F345207
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 232 | 158 | 464 | 310 |
Family's Representative Sequence
| Representative Sequence | 3300031456|Ga0307513_10140825|Ga0307513_101408252 |
| Length | 341 |
| Sequence | MSAREVGLPDRHPGDGLPRRVTIWEVGARDGLQNESVVVPVEVKAEFLDRLAGAGLGILEATSFVHPRWVPQLADASELLGLLARRHGVRYPVLVPNERGLDRALAAGATEIAVFAAATESFARRNLNRGLDEQFSMFSPVLCRAASEGLGVRGYVSMCFGDPWEGAVAVDQVVAVGRRLLDLGCDQLSLGDTMGVATPGHVVALLDALTGAGVGIDALAVHFHDTYGQALSNTLAALRAGVTCVDASAGGLGGCPYAESATGNLATEDLVWMLDGLGIEHGVDLDALARTSVWMARVLGRPSPSRVVAAVGGSTAPTNPPGTAHNTSWLSPGMPGESQES |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 2 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 3 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 4 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 5 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 6 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 7 | 3300003373 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 8 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 14 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 18 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 19 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 20 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 21 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 22 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 23 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 24 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 25 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 26 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009993 | Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG | Metagenome | Rhizosphere |
| 32 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 37 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 38 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 39 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 40 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 51 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 52 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 53 | 3300030731 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 | Metagenome | Rhizosphere |
| 54 | 3300030736 | Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 | Metagenome | Rhizosphere |
| 55 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 56 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 57 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 58 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 59 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 60 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 61 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 62 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 63 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 64 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 65 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 66 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 67 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 68 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 69 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 70 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 71 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 72 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 73 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 74 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 75 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 76 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 77 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 78 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 79 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 80 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 81 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 82 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 83 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 94 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 95 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 96 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 97 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 98 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 99 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 113 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 114 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 123 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 124 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 125 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 127 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 128 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 129 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 130 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 131 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 132 | 2643221961 | Aeromicrobium sp. Root236 | Isolate | Unclassified |
| 133 | 2643221962 | Aeromicrobium sp. Root344 | Isolate | Unclassified |
| 134 | 2738543027 | Promicromonospora sp. CF082 | Isolate | Unclassified |
| 135 | 2739367654 | Promicromonospora sp. YR516 | Isolate | Unclassified |
| 136 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 137 | 2758568522 | Promicromonospora thailandica SAI-039 | Isolate | Unclassified |
| 138 | 2773857933 | Frankia sp. BMG5.30 | Isolate | Nodule |
| 139 | 2791354901 | Actinophytocola xanthii 11-183 | Isolate | Rhizosphere |
| 140 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 141 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 142 | 2808606394 | Promicromonospora sp. C35 | Isolate | Unclassified |
| 143 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 144 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 145 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 146 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 147 | 2870721527 | Saccharothrix ecbatanensis DSM 45486 | Isolate | Rhizosphere |
| 148 | 2873314349 | Sphaerisporangium siamense DSM 45784 | Isolate | Rhizosphere |
| 149 | 2883821847 | Microlunatus elymi KUDC0627 | Isolate | Rhizosphere |
| 150 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 151 | 2899359706 | Amycolatopsis anabasis EGI 650086 | Isolate | Unclassified |
| 152 | 2915768154 | Amycolatopsis pittospori PIP199 | Isolate | Unclassified |
| 153 | 2917736166 | Amycolatopsis dendrobii DR6-1 | Isolate | Unclassified |
| 154 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 155 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 156 | 8053945823 | Actinomadura terrae OS3-83 | Isolate | Rhizosphere |
| 157 | 8054913762 | Frankia gtarii Agncl-10 | Isolate | Nodule |
| 158 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.34 |
| Metatranscriptomes | 1.29 |
| Isolates | 13.36 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.59 |
| Nodule | 0.86 |
| Rhizoplane | 0.86 |
| Rhizosphere | 78.02 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0307513_10140825 | 3300031456 | Bacteria | 2339 |
| 2 | JGI24740J21852_10045841 | 3300001979 | Bacteria | 1287 |
| 3 | JGI24739J22299_10076106 | 3300001989 | Bacteria | 1036 |
| 4 | JGI24737J22298_10040998 | 3300001990 | Bacteria | 1420 |
| 5 | JGI24735J21928_10022854 | 3300002067 | Bacteria | 1900 |
| 6 | JGI25406J46586_10000733 | 3300003203 | Bacteria | 15312 |
| 7 | JGI25407J50210_10009901 | 3300003373 | Bacteria | 2420 |
| 8 | Ga0070661_100504543 | 3300005344 | Bacteria | 969 |
| 9 | Ga0070668_100005558 | 3300005347 | Bacteria | 9356 |
| 10 | Ga0070659_100059288 | 3300005366 | Bacteria | 3022 |
| 11 | Ga0070714_100000106 | 3300005435 | Bacteria | 70067 |
| 12 | Ga0070714_100003978 | 3300005435 | Bacteria | 11116 |
| 13 | Ga0070714_100130863 | 3300005435 | Bacteria | 2242 |
| 14 | Ga0070714_100327188 | 3300005435 | Bacteria | 1434 |
| 15 | Ga0070713_100084708 | 3300005436 | Bacteria | 2713 |
| 16 | Ga0070710_10000259 | 3300005437 | Bacteria | 25114 |
| 17 | Ga0070700_100000032 | 3300005441 | Bacteria | 114995 |
| 18 | Ga0070663_100001357 | 3300005455 | Bacteria | 13376 |
| 19 | Ga0070698_100004509 | 3300005471 | Bacteria | 15312 |
| 20 | Ga0068853_100033956 | 3300005539 | Bacteria | 4327 |
| 21 | Ga0068853_100480689 | 3300005539 | Bacteria | 1171 |
| 22 | Ga0081455_10000045 | 3300005937 | Bacteria | 128603 |
| 23 | Ga0081455_10002460 | 3300005937 | Bacteria | 22057 |
| 24 | Ga0081538_10000255 | 3300005981 | Bacteria | 60411 |
| 25 | Ga0081538_10020820 | 3300005981 | Bacteria | 4814 |
| 26 | Ga0081539_10000509 | 3300005985 | Bacteria | 80756 |
| 27 | Ga0081539_10000672 | 3300005985 | Bacteria | 68487 |
| 28 | Ga0075364_10026379 | 3300006051 | Bacteria | 3707 |
| 29 | Ga0075364_10121832 | 3300006051 | Bacteria | 1746 |
| 30 | Ga0075428_100002933 | 3300006844 | Bacteria | 18598 |
| 31 | Ga0075428_100197676 | 3300006844 | Bacteria | 2174 |
| 32 | Ga0075430_100028549 | 3300006846 | Bacteria | 4739 |
| 33 | Ga0075430_100074219 | 3300006846 | Bacteria | 2852 |
| 34 | Ga0075431_100000146 | 3300006847 | Bacteria | 47784 |
| 35 | Ga0075431_100011446 | 3300006847 | Bacteria | 8941 |
| 36 | Ga0075431_100248561 | 3300006847 | Bacteria | 1807 |
| 37 | Ga0075429_100035515 | 3300006880 | Bacteria | 4335 |
| 38 | Ga0111539_10076394 | 3300009094 | Bacteria | 3944 |
| 39 | Ga0114129_10047177 | 3300009147 | Bacteria | 6054 |
| 40 | Ga0114129_10316701 | 3300009147 | Bacteria | 2075 |
| 41 | Ga0105243_10435165 | 3300009148 | Bacteria | 1227 |
| 42 | Ga0105237_10404893 | 3300009545 | Bacteria | 1369 |
| 43 | Ga0105238_10052781 | 3300009551 | Bacteria | 4086 |
| 44 | Ga0105028_104340 | 3300009993 | Bacteria | 1477 |
| 45 | Ga0105246_10113669 | 3300011119 | Bacteria | 1993 |
| 46 | Ga0157370_10029999 | 3300013104 | Bacteria | 5330 |
| 47 | Ga0157378_10271916 | 3300013297 | Bacteria | 1630 |
| 48 | Ga0157372_10000057 | 3300013307 | Bacteria | 125915 |
| 49 | Ga0157372_10407847 | 3300013307 | Bacteria | 1583 |
| 50 | Ga0206353_10879439 | 3300020082 | Bacteria | 3429 |
| 51 | Ga0206353_11508312 | 3300020082 | Bacteria | 3035 |
| 52 | Ga0213876_10086285 | 3300021384 | Bacteria | 1661 |
| 53 | Ga0213875_10000488 | 3300021388 | Bacteria | 33637 |
| 54 | Ga0213875_10000709 | 3300021388 | Bacteria | 25572 |
| 55 | Ga0213875_10101757 | 3300021388 | Bacteria | 1341 |
| 56 | Ga0224712_10000790 | 3300022467 | Bacteria | 6661 |
| 57 | Ga0207692_10000446 | 3300025898 | Bacteria | 14597 |
| 58 | Ga0207694_10024646 | 3300025924 | Bacteria | 4570 |
| 59 | Ga0207694_10044781 | 3300025924 | Bacteria | 3417 |
| 60 | Ga0207700_10042917 | 3300025928 | Bacteria | 3319 |
| 61 | Ga0207664_10000047 | 3300025929 | Bacteria | 139122 |
| 62 | Ga0207664_10009332 | 3300025929 | Bacteria | 6878 |
| 63 | Ga0207664_10072370 | 3300025929 | Bacteria | 2779 |
| 64 | Ga0207664_10252507 | 3300025929 | Bacteria | 1540 |
| 65 | Ga0207690_10168252 | 3300025932 | Bacteria | 1640 |
| 66 | Ga0207668_10023971 | 3300025972 | Bacteria | 3931 |
| 67 | Ga0207639_10129298 | 3300026041 | Bacteria | 2088 |
| 68 | Ga0207678_10000846 | 3300026067 | Bacteria | 28056 |
| 69 | Ga0207708_10000045 | 3300026075 | Bacteria | 118159 |
| 70 | Ga0207674_10222295 | 3300026116 | Bacteria | 1836 |
| 71 | Ga0207428_10008989 | 3300027907 | Bacteria | 9001 |
| 72 | Ga0307515_10014033 | 3300028794 | Bacteria | 14904 |
| 73 | Ga0307515_10122762 | 3300028794 | Bacteria | 2927 |
| 74 | Ga0307511_10000751 | 3300030521 | Bacteria | 34613 |
| 75 | Ga0316177_1107935 | 3300030731 | Bacteria | 3646 |
| 76 | Ga0316180_1034111 | 3300030736 | Bacteria | 2632 |
| 77 | Ga0307508_10032975 | 3300031616 | Bacteria | 4676 |
| 78 | Ga0307405_10232232 | 3300031731 | Bacteria | 1361 |
| 79 | Ga0307518_10000508 | 3300031838 | Bacteria | 29574 |
| 80 | Ga0307518_10120386 | 3300031838 | Bacteria | 1858 |
| 81 | Ga0307406_10161813 | 3300031901 | Bacteria | 1610 |
| 82 | Ga0307412_10123294 | 3300031911 | Bacteria | 1870 |
| 83 | Ga0307409_100100296 | 3300031995 | Bacteria | 2400 |
| 84 | Ga0307507_10000011 | 3300033179 | Bacteria | 261849 |
| 85 | Ga0307507_10086706 | 3300033179 | Bacteria | 2712 |
| 86 | Ga0307510_10068828 | 3300033180 | Bacteria | 3549 |
| 87 | Ga0395900_0136518 | 3300037418 | Bacteria | 2513 |
| 88 | Ga0436364_0132601 | 3300037853 | Bacteria | 24278 |
| 89 | Ga0436364_0533956 | 3300037853 | Bacteria | 5972 |
| 90 | Ga0436364_0711490 | 3300037853 | Bacteria | 21692 |
| 91 | Ga0436364_1223775 | 3300037853 | Bacteria | 8203 |
| 92 | Ga0395901_0357064 | 3300038443 | Bacteria | 1508 |
| 93 | Ga0436365_1821373 | 3300039437 | Bacteria | 2748 |
| 94 | Ga0436362_0806084 | 3300039453 | Bacteria | 17833 |
| 95 | Ga0451837_0459051 | 3300041494 | Bacteria | 1792 |
| 96 | Ga0466969_0002967 | 3300044656 | Bacteria | 9055 |
| 97 | Ga0466969_0003115 | 3300044656 | Bacteria | 8838 |
| 98 | Ga0466969_0029285 | 3300044656 | Bacteria | 2812 |
| 99 | Ga0466969_0032244 | 3300044656 | Bacteria | 2663 |
| 100 | Ga0466969_0068773 | 3300044656 | Bacteria | 1706 |
| 101 | Ga0466969_0093959 | 3300044656 | Bacteria | 1418 |
| 102 | Ga0466972_0003708 | 3300044658 | Bacteria | 7602 |
| 103 | Ga0466972_0058376 | 3300044658 | Bacteria | 1853 |
| 104 | Ga0466965_0050546 | 3300044683 | Bacteria | 2061 |
| 105 | Ga0466966_0001727 | 3300044684 | Bacteria | 14128 |
| 106 | Ga0466966_0005901 | 3300044684 | Bacteria | 8080 |
| 107 | Ga0466966_0009514 | 3300044684 | Bacteria | 6436 |
| 108 | Ga0466966_0028777 | 3300044684 | Bacteria | 3617 |
| 109 | Ga0466966_0044143 | 3300044684 | Bacteria | 2854 |
| 110 | Ga0466961_0001916 | 3300044693 | Bacteria | 12973 |
| 111 | Ga0466961_0030034 | 3300044693 | Bacteria | 3492 |
| 112 | Ga0466961_0036954 | 3300044693 | Bacteria | 3134 |
| 113 | Ga0466963_0000918 | 3300044694 | Bacteria | 15006 |
| 114 | Ga0466963_0007019 | 3300044694 | Bacteria | 6705 |
| 115 | Ga0466963_0045308 | 3300044694 | Bacteria | 2897 |
| 116 | Ga0466971_0000221 | 3300044719 | Bacteria | 21761 |
| 117 | Ga0466971_0000394 | 3300044719 | Bacteria | 16912 |
| 118 | Ga0466971_0004233 | 3300044719 | Bacteria | 6185 |
| 119 | Ga0466971_0019539 | 3300044719 | Bacteria | 3010 |
| 120 | Ga0466968_0020699 | 3300044735 | Bacteria | 2658 |
| 121 | Ga0466970_0037369 | 3300044765 | Bacteria | 2573 |
| 122 | Ga0466970_0039748 | 3300044765 | Bacteria | 2497 |
| 123 | Ga0466970_0082451 | 3300044765 | Bacteria | 1739 |
| 124 | Ga0466957_0004586 | 3300044842 | Bacteria | 7721 |
| 125 | Ga0466957_0079731 | 3300044842 | Bacteria | 2038 |
| 126 | Ga0466957_0314772 | 3300044842 | Bacteria | 1055 |
| 127 | Ga0466960_0010243 | 3300044901 | Bacteria | 3891 |
| 128 | Ga0466959_0001401 | 3300045049 | Bacteria | 14752 |
| 129 | Ga0466959_0003768 | 3300045049 | Bacteria | 10041 |
| 130 | Ga0466959_0004996 | 3300045049 | Bacteria | 8999 |
| 131 | Ga0466959_0019960 | 3300045049 | Bacteria | 4933 |
| 132 | Ga0466958_0003127 | 3300045836 | Bacteria | 8515 |
| 133 | Ga0466958_0026078 | 3300045836 | Bacteria | 3452 |
| 134 | Ga0466958_0063379 | 3300045836 | Bacteria | 2254 |
| 135 | Ga0466967_0001145 | 3300045976 | Bacteria | 14817 |
| 136 | Ga0466967_0007854 | 3300045976 | Bacteria | 7751 |
| 137 | Ga0466967_0050430 | 3300045976 | Bacteria | 3644 |
| 138 | Ga0466967_0096994 | 3300045976 | Bacteria | 2690 |
| 139 | Ga0466967_0110311 | 3300045976 | Bacteria | 2527 |
| 140 | Ga0466967_0118190 | 3300045976 | Bacteria | 2445 |
| 141 | Ga0466967_0295741 | 3300045976 | Bacteria | 1557 |
| 142 | Ga0466967_0346718 | 3300045976 | Bacteria | 1437 |
| 143 | Ga0466967_0348961 | 3300045976 | Bacteria | 1432 |
| 144 | Ga0495627_017143 | 3300046453 | Bacteria | 2467 |
| 145 | Ga0495627_029408 | 3300046453 | Bacteria | 1749 |
| 146 | Ga0495651_0002532 | 3300046462 | Bacteria | 14141 |
| 147 | Ga0495664_0064470 | 3300046477 | Bacteria | 2184 |
| 148 | Ga0495664_0204204 | 3300046477 | Bacteria | 1197 |
| 149 | Ga0495628_0026475 | 3300046516 | Bacteria | 4728 |
| 150 | Ga0495652_0001569 | 3300046529 | Bacteria | 25007 |
| 151 | Ga0495634_0156584 | 3300046642 | Bacteria | 1438 |
| 152 | Ga0495635_0006120 | 3300046663 | Bacteria | 8391 |
| 153 | Ga0495623_0012977 | 3300046679 | Bacteria | 5394 |
| 154 | Ga0495646_0024291 | 3300046680 | Bacteria | 3817 |
| 155 | Ga0495669_0023077 | 3300046684 | Bacteria | 2706 |
| 156 | Ga0496108_0060155 | 3300048911 | Bacteria | 3196 |
| 157 | Ga0496109_0098868 | 3300048912 | Bacteria | 2706 |
| 158 | Ga0496122_0032557 | 3300048925 | Bacteria | 4308 |
| 159 | Ga0496126_0000611 | 3300048929 | Bacteria | 67506 |
| 160 | Ga0501034_0139893 | 3300049571 | Bacteria | 2401 |
| 161 | Ga0501036_0001653 | 3300049572 | Bacteria | 17268 |
| 162 | Ga0501037_0162933 | 3300049573 | Bacteria | 1589 |
| 163 | Ga0501038_0146178 | 3300049574 | Bacteria | 1930 |
| 164 | Ga0501038_0169400 | 3300049574 | Bacteria | 1769 |
| 165 | Ga0501040_0017945 | 3300049576 | Bacteria | 4697 |
| 166 | Ga0501041_0002483 | 3300049577 | Bacteria | 10482 |
| 167 | Ga0501043_0017452 | 3300049579 | Bacteria | 5626 |
| 168 | Ga0501047_0136380 | 3300049581 | Bacteria | 2334 |
| 169 | Ga0501071_0008733 | 3300049587 | Bacteria | 6706 |
| 170 | Ga0501075_0014163 | 3300049591 | Bacteria | 5713 |
| 171 | Ga0501077_0127391 | 3300049593 | Bacteria | 1614 |
| 172 | Ga0501079_0054319 | 3300049741 | Bacteria | 3090 |
| 173 | Ga0501079_0149360 | 3300049741 | Bacteria | 1821 |
| 174 | Ga0501080_0042724 | 3300049742 | Bacteria | 4220 |
| 175 | Ga0501035_0204403 | 3300049822 | Bacteria | 1692 |
| 176 | Ga0501044_0159720 | 3300049823 | Bacteria | 2232 |
| 177 | Ga0501044_0187443 | 3300049823 | Bacteria | 2033 |
| 178 | nmdc:mga00v17_1389_c1 | 3300050491 | Bacteria | 12711 |
| 179 | nmdc:mga05p37_512_c1 | 3300050507 | Bacteria | 42901 |
| 180 | nmdc:mga05p37_6265_c1 | 3300050507 | Bacteria | 14012 |
| 181 | nmdc:mga09592_225_c1 | 3300050508 | Bacteria | 40713 |
| 182 | nmdc:mga0qj67_17282_c1 | 3300050509 | Bacteria | 5483 |
| 183 | nmdc:mga0qj67_63138_c1 | 3300050509 | Bacteria | 2945 |
| 184 | nmdc:mga06r32_1520_c1 | 3300050510 | Bacteria | 20844 |
| 185 | nmdc:mga06r32_37892_c1 | 3300050510 | Bacteria | 4563 |
| 186 | nmdc:mga06r32_439_c1 | 3300050510 | Bacteria | 35271 |
| 187 | nmdc:mga08y16_9134_c1 | 3300050511 | Bacteria | 10406 |
| 188 | Ga0495601_0002547 | 3300053077 | Bacteria | 10358 |
| 189 | Ga0495601_0024416 | 3300053077 | Bacteria | 3722 |
| 190 | Ga0495612_0008501 | 3300053078 | Bacteria | 4162 |
| 191 | Ga0495655_0063633 | 3300053083 | Bacteria | 1013 |
| 192 | Ga0495619_0140435 | 3300053085 | Bacteria | 1663 |
| 193 | Ga0500641_0001559 | 3300053096 | Bacteria | 8166 |
| 194 | Ga0500559_0008410 | 3300053136 | Bacteria | 4524 |
| 195 | Ga0500568_0030690 | 3300053139 | Bacteria | 2224 |
| 196 | Ga0501084_0019846 | 3300054114 | Bacteria | 5602 |
| 197 | Ga0466962_0000417 | 3300061719 | Bacteria | 18365 |
| 198 | Ga0466962_0002002 | 3300061719 | Bacteria | 9625 |
| 199 | Ga0466962_0006668 | 3300061719 | Bacteria | 5539 |
| 200 | Ga0466962_0041845 | 3300061719 | Bacteria | 2192 |
| 201 | Ga0530510_0058085 | 3300061734 | Bacteria | 2796 |
| 202 | 2559429008 | 2558860280 | Bacteria | 11429938 |
| 203 | 2583152368 | 2582580736 | Bacteria | 5325865 |
| 204 | 2586064238 | 2585427649 | Bacteria | 9053857 |
| 205 | 2644455267 | 2643221681 | Bacteria | 3707866 |
| 206 | 2645721571 | 2643221961 | Bacteria | 3919167 |
| 207 | 2645724473 | 2643221962 | Bacteria | 3874254 |
| 208 | 2739328492 | 2738543027 | Bacteria | 6409078 |
| 209 | 2739605853 | 2739367654 | Bacteria | 6049412 |
| 210 | 2753074252 | 2751185734 | Bacteria | 8863695 |
| 211 | 2760307300 | 2758568522 | Bacteria | 5953541 |
| 212 | 2774905753 | 2773857933 | Bacteria | 5818019 |
| 213 | 2791917237 | 2791354901 | Bacteria | 8322202 |
| 214 | 2795785618 | 2795385470 | Bacteria | 8317180 |
| 215 | 2795796395 | 2795385472 | Bacteria | 6627535 |
| 216 | 2809029094 | 2808606394 | Bacteria | 6248540 |
| 217 | 2809586514 | 2808606522 | Bacteria | 9488490 |
| 218 | 2816422417 | 2816332119 | Bacteria | 8120218 |
| 219 | 2816505348 | 2816332139 | Bacteria | 9138787 |
| 220 | 2866618808 | 2866612099 | Bacteria | 7543886 |
| 221 | 2870727306 | 2870721527 | Bacteria | 9689237 |
| 222 | 2873319017 | 2873314349 | Bacteria | 8512634 |
| 223 | 2883825034 | 2883821847 | Bacteria | 5121194 |
| 224 | 2891327293 | 2891326441 | Bacteria | 6439512 |
| 225 | 2899368327 | 2899359706 | Bacteria | 10940472 |
| 226 | 2915775821 | 2915768154 | Bacteria | 8424322 |
| 227 | 2917737567 | 2917736166 | Bacteria | 9690793 |
| 228 | 8003323355 | 8003314358 | Bacteria | 10575343 |
| 229 | 8047719850 | 8047710418 | Bacteria | 11023148 |
| 230 | 8053947567 | 8053945823 | Bacteria | 8962862 |
| 231 | 8054918346 | 8054913762 | Bacteria | 7713009 |
| 232 | 8056208929 | 8056207758 | Bacteria | 8639239 |
| 233 | Ga0307513_10140825 | |||
| 234 | JGI24740J21852_10045841 | |||
| 235 | JGI24739J22299_10076106 | |||
| 236 | JGI24737J22298_10040998 | |||
| 237 | JGI24735J21928_10022854 | |||
| 238 | JGI25406J46586_10000733 | |||
| 239 | JGI25407J50210_10009901 | |||
| 240 | Ga0070661_100504543 | |||
| 241 | Ga0070668_100005558 | |||
| 242 | Ga0070659_100059288 | |||
| 243 | Ga0070714_100000106 | |||
| 244 | Ga0070714_100003978 | |||
| 245 | Ga0070714_100130863 | |||
| 246 | Ga0070714_100327188 | |||
| 247 | Ga0070713_100084708 | |||
| 248 | Ga0070710_10000259 | |||
| 249 | Ga0070700_100000032 | |||
| 250 | Ga0070663_100001357 | |||
| 251 | Ga0070698_100004509 | |||
| 252 | Ga0068853_100033956 | |||
| 253 | Ga0068853_100480689 | |||
| 254 | Ga0081455_10000045 | |||
| 255 | Ga0081455_10002460 | |||
| 256 | Ga0081538_10000255 | |||
| 257 | Ga0081538_10020820 | |||
| 258 | Ga0081539_10000509 | |||
| 259 | Ga0081539_10000672 | |||
| 260 | Ga0075364_10026379 | |||
| 261 | Ga0075364_10121832 | |||
| 262 | Ga0075428_100002933 | |||
| 263 | Ga0075428_100197676 | |||
| 264 | Ga0075430_100028549 | |||
| 265 | Ga0075430_100074219 | |||
| 266 | Ga0075431_100000146 | |||
| 267 | Ga0075431_100011446 | |||
| 268 | Ga0075431_100248561 | |||
| 269 | Ga0075429_100035515 | |||
| 270 | Ga0111539_10076394 | |||
| 271 | Ga0114129_10047177 | |||
| 272 | Ga0114129_10316701 | |||
| 273 | Ga0105243_10435165 | |||
| 274 | Ga0105237_10404893 | |||
| 275 | Ga0105238_10052781 | |||
| 276 | Ga0105028_104340 | |||
| 277 | Ga0105246_10113669 | |||
| 278 | Ga0157370_10029999 | |||
| 279 | Ga0157378_10271916 | |||
| 280 | Ga0157372_10000057 | |||
| 281 | Ga0157372_10407847 | |||
| 282 | Ga0206353_10879439 | |||
| 283 | Ga0206353_11508312 | |||
| 284 | Ga0213876_10086285 | |||
| 285 | Ga0213875_10000488 | |||
| 286 | Ga0213875_10000709 | |||
| 287 | Ga0213875_10101757 | |||
| 288 | Ga0224712_10000790 | |||
| 289 | Ga0207692_10000446 | |||
| 290 | Ga0207694_10024646 | |||
| 291 | Ga0207694_10044781 | |||
| 292 | Ga0207700_10042917 | |||
| 293 | Ga0207664_10000047 | |||
| 294 | Ga0207664_10009332 | |||
| 295 | Ga0207664_10072370 | |||
| 296 | Ga0207664_10252507 | |||
| 297 | Ga0207690_10168252 | |||
| 298 | Ga0207668_10023971 | |||
| 299 | Ga0207639_10129298 | |||
| 300 | Ga0207678_10000846 | |||
| 301 | Ga0207708_10000045 | |||
| 302 | Ga0207674_10222295 | |||
| 303 | Ga0207428_10008989 | |||
| 304 | Ga0307515_10014033 | |||
| 305 | Ga0307515_10122762 | |||
| 306 | Ga0307511_10000751 | |||
| 307 | Ga0316177_1107935 | |||
| 308 | Ga0316180_1034111 | |||
| 309 | Ga0307508_10032975 | |||
| 310 | Ga0307405_10232232 | |||
| 311 | Ga0307518_10000508 | |||
| 312 | Ga0307518_10120386 | |||
| 313 | Ga0307406_10161813 | |||
| 314 | Ga0307412_10123294 | |||
| 315 | Ga0307409_100100296 | |||
| 316 | Ga0307507_10000011 | |||
| 317 | Ga0307507_10086706 | |||
| 318 | Ga0307510_10068828 | |||
| 319 | Ga0395900_0136518 | |||
| 320 | Ga0436364_0132601 | |||
| 321 | Ga0436364_0533956 | |||
| 322 | Ga0436364_0711490 | |||
| 323 | Ga0436364_1223775 | |||
| 324 | Ga0395901_0357064 | |||
| 325 | Ga0436365_1821373 | |||
| 326 | Ga0436362_0806084 | |||
| 327 | Ga0451837_0459051 | |||
| 328 | Ga0466969_0002967 | |||
| 329 | Ga0466969_0003115 | |||
| 330 | Ga0466969_0029285 | |||
| 331 | Ga0466969_0032244 | |||
| 332 | Ga0466969_0068773 | |||
| 333 | Ga0466969_0093959 | |||
| 334 | Ga0466972_0003708 | |||
| 335 | Ga0466972_0058376 | |||
| 336 | Ga0466965_0050546 | |||
| 337 | Ga0466966_0001727 | |||
| 338 | Ga0466966_0005901 | |||
| 339 | Ga0466966_0009514 | |||
| 340 | Ga0466966_0028777 | |||
| 341 | Ga0466966_0044143 | |||
| 342 | Ga0466961_0001916 | |||
| 343 | Ga0466961_0030034 | |||
| 344 | Ga0466961_0036954 | |||
| 345 | Ga0466963_0000918 | |||
| 346 | Ga0466963_0007019 | |||
| 347 | Ga0466963_0045308 | |||
| 348 | Ga0466971_0000221 | |||
| 349 | Ga0466971_0000394 | |||
| 350 | Ga0466971_0004233 | |||
| 351 | Ga0466971_0019539 | |||
| 352 | Ga0466968_0020699 | |||
| 353 | Ga0466970_0037369 | |||
| 354 | Ga0466970_0039748 | |||
| 355 | Ga0466970_0082451 | |||
| 356 | Ga0466957_0004586 | |||
| 357 | Ga0466957_0079731 | |||
| 358 | Ga0466957_0314772 | |||
| 359 | Ga0466960_0010243 | |||
| 360 | Ga0466959_0001401 | |||
| 361 | Ga0466959_0003768 | |||
| 362 | Ga0466959_0004996 | |||
| 363 | Ga0466959_0019960 | |||
| 364 | Ga0466958_0003127 | |||
| 365 | Ga0466958_0026078 | |||
| 366 | Ga0466958_0063379 | |||
| 367 | Ga0466967_0001145 | |||
| 368 | Ga0466967_0007854 | |||
| 369 | Ga0466967_0050430 | |||
| 370 | Ga0466967_0096994 | |||
| 371 | Ga0466967_0110311 | |||
| 372 | Ga0466967_0118190 | |||
| 373 | Ga0466967_0295741 | |||
| 374 | Ga0466967_0346718 | |||
| 375 | Ga0466967_0348961 | |||
| 376 | Ga0495627_017143 | |||
| 377 | Ga0495627_029408 | |||
| 378 | Ga0495651_0002532 | |||
| 379 | Ga0495664_0064470 | |||
| 380 | Ga0495664_0204204 | |||
| 381 | Ga0495628_0026475 | |||
| 382 | Ga0495652_0001569 | |||
| 383 | Ga0495634_0156584 | |||
| 384 | Ga0495635_0006120 | |||
| 385 | Ga0495623_0012977 | |||
| 386 | Ga0495646_0024291 | |||
| 387 | Ga0495669_0023077 | |||
| 388 | Ga0496108_0060155 | |||
| 389 | Ga0496109_0098868 | |||
| 390 | Ga0496122_0032557 | |||
| 391 | Ga0496126_0000611 | |||
| 392 | Ga0501034_0139893 | |||
| 393 | Ga0501036_0001653 | |||
| 394 | Ga0501037_0162933 | |||
| 395 | Ga0501038_0146178 | |||
| 396 | Ga0501038_0169400 | |||
| 397 | Ga0501040_0017945 | |||
| 398 | Ga0501041_0002483 | |||
| 399 | Ga0501043_0017452 | |||
| 400 | Ga0501047_0136380 | |||
| 401 | Ga0501071_0008733 | |||
| 402 | Ga0501075_0014163 | |||
| 403 | Ga0501077_0127391 | |||
| 404 | Ga0501079_0054319 | |||
| 405 | Ga0501079_0149360 | |||
| 406 | Ga0501080_0042724 | |||
| 407 | Ga0501035_0204403 | |||
| 408 | Ga0501044_0159720 | |||
| 409 | Ga0501044_0187443 | |||
| 410 | nmdc:mga00v17_1389_c1 | |||
| 411 | nmdc:mga05p37_512_c1 | |||
| 412 | nmdc:mga05p37_6265_c1 | |||
| 413 | nmdc:mga09592_225_c1 | |||
| 414 | nmdc:mga0qj67_17282_c1 | |||
| 415 | nmdc:mga0qj67_63138_c1 | |||
| 416 | nmdc:mga06r32_1520_c1 | |||
| 417 | nmdc:mga06r32_37892_c1 | |||
| 418 | nmdc:mga06r32_439_c1 | |||
| 419 | nmdc:mga08y16_9134_c1 | |||
| 420 | Ga0495601_0002547 | |||
| 421 | Ga0495601_0024416 | |||
| 422 | Ga0495612_0008501 | |||
| 423 | Ga0495655_0063633 | |||
| 424 | Ga0495619_0140435 | |||
| 425 | Ga0500641_0001559 | |||
| 426 | Ga0500559_0008410 | |||
| 427 | Ga0500568_0030690 | |||
| 428 | Ga0501084_0019846 | |||
| 429 | Ga0466962_0000417 | |||
| 430 | Ga0466962_0002002 | |||
| 431 | Ga0466962_0006668 | |||
| 432 | Ga0466962_0041845 | |||
| 433 | Ga0530510_0058085 | |||
| 434 | 2559429008 | |||
| 435 | 2583152368 | |||
| 436 | 2586064238 | |||
| 437 | 2644455267 | |||
| 438 | 2645721571 | |||
| 439 | 2645724473 | |||
| 440 | 2739328492 | |||
| 441 | 2739605853 | |||
| 442 | 2753074252 | |||
| 443 | 2760307300 | |||
| 444 | 2774905753 | |||
| 445 | 2791917237 | |||
| 446 | 2795785618 | |||
| 447 | 2795796395 | |||
| 448 | 2809029094 | |||
| 449 | 2809586514 | |||
| 450 | 2816422417 | |||
| 451 | 2816505348 | |||
| 452 | 2866618808 | |||
| 453 | 2870727306 | |||
| 454 | 2873319017 | |||
| 455 | 2883825034 | |||
| 456 | 2891327293 | |||
| 457 | 2899368327 | |||
| 458 | 2915775821 | |||
| 459 | 2917737567 | |||
| 460 | 8003323355 | |||
| 461 | 8047719850 | |||
| 462 | 8053947567 | |||
| 463 | 8054918346 | |||
| 464 | 8056208929 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3mp3-assembly2.cif.gz_D | crystal structure of human lyase in complex with inhibitor hg-coa | 0.9273 | 12 | 305 |
| 3mp4-assembly3.cif.gz_F | crystal structure of human lyase r41m mutant | 0.9272 | 12 | 305 |
| 3mp5-assembly2.cif.gz_C | crystal structure of human lyase r41m in complex with hmg-coa | 0.9267 | 12 | 306 |
| 2cw6-assembly3.cif.gz_F | crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria | 0.9253 | 12 | 306 |
| 2cw6-assembly2.cif.gz_D | crystal structure of human hmg-coa lyase: insights into catalysis and the molecular basis for hydroxymethylglutaric aciduria | 0.9225 | 12 | 306 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q0JNR8_151_451_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.929 | 9 | 307 | 3.20.20.70 |
| af_Q0JNR8_151_451_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9172 | 9 | 307 | 3.20.20.70 |
| 1ydoB00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9152 | 12 | 308 | 3.20.20.70 |
| 1ydoB00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9093 | 12 | 308 | 3.20.20.70 |
| af_Q4DIQ4_8_322_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.8208 | 13 | 306 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A287KT43-F1-model_v4 | deleted | 0.9495 | 81 | 242 |
|
| AF-A0A3L7HVQ8-F1-model_v4 | deleted | 0.9486 | 68 | 233 |
|
| AF-A0A540V3Z6-F1-model_v4 | Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.9474 | 34 | 206 |
GO:0004419
GO:0006552 GO:0046872 GO:0046951 |
| AF-A0A2I4BYY9-F1-model_v4 | hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.9472 | 69 | 236 |
GO:0004419
GO:0006552 GO:0046872 GO:0046951 |
| AF-A0A820KYJ0-F1-model_v4 | hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) | 0.9429 | 103 | 242 |
GO:0004419
GO:0006552 GO:0046872 GO:0046951 |