F345515

General Info

Members Datasets Scaffolds Average Seq Length
232 175 464 314

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0180431|Ga0501070_0180431_497_1561
Length 354
Sequence VSPSDLPTTDPSYTAEISRVAALGGGLIGRSWTALFLAAGKSVSVYDPDPAAEARVRDGVEAAWPVLTSLGLANGSAPAAELTFCHDAREAVDGAQFVQESVPERVDLKHALYADIEPILDENAVVASSASGLTLSELQAGWTRPGRLVLGHPFNPPHLIPLVEVMGNHRTDAGVVDSARRFYESIGKVTIEVRREVPGHVANRLQAAMWREAIHLVEEGVATVHDVDVAVSSGPGLRWAVMGPTQLFHLGGDDGGIAAFCQRYADSFHRWWDDLGQPRLDGPTVDHLVEGMAQCVGSETPDDLAAKRDALLTAVVAATHPRQSRTPRSAATTPERPYLTPQSQDGQGPVAPLV

Samples

Sample ID Description Type Environment
1 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
37 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
41 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
66 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
67 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
68 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
69 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
70 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
75 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
76 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
81 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
82 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
83 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
84 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
88 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
89 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
90 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
91 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
92 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
93 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
97 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
100 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
101 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
112 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
115 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
146 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
151 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
152 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
153 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
154 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
155 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
156 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
157 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
158 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
159 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
160 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
161 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
162 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
163 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
164 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
165 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
166 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
167 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
168 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
169 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
170 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
171 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
172 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
173 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
174 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
175 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.36
Metatranscriptomes 0.86
Isolates 10.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.6
Nodule 0.86
Rhizoplane 3.88
Rhizosphere 76.72
Stem 0
Stem Tuber 0
Unclassified 2.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501070_0180431 3300049586 Bacteria 1738
2 rootL2_10105556 3300003322 Bacteria 1195
3 rootH1_10103496 3300003323 Unclassified 1310
4 Ga0055538_1000059 3300003751 Bacteria 112508
5 Ga0055539_1000089 3300003752 Bacteria 112508
6 Ga0055533_1000098 3300003756 Bacteria 112508
7 Ga0055525_1000130 3300003759 Bacteria 112508
8 Ga0055541_1000061 3300003841 Bacteria 112508
9 Ga0070683_100013883 3300005329 Bacteria 7035
10 Ga0070680_100049704 3300005336 Bacteria 3419
11 Ga0070660_100091084 3300005339 Bacteria 2405
12 Ga0070660_100232798 3300005339 Bacteria 1499
13 Ga0070659_100261096 3300005366 Bacteria 1437
14 Ga0070709_10210509 3300005434 Bacteria 1382
15 Ga0070714_100504911 3300005435 Unclassified 1154
16 Ga0070705_100076609 3300005440 Bacteria 2040
17 Ga0070679_100003198 3300005530 Bacteria 14961
18 Ga0070696_100024364 3300005546 Bacteria 4113
19 Ga0068855_100000366 3300005563 Bacteria 55965
20 Ga0068855_100012905 3300005563 Bacteria 10083
21 Ga0068854_100002985 3300005578 Bacteria 10491
22 Ga0068851_10015406 3300005834 Bacteria 3642
23 Ga0070715_10092120 3300006163 Unclassified 1397
24 Ga0070712_100342695 3300006175 Bacteria 1221
25 Ga0075428_100128337 3300006844 Bacteria 2759
26 Ga0075430_100020141 3300006846 Bacteria 5676
27 Ga0075431_100022478 3300006847 Bacteria 6447
28 Ga0075429_100044709 3300006880 Bacteria 3852
29 Ga0075429_100111853 3300006880 Bacteria 2387
30 Ga0105240_10158187 3300009093 Bacteria 2693
31 Ga0114129_10031292 3300009147 Bacteria 7525
32 Ga0105242_10131875 3300009176 Bacteria 2158
33 Ga0105237_10003526 3300009545 Bacteria 18545
34 Ga0105237_10040427 3300009545 Bacteria 4702
35 Ga0105237_10197049 3300009545 Bacteria 2014
36 Ga0105238_10000031 3300009551 Bacteria 179497
37 Ga0105239_10002893 3300010375 Bacteria 21450
38 Ga0157373_10000184 3300013100 Bacteria 51738
39 Ga0163162_10063866 3300013306 Bacteria 3726
40 Ga0157375_10184570 3300013308 Bacteria 2239
41 Ga0182006_1004509 3300015261 Bacteria 6856
42 Ga0206353_10225528 3300020082 Bacteria 2385
43 Ga0206353_11342136 3300020082 Bacteria 3408
44 Ga0213872_10012867 3300021361 Bacteria 3925
45 Ga0213875_10009622 3300021388 Bacteria 4886
46 Ga0213875_10062713 3300021388 Bacteria 1738
47 Ga0213871_10004122 3300021441 Bacteria 2878
48 Ga0209784_100018 3300025224 Bacteria 456816
49 Ga0209566_100016 3300025225 Bacteria 456824
50 Ga0209674_100030 3300025226 Bacteria 456824
51 Ga0209563_100034 3300025230 Bacteria 456824
52 Ga0209677_100019 3300025253 Bacteria 456824
53 Ga0207695_10007430 3300025913 Bacteria 13951
54 Ga0207671_10037602 3300025914 Bacteria 3588
55 Ga0207660_10236575 3300025917 Bacteria 1438
56 Ga0207652_10050774 3300025921 Bacteria 3554
57 Ga0207694_10001339 3300025924 Bacteria 21222
58 Ga0207664_10474448 3300025929 Unclassified 1119
59 Ga0207661_10017565 3300025944 Bacteria 5297
60 Ga0207667_10000044 3300025949 Bacteria 248251
61 Ga0207667_10014102 3300025949 Bacteria 9123
62 Ga0207640_10007802 3300025981 Bacteria 5912
63 Ga0207674_10193553 3300026116 Bacteria 1983
64 Ga0207428_10035528 3300027907 Bacteria 4073
65 Ga0307410_10029377 3300031852 Bacteria 3501
66 Ga0307412_10123448 3300031911 Bacteria 1868
67 Ga0373927_0292127 3300035695 Bacteria 1073
68 Ga0395900_0295362 3300037418 Bacteria 1608
69 Ga0395905_0002394 3300037471 Bacteria 20870
70 Ga0395905_0002868 3300037471 Bacteria 18825
71 Ga0395905_0067301 3300037471 Bacteria 3355
72 Ga0395905_0105527 3300037471 Bacteria 2646
73 Ga0436364_0051037 3300037853 Bacteria 1706
74 Ga0436364_0115113 3300037853 Bacteria 1597
75 Ga0436364_1334300 3300037853 Bacteria 3526
76 Ga0400483_068126 3300039062 Bacteria 5093
77 Ga0436365_1717956 3300039437 Bacteria 4685
78 Ga0436360_0822678 3300039438 Bacteria 4763
79 Ga0436361_0550198 3300039447 Bacteria 9793
80 Ga0436363_1028914 3300039450 Unclassified 1583
81 Ga0436362_0984714 3300039453 Bacteria 1716
82 Ga0439451_010499 3300042009 Bacteria 1866
83 Ga0466977_0000023 3300044666 Bacteria 23828
84 Ga0466966_0009938 3300044684 Bacteria 6310
85 Ga0466961_0019902 3300044693 Bacteria 4320
86 Ga0466961_0127503 3300044693 Bacteria 1596
87 Ga0466963_0016870 3300044694 Bacteria 4547
88 Ga0466963_0109207 3300044694 Bacteria 1898
89 Ga0466971_0045371 3300044719 Bacteria 1974
90 Ga0466968_0154670 3300044735 Bacteria 1056
91 Ga0466970_0140488 3300044765 Bacteria 1330
92 Ga0466959_0060996 3300045049 Bacteria 2743
93 Ga0495603_0054350 3300046455 Bacteria 2374
94 Ga0495653_0002966 3300046463 Bacteria 13592
95 Ga0495605_0026610 3300046474 Bacteria 3006
96 Ga0495664_0041762 3300046477 Bacteria 2714
97 Ga0495583_0000671 3300046506 Bacteria 44728
98 Ga0495583_0002280 3300046506 Bacteria 16795
99 Ga0495606_0008333 3300046507 Bacteria 9032
100 Ga0495606_0105368 3300046507 Bacteria 1709
101 Ga0495616_0000238 3300046513 Bacteria 44742
102 Ga0495628_0012988 3300046516 Bacteria 7015
103 Ga0495630_0013270 3300046517 Bacteria 5994
104 Ga0495637_0033602 3300046520 Bacteria 2251
105 Ga0495643_0000121 3300046522 Bacteria 125932
106 Ga0495643_0009700 3300046522 Bacteria 5957
107 Ga0495644_0019469 3300046523 Bacteria 2592
108 Ga0495642_0053346 3300046528 Bacteria 1666
109 Ga0495652_0012899 3300046529 Bacteria 7531
110 Ga0495665_0000074 3300046531 Bacteria 42760
111 Ga0495597_0004720 3300046542 Bacteria 7386
112 Ga0495645_0018992 3300046543 Bacteria 4946
113 Ga0495635_0089852 3300046663 Bacteria 2102
114 Ga0495661_0003466 3300046665 Bacteria 11644
115 Ga0495661_0037072 3300046665 Bacteria 3046
116 Ga0495661_0049789 3300046665 Bacteria 2539
117 Ga0495623_0009862 3300046679 Bacteria 6188
118 Ga0495646_0015450 3300046680 Bacteria 4845
119 Ga0495624_0002342 3300046690 Bacteria 14377
120 Ga0495670_0018487 3300046691 Bacteria 3431
121 Ga0495604_0013543 3300047317 Bacteria 6503
122 Ga0495680_0000747 3300047322 Bacteria 36401
123 Ga0495593_0003659 3300047673 Bacteria 9183
124 Ga0495602_0028611 3300048088 Bacteria 5328
125 Ga0495626_0001550 3300048091 Bacteria 18037
126 Ga0495626_0027093 3300048091 Bacteria 2788
127 Ga0495626_0097416 3300048091 Bacteria 1286
128 Ga0496102_0116012 3300048905 Bacteria 2499
129 Ga0496104_0059776 3300048907 Bacteria 3609
130 Ga0496104_0134385 3300048907 Bacteria 2376
131 Ga0496104_0150386 3300048907 Bacteria 2235
132 Ga0496105_0067899 3300048908 Bacteria 2944
133 Ga0496106_0051454 3300048909 Bacteria 3106
134 Ga0496110_0236275 3300048913 Bacteria 1663
135 Ga0496110_0594299 3300048913 Bacteria 1004
136 Ga0496115_0251187 3300048918 Unclassified 1456
137 Ga0496116_0112071 3300048919 Bacteria 1600
138 Ga0496121_0013989 3300048924 Bacteria 8570
139 Ga0496121_0053264 3300048924 Bacteria 3391
140 Ga0496126_0091988 3300048929 Bacteria 2666
141 Ga0496126_0129104 3300048929 Bacteria 2186
142 Ga0496126_0161266 3300048929 Bacteria 1916
143 Ga0501031_0004711 3300049568 Bacteria 8846
144 Ga0501031_0077963 3300049568 Bacteria 2158
145 Ga0501031_0082814 3300049568 Bacteria 2091
146 Ga0501032_0023626 3300049569 Bacteria 4244
147 Ga0501034_0000353 3300049571 Bacteria 79342
148 Ga0501034_0041192 3300049571 Bacteria 4673
149 Ga0501036_0007679 3300049572 Bacteria 8807
150 Ga0501036_0049266 3300049572 Bacteria 3567
151 Ga0501037_0016330 3300049573 Bacteria 5463
152 Ga0501037_0032835 3300049573 Bacteria 3835
153 Ga0501038_0037375 3300049574 Bacteria 4257
154 Ga0501038_0257522 3300049574 Bacteria 1380
155 Ga0501039_0010251 3300049575 Bacteria 7143
156 Ga0501039_0161919 3300049575 Bacteria 1759
157 Ga0501040_0023989 3300049576 Bacteria 4092
158 Ga0501040_0029954 3300049576 Bacteria 3673
159 Ga0501041_0011557 3300049577 Bacteria 5221
160 Ga0501042_0002931 3300049578 Bacteria 10592
161 Ga0501042_0065135 3300049578 Bacteria 2604
162 Ga0501042_0238047 3300049578 Bacteria 1313
163 Ga0501043_0022561 3300049579 Bacteria 4936
164 Ga0501048_0015902 3300049582 Bacteria 5551
165 Ga0501048_0102554 3300049582 Bacteria 2019
166 Ga0501067_0025464 3300049583 Bacteria 3279
167 Ga0501068_0084725 3300049584 Bacteria 1950
168 Ga0501069_0025347 3300049585 Bacteria 3240
169 Ga0501069_0060246 3300049585 Bacteria 2119
170 Ga0501069_0069428 3300049585 Bacteria 1973
171 Ga0501070_0020170 3300049586 Bacteria 5592
172 Ga0501070_0020414 3300049586 Bacteria 5557
173 Ga0501070_0047752 3300049586 Bacteria 3557
174 Ga0501070_0146813 3300049586 Bacteria 1947
175 Ga0501071_0036549 3300049587 Bacteria 3503
176 Ga0501072_0027260 3300049588 Bacteria 4457
177 Ga0501072_0037213 3300049588 Bacteria 3816
178 Ga0501074_0010770 3300049590 Bacteria 6641
179 Ga0501074_0030020 3300049590 Bacteria 3940
180 Ga0501074_0238891 3300049590 Bacteria 1292
181 Ga0501075_0014497 3300049591 Bacteria 5649
182 Ga0501075_0048048 3300049591 Bacteria 3207
183 Ga0501076_0093534 3300049592 Bacteria 2419
184 Ga0501077_0009007 3300049593 Bacteria 6196
185 Ga0501077_0011926 3300049593 Bacteria 5437
186 Ga0501079_0005298 3300049741 Bacteria 9594
187 Ga0501079_0011604 3300049741 Bacteria 6728
188 Ga0501080_0075663 3300049742 Bacteria 3131
189 Ga0501080_0215579 3300049742 Bacteria 1758
190 Ga0501081_0007578 3300049743 Bacteria 7036
191 Ga0501035_0127888 3300049822 Bacteria 2217
192 Ga0501045_0014013 3300049824 Bacteria 5675
193 Ga0501045_0087193 3300049824 Bacteria 2304
194 Ga0501045_0422240 3300049824 Bacteria 992
195 nmdc:mga05p37_34534_c1 3300050507 Bacteria 6194
196 nmdc:mga09592_675_c1 3300050508 Bacteria 26098
197 nmdc:mga0qj67_8255_c1 3300050509 Bacteria 7720
198 nmdc:mga06r32_135621_c1 3300050510 Bacteria 2436
199 Ga0500618_000077 3300053125 Bacteria 80520
200 Ga0500618_003941 3300053125 Bacteria 4920
201 Ga0500659_0003480 3300053135 Bacteria 9199
202 Ga0501084_0056854 3300054114 Bacteria 3273
203 Ga0501082_0011291 3300060353 Bacteria 7678
204 Ga0501082_0018661 3300060353 Bacteria 5977
205 Ga0501082_0069716 3300060353 Bacteria 3028
206 Ga0466962_0063776 3300061719 Bacteria 1759
207 Ga0530510_0017141 3300061734 Bacteria 5130
208 2511387967 2511231026 Bacteria 5225445
209 2521560450 2521172590 Bacteria 5047645
210 2553005480 2551306416 Bacteria 6152985
211 2644031674 2643221603 Bacteria 6147767
212 2728754081 2728368998 Bacteria 8720350
213 2765571675 2765235838 Bacteria 5445269
214 2808982257 2808606386 Bacteria 4471946
215 2809129943 2808606415 Bacteria 4576710
216 2809149002 2808606419 Bacteria 4576925
217 2819617121 2818991449 Bacteria 5518009
218 2839098635 2839094727 Bacteria 5534556
219 2852619141 2852618963 Bacteria 4577824
220 2854920442 2854916844 Bacteria 5725939
221 2899806307 2899803654 Bacteria 5577784
222 2904442749 2904439833 Bacteria 5931679
223 2904535038 2904530477 Bacteria 5876334
224 2904588624 2904584206 Bacteria 6028872
225 2904594302 2904589729 Bacteria 6113573
226 2904604856 2904601388 Bacteria 5884906
227 2919048721 2919046199 Bacteria 5567169
228 2919083094 2919079590 Bacteria 5946433
229 2923514140 2923510766 Bacteria 5926163
230 2928132952 2928130867 Bacteria 5467269
231 3007401354 3007395558 Bacteria 6755444
232 8045867089 8045864390 Bacteria 5043873
233 Ga0501070_0180431
234 rootL2_10105556
235 rootH1_10103496
236 Ga0055538_1000059
237 Ga0055539_1000089
238 Ga0055533_1000098
239 Ga0055525_1000130
240 Ga0055541_1000061
241 Ga0070683_100013883
242 Ga0070680_100049704
243 Ga0070660_100091084
244 Ga0070660_100232798
245 Ga0070659_100261096
246 Ga0070709_10210509
247 Ga0070714_100504911
248 Ga0070705_100076609
249 Ga0070679_100003198
250 Ga0070696_100024364
251 Ga0068855_100000366
252 Ga0068855_100012905
253 Ga0068854_100002985
254 Ga0068851_10015406
255 Ga0070715_10092120
256 Ga0070712_100342695
257 Ga0075428_100128337
258 Ga0075430_100020141
259 Ga0075431_100022478
260 Ga0075429_100044709
261 Ga0075429_100111853
262 Ga0105240_10158187
263 Ga0114129_10031292
264 Ga0105242_10131875
265 Ga0105237_10003526
266 Ga0105237_10040427
267 Ga0105237_10197049
268 Ga0105238_10000031
269 Ga0105239_10002893
270 Ga0157373_10000184
271 Ga0163162_10063866
272 Ga0157375_10184570
273 Ga0182006_1004509
274 Ga0206353_10225528
275 Ga0206353_11342136
276 Ga0213872_10012867
277 Ga0213875_10009622
278 Ga0213875_10062713
279 Ga0213871_10004122
280 Ga0209784_100018
281 Ga0209566_100016
282 Ga0209674_100030
283 Ga0209563_100034
284 Ga0209677_100019
285 Ga0207695_10007430
286 Ga0207671_10037602
287 Ga0207660_10236575
288 Ga0207652_10050774
289 Ga0207694_10001339
290 Ga0207664_10474448
291 Ga0207661_10017565
292 Ga0207667_10000044
293 Ga0207667_10014102
294 Ga0207640_10007802
295 Ga0207674_10193553
296 Ga0207428_10035528
297 Ga0307410_10029377
298 Ga0307412_10123448
299 Ga0373927_0292127
300 Ga0395900_0295362
301 Ga0395905_0002394
302 Ga0395905_0002868
303 Ga0395905_0067301
304 Ga0395905_0105527
305 Ga0436364_0051037
306 Ga0436364_0115113
307 Ga0436364_1334300
308 Ga0400483_068126
309 Ga0436365_1717956
310 Ga0436360_0822678
311 Ga0436361_0550198
312 Ga0436363_1028914
313 Ga0436362_0984714
314 Ga0439451_010499
315 Ga0466977_0000023
316 Ga0466966_0009938
317 Ga0466961_0019902
318 Ga0466961_0127503
319 Ga0466963_0016870
320 Ga0466963_0109207
321 Ga0466971_0045371
322 Ga0466968_0154670
323 Ga0466970_0140488
324 Ga0466959_0060996
325 Ga0495603_0054350
326 Ga0495653_0002966
327 Ga0495605_0026610
328 Ga0495664_0041762
329 Ga0495583_0000671
330 Ga0495583_0002280
331 Ga0495606_0008333
332 Ga0495606_0105368
333 Ga0495616_0000238
334 Ga0495628_0012988
335 Ga0495630_0013270
336 Ga0495637_0033602
337 Ga0495643_0000121
338 Ga0495643_0009700
339 Ga0495644_0019469
340 Ga0495642_0053346
341 Ga0495652_0012899
342 Ga0495665_0000074
343 Ga0495597_0004720
344 Ga0495645_0018992
345 Ga0495635_0089852
346 Ga0495661_0003466
347 Ga0495661_0037072
348 Ga0495661_0049789
349 Ga0495623_0009862
350 Ga0495646_0015450
351 Ga0495624_0002342
352 Ga0495670_0018487
353 Ga0495604_0013543
354 Ga0495680_0000747
355 Ga0495593_0003659
356 Ga0495602_0028611
357 Ga0495626_0001550
358 Ga0495626_0027093
359 Ga0495626_0097416
360 Ga0496102_0116012
361 Ga0496104_0059776
362 Ga0496104_0134385
363 Ga0496104_0150386
364 Ga0496105_0067899
365 Ga0496106_0051454
366 Ga0496110_0236275
367 Ga0496110_0594299
368 Ga0496115_0251187
369 Ga0496116_0112071
370 Ga0496121_0013989
371 Ga0496121_0053264
372 Ga0496126_0091988
373 Ga0496126_0129104
374 Ga0496126_0161266
375 Ga0501031_0004711
376 Ga0501031_0077963
377 Ga0501031_0082814
378 Ga0501032_0023626
379 Ga0501034_0000353
380 Ga0501034_0041192
381 Ga0501036_0007679
382 Ga0501036_0049266
383 Ga0501037_0016330
384 Ga0501037_0032835
385 Ga0501038_0037375
386 Ga0501038_0257522
387 Ga0501039_0010251
388 Ga0501039_0161919
389 Ga0501040_0023989
390 Ga0501040_0029954
391 Ga0501041_0011557
392 Ga0501042_0002931
393 Ga0501042_0065135
394 Ga0501042_0238047
395 Ga0501043_0022561
396 Ga0501048_0015902
397 Ga0501048_0102554
398 Ga0501067_0025464
399 Ga0501068_0084725
400 Ga0501069_0025347
401 Ga0501069_0060246
402 Ga0501069_0069428
403 Ga0501070_0020170
404 Ga0501070_0020414
405 Ga0501070_0047752
406 Ga0501070_0146813
407 Ga0501071_0036549
408 Ga0501072_0027260
409 Ga0501072_0037213
410 Ga0501074_0010770
411 Ga0501074_0030020
412 Ga0501074_0238891
413 Ga0501075_0014497
414 Ga0501075_0048048
415 Ga0501076_0093534
416 Ga0501077_0009007
417 Ga0501077_0011926
418 Ga0501079_0005298
419 Ga0501079_0011604
420 Ga0501080_0075663
421 Ga0501080_0215579
422 Ga0501081_0007578
423 Ga0501035_0127888
424 Ga0501045_0014013
425 Ga0501045_0087193
426 Ga0501045_0422240
427 nmdc:mga05p37_34534_c1
428 nmdc:mga09592_675_c1
429 nmdc:mga0qj67_8255_c1
430 nmdc:mga06r32_135621_c1
431 Ga0500618_000077
432 Ga0500618_003941
433 Ga0500659_0003480
434 Ga0501084_0056854
435 Ga0501082_0011291
436 Ga0501082_0018661
437 Ga0501082_0069716
438 Ga0466962_0063776
439 Ga0530510_0017141
440 2511387967
441 2521560450
442 2553005480
443 2644031674
444 2728754081
445 2765571675
446 2808982257
447 2809129943
448 2809149002
449 2819617121
450 2839098635
451 2852619141
452 2854920442
453 2899806307
454 2904442749
455 2904535038
456 2904588624
457 2904594302
458 2904604856
459 2919048721
460 2919083094
461 2923514140
462 2928132952
463 3007401354
464 8045867089

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

19

197

0.97

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

199

281

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
7exs-assembly1.cif.gz_A thermomicrobium roseum sarcosine oxidase mutant - s320r 0.9982 7 37
7kpt-assembly1.cif.gz_A crystal structure of ctde in complex with fad and substrate 4 0.991 7 39
5nmw-assembly2.cif.gz_D crystal structure of the pyrrolizidine alkaloid n-oxygenase from zonocerus variegatus in complex with fad 0.9895 6 37
5bul-assembly1.cif.gz_A structure of flavin-dependent brominase bmp2 triple mutant y302s f306v a345w 0.9888 9 38
5nmw-assembly1.cif.gz_A-2 crystal structure of the pyrrolizidine alkaloid n-oxygenase from zonocerus variegatus in complex with fad 0.984 6 39
ID Description Score Start End Superfamily
af_P9WNY9_4_366_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9918 9 37 3.50.50.60
af_Q5VQP1_29_415_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9834 9 39 3.50.50.60
af_Q8VYV2_23_370_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.98 10 37 3.50.50.60
af_Q8H191_31_475_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9771 10 39 3.50.50.60
af_B0G160_35_582_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9749 9 37 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A0E4BQU7-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9827 68 174 GO:0006631
GO:0016491
GO:0070403
AF-A0A5C8SS31-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9773 10 248 GO:0006631
GO:0009056
GO:0016616
GO:0070403
AF-A0A529HNL7-F1-model_v4 L-carnitine dehydrogenase 0.9722 88 255 GO:0006631
GO:0009056
GO:0016616
GO:0070403
AF-A0A5B7DM71-F1-model_v4 Lambda-crystallin 0.9626 71 236 GO:0006631
GO:0050104
GO:0070403
AF-A0A7S2HKU4-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9622 89 193 GO:0006635
GO:0016829
GO:0016853
GO:0070403

Map