F344110
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 231 | 171 | 462 | 620 |
Family's Representative Sequence
| Representative Sequence | 3300025915|Ga0207693_10010944|Ga0207693_100109444 |
| Length | 652 |
| Sequence | VVGLIQILGHILAQEGSEPAAAIAQTAPNWFVQHAFLIPLFCFASAALTLFFGKRTPGKGPVYGILALSAGLIMALGVIWGVAHNGVPYEHDINWFTIGTLQIQLGYFIDGLTGVMLLVVTSISLMVHIYSLGYMHGDKRYTWFYVVLSMFTGAMLVVVLASNLFQLLVGWEIMGVCSYLLIGHWYEDHANSSAAIKAFLTTRVGDVPFMFGIFALIYATGMTTSNIQVISKTVAGGNVSVLLVTCAALLMFGGTIGKSAQFPLYTWLPDAMAGPTPVSALIHAATMVAAGIYLVARTFEVFVHADPIALTIVSIIGGITLMLAALLALVQDDIKKVLAYSTISQLAYMVAALGLGEAGYPAAMFHLFTHAFFKALLFLGAGSVIHAAHSNNMSDMGGLRKHMKWTYWTFLIGSLALAGVPPFSGFFSKDEIILAAKDQHIYWLMATLLIGAVITAFYTTRMFLKTFHGEYRGTEHLHESPRSMTAPLVVLAITTCFVGLLGFAPVGAPFLDWVYFGAPEPAVFSPLVALISVVAVAIGIYSGWVMYRTYREKDPTLEMGGFSTLLVHKYYLDDIYFGGIVRPIRDTWSAGIYWFNQNVLDGVVNGAAVVAGAGNAMETFGKGLRLVQSGKVQWYAVGLFAGVIALSLFIFR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300002459 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 | Metagenome | Rhizosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 7 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Metagenome | Rhizosphere |
| 11 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 12 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 15 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 16 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 21 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 27 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 29 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 30 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 31 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 32 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 33 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 34 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 36 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 37 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 38 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 39 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 40 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 41 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 73 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 75 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 76 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 77 | 3300035089 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 | Metagenome | Rhizosphere |
| 78 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 79 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 80 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 81 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 82 | 3300035121 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 | Metagenome | Rhizosphere |
| 83 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 84 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 85 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 86 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 87 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 88 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 89 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 90 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 91 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 92 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 93 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 94 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 95 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 96 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 120 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 121 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 122 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 123 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 124 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 125 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 141 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 146 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 148 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 149 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 150 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 151 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 152 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 153 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 154 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 155 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 156 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 157 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 158 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 159 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 160 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 161 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 162 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 163 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 164 | 2858868258 | Micromonospora sp. MH33 | Isolate | Unclassified |
| 165 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 166 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 167 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 168 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 169 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 170 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 171 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.51 |
| Metatranscriptomes | 0 |
| Isolates | 6.49 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.87 |
| Nodule | 0.43 |
| Rhizoplane | 2.6 |
| Rhizosphere | 89.61 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207693_10010944 | 3300025915 | Bacteria | 7350 |
| 2 | JGI24751J29686_10000376 | 3300002459 | Bacteria | 15131 |
| 3 | Ga0070658_10005499 | 3300005327 | Bacteria | 10285 |
| 4 | Ga0070658_10012726 | 3300005327 | Bacteria | 6748 |
| 5 | Ga0070683_100028706 | 3300005329 | Bacteria | 5030 |
| 6 | Ga0070683_100050482 | 3300005329 | Bacteria | 3851 |
| 7 | Ga0070683_100139922 | 3300005329 | Bacteria | 2293 |
| 8 | Ga0070670_100008204 | 3300005331 | Bacteria | 8891 |
| 9 | Ga0070670_100038554 | 3300005331 | Bacteria | 4109 |
| 10 | Ga0070680_100002601 | 3300005336 | Bacteria | 13369 |
| 11 | Ga0070661_100021836 | 3300005344 | Bacteria | 4578 |
| 12 | Ga0070675_100033554 | 3300005354 | Bacteria | 4163 |
| 13 | Ga0070675_100085230 | 3300005354 | Bacteria | 2639 |
| 14 | Ga0070674_100028268 | 3300005356 | Bacteria | 3682 |
| 15 | Ga0070703_10000342 | 3300005406 | Bacteria | 20506 |
| 16 | Ga0070703_10001976 | 3300005406 | Bacteria | 6006 |
| 17 | Ga0070694_100005762 | 3300005444 | Bacteria | 7515 |
| 18 | Ga0070708_100000214 | 3300005445 | Bacteria | 43022 |
| 19 | Ga0070663_100049177 | 3300005455 | Bacteria | 2993 |
| 20 | Ga0070681_10000077 | 3300005458 | Bacteria | 72675 |
| 21 | Ga0070681_10033628 | 3300005458 | Bacteria | 5147 |
| 22 | Ga0070681_10091482 | 3300005458 | Bacteria | 2992 |
| 23 | Ga0068867_100030135 | 3300005459 | Bacteria | 3913 |
| 24 | Ga0070706_100014570 | 3300005467 | Bacteria | 7265 |
| 25 | Ga0070707_100003752 | 3300005468 | Bacteria | 14332 |
| 26 | Ga0070698_100016211 | 3300005471 | Bacteria | 7867 |
| 27 | Ga0070698_100088988 | 3300005471 | Bacteria | 3071 |
| 28 | Ga0070679_100000135 | 3300005530 | Bacteria | 59584 |
| 29 | Ga0070679_100011142 | 3300005530 | Bacteria | 8563 |
| 30 | Ga0070679_100098457 | 3300005530 | Bacteria | 2912 |
| 31 | Ga0070684_100006110 | 3300005535 | Bacteria | 9280 |
| 32 | Ga0070684_100146418 | 3300005535 | Bacteria | 2138 |
| 33 | Ga0070697_100007840 | 3300005536 | Bacteria | 8314 |
| 34 | Ga0070672_100070104 | 3300005543 | Bacteria | 2785 |
| 35 | Ga0070665_100148615 | 3300005548 | Bacteria | 2346 |
| 36 | Ga0070704_100002147 | 3300005549 | Bacteria | 10990 |
| 37 | Ga0070704_100016454 | 3300005549 | Bacteria | 4673 |
| 38 | Ga0070664_100001488 | 3300005564 | Bacteria | 18656 |
| 39 | Ga0070664_100029794 | 3300005564 | Bacteria | 4551 |
| 40 | Ga0068857_100040191 | 3300005577 | Bacteria | 4147 |
| 41 | Ga0070702_100012708 | 3300005615 | Bacteria | 4231 |
| 42 | Ga0070702_100047254 | 3300005615 | Bacteria | 2444 |
| 43 | Ga0068864_100062352 | 3300005618 | Bacteria | 3230 |
| 44 | Ga0068864_100062968 | 3300005618 | Bacteria | 3214 |
| 45 | Ga0068866_10000781 | 3300005718 | Bacteria | 14252 |
| 46 | Ga0068861_100048479 | 3300005719 | Bacteria | 3211 |
| 47 | Ga0081455_10001472 | 3300005937 | Bacteria | 29145 |
| 48 | Ga0081455_10004768 | 3300005937 | Bacteria | 15063 |
| 49 | Ga0081455_10007412 | 3300005937 | Bacteria | 11557 |
| 50 | Ga0081539_10003151 | 3300005985 | Bacteria | 20932 |
| 51 | Ga0081539_10003713 | 3300005985 | Bacteria | 18191 |
| 52 | Ga0081539_10012144 | 3300005985 | Bacteria | 6688 |
| 53 | Ga0081539_10017136 | 3300005985 | Bacteria | 5107 |
| 54 | Ga0075364_10000776 | 3300006051 | Bacteria | 16780 |
| 55 | Ga0070715_10002703 | 3300006163 | Bacteria | 5499 |
| 56 | Ga0070712_100016652 | 3300006175 | Bacteria | 4750 |
| 57 | Ga0075430_100001351 | 3300006846 | Bacteria | 19841 |
| 58 | Ga0075430_100008087 | 3300006846 | Bacteria | 8889 |
| 59 | Ga0075430_100015841 | 3300006846 | Bacteria | 6421 |
| 60 | Ga0075431_100001552 | 3300006847 | Bacteria | 21308 |
| 61 | Ga0075433_10003118 | 3300006852 | Bacteria | 12765 |
| 62 | Ga0075434_100001343 | 3300006871 | Bacteria | 20628 |
| 63 | Ga0075429_100005358 | 3300006880 | Bacteria | 11035 |
| 64 | Ga0114129_10043560 | 3300009147 | Bacteria | 6314 |
| 65 | Ga0105243_10005541 | 3300009148 | Bacteria | 9835 |
| 66 | Ga0105242_10005500 | 3300009176 | Bacteria | 9781 |
| 67 | Ga0105242_10009695 | 3300009176 | Bacteria | 7381 |
| 68 | Ga0105242_10018087 | 3300009176 | Bacteria | 5505 |
| 69 | Ga0157369_10002377 | 3300013105 | Bacteria | 22613 |
| 70 | Ga0157378_10014936 | 3300013297 | Bacteria | 6797 |
| 71 | Ga0157372_10045355 | 3300013307 | Bacteria | 4876 |
| 72 | Ga0157372_10177074 | 3300013307 | Bacteria | 2469 |
| 73 | Ga0157375_10009139 | 3300013308 | Bacteria | 8684 |
| 74 | Ga0157375_10044320 | 3300013308 | Bacteria | 4321 |
| 75 | Ga0163163_10010836 | 3300014325 | Bacteria | 8233 |
| 76 | Ga0157380_10039394 | 3300014326 | Bacteria | 3675 |
| 77 | Ga0157377_10028286 | 3300014745 | Bacteria | 3016 |
| 78 | Ga0207653_10000233 | 3300025885 | Bacteria | 36792 |
| 79 | Ga0207653_10002423 | 3300025885 | Bacteria | 5932 |
| 80 | Ga0207645_10015952 | 3300025907 | Bacteria | 4977 |
| 81 | Ga0207643_10000118 | 3300025908 | Bacteria | 53785 |
| 82 | Ga0207643_10042695 | 3300025908 | Bacteria | 2557 |
| 83 | Ga0207705_10012320 | 3300025909 | Bacteria | 6177 |
| 84 | Ga0207684_10000233 | 3300025910 | Bacteria | 84435 |
| 85 | Ga0207707_10000089 | 3300025912 | Bacteria | 90919 |
| 86 | Ga0207707_10013831 | 3300025912 | Bacteria | 7037 |
| 87 | Ga0207660_10000091 | 3300025917 | Bacteria | 49157 |
| 88 | Ga0207652_10000015 | 3300025921 | Bacteria | 193042 |
| 89 | Ga0207652_10070799 | 3300025921 | Bacteria | 3029 |
| 90 | Ga0207646_10007965 | 3300025922 | Bacteria | 10687 |
| 91 | Ga0207646_10080025 | 3300025922 | Bacteria | 2921 |
| 92 | Ga0207650_10004288 | 3300025925 | Bacteria | 9734 |
| 93 | Ga0207650_10016046 | 3300025925 | Bacteria | 5227 |
| 94 | Ga0207659_10093583 | 3300025926 | Bacteria | 2249 |
| 95 | Ga0207709_10006170 | 3300025935 | Bacteria | 6750 |
| 96 | Ga0207709_10035052 | 3300025935 | Bacteria | 2964 |
| 97 | Ga0207669_10021282 | 3300025937 | Bacteria | 3421 |
| 98 | Ga0207661_10015691 | 3300025944 | Bacteria | 5581 |
| 99 | Ga0207661_10038081 | 3300025944 | Bacteria | 3767 |
| 100 | Ga0207678_10016760 | 3300026067 | Bacteria | 6435 |
| 101 | Ga0207708_10005403 | 3300026075 | Bacteria | 9414 |
| 102 | Ga0207708_10057832 | 3300026075 | Bacteria | 2958 |
| 103 | Ga0207648_10036407 | 3300026089 | Bacteria | 4336 |
| 104 | Ga0207676_10003891 | 3300026095 | Bacteria | 10547 |
| 105 | Ga0207674_10023622 | 3300026116 | Bacteria | 6582 |
| 106 | Ga0207674_10108681 | 3300026116 | Bacteria | 2750 |
| 107 | Ga0207675_100025079 | 3300026118 | Bacteria | 5549 |
| 108 | Ga0207683_10022665 | 3300026121 | Bacteria | 5393 |
| 109 | Ga0207428_10001560 | 3300027907 | Bacteria | 23941 |
| 110 | Ga0207428_10005648 | 3300027907 | Bacteria | 11629 |
| 111 | Ga0268264_10064698 | 3300028381 | Bacteria | 3079 |
| 112 | Ga0307515_10000495 | 3300028794 | Bacteria | 94319 |
| 113 | Ga0307516_10000687 | 3300031730 | Bacteria | 45935 |
| 114 | Ga0373926_0010982 | 3300035083 | Bacteria | 3041 |
| 115 | Ga0373944_0001186 | 3300035089 | Bacteria | 6506 |
| 116 | Ga0373923_0018205 | 3300035111 | Bacteria | 2700 |
| 117 | Ga0373936_0001249 | 3300035113 | Bacteria | 9172 |
| 118 | Ga0373939_0009097 | 3300035114 | Bacteria | 2455 |
| 119 | Ga0373945_0000456 | 3300035116 | Bacteria | 11511 |
| 120 | Ga0373960_0004780 | 3300035121 | Bacteria | 3119 |
| 121 | Ga0373943_0001578 | 3300035170 | Bacteria | 10319 |
| 122 | Ga0373946_0000076 | 3300035171 | Bacteria | 26669 |
| 123 | Ga0373924_0014719 | 3300035410 | Bacteria | 2959 |
| 124 | Ga0373935_0002410 | 3300035692 | Bacteria | 10704 |
| 125 | Ga0373927_0005781 | 3300035695 | Bacteria | 8491 |
| 126 | Ga0373925_0023030 | 3300037068 | Bacteria | 4545 |
| 127 | Ga0395900_0016346 | 3300037418 | Bacteria | 7564 |
| 128 | Ga0395900_0033033 | 3300037418 | Bacteria | 5325 |
| 129 | Ga0395900_0182176 | 3300037418 | Bacteria | 2134 |
| 130 | Ga0395905_0021634 | 3300037471 | Bacteria | 6083 |
| 131 | Ga0395901_0066310 | 3300038443 | Bacteria | 3760 |
| 132 | Ga0436360_0506781 | 3300039438 | Bacteria | 5151 |
| 133 | Ga0436361_0209375 | 3300039447 | Bacteria | 3364 |
| 134 | Ga0436362_0898626 | 3300039453 | Bacteria | 6767 |
| 135 | Ga0466961_0007854 | 3300044693 | Bacteria | 6793 |
| 136 | Ga0495603_0006867 | 3300046455 | Bacteria | 6828 |
| 137 | Ga0495603_0008359 | 3300046455 | Bacteria | 6255 |
| 138 | Ga0495603_0016354 | 3300046455 | Bacteria | 4488 |
| 139 | Ga0495629_0009276 | 3300046459 | Bacteria | 7197 |
| 140 | Ga0495641_0008352 | 3300046461 | Bacteria | 6329 |
| 141 | Ga0495582_0004147 | 3300046473 | Bacteria | 8145 |
| 142 | Ga0495639_0001583 | 3300046475 | Bacteria | 10159 |
| 143 | Ga0495639_0036381 | 3300046475 | Bacteria | 2205 |
| 144 | Ga0495662_0004833 | 3300046476 | Bacteria | 6752 |
| 145 | Ga0495618_0020141 | 3300046514 | Bacteria | 4107 |
| 146 | Ga0495630_0001953 | 3300046517 | Bacteria | 14328 |
| 147 | Ga0495644_0016253 | 3300046523 | Bacteria | 2849 |
| 148 | Ga0495665_0001419 | 3300046531 | Bacteria | 12850 |
| 149 | Ga0495586_0012935 | 3300046535 | Bacteria | 4425 |
| 150 | Ga0495586_0022348 | 3300046535 | Bacteria | 3376 |
| 151 | Ga0495598_0001395 | 3300046537 | Bacteria | 4769 |
| 152 | Ga0495634_0029492 | 3300046642 | Bacteria | 3798 |
| 153 | Ga0495635_0004412 | 3300046663 | Bacteria | 9745 |
| 154 | Ga0495659_0006754 | 3300046664 | Bacteria | 3625 |
| 155 | Ga0495588_0000693 | 3300046674 | Bacteria | 15531 |
| 156 | Ga0495647_0000255 | 3300046681 | Bacteria | 14586 |
| 157 | Ga0495624_0008158 | 3300046690 | Bacteria | 7328 |
| 158 | Ga0495674_0000855 | 3300047319 | Bacteria | 29080 |
| 159 | Ga0495676_0022074 | 3300047321 | Bacteria | 5546 |
| 160 | Ga0495676_0057639 | 3300047321 | Bacteria | 3062 |
| 161 | Ga0495680_0000781 | 3300047322 | Bacteria | 35634 |
| 162 | Ga0495677_0010440 | 3300047445 | Bacteria | 3411 |
| 163 | Ga0495593_0005929 | 3300047673 | Bacteria | 7197 |
| 164 | Ga0496108_0007384 | 3300048911 | Bacteria | 8912 |
| 165 | Ga0496108_0027731 | 3300048911 | Bacteria | 4680 |
| 166 | Ga0496110_0000280 | 3300048913 | Bacteria | 33262 |
| 167 | Ga0496111_0005606 | 3300048914 | Bacteria | 8072 |
| 168 | Ga0496111_0022481 | 3300048914 | Bacteria | 4416 |
| 169 | Ga0496114_0001783 | 3300048917 | Bacteria | 16337 |
| 170 | Ga0496124_0039600 | 3300048927 | Bacteria | 4084 |
| 171 | Ga0501032_0021954 | 3300049569 | Bacteria | 4431 |
| 172 | Ga0501033_0034760 | 3300049570 | Bacteria | 3778 |
| 173 | Ga0501033_0046806 | 3300049570 | Bacteria | 3216 |
| 174 | Ga0501036_0019420 | 3300049572 | Bacteria | 5705 |
| 175 | Ga0501036_0087722 | 3300049572 | Bacteria | 2630 |
| 176 | Ga0501038_0035481 | 3300049574 | Bacteria | 4378 |
| 177 | Ga0501039_0045608 | 3300049575 | Bacteria | 3387 |
| 178 | Ga0501040_0011246 | 3300049576 | Bacteria | 5858 |
| 179 | Ga0501040_0040408 | 3300049576 | Bacteria | 3174 |
| 180 | Ga0501041_0046187 | 3300049577 | Bacteria | 2649 |
| 181 | Ga0501042_0016773 | 3300049578 | Bacteria | 5036 |
| 182 | Ga0501043_0015638 | 3300049579 | Bacteria | 5947 |
| 183 | Ga0501047_0021491 | 3300049581 | Bacteria | 6197 |
| 184 | Ga0501048_0029655 | 3300049582 | Bacteria | 3966 |
| 185 | Ga0501068_0008624 | 3300049584 | Bacteria | 5681 |
| 186 | Ga0501069_0010606 | 3300049585 | Bacteria | 4882 |
| 187 | Ga0501072_0010453 | 3300049588 | Bacteria | 7070 |
| 188 | Ga0501072_0031720 | 3300049588 | Bacteria | 4138 |
| 189 | Ga0501073_0020510 | 3300049589 | Bacteria | 4767 |
| 190 | Ga0501075_0012494 | 3300049591 | Bacteria | 6037 |
| 191 | Ga0501077_0022391 | 3300049593 | Bacteria | 4003 |
| 192 | Ga0501080_0004048 | 3300049742 | Bacteria | 12983 |
| 193 | Ga0501083_0010026 | 3300049744 | Bacteria | 6684 |
| 194 | Ga0501035_0010805 | 3300049822 | Bacteria | 8455 |
| 195 | Ga0501044_0045608 | 3300049823 | Bacteria | 4541 |
| 196 | nmdc:mga00v17_163_c2 | 3300050491 | Bacteria | 26498 |
| 197 | nmdc:mga05p37_11985_c1 | 3300050507 | Bacteria | 10344 |
| 198 | nmdc:mga05p37_149028_c1 | 3300050507 | Bacteria | 2863 |
| 199 | nmdc:mga05p37_27863_c1 | 3300050507 | Bacteria | 6883 |
| 200 | nmdc:mga05p37_35842_c1 | 3300050507 | Bacteria | 6086 |
| 201 | nmdc:mga09592_5160_c1 | 3300050508 | Bacteria | 10611 |
| 202 | nmdc:mga09592_72638_c1 | 3300050508 | Bacteria | 2922 |
| 203 | nmdc:mga0qj67_544_c1 | 3300050509 | Bacteria | 25649 |
| 204 | nmdc:mga0qj67_67776_c1 | 3300050509 | Bacteria | 2844 |
| 205 | nmdc:mga06r32_2189_c1 | 3300050510 | Bacteria | 17511 |
| 206 | nmdc:mga06r32_37524_c1 | 3300050510 | Bacteria | 4583 |
| 207 | nmdc:mga0n895_46673_c1 | 3300050512 | Bacteria | 4233 |
| 208 | nmdc:mga0a205_5121_c1 | 3300050515 | Bacteria | 11788 |
| 209 | Ga0495655_0010161 | 3300053083 | Bacteria | 1849 |
| 210 | Ga0495619_0001090 | 3300053085 | Bacteria | 17832 |
| 211 | Ga0501084_0032502 | 3300054114 | Bacteria | 4364 |
| 212 | Ga0501082_0043969 | 3300060353 | Bacteria | 3853 |
| 213 | Ga0501082_0045937 | 3300060353 | Bacteria | 3765 |
| 214 | Ga0530510_0016702 | 3300061734 | Bacteria | 5197 |
| 215 | Ga0530510_0023934 | 3300061734 | Bacteria | 4355 |
| 216 | Ga0530510_0161819 | 3300061734 | Bacteria | 1656 |
| 217 | 2501941351 | 2501939600 | Bacteria | 6907073 |
| 218 | 2623585105 | 2622736626 | Bacteria | 7181580 |
| 219 | 2644455834 | 2643221681 | Bacteria | 3707866 |
| 220 | 2831939232 | 2831935698 | Bacteria | 5963223 |
| 221 | 2832008131 | 2832004796 | Bacteria | 6538017 |
| 222 | 2855684459 | 2855683550 | Bacteria | 7134265 |
| 223 | 2856858913 | 2856858025 | Bacteria | 7255264 |
| 224 | 2858872705 | 2858868258 | Bacteria | 7683772 |
| 225 | 2858902872 | 2858902515 | Bacteria | 7086037 |
| 226 | 2866068116 | 2866065130 | Bacteria | 6518152 |
| 227 | 2867510831 | 2867507094 | Bacteria | 6506033 |
| 228 | 2902584279 | 2902582711 | Bacteria | 6187705 |
| 229 | 2996223662 | 2996221748 | Bacteria | 6799777 |
| 230 | 649810841 | 649633069 | Bacteria | 6962533 |
| 231 | 8055415916 | 8055412473 | Bacteria | 6257500 |
| 232 | Ga0207693_10010944 | |||
| 233 | JGI24751J29686_10000376 | |||
| 234 | Ga0070658_10005499 | |||
| 235 | Ga0070658_10012726 | |||
| 236 | Ga0070683_100028706 | |||
| 237 | Ga0070683_100050482 | |||
| 238 | Ga0070683_100139922 | |||
| 239 | Ga0070670_100008204 | |||
| 240 | Ga0070670_100038554 | |||
| 241 | Ga0070680_100002601 | |||
| 242 | Ga0070661_100021836 | |||
| 243 | Ga0070675_100033554 | |||
| 244 | Ga0070675_100085230 | |||
| 245 | Ga0070674_100028268 | |||
| 246 | Ga0070703_10000342 | |||
| 247 | Ga0070703_10001976 | |||
| 248 | Ga0070694_100005762 | |||
| 249 | Ga0070708_100000214 | |||
| 250 | Ga0070663_100049177 | |||
| 251 | Ga0070681_10000077 | |||
| 252 | Ga0070681_10033628 | |||
| 253 | Ga0070681_10091482 | |||
| 254 | Ga0068867_100030135 | |||
| 255 | Ga0070706_100014570 | |||
| 256 | Ga0070707_100003752 | |||
| 257 | Ga0070698_100016211 | |||
| 258 | Ga0070698_100088988 | |||
| 259 | Ga0070679_100000135 | |||
| 260 | Ga0070679_100011142 | |||
| 261 | Ga0070679_100098457 | |||
| 262 | Ga0070684_100006110 | |||
| 263 | Ga0070684_100146418 | |||
| 264 | Ga0070697_100007840 | |||
| 265 | Ga0070672_100070104 | |||
| 266 | Ga0070665_100148615 | |||
| 267 | Ga0070704_100002147 | |||
| 268 | Ga0070704_100016454 | |||
| 269 | Ga0070664_100001488 | |||
| 270 | Ga0070664_100029794 | |||
| 271 | Ga0068857_100040191 | |||
| 272 | Ga0070702_100012708 | |||
| 273 | Ga0070702_100047254 | |||
| 274 | Ga0068864_100062352 | |||
| 275 | Ga0068864_100062968 | |||
| 276 | Ga0068866_10000781 | |||
| 277 | Ga0068861_100048479 | |||
| 278 | Ga0081455_10001472 | |||
| 279 | Ga0081455_10004768 | |||
| 280 | Ga0081455_10007412 | |||
| 281 | Ga0081539_10003151 | |||
| 282 | Ga0081539_10003713 | |||
| 283 | Ga0081539_10012144 | |||
| 284 | Ga0081539_10017136 | |||
| 285 | Ga0075364_10000776 | |||
| 286 | Ga0070715_10002703 | |||
| 287 | Ga0070712_100016652 | |||
| 288 | Ga0075430_100001351 | |||
| 289 | Ga0075430_100008087 | |||
| 290 | Ga0075430_100015841 | |||
| 291 | Ga0075431_100001552 | |||
| 292 | Ga0075433_10003118 | |||
| 293 | Ga0075434_100001343 | |||
| 294 | Ga0075429_100005358 | |||
| 295 | Ga0114129_10043560 | |||
| 296 | Ga0105243_10005541 | |||
| 297 | Ga0105242_10005500 | |||
| 298 | Ga0105242_10009695 | |||
| 299 | Ga0105242_10018087 | |||
| 300 | Ga0157369_10002377 | |||
| 301 | Ga0157378_10014936 | |||
| 302 | Ga0157372_10045355 | |||
| 303 | Ga0157372_10177074 | |||
| 304 | Ga0157375_10009139 | |||
| 305 | Ga0157375_10044320 | |||
| 306 | Ga0163163_10010836 | |||
| 307 | Ga0157380_10039394 | |||
| 308 | Ga0157377_10028286 | |||
| 309 | Ga0207653_10000233 | |||
| 310 | Ga0207653_10002423 | |||
| 311 | Ga0207645_10015952 | |||
| 312 | Ga0207643_10000118 | |||
| 313 | Ga0207643_10042695 | |||
| 314 | Ga0207705_10012320 | |||
| 315 | Ga0207684_10000233 | |||
| 316 | Ga0207707_10000089 | |||
| 317 | Ga0207707_10013831 | |||
| 318 | Ga0207660_10000091 | |||
| 319 | Ga0207652_10000015 | |||
| 320 | Ga0207652_10070799 | |||
| 321 | Ga0207646_10007965 | |||
| 322 | Ga0207646_10080025 | |||
| 323 | Ga0207650_10004288 | |||
| 324 | Ga0207650_10016046 | |||
| 325 | Ga0207659_10093583 | |||
| 326 | Ga0207709_10006170 | |||
| 327 | Ga0207709_10035052 | |||
| 328 | Ga0207669_10021282 | |||
| 329 | Ga0207661_10015691 | |||
| 330 | Ga0207661_10038081 | |||
| 331 | Ga0207678_10016760 | |||
| 332 | Ga0207708_10005403 | |||
| 333 | Ga0207708_10057832 | |||
| 334 | Ga0207648_10036407 | |||
| 335 | Ga0207676_10003891 | |||
| 336 | Ga0207674_10023622 | |||
| 337 | Ga0207674_10108681 | |||
| 338 | Ga0207675_100025079 | |||
| 339 | Ga0207683_10022665 | |||
| 340 | Ga0207428_10001560 | |||
| 341 | Ga0207428_10005648 | |||
| 342 | Ga0268264_10064698 | |||
| 343 | Ga0307515_10000495 | |||
| 344 | Ga0307516_10000687 | |||
| 345 | Ga0373926_0010982 | |||
| 346 | Ga0373944_0001186 | |||
| 347 | Ga0373923_0018205 | |||
| 348 | Ga0373936_0001249 | |||
| 349 | Ga0373939_0009097 | |||
| 350 | Ga0373945_0000456 | |||
| 351 | Ga0373960_0004780 | |||
| 352 | Ga0373943_0001578 | |||
| 353 | Ga0373946_0000076 | |||
| 354 | Ga0373924_0014719 | |||
| 355 | Ga0373935_0002410 | |||
| 356 | Ga0373927_0005781 | |||
| 357 | Ga0373925_0023030 | |||
| 358 | Ga0395900_0016346 | |||
| 359 | Ga0395900_0033033 | |||
| 360 | Ga0395900_0182176 | |||
| 361 | Ga0395905_0021634 | |||
| 362 | Ga0395901_0066310 | |||
| 363 | Ga0436360_0506781 | |||
| 364 | Ga0436361_0209375 | |||
| 365 | Ga0436362_0898626 | |||
| 366 | Ga0466961_0007854 | |||
| 367 | Ga0495603_0006867 | |||
| 368 | Ga0495603_0008359 | |||
| 369 | Ga0495603_0016354 | |||
| 370 | Ga0495629_0009276 | |||
| 371 | Ga0495641_0008352 | |||
| 372 | Ga0495582_0004147 | |||
| 373 | Ga0495639_0001583 | |||
| 374 | Ga0495639_0036381 | |||
| 375 | Ga0495662_0004833 | |||
| 376 | Ga0495618_0020141 | |||
| 377 | Ga0495630_0001953 | |||
| 378 | Ga0495644_0016253 | |||
| 379 | Ga0495665_0001419 | |||
| 380 | Ga0495586_0012935 | |||
| 381 | Ga0495586_0022348 | |||
| 382 | Ga0495598_0001395 | |||
| 383 | Ga0495634_0029492 | |||
| 384 | Ga0495635_0004412 | |||
| 385 | Ga0495659_0006754 | |||
| 386 | Ga0495588_0000693 | |||
| 387 | Ga0495647_0000255 | |||
| 388 | Ga0495624_0008158 | |||
| 389 | Ga0495674_0000855 | |||
| 390 | Ga0495676_0022074 | |||
| 391 | Ga0495676_0057639 | |||
| 392 | Ga0495680_0000781 | |||
| 393 | Ga0495677_0010440 | |||
| 394 | Ga0495593_0005929 | |||
| 395 | Ga0496108_0007384 | |||
| 396 | Ga0496108_0027731 | |||
| 397 | Ga0496110_0000280 | |||
| 398 | Ga0496111_0005606 | |||
| 399 | Ga0496111_0022481 | |||
| 400 | Ga0496114_0001783 | |||
| 401 | Ga0496124_0039600 | |||
| 402 | Ga0501032_0021954 | |||
| 403 | Ga0501033_0034760 | |||
| 404 | Ga0501033_0046806 | |||
| 405 | Ga0501036_0019420 | |||
| 406 | Ga0501036_0087722 | |||
| 407 | Ga0501038_0035481 | |||
| 408 | Ga0501039_0045608 | |||
| 409 | Ga0501040_0011246 | |||
| 410 | Ga0501040_0040408 | |||
| 411 | Ga0501041_0046187 | |||
| 412 | Ga0501042_0016773 | |||
| 413 | Ga0501043_0015638 | |||
| 414 | Ga0501047_0021491 | |||
| 415 | Ga0501048_0029655 | |||
| 416 | Ga0501068_0008624 | |||
| 417 | Ga0501069_0010606 | |||
| 418 | Ga0501072_0010453 | |||
| 419 | Ga0501072_0031720 | |||
| 420 | Ga0501073_0020510 | |||
| 421 | Ga0501075_0012494 | |||
| 422 | Ga0501077_0022391 | |||
| 423 | Ga0501080_0004048 | |||
| 424 | Ga0501083_0010026 | |||
| 425 | Ga0501035_0010805 | |||
| 426 | Ga0501044_0045608 | |||
| 427 | nmdc:mga00v17_163_c2 | |||
| 428 | nmdc:mga05p37_11985_c1 | |||
| 429 | nmdc:mga05p37_149028_c1 | |||
| 430 | nmdc:mga05p37_27863_c1 | |||
| 431 | nmdc:mga05p37_35842_c1 | |||
| 432 | nmdc:mga09592_5160_c1 | |||
| 433 | nmdc:mga09592_72638_c1 | |||
| 434 | nmdc:mga0qj67_544_c1 | |||
| 435 | nmdc:mga0qj67_67776_c1 | |||
| 436 | nmdc:mga06r32_2189_c1 | |||
| 437 | nmdc:mga06r32_37524_c1 | |||
| 438 | nmdc:mga0n895_46673_c1 | |||
| 439 | nmdc:mga0a205_5121_c1 | |||
| 440 | Ga0495655_0010161 | |||
| 441 | Ga0495619_0001090 | |||
| 442 | Ga0501084_0032502 | |||
| 443 | Ga0501082_0043969 | |||
| 444 | Ga0501082_0045937 | |||
| 445 | Ga0530510_0016702 | |||
| 446 | Ga0530510_0023934 | |||
| 447 | Ga0530510_0161819 | |||
| 448 | 2501941351 | |||
| 449 | 2623585105 | |||
| 450 | 2644455834 | |||
| 451 | 2831939232 | |||
| 452 | 2832008131 | |||
| 453 | 2855684459 | |||
| 454 | 2856858913 | |||
| 455 | 2858872705 | |||
| 456 | 2858902872 | |||
| 457 | 2866068116 | |||
| 458 | 2867510831 | |||
| 459 | 2902584279 | |||
| 460 | 2996223662 | |||
| 461 | 649810841 | |||
| 462 | 8055415916 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7r4g-assembly1.cif.gz_L | bovine complex i in the presence of im1761092, slack class ii (composite map) | 0.9093 | 20 | 578 |
| 7r4g-assembly1.cif.gz_L | bovine complex i in the presence of im1761092, slack class ii (composite map) | 0.9029 | 20 | 578 |
| 8beh-assembly1.cif.gz_L | cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane tip) | 0.9025 | 26 | 570 |
| 8beh-assembly1.cif.gz_M | cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (ci membrane tip) | 0.9007 | 298 | 496 |
| 7ar7-assembly1.cif.gz_L | cryo-em structure of arabidopsis thaliana complex-i (open conformation) | 0.8996 | 26 | 570 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_M1FQK6_1_136_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.7641 | 26 | 149 | 1.20.1070.10 |
| af_M1FQK6_1_136_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.6908 | 26 | 149 | 1.20.1070.10 |
| af_P0ABF8_3_179_1.20.120.1760 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.3416 | 101 | 292 | 1.20.120.1760 |
| af_M9ND25_542_777_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.3353 | 264 | 498 | 1.20.1070.10 |
| af_P0ABF8_3_179_1.20.120.1760 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.3286 | 101 | 292 | 1.20.120.1760 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1B1TJV2-F1-model_v4 | NADH dehydrogenase subunit F | 0.9705 | 61 | 206 |
GO:0003954
GO:0008137 GO:0009535 GO:0015990 GO:0042773 GO:0048038 |
| AF-A0A7X8WYM4-F1-model_v4 | NADH-quinone oxidoreductase subunit L (EC 1.6.5.-) | 0.9635 | 22 | 461 |
GO:0003954
GO:0008137 GO:0012505 GO:0015990 GO:0016020 GO:0042773 |
| AF-A0A3D4ALQ0-F1-model_v4 | NADH-quinone oxidoreductase subunit L | 0.9597 | 20 | 193 |
GO:0003954
GO:0008137 GO:0012505 GO:0015990 GO:0016020 GO:0042773 |
| AF-A0A7X8WYM4-F1-model_v4 | NADH-quinone oxidoreductase subunit L (EC 1.6.5.-) | 0.957 | 22 | 461 |
GO:0003954
GO:0008137 GO:0012505 GO:0015990 GO:0016020 GO:0042773 |
| AF-A0A382R9A4-F1-model_v4 | NADH-Ubiquinone oxidoreductase (complex I) chain 5 N-terminal domain-containing protein | 0.9522 | 21 | 181 |
GO:0003954
GO:0008137 GO:0015990 GO:0016020 GO:0042773 |