61 Ga0111539_11597473 3300009094 Bacteria 756
62 Ga0111539_12272809 3300009094 Unclassified 629
63 Ga0105245_11367871 3300009098 Bacteria 758
64 Ga0105243_10034525 3300009148 Bacteria 3916
65 Ga0105243_10329846 3300009148 Bacteria 1393
66 Ga0105243_10822907 3300009148 Bacteria 917
67 Ga0105241_10142620 3300009174 Bacteria 1952
68 Ga0105242_10258696 3300009176 Bacteria 1571
69 Ga0105246_10150020 3300011119 Bacteria 1763
70 Ga0157370_10170296 3300013104 Bacteria 2024
71 Ga0157369_10064539 3300013105 Bacteria 3943
72 Ga0157369_10217667 3300013105 Bacteria 2000
73 Ga0157369_11600373 3300013105 Bacteria 662
74 Ga0157378_11584067 3300013297 Bacteria 701
75 Ga0157372_11101855 3300013307 Bacteria 919
76 Ga0157372_12159566 3300013307 Bacteria 640
77 Ga0163163_10528668 3300014325 Bacteria 1242
78 Ga0157380_10098848 3300014326 Bacteria 2425
79 Ga0157380_13034927 3300014326 Bacteria 535
80 Ga0157377_10182661 3300014745 Bacteria 1320
81 Ga0157379_10047431 3300014968 Bacteria 3833
82 Ga0157376_11719917 3300014969 Bacteria 663
83 Ga0206353_10480493 3300020082 Bacteria 2460
84 Ga0206353_11124072 3300020082 Bacteria 3178
85 Ga0154015_1423198 3300020610 Bacteria 1742
86 Ga0224712_10183654 3300022467 Bacteria 943
87 Ga0207688_10176501 3300025901 Bacteria 1272
88 Ga0207680_10190777 3300025903 Bacteria 1391
89 Ga0207647_10126345 3300025904 Bacteria 1505
90 Ga0207705_10569912 3300025909 Bacteria 880
91 Ga0207707_10038092 3300025912 Bacteria 4201
92 Ga0207707_10518224 3300025912 Bacteria 1015
93 Ga0207693_10275715 3300025915 Bacteria 1318
94 Ga0207663_10449754 3300025916 Bacteria 993
95 Ga0207660_10030024 3300025917 Bacteria 3734
96 Ga0207660_10276920 3300025917 Bacteria 1330
97 Ga0207657_10024275 3300025919 Bacteria 5621
98 Ga0207652_10329583 3300025921 Bacteria 1378
99 Ga0207687_11107957 3300025927 Bacteria 680
100 Ga0207700_10034740 3300025928 Bacteria 3623
101 Ga0207700_10077157 3300025928 Bacteria 2587
102 Ga0207700_10301733 3300025928 Bacteria 1383
103 Ga0207700_10558330 3300025928 Bacteria 1017
104 Ga0207664_10001113 3300025929 Bacteria 17897
105 Ga0207664_10274209 3300025929 Bacteria 1478
106 Ga0207664_10417255 3300025929 Bacteria 1195
107 Ga0207664_10712677 3300025929 Bacteria 902
108 Ga0207706_11176477 3300025933 Bacteria 638
109 Ga0207686_10127646 3300025934 Bacteria 1740
110 Ga0207686_10529662 3300025934 Bacteria 918
111 Ga0207709_10012033 3300025935 Bacteria 4772
112 Ga0207709_10077870 3300025935 Bacteria 2127
113 Ga0207669_10099992 3300025937 Bacteria 1914
114 Ga0207665_10027024 3300025939 Bacteria 3791
115 Ga0207665_10209380 3300025939 Bacteria 1423
116 Ga0207661_10029581 3300025944 Bacteria 4209
117 Ga0207651_10244403 3300025960 Bacteria 1465
118 Ga0207668_10172553 3300025972 Bacteria 1697
119 Ga0207640_10270798 3300025981 Bacteria 1328
120 Ga0207658_10233924 3300025986 Bacteria 1553
121 Ga0207677_10078976 3300026023 Bacteria 2352
122 Ga0207703_10000170 3300026035 Bacteria 75814
123 Ga0207703_10197493 3300026035 Bacteria 1786
124 Ga0207702_10299659 3300026078 Bacteria 1525
125 Ga0207702_10698903 3300026078 Bacteria 999
126 Ga0207674_10282749 3300026116 Bacteria 1607
127 Ga0207674_11339039 3300026116 Bacteria 685
128 Ga0207698_10188686 3300026142 Bacteria 1834
129 Ga0268266_10000045 3300028379 Bacteria 312955
130 Ga0268266_10743960 3300028379 Bacteria 946
131 Ga0268265_10436395 3300028380 Bacteria 1220
132 Ga0268264_10197737 3300028381 Bacteria 1837
133 Ga0265337_1000159 3300028556 Bacteria 34586
134 Ga0265326_10000005 3300028558 Bacteria 257124
135 Ga0265326_10004655 3300028558 Bacteria 4375
136 Ga0265319_1002200 3300028563 Bacteria 10856
137 Ga0265334_10000046 3300028573 Bacteria 93490
138 Ga0265334_10001543 3300028573 Bacteria 11113
139 Ga0265322_10003540 3300028654 Bacteria 4704
140 Ga0265336_10008197 3300028666 Bacteria 3676
141 Ga0265338_10000246 3300028800 Bacteria 99261
142 Ga0265338_10002244 3300028800 Bacteria 29404
143 Ga0265338_10002712 3300028800 Bacteria 25982
144 Ga0265338_10006128 3300028800 Bacteria 15434
145 Ga0265332_10004036 3300031238 Bacteria 6978
146 Ga0265320_10083392 3300031240 Bacteria 1490
147 Ga0265325_10005970 3300031241 Bacteria 7458
148 Ga0265340_10006813 3300031247 Bacteria 6251
149 Ga0265339_10013159 3300031249 Bacteria 5022
150 Ga0265316_10062284 3300031344 Bacteria 2895
151 Ga0307408_100141803 3300031548 Bacteria 1887
152 Ga0265314_10007678 3300031711 Bacteria 9326
153 Ga0265314_10196743 3300031711 Bacteria 1195
154 Ga0265342_10006954 3300031712 Bacteria 8360
155 Ga0307405_10044102 3300031731 Bacteria 2725
156 Ga0307410_10055320 3300031852 Bacteria 2693
157 Ga0307406_10045654 3300031901 Bacteria 2752
158 Ga0307407_10003704 3300031903 Bacteria 6335
159 Ga0307412_10035863 3300031911 Bacteria 3172
160 Ga0307409_100297994 3300031995 Bacteria 1498
161 Ga0307416_100041206 3300032002 Bacteria 3594
162 Ga0307414_10031390 3300032004 Bacteria 3484
163 Ga0307411_10003781 3300032005 Bacteria 7110
164 Ga0307415_100006911 3300032126 Bacteria 6162
165 Ga0316212_1004267 3300033547 Bacteria 2074
166 Ga0373955_0414431 3300035172 Bacteria 819
167 Ga0372808_011921 3300036459 Bacteria 1232
168 Ga0373925_0000008 3300037068 Bacteria 249158
169 Ga0373925_0161158 3300037068 Bacteria 1767
170 Ga0395900_0045901 3300037418 Bacteria 4500
171 Ga0395900_0143955 3300037418 Bacteria 2439
172 Ga0395898_0055745 3300037466 Bacteria 3855
173 Ga0395898_1270259 3300037466 Bacteria 666
174 Ga0395905_0953020 3300037471 Bacteria 761
175 Ga0395901_0016830 3300038443 Bacteria 7452
176 Ga0395901_0028362 3300038443 Bacteria 5756
177 Ga0395901_0558449 3300038443 Bacteria 1159
178 Ga0436365_0259351 3300039437 Bacteria 1399
179 Ga0451802_1482933 3300041460 Bacteria 640
180 Ga0451807_1041513 3300041486 Bacteria 1132
181 Ga0466963_0199272 3300044694 Bacteria 1400
182 Ga0466968_0598186 3300044735 Bacteria 557
183 Ga0466959_0445569 3300045049 Bacteria 878
184 Ga0466967_0156227 3300045976 Bacteria 2137
185 Ga0495603_0089037 3300046455 Bacteria 1806
186 Ga0495603_0243537 3300046455 Bacteria 1036
187 Ga0495591_067779 3300046458 Bacteria 933
188 Ga0495652_0000023 3300046529 Bacteria 168049
189 Ga0495652_0209797 3300046529 Bacteria 1471
190 Ga0495652_0452080 3300046529 Bacteria 899
191 Ga0495588_0139357 3300046674 Bacteria 1281
192 Ga0495646_0309645 3300046680 Bacteria 834
193 Ga0495604_0338634 3300047317 Bacteria 1002
194 Ga0495680_0171868 3300047322 Bacteria 1569
195 Ga0496100_0118060 3300048903 Bacteria 1852
196 Ga0496101_0266250 3300048904 Bacteria 1337
197 Ga0496102_0280824 3300048905 Bacteria 1570
198 Ga0496104_0001134 3300048907 Bacteria 22797
199 Ga0496105_0000101 3300048908 Bacteria 58062
200 Ga0496106_0057502 3300048909 Bacteria 2941
201 Ga0496106_0170226 3300048909 Bacteria 1726
202 Ga0496106_0623262 3300048909 Bacteria 863
203 Ga0496107_0397952 3300048910 Bacteria 1024
204 Ga0496109_0079611 3300048912 Bacteria 3019
205 Ga0496110_0297365 3300048913 Bacteria 1470
206 Ga0496110_0325522 3300048913 Bacteria 1400
207 Ga0496111_0151851 3300048914 Unclassified 1718
208 Ga0496112_0126373 3300048915 Bacteria 2528
209 Ga0496112_0347822 3300048915 Bacteria 1425
210 Ga0496112_0494251 3300048915 Bacteria 1159
211 Ga0496112_1132008 3300048915 Bacteria 700
212 Ga0496113_0204130 3300048916 Bacteria 1572
213 Ga0496113_0877317 3300048916 Bacteria 710
214 Ga0496114_0202594 3300048917 Bacteria 1738
215 Ga0496115_0000035 3300048918 Bacteria 134475
216 Ga0496115_0818494 3300048918 Bacteria 724
217 Ga0496119_0090129 3300048922 Bacteria 1745
218 Ga0496120_0424495 3300048923 Bacteria 583
219 Ga0496126_0567907 3300048929 Bacteria 898
220 Ga0496126_0613690 3300048929 Bacteria 855
221 Ga0501047_0797890 3300049581 Bacteria 759
222 Ga0501067_0022024 3300049583 Bacteria 3526
223 Ga0501074_0339480 3300049590 Bacteria 1066
224 Ga0501080_0128855 3300049742 Bacteria 2343
225 nmdc:mga06r32_179012_c1 3300050510 Bacteria 2105
226 nmdc:mga06r32_883264_c1 3300050510 Bacteria 851
227 nmdc:mga08y16_148352_c1 3300050511 Bacteria 2438
228 nmdc:mga0n895_11821_c1 3300050512 Bacteria 7805
229 nmdc:mga0a205_22691_c1 3300050515 Bacteria 5949
230 nmdc:mga0sz30_437533_c1 3300050516 Bacteria 587
231 Ga0495601_0027044 3300053077 Bacteria 3545
232 Ga0495601_0062506 3300053077 Bacteria 2365
233 Ga0495601_0063072 3300053077 Bacteria 2355
234 Ga0070658_10547202
235 Ga0070683_100042478
236 Ga0070683_100512947
237 Ga0070683_100583304
238 Ga0070666_10265647
239 Ga0070680_100011769
240 Ga0070680_100257933
241 Ga0070682_100026299
242 Ga0068868_100028022
243 Ga0070660_100259143
244 Ga0070689_100551564
245 Ga0070691_10058830
246 Ga0070691_10066442
247 Ga0070661_100245253
248 Ga0070668_100153886
249 Ga0070674_100022999
250 Ga0070674_100099569
251 Ga0070667_100423499
252 Ga0070709_10027698
253 Ga0070714_100000236
254 Ga0070714_100194957
255 Ga0070714_100296966
256 Ga0070714_101174437
257 Ga0070713_100023263
258 Ga0070713_100072851
259 Ga0070713_100283848
260 Ga0070705_100075604
261 Ga0070700_100060272
262 Ga0070663_100101877
263 Ga0070663_100264363
264 Ga0070681_10028621
265 Ga0070681_10772277
266 Ga0070679_100025637
267 Ga0070679_100066685
268 Ga0070684_100079284
269 Ga0070686_100429972
270 Ga0070696_101017610
271 Ga0070693_100186311
272 Ga0070665_100789271
273 Ga0070704_100259666
274 Ga0070704_100631566
275 Ga0068857_100450141
276 Ga0068857_100491630
277 Ga0068856_100119760
278 Ga0068856_100542241
279 Ga0068852_100268865
280 Ga0068858_100000526
281 Ga0068858_100035699
282 Ga0068862_100897528
283 Ga0081538_10017892
284 Ga0081538_10031638
285 Ga0070717_10105098
286 Ga0070716_100205316
287 Ga0070716_100253581
288 Ga0070712_100397390
289 Ga0070712_100843126
290 Ga0075431_100661967
291 Ga0075433_10058198
292 Ga0075434_100015977
293 Ga0111539_11247079
294 Ga0111539_11597473
295 Ga0111539_12272809
296 Ga0105245_11367871
297 Ga0105243_10034525
298 Ga0105243_10329846
299 Ga0105243_10822907
300 Ga0105241_10142620
301 Ga0105242_10258696
302 Ga0105246_10150020
303 Ga0157370_10170296
304 Ga0157369_10064539
305 Ga0157369_10217667
306 Ga0157369_11600373
307 Ga0157378_11584067
308 Ga0157372_11101855
309 Ga0157372_12159566
310 Ga0163163_10528668
311 Ga0157380_10098848
312 Ga0157380_13034927
313 Ga0157377_10182661
314 Ga0157379_10047431
315 Ga0157376_11719917
316 Ga0206353_10480493
317 Ga0206353_11124072
318 Ga0154015_1423198
319 Ga0224712_10183654
320 Ga0207688_10176501
321 Ga0207680_10190777
322 Ga0207647_10126345
323 Ga0207705_10569912
324 Ga0207707_10038092
325 Ga0207707_10518224
326 Ga0207693_10275715
327 Ga0207663_10449754
328 Ga0207660_10030024
329 Ga0207660_10276920
330 Ga0207657_10024275
331 Ga0207652_10329583
332 Ga0207687_11107957
333 Ga0207700_10034740
334 Ga0207700_10077157
335 Ga0207700_10301733
336 Ga0207700_10558330
337 Ga0207664_10001113
338 Ga0207664_10274209
339 Ga0207664_10417255
340 Ga0207664_10712677
341 Ga0207706_11176477
342 Ga0207686_10127646
343 Ga0207686_10529662
344 Ga0207709_10012033
345 Ga0207709_10077870
346 Ga0207669_10099992
347 Ga0207665_10027024
348 Ga0207665_10209380
349 Ga0207661_10029581
350 Ga0207651_10244403
351 Ga0207668_10172553
352 Ga0207640_10270798
353 Ga0207658_10233924
354 Ga0207677_10078976
355 Ga0207703_10000170
356 Ga0207703_10197493
357 Ga0207702_10299659
358 Ga0207702_10698903
359 Ga0207674_10282749
360 Ga0207674_11339039
361 Ga0207698_10188686
362 Ga0268266_10000045
363 Ga0268266_10743960
364 Ga0268265_10436395
365 Ga0268264_10197737
366 Ga0265337_1000159
367 Ga0265326_10000005
368 Ga0265326_10004655
369 Ga0265319_1002200
370 Ga0265334_10000046
371 Ga0265334_10001543
372 Ga0265322_10003540
373 Ga0265336_10008197
374 Ga0265338_10000246
375 Ga0265338_10002244
376 Ga0265338_10002712
377 Ga0265338_10006128
378 Ga0265332_10004036
379 Ga0265320_10083392
380 Ga0265325_10005970
381 Ga0265340_10006813
382 Ga0265339_10013159
383 Ga0265316_10062284
384 Ga0307408_100141803
385 Ga0265314_10007678
386 Ga0265314_10196743
387 Ga0265342_10006954
388 Ga0307405_10044102
389 Ga0307410_10055320
390 Ga0307406_10045654
391 Ga0307407_10003704
392 Ga0307412_10035863
393 Ga0307409_100297994
394 Ga0307416_100041206
395 Ga0307414_10031390
396 Ga0307411_10003781
397 Ga0307415_100006911
398 Ga0316212_1004267
399 Ga0373955_0414431
400 Ga0372808_011921
401 Ga0373925_0000008
402 Ga0373925_0161158
403 Ga0395900_0045901
404 Ga0395900_0143955
405 Ga0395898_0055745
406 Ga0395898_1270259
407 Ga0395905_0953020
408 Ga0395901_0016830
409 Ga0395901_0028362
410 Ga0395901_0558449
411 Ga0436365_0259351
412 Ga0451802_1482933
413 Ga0451807_1041513
414 Ga0466963_0199272
415 Ga0466968_0598186
416 Ga0466959_0445569
417 Ga0466967_0156227
418 Ga0495603_0089037
419 Ga0495603_0243537
420 Ga0495591_067779
421 Ga0495652_0000023
422 Ga0495652_0209797
423 Ga0495652_0452080
424 Ga0495588_0139357
425 Ga0495646_0309645
426 Ga0495604_0338634
427 Ga0495680_0171868
428 Ga0496100_0118060
429 Ga0496101_0266250
430 Ga0496102_0280824
431 Ga0496104_0001134
432 Ga0496105_0000101
433 Ga0496106_0057502
434 Ga0496106_0170226
435 Ga0496106_0623262
436 Ga0496107_0397952
437 Ga0496109_0079611
438 Ga0496110_0297365
439 Ga0496110_0325522
440 Ga0496111_0151851
441 Ga0496112_0126373
442 Ga0496112_0347822
443 Ga0496112_0494251
444 Ga0496112_1132008
445 Ga0496113_0204130
446 Ga0496113_0877317
447 Ga0496114_0202594
448 Ga0496115_0000035
449 Ga0496115_0818494
450 Ga0496119_0090129
451 Ga0496120_0424495
452 Ga0496126_0567907
453 Ga0496126_0613690
454 Ga0501047_0797890
455 Ga0501067_0022024
456 Ga0501074_0339480
457 Ga0501080_0128855
458 nmdc:mga06r32_179012_c1
459 nmdc:mga06r32_883264_c1
460 nmdc:mga08y16_148352_c1
461 nmdc:mga0n895_11821_c1
462 nmdc:mga0a205_22691_c1
463 nmdc:mga0sz30_437533_c1
464 Ga0495601_0027044
465 Ga0495601_0062506
466 Ga0495601_0063072

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

30

109

0.98

PF00165

HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

20

58

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w5w-assembly1.cif.gz_J cryo-em structure of soxs-dependent transcription activation complex with micf promoter dna 0.909 6 107
7w5w-assembly1.cif.gz_J cryo-em structure of soxs-dependent transcription activation complex with micf promoter dna 0.8625 6 107
7w5x-assembly1.cif.gz_K cryo-em structure of soxs-dependent transcription activation complex with zwf promoter dna 0.8617 9 108
3mn2-assembly2.cif.gz_B the crystal structure of a probable arac family transcriptional regulator from rhodopseudomonas palustris cga009 0.8598 8 112
7w5y-assembly1.cif.gz_K cryo-em structure of soxs-dependent transcription activation complex with fpr promoter dna 0.8583 14 108
ID Description Score Start End Superfamily
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9979 61 110 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9725 63 107 1.10.10.60
3lsgC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9539 63 107 1.10.10.60
5suwA03 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9468 54 110 1.10.10.60
3lsgB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9461 63 107 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7X1P7Z7-F1-model_v4 Helix-turn-helix domain-containing protein 0.9705 9 110 GO:0003700
GO:0008270
GO:0016491
GO:0043565
AF-A0A7X7QXI8-F1-model_v4 AraC family transcriptional regulator 0.9615 9 109 GO:0003700
GO:0043565
AF-A0A4D7JA62-F1-model_v4 deleted 0.9544 4 110
AF-A0A1G0ZQ40-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9357 2 109 GO:0003700
GO:0043565
AF-A0A133KT66-F1-model_v4 Transcriptional regulator, AraC family 0.9357 9 110 GO:0003700
GO:0043565

Map