F345461

General Info

Members Datasets Scaffolds Average Seq Length
232 176 464 296

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0001065|Ga0496115_0001065_6377_7345
Length 322
Sequence MKVNWRGVLPAITTKFNQDGSVDHGFFAEHCRWMIEAGCVGLVPLGSLGEGATLTFEEKTAVLKTAIAAVGDRAPIVPGIAALSTGDAVRLAQMAESVGCSGVMVLPPYAYSTDWREMKAHVDAVIRSVNLPVMLYNNPPAYRTDFLPEQIAELARDHANLAAVKESSTDVRRVRAIRALIGDRLEILIGVDDGIVEAVQAGAVGWIAGLVNAFPRESVDLYDLAMQARDGKGDRTALEELYAWFLPLLRLDTVPKFVQLIKLAQEMVGMGSAQVRGPRLELVGAELEEARAVIQYALTHRPAVAVASDYDPASKGAAALVK

Samples

Sample ID Description Type Environment
1 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
63 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
64 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
101 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
114 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
124 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
125 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
126 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
129 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
135 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
136 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
137 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
138 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
139 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
143 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
144 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
145 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
146 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
147 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
162 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
163 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
166 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
167 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
168 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
169 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
170 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
171 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
172 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
173 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
174 2895395659 Rhodanobacter sp. T12-5 Isolate Unclassified
175 2919085039 Luteibacter sp. 1214 Isolate Unclassified
176 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.69
Metatranscriptomes 0.86
Isolates 3.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.88
Nodule 0
Rhizoplane 0.86
Rhizosphere 87.93
Stem 0
Stem Tuber 0
Unclassified 6.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496115_0001065 3300048918 Bacteria 19849
2 JGI24740J21852_10004480 3300001979 Bacteria 6011
3 JGI25156J39149_1008523 3300002705 Bacteria 2570
4 JGI25157J39369_1001682 3300002741 Bacteria 7503
5 JGI25151J46595_10000261 3300003187 Bacteria 61830
6 rootL2_10162675 3300003322 Bacteria 2158
7 Ga0070658_10007102 3300005327 Bacteria 9042
8 Ga0070658_10197079 3300005327 Bacteria 1698
9 Ga0070676_10041950 3300005328 Bacteria 2655
10 Ga0068869_100167612 3300005334 Bacteria 1714
11 Ga0070680_100033819 3300005336 Bacteria 4122
12 Ga0070680_100184426 3300005336 Bacteria 1758
13 Ga0068868_100072051 3300005338 Bacteria 2756
14 Ga0070660_100123479 3300005339 Bacteria 2067
15 Ga0070691_10002270 3300005341 Bacteria 8501
16 Ga0070661_100123704 3300005344 Bacteria 1939
17 Ga0070668_100006546 3300005347 Bacteria 8632
18 Ga0070669_100007878 3300005353 Bacteria 7616
19 Ga0070714_100001986 3300005435 Bacteria 14951
20 Ga0070714_100007862 3300005435 Bacteria 8306
21 Ga0070714_100038786 3300005435 Unclassified 4007
22 Ga0070714_100184269 3300005435 Bacteria 1901
23 Ga0070713_100098915 3300005436 Bacteria 2523
24 Ga0070713_100130800 3300005436 Bacteria 2213
25 Ga0070705_100011522 3300005440 Bacteria 4463
26 Ga0070705_100407445 3300005440 Bacteria 1009
27 Ga0070700_100154904 3300005441 Bacteria 1571
28 Ga0070694_100028529 3300005444 Bacteria 3633
29 Ga0070662_100014417 3300005457 Bacteria 5282
30 Ga0070681_10010390 3300005458 Bacteria 9195
31 Ga0070681_10053324 3300005458 Bacteria 4030
32 Ga0070707_100350905 3300005468 Bacteria 1433
33 Ga0070698_100008265 3300005471 Bacteria 11251
34 Ga0070679_100008443 3300005530 Bacteria 9695
35 Ga0068853_100027703 3300005539 Bacteria 4762
36 Ga0068853_100049625 3300005539 Bacteria 3607
37 Ga0070695_100056871 3300005545 Bacteria 2526
38 Ga0070696_100059038 3300005546 Bacteria 2680
39 Ga0070665_100379348 3300005548 Bacteria 1421
40 Ga0070704_100002406 3300005549 Bacteria 10505
41 Ga0070704_100002889 3300005549 Bacteria 9751
42 Ga0068857_100038625 3300005577 Bacteria 4228
43 Ga0068854_100000008 3300005578 Bacteria 181750
44 Ga0068856_100103231 3300005614 Bacteria 2845
45 Ga0070702_100040811 3300005615 Bacteria 2599
46 Ga0068852_100013911 3300005616 Bacteria 6171
47 Ga0068852_100065129 3300005616 Bacteria 3179
48 Ga0068861_100005528 3300005719 Bacteria 8560
49 Ga0068851_10065412 3300005834 Bacteria 1871
50 Ga0068863_100162450 3300005841 Bacteria 2140
51 Ga0068862_100000661 3300005844 Bacteria 35359
52 Ga0070717_10009093 3300006028 Bacteria 7459
53 Ga0070716_100297282 3300006173 Bacteria 1121
54 Ga0075428_100000950 3300006844 Bacteria 30691
55 Ga0075428_100001208 3300006844 Bacteria 27605
56 Ga0075428_100020733 3300006844 Bacteria 7276
57 Ga0075428_100077117 3300006844 Bacteria 3638
58 Ga0075430_100124692 3300006846 Bacteria 2147
59 Ga0075430_100166053 3300006846 Unclassified 1837
60 Ga0075431_100066077 3300006847 Bacteria 3734
61 Ga0075431_100328463 3300006847 Bacteria 1541
62 Ga0075429_100000151 3300006880 Bacteria 43094
63 Ga0075429_100006531 3300006880 Bacteria 10091
64 Ga0105240_10066337 3300009093 Bacteria 4478
65 Ga0105240_10160993 3300009093 Unclassified 2665
66 Ga0111539_10002003 3300009094 Bacteria 27192
67 Ga0111539_10026248 3300009094 Bacteria 7126
68 Ga0105245_10008911 3300009098 Bacteria 8757
69 Ga0114129_10011245 3300009147 Bacteria 12762
70 Ga0105241_10018825 3300009174 Bacteria 5087
71 Ga0105237_10035305 3300009545 Bacteria 5059
72 Ga0105238_10011123 3300009551 Bacteria 9049
73 Ga0105238_10159451 3300009551 Bacteria 2231
74 Ga0105238_10167794 3300009551 Bacteria 2171
75 Ga0105249_10067137 3300009553 Bacteria 3304
76 Ga0157370_10000291 3300013104 Bacteria 63434
77 Ga0157370_10000378 3300013104 Bacteria 56042
78 Ga0157369_10055333 3300013105 Bacteria 4283
79 Ga0157369_10134514 3300013105 Unclassified 2618
80 Ga0157369_10196746 3300013105 Bacteria 2116
81 Ga0157369_10258670 3300013105 Unclassified 1816
82 Ga0157374_10381594 3300013296 Bacteria 1404
83 Ga0157378_10025978 3300013297 Bacteria 5160
84 Ga0157378_10084879 3300013297 Bacteria 2868
85 Ga0163162_10412115 3300013306 Bacteria 1484
86 Ga0157372_10010849 3300013307 Bacteria 9699
87 Ga0157372_10010935 3300013307 Bacteria 9659
88 Ga0157372_10029422 3300013307 Bacteria 5998
89 Ga0157372_10215670 3300013307 Bacteria 2224
90 Ga0157372_10271466 3300013307 Bacteria 1971
91 Ga0182008_10044408 3300014497 Bacteria 2210
92 Ga0182007_10013618 3300015262 Bacteria 3094
93 Ga0182005_1000004 3300015265 Bacteria 609645
94 Ga0206356_11151130 3300020070 Bacteria 5548
95 Ga0213872_10000118 3300021361 Bacteria 73787
96 Ga0224712_10011687 3300022467 Bacteria 2733
97 Ga0209674_101702 3300025226 Bacteria 5426
98 Ga0209026_1000098 3300025250 Bacteria 161845
99 Ga0207645_10116641 3300025907 Bacteria 1731
100 Ga0207643_10014826 3300025908 Bacteria 4238
101 Ga0207707_10001877 3300025912 Bacteria 19202
102 Ga0207707_10078364 3300025912 Bacteria 2886
103 Ga0207695_10025602 3300025913 Bacteria 6600
104 Ga0207695_10040765 3300025913 Bacteria 4974
105 Ga0207695_10088809 3300025913 Bacteria 3110
106 Ga0207671_10114121 3300025914 Unclassified 2059
107 Ga0207693_10169973 3300025915 Bacteria 1717
108 Ga0207663_10106505 3300025916 Bacteria 1895
109 Ga0207660_10184329 3300025917 Bacteria 1623
110 Ga0207660_10261677 3300025917 Bacteria 1368
111 Ga0207657_10047658 3300025919 Bacteria 3745
112 Ga0207649_10097936 3300025920 Bacteria 1935
113 Ga0207649_10425659 3300025920 Bacteria 998
114 Ga0207652_10026115 3300025921 Bacteria 4861
115 Ga0207694_10006091 3300025924 Bacteria 9221
116 Ga0207694_10065462 3300025924 Bacteria 2833
117 Ga0207687_10016208 3300025927 Bacteria 4893
118 Ga0207700_10070177 3300025928 Bacteria 2692
119 Ga0207700_10088222 3300025928 Bacteria 2441
120 Ga0207664_10001514 3300025929 Bacteria 15227
121 Ga0207664_10178573 3300025929 Unclassified 1822
122 Ga0207664_10419088 3300025929 Bacteria 1192
123 Ga0207690_10001448 3300025932 Bacteria 14851
124 Ga0207690_10256193 3300025932 Bacteria 1354
125 Ga0207706_10036249 3300025933 Bacteria 4382
126 Ga0207689_10148768 3300025942 Bacteria 1930
127 Ga0207661_10185359 3300025944 Bacteria 1821
128 Ga0207712_10019711 3300025961 Bacteria 4407
129 Ga0207668_10011216 3300025972 Bacteria 5440
130 Ga0207640_10000008 3300025981 Bacteria 290578
131 Ga0207677_10075530 3300026023 Unclassified 2395
132 Ga0207639_10012794 3300026041 Bacteria 5855
133 Ga0207639_10022990 3300026041 Bacteria 4496
134 Ga0207674_10412102 3300026116 Bacteria 1306
135 Ga0207674_10453165 3300026116 Bacteria 1240
136 Ga0207675_100009693 3300026118 Bacteria 9011
137 Ga0207698_10007823 3300026142 Bacteria 6721
138 Ga0207698_10092224 3300026142 Bacteria 2482
139 Ga0209974_10019132 3300027876 Bacteria 2270
140 Ga0207428_10011314 3300027907 Bacteria 7895
141 Ga0268265_10000596 3300028380 Bacteria 36362
142 Ga0307515_10010206 3300028794 Bacteria 18037
143 Ga0265338_10079595 3300028800 Unclassified 2757
144 Ga0265320_10035776 3300031240 Bacteria 2515
145 Ga0265327_10000750 3300031251 Bacteria 50498
146 Ga0265327_10101405 3300031251 Bacteria 1388
147 Ga0307513_10020096 3300031456 Bacteria 7928
148 Ga0307513_10081664 3300031456 Bacteria 3330
149 Ga0307408_100027368 3300031548 Bacteria 3928
150 Ga0307408_100341115 3300031548 Unclassified 1268
151 Ga0307408_100562240 3300031548 Bacteria 1008
152 Ga0265314_10153233 3300031711 Bacteria 1411
153 Ga0307416_100053148 3300032002 Bacteria 3248
154 Ga0307416_100088341 3300032002 Bacteria 2650
155 Ga0307416_100753263 3300032002 Bacteria 1067
156 Ga0373927_0193392 3300035695 Bacteria 1335
157 Ga0373933_0044447 3300035724 Unclassified 2632
158 Ga0373947_0093349 3300035725 Bacteria 1881
159 Ga0373937_0023188 3300036401 Bacteria 5588
160 Ga0373925_0010038 3300037068 Bacteria 6878
161 Ga0395905_0106250 3300037471 Bacteria 2636
162 Ga0436364_0391207 3300037853 Bacteria 1762
163 Ga0439447_003873 3300041407 Bacteria 5249
164 Ga0451577_0000150 3300042876 Bacteria 154181
165 Ga0451577_0401611 3300042876 Unclassified 1244
166 Ga0453684_0224157 3300044712 Bacteria 2175
167 Ga0466957_0011450 3300044842 Bacteria 5119
168 Ga0451576_0089447 3300045051 Bacteria 3202
169 Ga0466967_0220463 3300045976 Bacteria 1802
170 Ga0495617_001883 3300046452 Bacteria 8846
171 Ga0495638_0000034 3300046460 Bacteria 282038
172 Ga0495585_0000001 3300046492 Bacteria 609804
173 Ga0495607_0000010 3300046501 Bacteria 206525
174 Ga0495583_0022159 3300046506 Bacteria 3249
175 Ga0495631_0000190 3300046518 Bacteria 41934
176 Ga0495632_0000003 3300046519 Bacteria 396071
177 Ga0495648_0001020 3300046524 Bacteria 28601
178 Ga0495663_0000460 3300046525 Bacteria 14905
179 Ga0495609_0006354 3300046538 Bacteria 6037
180 Ga0495668_0001750 3300046616 Bacteria 19891
181 Ga0495611_0000001 3300046648 Bacteria 2628469
182 Ga0495625_0000001 3300046660 Bacteria 1641829
183 Ga0495661_0001137 3300046665 Bacteria 23268
184 Ga0495670_0001614 3300046691 Bacteria 11044
185 Ga0495671_0000473 3300046692 Bacteria 31495
186 Ga0495589_0001027 3300046794 Bacteria 16840
187 Ga0495660_0000008 3300046810 Bacteria 435769
188 Ga0495679_000001 3300047446 Bacteria 1607568
189 Ga0495673_0002173 3300047469 Bacteria 14250
190 Ga0495686_0008197 3300047472 Bacteria 7711
191 Ga0496113_0231445 3300048916 Bacteria 1474
192 Ga0496116_0074497 3300048919 Bacteria 2135
193 Ga0496121_0001413 3300048924 Bacteria 40691
194 Ga0496122_0004363 3300048925 Bacteria 17662
195 Ga0496123_0009795 3300048926 Bacteria 8562
196 Ga0495678_000480 3300049459 Bacteria 39751
197 Ga0495682_0001071 3300049460 Bacteria 16092
198 Ga0495682_0020662 3300049460 Bacteria 2470
199 Ga0501032_0253395 3300049569 Bacteria 1142
200 Ga0501034_0033466 3300049571 Bacteria 5214
201 Ga0501037_0006854 3300049573 Bacteria 8323
202 Ga0501038_0164866 3300049574 Bacteria 1798
203 Ga0501040_0211894 3300049576 Bacteria 1378
204 Ga0501046_0306553 3300049580 Bacteria 1159
205 Ga0501047_0062488 3300049581 Unclassified 3592
206 Ga0501047_0196413 3300049581 Bacteria 1879
207 Ga0501080_0156094 3300049742 Bacteria 2108
208 Ga0501035_0003547 3300049822 Bacteria 14901
209 Ga0501044_0004661 3300049823 Bacteria 15344
210 Ga0501044_0018451 3300049823 Bacteria 7475
211 nmdc:mga05p37_6811_c1 3300050507 Bacteria 13470
212 nmdc:mga09592_5_c1 3300050508 Bacteria 130353
213 nmdc:mga09592_8567_c1 3300050508 Bacteria 8318
214 nmdc:mga0qj67_31544_c1 3300050509 Bacteria 4128
215 nmdc:mga0qj67_322959_c1 3300050509 Bacteria 1249
216 nmdc:mga0qj67_40771_c1 3300050509 Unclassified 3649
217 nmdc:mga08y16_1682_c1 3300050511 Bacteria 22429
218 Ga0500635_0000057 3300053080 Bacteria 73077
219 Ga0500643_000002 3300053087 Bacteria 1277657
220 Ga0500583_0106002 3300053092 Bacteria 1381
221 Ga0500555_000420 3300053103 Bacteria 17673
222 Ga0500658_0046194 3300053134 Bacteria 1763
223 Ga0500637_0041991 3300053178 Bacteria 2585
224 Ga0500645_001020 3300053730 Bacteria 15696
225 2526063661 2524614857 Bacteria 4146328
226 2538834192 2537561836 Bacteria 3910579
227 2740064492 2739367875 Bacteria 4157290
228 2842916394 2842914999 Bacteria 4419378
229 2894416185 2894414249 Bacteria 4405451
230 2895398956 2895395659 Bacteria 3983269
231 2919085470 2919085039 Bacteria 4532964
232 2941492040 2941489479 Bacteria 6313767
233 Ga0496115_0001065
234 JGI24740J21852_10004480
235 JGI25156J39149_1008523
236 JGI25157J39369_1001682
237 JGI25151J46595_10000261
238 rootL2_10162675
239 Ga0070658_10007102
240 Ga0070658_10197079
241 Ga0070676_10041950
242 Ga0068869_100167612
243 Ga0070680_100033819
244 Ga0070680_100184426
245 Ga0068868_100072051
246 Ga0070660_100123479
247 Ga0070691_10002270
248 Ga0070661_100123704
249 Ga0070668_100006546
250 Ga0070669_100007878
251 Ga0070714_100001986
252 Ga0070714_100007862
253 Ga0070714_100038786
254 Ga0070714_100184269
255 Ga0070713_100098915
256 Ga0070713_100130800
257 Ga0070705_100011522
258 Ga0070705_100407445
259 Ga0070700_100154904
260 Ga0070694_100028529
261 Ga0070662_100014417
262 Ga0070681_10010390
263 Ga0070681_10053324
264 Ga0070707_100350905
265 Ga0070698_100008265
266 Ga0070679_100008443
267 Ga0068853_100027703
268 Ga0068853_100049625
269 Ga0070695_100056871
270 Ga0070696_100059038
271 Ga0070665_100379348
272 Ga0070704_100002406
273 Ga0070704_100002889
274 Ga0068857_100038625
275 Ga0068854_100000008
276 Ga0068856_100103231
277 Ga0070702_100040811
278 Ga0068852_100013911
279 Ga0068852_100065129
280 Ga0068861_100005528
281 Ga0068851_10065412
282 Ga0068863_100162450
283 Ga0068862_100000661
284 Ga0070717_10009093
285 Ga0070716_100297282
286 Ga0075428_100000950
287 Ga0075428_100001208
288 Ga0075428_100020733
289 Ga0075428_100077117
290 Ga0075430_100124692
291 Ga0075430_100166053
292 Ga0075431_100066077
293 Ga0075431_100328463
294 Ga0075429_100000151
295 Ga0075429_100006531
296 Ga0105240_10066337
297 Ga0105240_10160993
298 Ga0111539_10002003
299 Ga0111539_10026248
300 Ga0105245_10008911
301 Ga0114129_10011245
302 Ga0105241_10018825
303 Ga0105237_10035305
304 Ga0105238_10011123
305 Ga0105238_10159451
306 Ga0105238_10167794
307 Ga0105249_10067137
308 Ga0157370_10000291
309 Ga0157370_10000378
310 Ga0157369_10055333
311 Ga0157369_10134514
312 Ga0157369_10196746
313 Ga0157369_10258670
314 Ga0157374_10381594
315 Ga0157378_10025978
316 Ga0157378_10084879
317 Ga0163162_10412115
318 Ga0157372_10010849
319 Ga0157372_10010935
320 Ga0157372_10029422
321 Ga0157372_10215670
322 Ga0157372_10271466
323 Ga0182008_10044408
324 Ga0182007_10013618
325 Ga0182005_1000004
326 Ga0206356_11151130
327 Ga0213872_10000118
328 Ga0224712_10011687
329 Ga0209674_101702
330 Ga0209026_1000098
331 Ga0207645_10116641
332 Ga0207643_10014826
333 Ga0207707_10001877
334 Ga0207707_10078364
335 Ga0207695_10025602
336 Ga0207695_10040765
337 Ga0207695_10088809
338 Ga0207671_10114121
339 Ga0207693_10169973
340 Ga0207663_10106505
341 Ga0207660_10184329
342 Ga0207660_10261677
343 Ga0207657_10047658
344 Ga0207649_10097936
345 Ga0207649_10425659
346 Ga0207652_10026115
347 Ga0207694_10006091
348 Ga0207694_10065462
349 Ga0207687_10016208
350 Ga0207700_10070177
351 Ga0207700_10088222
352 Ga0207664_10001514
353 Ga0207664_10178573
354 Ga0207664_10419088
355 Ga0207690_10001448
356 Ga0207690_10256193
357 Ga0207706_10036249
358 Ga0207689_10148768
359 Ga0207661_10185359
360 Ga0207712_10019711
361 Ga0207668_10011216
362 Ga0207640_10000008
363 Ga0207677_10075530
364 Ga0207639_10012794
365 Ga0207639_10022990
366 Ga0207674_10412102
367 Ga0207674_10453165
368 Ga0207675_100009693
369 Ga0207698_10007823
370 Ga0207698_10092224
371 Ga0209974_10019132
372 Ga0207428_10011314
373 Ga0268265_10000596
374 Ga0307515_10010206
375 Ga0265338_10079595
376 Ga0265320_10035776
377 Ga0265327_10000750
378 Ga0265327_10101405
379 Ga0307513_10020096
380 Ga0307513_10081664
381 Ga0307408_100027368
382 Ga0307408_100341115
383 Ga0307408_100562240
384 Ga0265314_10153233
385 Ga0307416_100053148
386 Ga0307416_100088341
387 Ga0307416_100753263
388 Ga0373927_0193392
389 Ga0373933_0044447
390 Ga0373947_0093349
391 Ga0373937_0023188
392 Ga0373925_0010038
393 Ga0395905_0106250
394 Ga0436364_0391207
395 Ga0439447_003873
396 Ga0451577_0000150
397 Ga0451577_0401611
398 Ga0453684_0224157
399 Ga0466957_0011450
400 Ga0451576_0089447
401 Ga0466967_0220463
402 Ga0495617_001883
403 Ga0495638_0000034
404 Ga0495585_0000001
405 Ga0495607_0000010
406 Ga0495583_0022159
407 Ga0495631_0000190
408 Ga0495632_0000003
409 Ga0495648_0001020
410 Ga0495663_0000460
411 Ga0495609_0006354
412 Ga0495668_0001750
413 Ga0495611_0000001
414 Ga0495625_0000001
415 Ga0495661_0001137
416 Ga0495670_0001614
417 Ga0495671_0000473
418 Ga0495589_0001027
419 Ga0495660_0000008
420 Ga0495679_000001
421 Ga0495673_0002173
422 Ga0495686_0008197
423 Ga0496113_0231445
424 Ga0496116_0074497
425 Ga0496121_0001413
426 Ga0496122_0004363
427 Ga0496123_0009795
428 Ga0495678_000480
429 Ga0495682_0001071
430 Ga0495682_0020662
431 Ga0501032_0253395
432 Ga0501034_0033466
433 Ga0501037_0006854
434 Ga0501038_0164866
435 Ga0501040_0211894
436 Ga0501046_0306553
437 Ga0501047_0062488
438 Ga0501047_0196413
439 Ga0501080_0156094
440 Ga0501035_0003547
441 Ga0501044_0004661
442 Ga0501044_0018451
443 nmdc:mga05p37_6811_c1
444 nmdc:mga09592_5_c1
445 nmdc:mga09592_8567_c1
446 nmdc:mga0qj67_31544_c1
447 nmdc:mga0qj67_322959_c1
448 nmdc:mga0qj67_40771_c1
449 nmdc:mga08y16_1682_c1
450 Ga0500635_0000057
451 Ga0500643_000002
452 Ga0500583_0106002
453 Ga0500555_000420
454 Ga0500658_0046194
455 Ga0500637_0041991
456 Ga0500645_001020
457 2526063661
458 2538834192
459 2740064492
460 2842916394
461 2894416185
462 2895398956
463 2919085470
464 2941492040

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00701

DHDPS

Dihydrodipicolinate synthetase family

4

297

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4i7u-assembly1.cif.gz_A dihydrodipicolinate synthase of agrobacterium tumefaciens 0.9485 7 298
7lvl-assembly1.cif.gz_A dihydrodipicolinate synthase bound with allosteric inhibitor (s)-lysine from candidatus liberibacter solanacearum 0.9478 7 296
4i7v-assembly1.cif.gz_C agrobacterium tumefaciens dhdps with pyruvate 0.9476 7 298
3flu-assembly1.cif.gz_B crystal structure of dihydrodipicolinate synthase from the pathogen neisseria meningitidis 0.9411 8 296
2ehh-assembly1.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9385 7 293
ID Description Score Start End Superfamily
3a5fA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9361 5 296 3.20.20.70
1xl9D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9332 7 292 3.20.20.70
2yxgD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9295 7 296 3.20.20.70
af_P75682_5_302_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9255 5 295 3.20.20.70
3s5oA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9244 3 294 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7V1PHF2-F1-model_v4 N-acetylneuraminate lyase (EC 4.1.3.3) 0.9778 7 111 GO:0005829
GO:0008747
GO:0008840
GO:0019262
AF-A0A2V9QCR7-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9726 65 296 GO:0008840
AF-A0A3S4GJ13-F1-model_v4 Dihydrodipicolinate synthase (EC 4.2.1.52) 0.9716 128 301 GO:0008840
AF-A0A7Y3CB09-F1-model_v4 Dihydrodipicolinate synthase family protein 0.9708 151 301 GO:0005737
GO:0008840
AF-A0A7L5DNQ8-F1-model_v4 Dihydrodipicolinate synthase family protein 0.97 7 300 GO:0008840

Map