F344979

General Info

Members Datasets Scaffolds Average Seq Length
232 157 232 269

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10563774|Ga0105240_105637742
Length 314
Sequence VIKQLGHGRLCLTIWRRAQVGRERRLSTDLTSAPARVNSDRISGRGPAVTDQTAVAAHVERVRRDGYTIVENAIEPELIDALNQALKGLERELGARPAMNQFEGHRTVRIYNLLARGAVFAKVPVHPSVLPIVEGVLDSGCLISSLSSIAIDPGEIAQPIHADDMVIPLDKPHRPIVCNSMWALTDFTAANGATRLAPGSHLKQNPTYGATYDTIAAEMPKGSVLIWEGALWHGGGANTTGERRTGIAMNYCAGFIRQQENQQLGLAPELVKTFPPRLQELVGYGVYQGLIGHIDKHSPAQLLNGEGEFKSIWD

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
94 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
95 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
96 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
97 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
103 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
104 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
105 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
106 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
107 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
108 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
109 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
110 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
113 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
118 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
121 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
124 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
129 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
130 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
153 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.28
Metatranscriptomes 1.72
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.72
Nodule 0
Rhizoplane 4.31
Rhizosphere 90.95
Stem 0
Stem Tuber 0
Unclassified 3.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10018373 3300005327 Bacteria 5598
2 Ga0070658_10037905 3300005327 Bacteria 3887
3 Ga0070690_100235519 3300005330 Bacteria 1289
4 Ga0070666_10001084 3300005335 Bacteria 16622
5 Ga0070680_100004092 3300005336 Bacteria 10923
6 Ga0068868_100094420 3300005338 Bacteria 2413
7 Ga0070661_100000300 3300005344 Bacteria 39901
8 Ga0070675_100368948 3300005354 Bacteria 1276
9 Ga0070671_100027462 3300005355 Bacteria 4685
10 Ga0070667_100472174 3300005367 Bacteria 1148
11 Ga0070667_100551877 3300005367 Bacteria 1059
12 Ga0070709_10002313 3300005434 Bacteria 10352
13 Ga0070714_100069602 3300005435 Unclassified 3040
14 Ga0070713_100000044 3300005436 Bacteria 78106
15 Ga0070678_100047352 3300005456 Bacteria 3089
16 Ga0070678_100382034 3300005456 Bacteria 1219
17 Ga0070681_10014799 3300005458 Bacteria 7758
18 Ga0070681_10511118 3300005458 Bacteria 1114
19 Ga0070707_100769862 3300005468 Bacteria 926
20 Ga0070698_100014948 3300005471 Bacteria 8206
21 Ga0070699_100148982 3300005518 Bacteria 2069
22 Ga0070684_100254705 3300005535 Bacteria 1604
23 Ga0068853_100049442 3300005539 Bacteria 3614
24 Ga0068853_100069305 3300005539 Bacteria 3068
25 Ga0070695_100321715 3300005545 Bacteria 1150
26 Ga0070696_100266173 3300005546 Bacteria 1302
27 Ga0070696_100326162 3300005546 Bacteria 1183
28 Ga0070693_100314121 3300005547 Bacteria 1061
29 Ga0070693_100337790 3300005547 Unclassified 1027
30 Ga0070665_100421929 3300005548 Bacteria 1343
31 Ga0068855_100069675 3300005563 Bacteria 4093
32 Ga0070664_100013348 3300005564 Bacteria 6690
33 Ga0070664_100116061 3300005564 Bacteria 2341
34 Ga0068857_100143257 3300005577 Bacteria 2161
35 Ga0068856_100000406 3300005614 Bacteria 47326
36 Ga0068856_100058638 3300005614 Bacteria 3802
37 Ga0068852_100344352 3300005616 Bacteria 1454
38 Ga0068864_100024034 3300005618 Bacteria 5123
39 Ga0068863_100399641 3300005841 Bacteria 1344
40 Ga0068858_100032976 3300005842 Bacteria 4810
41 Ga0068862_100025694 3300005844 Bacteria 4946
42 Ga0070717_10040094 3300006028 Bacteria 3813
43 Ga0075365_10010607 3300006038 Bacteria 5377
44 Ga0070716_100020992 3300006173 Bacteria 3436
45 Ga0070712_100000983 3300006175 Bacteria 17123
46 Ga0075367_10041475 3300006178 Bacteria 2691
47 Ga0075367_10128731 3300006178 Bacteria 1564
48 Ga0068871_100278350 3300006358 Bacteria 1463
49 Ga0068871_100314701 3300006358 Unclassified 1377
50 Ga0075434_100128763 3300006871 Bacteria 2549
51 Ga0075436_100004062 3300006914 Bacteria 10039
52 Ga0075436_100237303 3300006914 Bacteria 1296
53 Ga0105240_10005884 3300009093 Bacteria 18159
54 Ga0105240_10028251 3300009093 Bacteria 7328
55 Ga0105240_10477406 3300009093 Bacteria 1390
56 Ga0105240_10563774 3300009093 Bacteria 1258
57 Ga0111539_10268912 3300009094 Bacteria 1984
58 Ga0111539_10389504 3300009094 Bacteria 1623
59 Ga0105245_10332363 3300009098 Bacteria 1500
60 Ga0114129_10124319 3300009147 Bacteria 3548
61 Ga0105241_10077469 3300009174 Bacteria 2595
62 Ga0105242_10203997 3300009176 Bacteria 1758
63 Ga0105248_10128965 3300009177 Bacteria 2853
64 Ga0105248_10155028 3300009177 Bacteria 2585
65 Ga0105248_10861615 3300009177 Bacteria 1023
66 Ga0105237_10247113 3300009545 Bacteria 1786
67 Ga0105238_10442157 3300009551 Bacteria 1297
68 Ga0157373_10000062 3300013100 Bacteria 95451
69 Ga0157373_10009453 3300013100 Bacteria 7202
70 Ga0157370_10003408 3300013104 Bacteria 18677
71 Ga0157369_10002906 3300013105 Bacteria 20475
72 Ga0157375_10053401 3300013308 Bacteria 3976
73 Ga0157375_10418128 3300013308 Bacteria 1507
74 Ga0163163_10025799 3300014325 Bacteria 5606
75 Ga0163163_10087079 3300014325 Bacteria 3133
76 Ga0157379_10000456 3300014968 Bacteria 33130
77 Ga0157379_10052793 3300014968 Unclassified 3630
78 Ga0197907_10426220 3300020069 Bacteria 4567
79 Ga0206351_10453979 3300020077 Bacteria 1820
80 Ga0206353_10009869 3300020082 Bacteria 8961
81 Ga0213876_10080127 3300021384 Bacteria 1726
82 Ga0224712_10002997 3300022467 Bacteria 4294
83 Ga0207680_10001009 3300025903 Bacteria 13270
84 Ga0207699_10001123 3300025906 Bacteria 12662
85 Ga0207699_10241759 3300025906 Bacteria 1240
86 Ga0207705_10035431 3300025909 Bacteria 3570
87 Ga0207705_10262579 3300025909 Bacteria 1319
88 Ga0207654_10186469 3300025911 Bacteria 1357
89 Ga0207707_10186283 3300025912 Bacteria 1811
90 Ga0207695_10001195 3300025913 Bacteria 44633
91 Ga0207695_10061371 3300025913 Bacteria 3885
92 Ga0207695_10277158 3300025913 Bacteria 1571
93 Ga0207693_10002137 3300025915 Bacteria 17228
94 Ga0207660_10020449 3300025917 Bacteria 4442
95 Ga0207649_10000078 3300025920 Bacteria 82996
96 Ga0207649_10202645 3300025920 Bacteria 1403
97 Ga0207652_10001817 3300025921 Bacteria 18490
98 Ga0207646_10635660 3300025922 Bacteria 957
99 Ga0207681_10594395 3300025923 Bacteria 914
100 Ga0207694_10140683 3300025924 Bacteria 1940
101 Ga0207694_10248291 3300025924 Bacteria 1456
102 Ga0207659_10619690 3300025926 Bacteria 923
103 Ga0207700_10000017 3300025928 Bacteria 195983
104 Ga0207664_10067831 3300025929 Unclassified 2864
105 Ga0207644_10027445 3300025931 Bacteria 3932
106 Ga0207644_10198466 3300025931 Bacteria 1582
107 Ga0207686_10038381 3300025934 Bacteria 2898
108 Ga0207665_10068861 3300025939 Bacteria 2412
109 Ga0207711_10027271 3300025941 Bacteria 4797
110 Ga0207711_10098381 3300025941 Bacteria 2585
111 Ga0207679_10004799 3300025945 Bacteria 8423
112 Ga0207679_10029143 3300025945 Bacteria 3841
113 Ga0207651_10047175 3300025960 Bacteria 2903
114 Ga0207668_10414236 3300025972 Bacteria 1142
115 Ga0207677_10291351 3300026023 Bacteria 1344
116 Ga0207703_10139989 3300026035 Unclassified 2099
117 Ga0207639_10036415 3300026041 Bacteria 3647
118 Ga0207702_10000322 3300026078 Bacteria 54765
119 Ga0207702_10006697 3300026078 Bacteria 9898
120 Ga0207648_10188464 3300026089 Bacteria 1827
121 Ga0207648_10455980 3300026089 Bacteria 1165
122 Ga0207676_10019236 3300026095 Bacteria 4979
123 Ga0207676_10436554 3300026095 Bacteria 1231
124 Ga0207674_10000003 3300026116 Bacteria 241674
125 Ga0207683_10220701 3300026121 Bacteria 1727
126 Ga0207683_10409716 3300026121 Bacteria 1248
127 Ga0268265_10150316 3300028380 Bacteria 1963
128 Ga0265318_10000077 3300028577 Bacteria 92814
129 Ga0265318_10008096 3300028577 Bacteria 4701
130 Ga0265338_10006217 3300028800 Bacteria 15296
131 Ga0265338_10038830 3300028800 Unclassified 4503
132 Ga0265338_10067488 3300028800 Bacteria 3089
133 Ga0265338_10098205 3300028800 Bacteria 2397
134 Ga0265338_10337071 3300028800 Bacteria 1088
135 Ga0307511_10002987 3300030521 Bacteria 17501
136 Ga0265320_10001992 3300031240 Bacteria 14414
137 Ga0265325_10000910 3300031241 Bacteria 21373
138 Ga0265325_10097137 3300031241 Bacteria 1446
139 Ga0265339_10003816 3300031249 Bacteria 10476
140 Ga0265339_10011563 3300031249 Bacteria 5426
141 Ga0265331_10000011 3300031250 Bacteria 308171
142 Ga0265331_10000506 3300031250 Bacteria 36469
143 Ga0265327_10000007 3300031251 Bacteria 678515
144 Ga0265327_10000280 3300031251 Bacteria 100757
145 Ga0265327_10013249 3300031251 Bacteria 5490
146 Ga0265316_10051238 3300031344 Unclassified 3244
147 Ga0265316_10095640 3300031344 Bacteria 2262
148 Ga0307513_10159435 3300031456 Bacteria 2151
149 Ga0307509_10010349 3300031507 Bacteria 11453
150 Ga0265313_10008934 3300031595 Bacteria 6580
151 Ga0265313_10046676 3300031595 Bacteria 2102
152 Ga0265313_10090871 3300031595 Bacteria 1371
153 Ga0265314_10043955 3300031711 Bacteria 3170
154 Ga0316576_10051126 3300031727 Bacteria 3007
155 Ga0373953_0007139 3300035117 Bacteria 3725
156 Ga0373956_0065233 3300035119 Bacteria 1654
157 Ga0373955_0014611 3300035172 Bacteria 3824
158 Ga0373955_0127540 3300035172 Viruses 1483
159 Ga0373931_0064105 3300035691 Bacteria 1988
160 Ga0373935_0098455 3300035692 Bacteria 1925
161 Ga0373935_0166849 3300035692 Bacteria 1504
162 Ga0373935_0338325 3300035692 Unclassified 1071
163 Ga0373927_0045665 3300035695 Bacteria 2833
164 Ga0373933_0028153 3300035724 Bacteria 3240
165 Ga0373933_0176400 3300035724 Bacteria 1362
166 Ga0373937_0010504 3300036401 Bacteria 8084
167 Ga0373937_0020118 3300036401 Bacteria 5981
168 Ga0373925_0122979 3300037068 Unclassified 2016
169 Ga0436365_0932862 3300039437 Bacteria 3349
170 Ga0436365_1329269 3300039437 Bacteria 3416
171 Ga0436365_1781586 3300039437 Bacteria 55120
172 Ga0466963_0061500 3300044694 Bacteria 2511
173 Ga0466958_0137659 3300045836 Bacteria 1536
174 Ga0466967_0255541 3300045976 Bacteria 1675
175 Ga0495642_0015987 3300046528 Bacteria 2921
176 Ga0495652_0060583 3300046529 Bacteria 3198
177 Ga0495645_0031140 3300046543 Bacteria 3886
178 Ga0495657_0064973 3300046675 Bacteria 2401
179 Ga0495658_0306690 3300046683 Bacteria 1005
180 Ga0495676_0051236 3300047321 Bacteria 3305
181 Ga0495680_0080892 3300047322 Bacteria 2454
182 Ga0495675_0042571 3300047444 Bacteria 2893
183 Ga0496104_0148247 3300048907 Bacteria 2253
184 Ga0496105_0289450 3300048908 Unclassified 1319
185 Ga0496107_0447233 3300048910 Bacteria 960
186 Ga0496108_0065651 3300048911 Bacteria 3059
187 Ga0496108_0082054 3300048911 Bacteria 2733
188 Ga0496109_0009712 3300048912 Bacteria 8213
189 Ga0496109_0031485 3300048912 Bacteria 4760
190 Ga0496112_0013109 3300048915 Bacteria 7650
191 Ga0496112_0391378 3300048915 Bacteria 1330
192 Ga0496113_0005946 3300048916 Bacteria 7672
193 Ga0501032_0003190 3300049569 Bacteria 12623
194 Ga0501032_0087292 3300049569 Bacteria 2072
195 Ga0501033_0081881 3300049570 Bacteria 2367
196 Ga0501034_0000858 3300049571 Bacteria 44982
197 Ga0501034_0007612 3300049571 Bacteria 11524
198 Ga0501034_0075773 3300049571 Bacteria 3371
199 Ga0501037_0007780 3300049573 Bacteria 7846
200 Ga0501037_0134440 3300049573 Bacteria 1772
201 Ga0501043_0162547 3300049579 Bacteria 1744
202 Ga0501046_0093001 3300049580 Bacteria 2318
203 Ga0501047_0001484 3300049581 Bacteria 22880
204 Ga0501047_0068957 3300049581 Bacteria 3406
205 Ga0501068_0253931 3300049584 Bacteria 1121
206 Ga0501069_0002125 3300049585 Bacteria 9978
207 Ga0501069_0126151 3300049585 Unclassified 1464
208 Ga0501070_0000325 3300049586 Bacteria 43267
209 Ga0501070_0011918 3300049586 Bacteria 7344
210 Ga0501070_0057467 3300049586 Unclassified 3225
211 Ga0501070_0077639 3300049586 Bacteria 2748
212 Ga0501070_0136425 3300049586 Bacteria 2026
213 Ga0501071_0097966 3300049587 Bacteria 2159
214 Ga0501072_0446341 3300049588 Bacteria 1025
215 Ga0501080_0000096 3300049742 Bacteria 59454
216 Ga0501080_0028626 3300049742 Bacteria 5186
217 Ga0501080_0137005 3300049742 Bacteria 2265
218 Ga0501080_0235588 3300049742 Bacteria 1672
219 Ga0501080_0327697 3300049742 Bacteria 1385
220 Ga0501080_0333089 3300049742 Bacteria 1372
221 Ga0501083_0072052 3300049744 Unclassified 2297
222 Ga0501044_0002508 3300049823 Bacteria 20936
223 Ga0501044_0057119 3300049823 Bacteria 4005
224 nmdc:mga05p37_172014_c1 3300050507 Bacteria 2641
225 nmdc:mga09592_34515_c1 3300050508 Bacteria 4228
226 nmdc:mga08y16_701247_c1 3300050511 Bacteria 1012
227 nmdc:mga0n895_220083_c1 3300050512 Bacteria 1928
228 nmdc:mga0n895_66575_c1 3300050512 Bacteria 3567
229 nmdc:mga08x19_1435_c1 3300050514 Bacteria 14734
230 nmdc:mga0a205_108183_c2 3300050515 Bacteria 1566
231 Ga0495612_0025716 3300053078 Bacteria 2364
232 Ga0500595_044248 3300053119 Bacteria 1412

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046529 Ga0495652_0060583 Ga0495652_0060583_889_1767 247
2 3300046543 Ga0495645_0031140 Ga0495645_0031140_1728_2606 247
3 3300047444 Ga0495675_0042571 Ga0495675_0042571_699_1577 247
4 3300031251 Ga0265327_10013249 Ga0265327_100132494 251
5 3300048908 Ga0496105_0289450 Ga0496105_0289450_288_1079 253
6 3300028577 Ga0265318_10008096 Ga0265318_100080965 254
7 3300031241 Ga0265325_10097137 Ga0265325_100971372 254
8 3300005354 Ga0070675_100368948 Ga0070675_1003689481 255
9 3300005367 Ga0070667_100472174 Ga0070667_1004721742 255
10 3300025926 Ga0207659_10619690 Ga0207659_106196901 255
11 3300050508 nmdc:mga09592_34515_c1 nmdc:mga09592_34515_c1_1296_2105 258
12 3300049581 Ga0501047_0001484 Ga0501047_0001484_11832_12620 259
13 3300053119 Ga0500595_044248 Ga0500595_044248_303_1085 259
14 3300035172 Ga0373955_0127540 Ga0373955_0127540_573_1370 260
15 3300049742 Ga0501080_0137005 Ga0501080_0137005_945_1730 260
16 3300028577 Ga0265318_10000077 Ga0265318_100000773 261
17 3300049587 Ga0501071_0097966 Ga0501071_0097966_512_1303 261
18 3300049588 Ga0501072_0446341 Ga0501072_0446341_219_1010 261
19 3300049742 Ga0501080_0235588 Ga0501080_0235588_490_1281 261
20 3300049742 Ga0501080_0327697 Ga0501080_0327697_525_1343 261
21 3300005841 Ga0068863_100399641 Ga0068863_1003996412 262
22 3300009093 Ga0105240_10563774 Ga0105240_105637742 262
23 3300021384 Ga0213876_10080127 Ga0213876_100801272 262
24 3300031456 Ga0307513_10159435 Ga0307513_101594352 262
25 3300049586 Ga0501070_0136425 Ga0501070_0136425_887_1687 262
26 3300005535 Ga0070684_100254705 Ga0070684_1002547051 263
27 3300005539 Ga0068853_100049442 Ga0068853_1000494422 263
28 3300005545 Ga0070695_100321715 Ga0070695_1003217152 263
29 3300005546 Ga0070696_100266173 Ga0070696_1002661732 263
30 3300005564 Ga0070664_100013348 Ga0070664_1000133483 263
31 3300005616 Ga0068852_100344352 Ga0068852_1003443522 263
32 3300009176 Ga0105242_10203997 Ga0105242_102039972 263
33 3300013100 Ga0157373_10000062 Ga0157373_1000006279 263
34 3300013100 Ga0157373_10009453 Ga0157373_100094534 263
35 3300025934 Ga0207686_10038381 Ga0207686_100383812 263
36 3300025945 Ga0207679_10004799 Ga0207679_100047993 263
37 3300026041 Ga0207639_10036415 Ga0207639_100364153 263
38 3300030521 Ga0307511_10002987 Ga0307511_1000298715 263
39 3300035117 Ga0373953_0007139 Ga0373953_0007139_820_1635 263
40 3300035119 Ga0373956_0065233 Ga0373956_0065233_437_1252 263
41 3300035172 Ga0373955_0014611 Ga0373955_0014611_1779_2594 263
42 3300035692 Ga0373935_0098455 Ga0373935_0098455_409_1224 263
43 3300035692 Ga0373935_0166849 Ga0373935_0166849_335_1210 263
44 3300035695 Ga0373927_0045665 Ga0373927_0045665_1422_2237 263
45 3300035724 Ga0373933_0176400 Ga0373933_0176400_179_994 263
46 3300036401 Ga0373937_0010504 Ga0373937_0010504_2944_3759 263
47 3300005327 Ga0070658_10037905 Ga0070658_100379053 264
48 3300005335 Ga0070666_10001084 Ga0070666_1000108422 264
49 3300005338 Ga0068868_100094420 Ga0068868_1000944201 264
50 3300005355 Ga0070671_100027462 Ga0070671_1000274623 264
51 3300005367 Ga0070667_100551877 Ga0070667_1005518771 264
52 3300005434 Ga0070709_10002313 Ga0070709_1000231310 264
53 3300005435 Ga0070714_100069602 Ga0070714_1000696022 264
54 3300005436 Ga0070713_100000044 Ga0070713_10000004481 264
55 3300005456 Ga0070678_100047352 Ga0070678_1000473524 264
56 3300005468 Ga0070707_100769862 Ga0070707_1007698621 264
57 3300005518 Ga0070699_100148982 Ga0070699_1001489822 264
58 3300005539 Ga0068853_100069305 Ga0068853_1000693052 264
59 3300005547 Ga0070693_100314121 Ga0070693_1003141211 264
60 3300005547 Ga0070693_100337790 Ga0070693_1003377901 264
61 3300005564 Ga0070664_100116061 Ga0070664_1001160612 264
62 3300005577 Ga0068857_100143257 Ga0068857_1001432573 264
63 3300005614 Ga0068856_100000406 Ga0068856_10000040656 264
64 3300005614 Ga0068856_100058638 Ga0068856_1000586385 264
65 3300005618 Ga0068864_100024034 Ga0068864_1000240346 264
66 3300005842 Ga0068858_100032976 Ga0068858_1000329764 264
67 3300006028 Ga0070717_10040094 Ga0070717_100400945 264
68 3300006173 Ga0070716_100020992 Ga0070716_1000209924 264
69 3300006175 Ga0070712_100000983 Ga0070712_10000098316 264
70 3300006358 Ga0068871_100314701 Ga0068871_1003147011 264
71 3300006871 Ga0075434_100128763 Ga0075434_1001287632 264
72 3300006914 Ga0075436_100004062 Ga0075436_1000040625 264
73 3300009093 Ga0105240_10005884 Ga0105240_100058849 264
74 3300009093 Ga0105240_10028251 Ga0105240_100282513 264
75 3300009147 Ga0114129_10124319 Ga0114129_101243193 264
76 3300009174 Ga0105241_10077469 Ga0105241_100774694 264
77 3300009177 Ga0105248_10128965 Ga0105248_101289652 264
78 3300009177 Ga0105248_10155028 Ga0105248_101550285 264
79 3300009545 Ga0105237_10247113 Ga0105237_102471132 264
80 3300009551 Ga0105238_10442157 Ga0105238_104421571 264
81 3300013104 Ga0157370_10003408 Ga0157370_100034085 264
82 3300013105 Ga0157369_10002906 Ga0157369_1000290620 264
83 3300013308 Ga0157375_10053401 Ga0157375_100534012 264
84 3300014325 Ga0163163_10025799 Ga0163163_100257996 264
85 3300014325 Ga0163163_10087079 Ga0163163_100870792 264
86 3300014968 Ga0157379_10052793 Ga0157379_100527933 264
87 3300025903 Ga0207680_10001009 Ga0207680_100010092 264
88 3300025906 Ga0207699_10001123 Ga0207699_100011234 264
89 3300025906 Ga0207699_10241759 Ga0207699_102417591 264
90 3300025909 Ga0207705_10262579 Ga0207705_102625792 264
91 3300025911 Ga0207654_10186469 Ga0207654_101864691 264
92 3300025913 Ga0207695_10001195 Ga0207695_1000119535 264
93 3300025913 Ga0207695_10061371 Ga0207695_100613713 264
94 3300025915 Ga0207693_10002137 Ga0207693_1000213713 264
95 3300025920 Ga0207649_10202645 Ga0207649_102026452 264
96 3300025922 Ga0207646_10635660 Ga0207646_106356602 264
97 3300025924 Ga0207694_10140683 Ga0207694_101406833 264
98 3300025924 Ga0207694_10248291 Ga0207694_102482912 264
99 3300025928 Ga0207700_10000017 Ga0207700_1000001767 264
100 3300025929 Ga0207664_10067831 Ga0207664_100678312 264
101 3300025931 Ga0207644_10027445 Ga0207644_100274455 264
102 3300025939 Ga0207665_10068861 Ga0207665_100688612 264
103 3300025941 Ga0207711_10027271 Ga0207711_100272714 264
104 3300025941 Ga0207711_10098381 Ga0207711_100983812 264
105 3300025945 Ga0207679_10029143 Ga0207679_100291436 264
106 3300025960 Ga0207651_10047175 Ga0207651_100471752 264
107 3300026023 Ga0207677_10291351 Ga0207677_102913512 264
108 3300026035 Ga0207703_10139989 Ga0207703_101399892 264
109 3300026078 Ga0207702_10000322 Ga0207702_1000032258 264
110 3300026078 Ga0207702_10006697 Ga0207702_100066974 264
111 3300026095 Ga0207676_10019236 Ga0207676_100192362 264
112 3300026095 Ga0207676_10436554 Ga0207676_104365541 264
113 3300026116 Ga0207674_10000003 Ga0207674_10000003258 264
114 3300026121 Ga0207683_10220701 Ga0207683_102207012 264
115 3300028800 Ga0265338_10038830 Ga0265338_100388303 264
116 3300028800 Ga0265338_10098205 Ga0265338_100982053 264
117 3300028800 Ga0265338_10337071 Ga0265338_103370712 264
118 3300031240 Ga0265320_10001992 Ga0265320_100019923 264
119 3300031241 Ga0265325_10000910 Ga0265325_100009108 264
120 3300031249 Ga0265339_10003816 Ga0265339_100038166 264
121 3300031249 Ga0265339_10011563 Ga0265339_100115636 264
122 3300031250 Ga0265331_10000011 Ga0265331_10000011175 264
123 3300031250 Ga0265331_10000506 Ga0265331_1000050630 264
124 3300031251 Ga0265327_10000007 Ga0265327_1000000721 264
125 3300031344 Ga0265316_10051238 Ga0265316_100512383 264
126 3300031344 Ga0265316_10095640 Ga0265316_100956402 264
127 3300031595 Ga0265313_10008934 Ga0265313_100089348 264
128 3300031595 Ga0265313_10046676 Ga0265313_100466762 264
129 3300031595 Ga0265313_10090871 Ga0265313_100908712 264
130 3300031711 Ga0265314_10043955 Ga0265314_100439551 264
131 3300035691 Ga0373931_0064105 Ga0373931_0064105_79_882 264
132 3300037068 Ga0373925_0122979 Ga0373925_0122979_1029_1883 264
133 3300046528 Ga0495642_0015987 Ga0495642_0015987_368_1171 264
134 3300048910 Ga0496107_0447233 Ga0496107_0447233_16_819 264
135 3300048911 Ga0496108_0082054 Ga0496108_0082054_1838_2641 264
136 3300048912 Ga0496109_0031485 Ga0496109_0031485_2636_3439 264
137 3300048915 Ga0496112_0391378 Ga0496112_0391378_86_889 264
138 3300050507 nmdc:mga05p37_172014_c1 nmdc:mga05p37_172014_c1_1453_2250 264
139 3300050512 nmdc:mga0n895_220083_c1 nmdc:mga0n895_220083_c1_385_1188 264
140 3300050514 nmdc:mga08x19_1435_c1 nmdc:mga08x19_1435_c1_6292_7095 264
141 3300005330 Ga0070690_100235519 Ga0070690_1002355192 265
142 3300005563 Ga0068855_100069675 Ga0068855_1000696752 265
143 3300006358 Ga0068871_100278350 Ga0068871_1002783502 265
144 3300031251 Ga0265327_10000280 Ga0265327_1000028019 265
145 3300039437 Ga0436365_1329269 Ga0436365_1329269_227_1036 265
146 3300047321 Ga0495676_0051236 Ga0495676_0051236_570_1397 265
147 3300049570 Ga0501033_0081881 Ga0501033_0081881_767_1573 265
148 3300049584 Ga0501068_0253931 Ga0501068_0253931_262_1068 265
149 3300049823 Ga0501044_0057119 Ga0501044_0057119_2937_3743 265
150 3300005344 Ga0070661_100000300 Ga0070661_10000030014 266
151 3300005458 Ga0070681_10511118 Ga0070681_105111181 266
152 3300006038 Ga0075365_10010607 Ga0075365_100106072 266
153 3300006178 Ga0075367_10041475 Ga0075367_100414752 266
154 3300006178 Ga0075367_10128731 Ga0075367_101287312 266
155 3300006914 Ga0075436_100237303 Ga0075436_1002373032 266
156 3300009093 Ga0105240_10477406 Ga0105240_104774062 266
157 3300025913 Ga0207695_10277158 Ga0207695_102771582 266
158 3300025920 Ga0207649_10000078 Ga0207649_1000007829 266
159 3300044694 Ga0466963_0061500 Ga0466963_0061500_735_1556 266
160 3300045836 Ga0466958_0137659 Ga0466958_0137659_488_1309 266
161 3300049569 Ga0501032_0003190 Ga0501032_0003190_9852_10655 266
162 3300049569 Ga0501032_0087292 Ga0501032_0087292_482_1291 266
163 3300049573 Ga0501037_0007780 Ga0501037_0007780_5352_6155 266
164 3300049573 Ga0501037_0134440 Ga0501037_0134440_247_1056 266
165 3300049579 Ga0501043_0162547 Ga0501043_0162547_892_1701 266
166 3300049581 Ga0501047_0068957 Ga0501047_0068957_17_826 266
167 3300049585 Ga0501069_0002125 Ga0501069_0002125_3028_3843 266
168 3300049585 Ga0501069_0126151 Ga0501069_0126151_90_899 266
169 3300049586 Ga0501070_0000325 Ga0501070_0000325_35224_36027 266
170 3300049586 Ga0501070_0011918 Ga0501070_0011918_2035_2838 266
171 3300049586 Ga0501070_0057467 Ga0501070_0057467_2386_3195 266
172 3300049586 Ga0501070_0077639 Ga0501070_0077639_147_956 266
173 3300049742 Ga0501080_0000096 Ga0501080_0000096_34882_35697 266
174 3300049742 Ga0501080_0028626 Ga0501080_0028626_2302_3111 266
175 3300049742 Ga0501080_0333089 Ga0501080_0333089_147_956 266
176 3300049744 Ga0501083_0072052 Ga0501083_0072052_452_1261 266
177 3300049823 Ga0501044_0002508 Ga0501044_0002508_15878_16681 266
178 3300009094 Ga0111539_10268912 Ga0111539_102689122 267
179 3300009094 Ga0111539_10389504 Ga0111539_103895042 267
180 3300026089 Ga0207648_10188464 Ga0207648_101884642 267
181 3300028800 Ga0265338_10006217 Ga0265338_100062178 267
182 3300031727 Ga0316576_10051126 Ga0316576_100511262 267
183 3300039437 Ga0436365_0932862 Ga0436365_0932862_2303_3145 267
184 3300048907 Ga0496104_0148247 Ga0496104_0148247_491_1306 267
185 3300048911 Ga0496108_0065651 Ga0496108_0065651_957_1790 267
186 3300048912 Ga0496109_0009712 Ga0496109_0009712_2825_3658 267
187 3300048915 Ga0496112_0013109 Ga0496112_0013109_5522_6355 267
188 3300048916 Ga0496113_0005946 Ga0496113_0005946_2299_3132 267
189 3300049571 Ga0501034_0075773 Ga0501034_0075773_930_1757 267
190 3300049580 Ga0501046_0093001 Ga0501046_0093001_1307_2119 267
191 3300050511 nmdc:mga08y16_701247_c1 nmdc:mga08y16_701247_c1_144_953 267
192 3300053078 Ga0495612_0025716 Ga0495612_0025716_776_1582 267
193 3300005546 Ga0070696_100326162 Ga0070696_1003261622 268
194 3300005844 Ga0068862_100025694 Ga0068862_1000256943 268
195 3300009177 Ga0105248_10861615 Ga0105248_108616151 268
196 3300013308 Ga0157375_10418128 Ga0157375_104181282 268
197 3300025923 Ga0207681_10594395 Ga0207681_105943951 268
198 3300025931 Ga0207644_10198466 Ga0207644_101984662 268
199 3300025972 Ga0207668_10414236 Ga0207668_104142362 268
200 3300026089 Ga0207648_10455980 Ga0207648_104559802 268
201 3300028380 Ga0268265_10150316 Ga0268265_101503163 268
202 3300031507 Ga0307509_10010349 Ga0307509_100103496 268
203 3300045976 Ga0466967_0255541 Ga0466967_0255541_73_882 268
204 3300049571 Ga0501034_0000858 Ga0501034_0000858_130_1014 268
205 3300049571 Ga0501034_0007612 Ga0501034_0007612_10030_10932 268
206 3300050512 nmdc:mga0n895_66575_c1 nmdc:mga0n895_66575_c1_1634_2449 268
207 3300050515 nmdc:mga0a205_108183_c2 nmdc:mga0a205_108183_c2_35_850 268
208 3300005471 Ga0070698_100014948 Ga0070698_1000149483 269
209 3300009098 Ga0105245_10332363 Ga0105245_103323632 269
210 3300035692 Ga0373935_0338325 Ga0373935_0338325_149_970 269
211 3300035724 Ga0373933_0028153 Ga0373933_0028153_1313_2131 269
212 3300036401 Ga0373937_0020118 Ga0373937_0020118_3474_4292 269
213 3300046675 Ga0495657_0064973 Ga0495657_0064973_724_1572 269
214 3300047322 Ga0495680_0080892 Ga0495680_0080892_421_1269 269
215 3300005456 Ga0070678_100382034 Ga0070678_1003820342 270
216 3300005548 Ga0070665_100421929 Ga0070665_1004219292 270
217 3300014968 Ga0157379_10000456 Ga0157379_1000045613 270
218 3300026121 Ga0207683_10409716 Ga0207683_104097162 270
219 3300046683 Ga0495658_0306690 Ga0495658_0306690_63_896 270
220 3300005327 Ga0070658_10018373 Ga0070658_100183736 271
221 3300005336 Ga0070680_100004092 Ga0070680_1000040929 271
222 3300005458 Ga0070681_10014799 Ga0070681_100147995 271
223 3300020069 Ga0197907_10426220 Ga0197907_104262205 271
224 3300020077 Ga0206351_10453979 Ga0206351_104539792 271
225 3300020082 Ga0206353_10009869 Ga0206353_100098696 271
226 3300022467 Ga0224712_10002997 Ga0224712_100029972 271
227 3300025909 Ga0207705_10035431 Ga0207705_100354312 271
228 3300025912 Ga0207707_10186283 Ga0207707_101862832 271
229 3300025917 Ga0207660_10020449 Ga0207660_100204492 271
230 3300025921 Ga0207652_10001817 Ga0207652_1000181718 271
231 3300028800 Ga0265338_10067488 Ga0265338_100674882 271
232 3300039437 Ga0436365_1781586 Ga0436365_1781586_24385_25242 271

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05721

PhyH

Phytanoyl-CoA dioxygenase (PhyH)

62

246

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ybm-assembly1.cif.gz_A fe(ii)/(alpha)ketoglutarate-dependent dioxygenase prha 0.8832 4 236
5ybn-assembly1.cif.gz_B fe(ii)/(alpha)ketoglutarate-dependent dioxygenase prha in complex with (alpha)ketoglutarate 0.8827 4 236
5zm4-assembly2.cif.gz_D-2 fe(ii)/(alpha)ketoglutarate-dependent dioxygenase anda with preandiloid c 0.8825 7 238
5ybm-assembly1.cif.gz_B fe(ii)/(alpha)ketoglutarate-dependent dioxygenase prha 0.8821 4 236
5ybt-assembly1.cif.gz_B fe(ii)/(alpha)ketoglutarate-dependent dioxygenase prha-v150l/a232s/m241v in complex with berkeleyone a 0.8812 4 236
ID Description Score Start End Superfamily
af_P9WI89_1_263_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.89 1 246 2.60.120.620
5y7tB00 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8719 4 236 2.60.120.620
5epaF00 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8433 9 204 2.60.120.620
af_P47181_36_316_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.8357 6 246 2.60.120.620
5zm2D00 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.834 7 256 2.60.120.620
ID Description Score Start End GO Terms
AF-A0A7K0V265-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9889 7 135 GO:0051213
AF-A0A329P665-F1-model_v4 deleted 0.9779 3 177
AF-A0A358A605-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9685 5 198 GO:0005506
GO:0016706
AF-A0A3C2B809-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9675 4 215 GO:0005506
GO:0016706
AF-A0A270QJZ4-F1-model_v4 deleted 0.9643 1 184

Feature Viewer

pLDDT pTM Quality
86.9 0.84 High
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Predicted Structure (AlphaFold2)

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