F344320

General Info

Members Datasets Scaffolds Average Seq Length
231 167 462 336

Family's Representative Sequence

Representative Sequence 3300044735|Ga0466968_0000491|Ga0466968_0000491_7563_8645
Length 360
Sequence MTADALPDMEPYRAHEGVEDSDMSPYRGTGVMALRRAREAVTPATRAFLARLDETSAAIAAYHLGWTDAAGAPTSGGGGKAIRPALATLSAQAAGAPAQVGIPGAVAVELVHNFSLVHDDVMDGDTERRHRPTVWAVWGTTSAILTGDALLALAQEVLLDSVSPHRAAAARLLAEATRHLIRGQVMDVAFERRDDVTVAECLDMASGKTGALLSASAAIGAVLAGAPDHVVDALATFGAQLGIAFQLVDDLLGIWGDPAITGKPVFSDLRSRKKTLPVTYALSQGGAAGRELAGWLRDSTSDGEAHAADLIEAAGGRQWATTEAQRRIAAAEQALSGVPIPAGPRAELAAIAHFIVERET

Samples

Sample ID Description Type Environment
1 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
100 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
103 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
104 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
105 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
109 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
110 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
116 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
117 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
118 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
119 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
120 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
121 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
126 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
127 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
128 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
129 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
132 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
133 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
134 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
142 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
143 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
144 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
145 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
155 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
156 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
157 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
158 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
159 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 2547132424 Nocardia nova SH22a Isolate Unclassified
162 2734482000 Kineosporia rhizophila JCM 9960 Isolate Unclassified
163 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
164 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
165 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
166 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
167 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.94
Metatranscriptomes 3.03
Isolates 3.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.87
Nodule 0
Rhizoplane 6.93
Rhizosphere 84.42
Stem 0
Stem Tuber 0.43
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466968_0000491 3300044735 Bacteria 13378
2 Ga0070658_10004900 3300005327 Bacteria 10909
3 Ga0070658_10022793 3300005327 Bacteria 5025
4 Ga0070658_10054197 3300005327 Bacteria 3256
5 Ga0070658_10096737 3300005327 Bacteria 2438
6 Ga0070658_10241599 3300005327 Bacteria 1531
7 Ga0070690_100011770 3300005330 Bacteria 5129
8 Ga0070670_100166467 3300005331 Bacteria 1911
9 Ga0068869_100002216 3300005334 Bacteria 11697
10 Ga0070666_10150602 3300005335 Bacteria 1623
11 Ga0070680_100005131 3300005336 Bacteria 9893
12 Ga0070680_100277593 3300005336 Bacteria 1419
13 Ga0070660_100221275 3300005339 Bacteria 1539
14 Ga0070689_100074840 3300005340 Bacteria 2650
15 Ga0070659_100000331 3300005366 Bacteria 36451
16 Ga0070659_100009988 3300005366 Bacteria 6982
17 Ga0070678_100029289 3300005456 Bacteria 3768
18 Ga0070681_10000025 3300005458 Bacteria 110322
19 Ga0070681_10027151 3300005458 Bacteria 5756
20 Ga0070681_10068641 3300005458 Bacteria 3511
21 Ga0070681_10125862 3300005458 Bacteria 2495
22 Ga0070679_100000071 3300005530 Bacteria 76030
23 Ga0070679_100001761 3300005530 Bacteria 19505
24 Ga0070679_100026730 3300005530 Bacteria 5674
25 Ga0070679_100027330 3300005530 Bacteria 5615
26 Ga0070679_100029675 3300005530 Bacteria 5394
27 Ga0070672_100062378 3300005543 Bacteria 2941
28 Ga0070693_100001729 3300005547 Bacteria 9934
29 Ga0070665_100050062 3300005548 Bacteria 4192
30 Ga0068855_100091475 3300005563 Bacteria 3509
31 Ga0070664_100227605 3300005564 Bacteria 1670
32 Ga0070702_100000876 3300005615 Bacteria 11677
33 Ga0068852_100322614 3300005616 Bacteria 1500
34 Ga0068859_100027282 3300005617 Bacteria 5729
35 Ga0068864_100276528 3300005618 Bacteria 1566
36 Ga0068851_10101320 3300005834 Bacteria 1528
37 Ga0068870_10001662 3300005840 Bacteria 9095
38 Ga0068863_100002455 3300005841 Bacteria 18421
39 Ga0068863_100074450 3300005841 Bacteria 3212
40 Ga0081455_10000297 3300005937 Bacteria 65930
41 Ga0081455_10004770 3300005937 Bacteria 15061
42 Ga0081540_1002423 3300005983 Bacteria 15199
43 Ga0081539_10005800 3300005985 Bacteria 12286
44 Ga0097621_100028402 3300006237 Bacteria 4409
45 Ga0075431_100109266 3300006847 Bacteria 2855
46 Ga0075433_10068545 3300006852 Bacteria 3115
47 Ga0075434_100003636 3300006871 Bacteria 13771
48 Ga0075436_100012582 3300006914 Bacteria 5799
49 Ga0097620_100027282 3300006931 Bacteria 5729
50 Ga0075435_100005953 3300007076 Bacteria 8579
51 Ga0105240_10026308 3300009093 Bacteria 7634
52 Ga0105240_10040032 3300009093 Bacteria 6000
53 Ga0111539_10034954 3300009094 Bacteria 6087
54 Ga0114129_10265504 3300009147 Bacteria 2298
55 Ga0105241_10025022 3300009174 Bacteria 4436
56 Ga0105237_10066350 3300009545 Bacteria 3604
57 Ga0105238_10104169 3300009551 Bacteria 2818
58 Ga0105239_10013720 3300010375 Bacteria 8996
59 Ga0105239_10228042 3300010375 Bacteria 2090
60 Ga0105246_10002326 3300011119 Bacteria 11485
61 Ga0157373_10104809 3300013100 Bacteria 1989
62 Ga0157371_10072767 3300013102 Bacteria 2434
63 Ga0157369_10001126 3300013105 Bacteria 33440
64 Ga0157369_10012481 3300013105 Bacteria 9639
65 Ga0157369_10045069 3300013105 Bacteria 4798
66 Ga0157369_10060730 3300013105 Bacteria 4076
67 Ga0157369_10112172 3300013105 Bacteria 2897
68 Ga0157369_10130598 3300013105 Bacteria 2662
69 Ga0157374_10041302 3300013296 Bacteria 4250
70 Ga0182008_10051564 3300014497 Bacteria 2040
71 Ga0157379_10001608 3300014968 Bacteria 18631
72 Ga0157379_10052827 3300014968 Bacteria 3629
73 Ga0157376_10129354 3300014969 Bacteria 2251
74 Ga0197907_10233458 3300020069 Bacteria 2645
75 Ga0206356_11864742 3300020070 Bacteria 3559
76 Ga0206349_1760086 3300020075 Bacteria 5694
77 Ga0206354_10117946 3300020081 Bacteria 4685
78 Ga0206353_11351647 3300020082 Bacteria 1534
79 Ga0206353_11870898 3300020082 Bacteria 2643
80 Ga0213873_10000054 3300021358 Bacteria 25574
81 Ga0213876_10028594 3300021384 Bacteria 2939
82 Ga0213875_10000352 3300021388 Bacteria 43112
83 Ga0213875_10046379 3300021388 Bacteria 2039
84 Ga0224712_10000395 3300022467 Bacteria 8535
85 Ga0207656_10087251 3300025321 Bacteria 1411
86 Ga0207688_10009352 3300025901 Bacteria 5342
87 Ga0207645_10021720 3300025907 Bacteria 4182
88 Ga0207643_10000130 3300025908 Bacteria 50988
89 Ga0207705_10001134 3300025909 Bacteria 21687
90 Ga0207705_10007856 3300025909 Bacteria 7834
91 Ga0207705_10024086 3300025909 Bacteria 4344
92 Ga0207705_10080265 3300025909 Bacteria 2377
93 Ga0207707_10000023 3300025912 Bacteria 183706
94 Ga0207707_10019355 3300025912 Bacteria 5942
95 Ga0207707_10027524 3300025912 Bacteria 4971
96 Ga0207707_10077992 3300025912 Bacteria 2892
97 Ga0207695_10057434 3300025913 Bacteria 4042
98 Ga0207695_10064825 3300025913 Bacteria 3759
99 Ga0207671_10069691 3300025914 Bacteria 2621
100 Ga0207660_10001619 3300025917 Bacteria 15103
101 Ga0207660_10034835 3300025917 Bacteria 3492
102 Ga0207660_10058156 3300025917 Bacteria 2771
103 Ga0207657_10006474 3300025919 Bacteria 12134
104 Ga0207657_10027975 3300025919 Bacteria 5152
105 Ga0207649_10006539 3300025920 Bacteria 6330
106 Ga0207652_10000039 3300025921 Bacteria 131660
107 Ga0207652_10004488 3300025921 Bacteria 11345
108 Ga0207652_10048920 3300025921 Bacteria 3616
109 Ga0207652_10112087 3300025921 Bacteria 2420
110 Ga0207652_10172625 3300025921 Bacteria 1940
111 Ga0207694_10140752 3300025924 Bacteria 1940
112 Ga0207650_10001965 3300025925 Bacteria 14426
113 Ga0207659_10008179 3300025926 Bacteria 6480
114 Ga0207687_10079445 3300025927 Bacteria 2365
115 Ga0207700_10049884 3300025928 Bacteria 3116
116 Ga0207690_10000346 3300025932 Bacteria 30899
117 Ga0207690_10011071 3300025932 Bacteria 5380
118 Ga0207690_10015931 3300025932 Bacteria 4566
119 Ga0207706_10088803 3300025933 Bacteria 2717
120 Ga0207691_10022202 3300025940 Bacteria 5987
121 Ga0207689_10002742 3300025942 Bacteria 16289
122 Ga0207661_10056539 3300025944 Bacteria 3150
123 Ga0207661_10064538 3300025944 Bacteria 2968
124 Ga0207679_10000888 3300025945 Bacteria 19059
125 Ga0207679_10092740 3300025945 Bacteria 2340
126 Ga0207667_10235217 3300025949 Bacteria 1875
127 Ga0207651_10040648 3300025960 Bacteria 3079
128 Ga0207712_10065450 3300025961 Bacteria 2594
129 Ga0207668_10176656 3300025972 Bacteria 1680
130 Ga0207677_10007888 3300026023 Bacteria 5918
131 Ga0207703_10277586 3300026035 Bacteria 1520
132 Ga0207678_10010070 3300026067 Bacteria 8294
133 Ga0207708_10003304 3300026075 Bacteria 11870
134 Ga0207702_10004754 3300026078 Bacteria 11987
135 Ga0207702_10019208 3300026078 Bacteria 5652
136 Ga0207641_10004790 3300026088 Bacteria 11664
137 Ga0207641_10073346 3300026088 Bacteria 2950
138 Ga0207648_10050758 3300026089 Bacteria 3626
139 Ga0207676_10001179 3300026095 Bacteria 19617
140 Ga0207683_10005559 3300026121 Bacteria 10800
141 Ga0207698_10057479 3300026142 Bacteria 3010
142 Ga0207428_10006020 3300027907 Bacteria 11221
143 Ga0268266_10015046 3300028379 Bacteria 6642
144 Ga0265325_10020143 3300031241 Bacteria 3679
145 Ga0265340_10010114 3300031247 Bacteria 5054
146 Ga0265340_10015616 3300031247 Bacteria 3943
147 Ga0265339_10049658 3300031249 Bacteria 2296
148 Ga0265316_10176301 3300031344 Bacteria 1593
149 Ga0373953_0017879 3300035117 Bacteria 2614
150 Ga0373946_0031976 3300035171 Bacteria 2111
151 Ga0373955_0164440 3300035172 Bacteria 1311
152 Ga0373947_0193569 3300035725 Bacteria 1328
153 Ga0373937_0063153 3300036401 Bacteria 3406
154 Ga0395899_0002315 3300037312 Bacteria 15526
155 Ga0395899_0023859 3300037312 Bacteria 4628
156 Ga0395900_0005367 3300037418 Bacteria 13432
157 Ga0395898_0006096 3300037466 Bacteria 12936
158 Ga0395898_0024344 3300037466 Bacteria 6106
159 Ga0395898_0215738 3300037466 Bacteria 1830
160 Ga0395898_0232136 3300037466 Bacteria 1760
161 Ga0395905_0002577 3300037471 Bacteria 19967
162 Ga0436364_0971903 3300037853 Bacteria 128436
163 Ga0395901_0012498 3300038443 Bacteria 8615
164 Ga0436365_1192368 3300039437 Bacteria 3923
165 Ga0436362_0530843 3300039453 Bacteria 30315
166 Ga0439458_0013161 3300042157 Bacteria 1862
167 Ga0466965_0028497 3300044683 Bacteria 2714
168 Ga0466961_0037156 3300044693 Bacteria 3125
169 Ga0466961_0143684 3300044693 Bacteria 1493
170 Ga0466963_0023459 3300044694 Bacteria 3919
171 Ga0466963_0123606 3300044694 Bacteria 1783
172 Ga0466963_0178095 3300044694 Bacteria 1484
173 Ga0466971_0001116 3300044719 Bacteria 11143
174 Ga0466971_0114776 3300044719 Bacteria 1244
175 Ga0466970_0002072 3300044765 Bacteria 9702
176 Ga0466970_0020821 3300044765 Bacteria 3412
177 Ga0466957_0002483 3300044842 Bacteria 9907
178 Ga0466957_0048031 3300044842 Bacteria 2594
179 Ga0466960_0001249 3300044901 Bacteria 9205
180 Ga0466959_0072320 3300045049 Bacteria 2496
181 Ga0466958_0030652 3300045836 Bacteria 3196
182 Ga0466967_0052034 3300045976 Bacteria 3592
183 Ga0466967_0071091 3300045976 Bacteria 3115
184 Ga0466967_0121306 3300045976 Bacteria 2416
185 Ga0466967_0155290 3300045976 Bacteria 2143
186 Ga0495607_0014776 3300046501 Bacteria 5075
187 Ga0495683_0001135 3300047323 Bacteria 18346
188 Ga0496100_0006048 3300048903 Bacteria 6572
189 Ga0496101_0043138 3300048904 Bacteria 3222
190 Ga0496101_0531954 3300048904 Bacteria 929
191 Ga0496102_0000157 3300048905 Bacteria 92353
192 Ga0496102_0012463 3300048905 Bacteria 7359
193 Ga0496103_0000106 3300048906 Bacteria 92315
194 Ga0496104_0022821 3300048907 Bacteria 5749
195 Ga0496104_0114350 3300048907 Bacteria 2588
196 Ga0496105_0120842 3300048908 Bacteria 2160
197 Ga0496108_0003610 3300048911 Bacteria 12389
198 Ga0496108_0198739 3300048911 Bacteria 1740
199 Ga0496110_0105606 3300048913 Bacteria 2527
200 Ga0496111_0033208 3300048914 Bacteria 3679
201 Ga0496112_0198813 3300048915 Bacteria 1964
202 Ga0496114_0343953 3300048917 Bacteria 1319
203 Ga0496115_0135198 3300048918 Bacteria 2033
204 Ga0496116_0000724 3300048919 Bacteria 42184
205 Ga0496117_0000364 3300048920 Bacteria 78857
206 Ga0496118_0000069 3300048921 Bacteria 203439
207 Ga0496119_0001883 3300048922 Bacteria 24189
208 Ga0496120_0003284 3300048923 Bacteria 14904
209 Ga0496121_0019278 3300048924 Bacteria 6828
210 Ga0496124_0026412 3300048927 Bacteria 5235
211 Ga0496126_0000086 3300048929 Bacteria 215914
212 Ga0496126_0000372 3300048929 Bacteria 92561
213 Ga0501038_0358589 3300049574 Bacteria 1134
214 Ga0501047_0030294 3300049581 Bacteria 5217
215 Ga0501035_0003032 3300049822 Bacteria 16101
216 Ga0501044_0038715 3300049823 Bacteria 4979
217 nmdc:mga08y16_178337_c1 3300050511 Bacteria 2207
218 nmdc:mga0n895_3909_c1 3300050512 Bacteria 12106
219 nmdc:mga08x19_17794_c1 3300050514 Bacteria 4351
220 nmdc:mga0a205_19786_c1 3300050515 Bacteria 6352
221 Ga0495619_0057505 3300053085 Bacteria 2581
222 Ga0500643_000433 3300053087 Bacteria 31562
223 Ga0500616_0000287 3300053153 Bacteria 73549
224 Ga0466962_0014790 3300061719 Bacteria 3760
225 2548697819 2547132424 Bacteria 8348532
226 2734970594 2734482000 Bacteria 5525167
227 2873153503 2873151551 Bacteria 8625867
228 2899372874 2899370129 Bacteria 6781179
229 2917743145 2917736166 Bacteria 9690793
230 2919715994 2919713450 Bacteria 7431245
231 8054474687 8054472261 Bacteria 7464355
232 Ga0466968_0000491
233 Ga0070658_10004900
234 Ga0070658_10022793
235 Ga0070658_10054197
236 Ga0070658_10096737
237 Ga0070658_10241599
238 Ga0070690_100011770
239 Ga0070670_100166467
240 Ga0068869_100002216
241 Ga0070666_10150602
242 Ga0070680_100005131
243 Ga0070680_100277593
244 Ga0070660_100221275
245 Ga0070689_100074840
246 Ga0070659_100000331
247 Ga0070659_100009988
248 Ga0070678_100029289
249 Ga0070681_10000025
250 Ga0070681_10027151
251 Ga0070681_10068641
252 Ga0070681_10125862
253 Ga0070679_100000071
254 Ga0070679_100001761
255 Ga0070679_100026730
256 Ga0070679_100027330
257 Ga0070679_100029675
258 Ga0070672_100062378
259 Ga0070693_100001729
260 Ga0070665_100050062
261 Ga0068855_100091475
262 Ga0070664_100227605
263 Ga0070702_100000876
264 Ga0068852_100322614
265 Ga0068859_100027282
266 Ga0068864_100276528
267 Ga0068851_10101320
268 Ga0068870_10001662
269 Ga0068863_100002455
270 Ga0068863_100074450
271 Ga0081455_10000297
272 Ga0081455_10004770
273 Ga0081540_1002423
274 Ga0081539_10005800
275 Ga0097621_100028402
276 Ga0075431_100109266
277 Ga0075433_10068545
278 Ga0075434_100003636
279 Ga0075436_100012582
280 Ga0097620_100027282
281 Ga0075435_100005953
282 Ga0105240_10026308
283 Ga0105240_10040032
284 Ga0111539_10034954
285 Ga0114129_10265504
286 Ga0105241_10025022
287 Ga0105237_10066350
288 Ga0105238_10104169
289 Ga0105239_10013720
290 Ga0105239_10228042
291 Ga0105246_10002326
292 Ga0157373_10104809
293 Ga0157371_10072767
294 Ga0157369_10001126
295 Ga0157369_10012481
296 Ga0157369_10045069
297 Ga0157369_10060730
298 Ga0157369_10112172
299 Ga0157369_10130598
300 Ga0157374_10041302
301 Ga0182008_10051564
302 Ga0157379_10001608
303 Ga0157379_10052827
304 Ga0157376_10129354
305 Ga0197907_10233458
306 Ga0206356_11864742
307 Ga0206349_1760086
308 Ga0206354_10117946
309 Ga0206353_11351647
310 Ga0206353_11870898
311 Ga0213873_10000054
312 Ga0213876_10028594
313 Ga0213875_10000352
314 Ga0213875_10046379
315 Ga0224712_10000395
316 Ga0207656_10087251
317 Ga0207688_10009352
318 Ga0207645_10021720
319 Ga0207643_10000130
320 Ga0207705_10001134
321 Ga0207705_10007856
322 Ga0207705_10024086
323 Ga0207705_10080265
324 Ga0207707_10000023
325 Ga0207707_10019355
326 Ga0207707_10027524
327 Ga0207707_10077992
328 Ga0207695_10057434
329 Ga0207695_10064825
330 Ga0207671_10069691
331 Ga0207660_10001619
332 Ga0207660_10034835
333 Ga0207660_10058156
334 Ga0207657_10006474
335 Ga0207657_10027975
336 Ga0207649_10006539
337 Ga0207652_10000039
338 Ga0207652_10004488
339 Ga0207652_10048920
340 Ga0207652_10112087
341 Ga0207652_10172625
342 Ga0207694_10140752
343 Ga0207650_10001965
344 Ga0207659_10008179
345 Ga0207687_10079445
346 Ga0207700_10049884
347 Ga0207690_10000346
348 Ga0207690_10011071
349 Ga0207690_10015931
350 Ga0207706_10088803
351 Ga0207691_10022202
352 Ga0207689_10002742
353 Ga0207661_10056539
354 Ga0207661_10064538
355 Ga0207679_10000888
356 Ga0207679_10092740
357 Ga0207667_10235217
358 Ga0207651_10040648
359 Ga0207712_10065450
360 Ga0207668_10176656
361 Ga0207677_10007888
362 Ga0207703_10277586
363 Ga0207678_10010070
364 Ga0207708_10003304
365 Ga0207702_10004754
366 Ga0207702_10019208
367 Ga0207641_10004790
368 Ga0207641_10073346
369 Ga0207648_10050758
370 Ga0207676_10001179
371 Ga0207683_10005559
372 Ga0207698_10057479
373 Ga0207428_10006020
374 Ga0268266_10015046
375 Ga0265325_10020143
376 Ga0265340_10010114
377 Ga0265340_10015616
378 Ga0265339_10049658
379 Ga0265316_10176301
380 Ga0373953_0017879
381 Ga0373946_0031976
382 Ga0373955_0164440
383 Ga0373947_0193569
384 Ga0373937_0063153
385 Ga0395899_0002315
386 Ga0395899_0023859
387 Ga0395900_0005367
388 Ga0395898_0006096
389 Ga0395898_0024344
390 Ga0395898_0215738
391 Ga0395898_0232136
392 Ga0395905_0002577
393 Ga0436364_0971903
394 Ga0395901_0012498
395 Ga0436365_1192368
396 Ga0436362_0530843
397 Ga0439458_0013161
398 Ga0466965_0028497
399 Ga0466961_0037156
400 Ga0466961_0143684
401 Ga0466963_0023459
402 Ga0466963_0123606
403 Ga0466963_0178095
404 Ga0466971_0001116
405 Ga0466971_0114776
406 Ga0466970_0002072
407 Ga0466970_0020821
408 Ga0466957_0002483
409 Ga0466957_0048031
410 Ga0466960_0001249
411 Ga0466959_0072320
412 Ga0466958_0030652
413 Ga0466967_0052034
414 Ga0466967_0071091
415 Ga0466967_0121306
416 Ga0466967_0155290
417 Ga0495607_0014776
418 Ga0495683_0001135
419 Ga0496100_0006048
420 Ga0496101_0043138
421 Ga0496101_0531954
422 Ga0496102_0000157
423 Ga0496102_0012463
424 Ga0496103_0000106
425 Ga0496104_0022821
426 Ga0496104_0114350
427 Ga0496105_0120842
428 Ga0496108_0003610
429 Ga0496108_0198739
430 Ga0496110_0105606
431 Ga0496111_0033208
432 Ga0496112_0198813
433 Ga0496114_0343953
434 Ga0496115_0135198
435 Ga0496116_0000724
436 Ga0496117_0000364
437 Ga0496118_0000069
438 Ga0496119_0001883
439 Ga0496120_0003284
440 Ga0496121_0019278
441 Ga0496124_0026412
442 Ga0496126_0000086
443 Ga0496126_0000372
444 Ga0501038_0358589
445 Ga0501047_0030294
446 Ga0501035_0003032
447 Ga0501044_0038715
448 nmdc:mga08y16_178337_c1
449 nmdc:mga0n895_3909_c1
450 nmdc:mga08x19_17794_c1
451 nmdc:mga0a205_19786_c1
452 Ga0495619_0057505
453 Ga0500643_000433
454 Ga0500616_0000287
455 Ga0466962_0014790
456 2548697819
457 2734970594
458 2873153503
459 2899372874
460 2917743145
461 2919715994
462 8054474687

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00348

polyprenyl_synt

Polyprenyl synthetase

66

313

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nf2-assembly1.cif.gz_A-2 crystal structure of polyprenyl synthetase from streptomyces coelicolor a3(2) 0.9044 7 307
7my7-assembly2.cif.gz_CCC se-crte n-term his-tag structure 0.8812 7 221
3nf2-assembly1.cif.gz_A-2 crystal structure of polyprenyl synthetase from streptomyces coelicolor a3(2) 0.8735 7 307
7my7-assembly2.cif.gz_CCC se-crte n-term his-tag structure 0.8616 7 221
2azk-assembly1.cif.gz_A crystal structure for the mutant w136e of sulfolobus solfataricus hexaprenyl pyrophosphate synthase 0.8465 7 308
ID Description Score Start End Superfamily
3nf2A00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9044 7 307 1.10.600.10
af_P9WKH1_23_358_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8783 4 310 1.10.600.10
3nf2A00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8735 7 307 1.10.600.10
af_P9WKH1_23_358_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8648 4 310 1.10.600.10
af_O50410_18_349_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8517 7 310 1.10.600.10
ID Description Score Start End GO Terms
AF-A0A0F4JPT7-F1-model_v4 deleted 0.9857 5 198
AF-A0A6G3SGG5-F1-model_v4 Polyprenyl synthetase family protein 0.9815 7 226 GO:0004659
GO:0008299
AF-A0A7W3T8T0-F1-model_v4 Polyprenyl synthetase family protein 0.9812 7 166 GO:0004311
GO:0008299
AF-A0A351M1L4-F1-model_v4 Dimethylallyltranstransferase 0.9801 3 222 GO:0004659
GO:0008299
AF-A0A351M1L4-F1-model_v4 Dimethylallyltranstransferase 0.9714 3 222 GO:0004659
GO:0008299

Map