F344055

General Info

Members Datasets Scaffolds Average Seq Length
231 126 434 294

Family's Representative Sequence

Representative Sequence 3300013307|Ga0157372_10001881|Ga0157372_1000188113
Length 347
Sequence VRWRTFNARIHSRSIAFVAVAQPIELSSILSGCPGLPARKHAVGVYHTFHLGIFQERKMSKGLQNSNELADVLAKNEAVIVDEWIKQMSGATRRADLIKDVDLRTQCSRFLKLLRQGVESASSDLQSSGWQSVRDQLAEISRSRAQQGFTPTETATFVLSVKKPLFTLLRDQVGSNAGALAAELWATTELIDSLGLYTTEMFLKSREEIIRRQQEEMLELSTPVVKLWDGILALPVIGTLDSARTQVVMEALLENIVKTNSKVAIIDITGVPTVDTVVAQHLLKTVTAARLMGADCIISGVRPQIAQTIVHLGINLLDVTTKATLSDAFALALQRTGLALEHSLQHA

Samples

Sample ID Description Type Environment
1 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300030963 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
79 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
80 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
81 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
96 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
102 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
111 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
112 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
113 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
114 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
115 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
123 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
124 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
125 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
126 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.7
Metatranscriptomes 1.3
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.06
Rhizosphere 93.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157372_10001881 3300013307 Bacteria 22752
2 Ga0070658_10009389 3300005327 Bacteria 7856
3 Ga0068868_100579477 3300005338 Bacteria 992
4 Ga0070668_100095048 3300005347 Bacteria 2354
5 Ga0070709_10007188 3300005434 Bacteria 6099
6 Ga0070709_10044365 3300005434 Bacteria 2753
7 Ga0070709_10082199 3300005434 Bacteria 2104
8 Ga0070709_10129881 3300005434 Bacteria 1719
9 Ga0070709_10242886 3300005434 Bacteria 1294
10 Ga0070714_100067612 3300005435 Bacteria 3081
11 Ga0070714_100077373 3300005435 Bacteria 2889
12 Ga0070714_100147440 3300005435 Bacteria 2117
13 Ga0070713_100002977 3300005436 Bacteria 11129
14 Ga0070713_100015549 3300005436 Bacteria 5697
15 Ga0070713_100064777 3300005436 Bacteria 3068
16 Ga0070713_100101852 3300005436 Bacteria 2489
17 Ga0070713_100182650 3300005436 Bacteria 1886
18 Ga0070713_100246066 3300005436 Bacteria 1630
19 Ga0070710_10012536 3300005437 Bacteria 4213
20 Ga0070710_10129597 3300005437 Bacteria 1536
21 Ga0070710_10356793 3300005437 Bacteria 969
22 Ga0070711_100005368 3300005439 Bacteria 7663
23 Ga0070711_100008481 3300005439 Bacteria 6296
24 Ga0070711_100008882 3300005439 Bacteria 6166
25 Ga0070711_100020094 3300005439 Bacteria 4298
26 Ga0070711_100079454 3300005439 Bacteria 2333
27 Ga0070700_100223023 3300005441 Bacteria 1337
28 Ga0070681_10021097 3300005458 Bacteria 6526
29 Ga0070665_100026788 3300005548 Bacteria 5806
30 Ga0068855_100294599 3300005563 Bacteria 1798
31 Ga0068857_100161364 3300005577 Bacteria 2034
32 Ga0068857_100413150 3300005577 Bacteria 1257
33 Ga0068856_100019093 3300005614 Bacteria 6653
34 Ga0068856_100138033 3300005614 Bacteria 2444
35 Ga0070717_10053461 3300006028 Bacteria 3329
36 Ga0070717_10075731 3300006028 Bacteria 2815
37 Ga0070717_10082773 3300006028 Bacteria 2697
38 Ga0070717_10135134 3300006028 Bacteria 2123
39 Ga0070715_10065632 3300006163 Bacteria 1607
40 Ga0070716_100000323 3300006173 Bacteria 19282
41 Ga0070712_100000897 3300006175 Bacteria 17835
42 Ga0070712_100004275 3300006175 Bacteria 8792
43 Ga0070712_100009092 3300006175 Bacteria 6257
44 Ga0070712_100034909 3300006175 Bacteria 3411
45 Ga0070712_100139279 3300006175 Bacteria 1849
46 Ga0070712_100152430 3300006175 Bacteria 1776
47 Ga0070712_100276326 3300006175 Bacteria 1351
48 Ga0075428_100008562 3300006844 Bacteria 11345
49 Ga0075430_100005123 3300006846 Bacteria 11033
50 Ga0075430_100103812 3300006846 Bacteria 2373
51 Ga0075431_100003812 3300006847 Bacteria 14658
52 Ga0075431_100005012 3300006847 Bacteria 13026
53 Ga0075429_100014576 3300006880 Bacteria 6812
54 Ga0075429_100026061 3300006880 Bacteria 5075
55 Ga0075429_100572495 3300006880 Bacteria 990
56 Ga0105240_10022878 3300009093 Bacteria 8279
57 Ga0105240_10080201 3300009093 Bacteria 4015
58 Ga0105240_10138250 3300009093 Bacteria 2915
59 Ga0105240_10529895 3300009093 Bacteria 1306
60 Ga0111539_10001326 3300009094 Bacteria 32991
61 Ga0111539_10069906 3300009094 Bacteria 4145
62 Ga0105245_10312380 3300009098 Bacteria 1546
63 Ga0114129_10002134 3300009147 Bacteria 27265
64 Ga0114129_10056761 3300009147 Bacteria 5483
65 Ga0114129_10325366 3300009147 Bacteria 2043
66 Ga0105241_10006248 3300009174 Bacteria 8783
67 Ga0105237_10012566 3300009545 Bacteria 8920
68 Ga0105238_10361616 3300009551 Bacteria 1441
69 Ga0157373_10022980 3300013100 Bacteria 4522
70 Ga0157370_10381046 3300013104 Bacteria 1299
71 Ga0157369_10013414 3300013105 Bacteria 9265
72 Ga0157369_10052956 3300013105 Bacteria 4389
73 Ga0157374_10110953 3300013296 Bacteria 2638
74 Ga0157374_10174876 3300013296 Bacteria 2096
75 Ga0157378_10071657 3300013297 Bacteria 3112
76 Ga0157372_10001764 3300013307 Bacteria 23462
77 Ga0157372_10017977 3300013307 Bacteria 7597
78 Ga0157372_10052764 3300013307 Bacteria 4529
79 Ga0157372_10055161 3300013307 Bacteria 4437
80 Ga0157375_10559562 3300013308 Bacteria 1305
81 Ga0163163_10074236 3300014325 Bacteria 3392
82 Ga0182008_10080558 3300014497 Bacteria 1602
83 Ga0157376_10062068 3300014969 Bacteria 3144
84 Ga0157376_10096920 3300014969 Bacteria 2568
85 Ga0157376_10522770 3300014969 Bacteria 1170
86 Ga0182007_10006748 3300015262 Bacteria 4898
87 Ga0207685_10000180 3300025905 Bacteria 9569
88 Ga0207685_10067161 3300025905 Bacteria 1441
89 Ga0207685_10101224 3300025905 Bacteria 1232
90 Ga0207699_10006047 3300025906 Bacteria 5828
91 Ga0207699_10049586 3300025906 Bacteria 2472
92 Ga0207699_10167290 3300025906 Bacteria 1468
93 Ga0207705_10031545 3300025909 Bacteria 3783
94 Ga0207695_10211486 3300025913 Bacteria 1850
95 Ga0207693_10000006 3300025915 Bacteria 185928
96 Ga0207693_10002000 3300025915 Bacteria 17895
97 Ga0207693_10002769 3300025915 Bacteria 15176
98 Ga0207693_10036154 3300025915 Bacteria 3893
99 Ga0207693_10065829 3300025915 Bacteria 2837
100 Ga0207663_10001482 3300025916 Bacteria 10940
101 Ga0207663_10018995 3300025916 Bacteria 3863
102 Ga0207663_10057271 3300025916 Bacteria 2455
103 Ga0207663_10073182 3300025916 Bacteria 2217
104 Ga0207663_10216714 3300025916 Bacteria 1391
105 Ga0207652_10139543 3300025921 Bacteria 2167
106 Ga0207694_10348772 3300025924 Bacteria 1225
107 Ga0207650_10003858 3300025925 Bacteria 10243
108 Ga0207650_10007121 3300025925 Bacteria 7621
109 Ga0207659_10002175 3300025926 Bacteria 11648
110 Ga0207687_10093348 3300025927 Bacteria 2200
111 Ga0207700_10008423 3300025928 Bacteria 6386
112 Ga0207700_10050677 3300025928 Bacteria 3095
113 Ga0207700_10108107 3300025928 Bacteria 2233
114 Ga0207664_10246466 3300025929 Bacteria 1557
115 Ga0207664_10247605 3300025929 Bacteria 1554
116 Ga0207665_10000176 3300025939 Bacteria 42953
117 Ga0207665_10129568 3300025939 Bacteria 1789
118 Ga0207691_10143707 3300025940 Bacteria 2101
119 Ga0207667_10400978 3300025949 Bacteria 1397
120 Ga0207651_10290881 3300025960 Bacteria 1354
121 Ga0207640_10197734 3300025981 Bacteria 1521
122 Ga0207677_10063494 3300026023 Bacteria 2568
123 Ga0207677_10173301 3300026023 Bacteria 1689
124 Ga0207702_10109804 3300026078 Bacteria 2450
125 Ga0207702_10133849 3300026078 Bacteria 2234
126 Ga0207641_10005292 3300026088 Bacteria 11023
127 Ga0207676_10004925 3300026095 Bacteria 9469
128 Ga0207674_10007767 3300026116 Bacteria 12478
129 Ga0207674_10237523 3300026116 Bacteria 1770
130 Ga0207683_10360394 3300026121 Bacteria 1335
131 Ga0207428_10003651 3300027907 Bacteria 14834
132 Ga0207428_10010570 3300027907 Bacteria 8236
133 Ga0268266_10000159 3300028379 Bacteria 126969
134 Ga0265762_1000661 3300030760 Bacteria 6079
135 Ga0265762_1010732 3300030760 Bacteria 1636
136 Ga0265768_101763 3300030963 Bacteria 1049
137 Ga0307408_100007853 3300031548 Bacteria 7052
138 Ga0307408_100017916 3300031548 Bacteria 4748
139 Ga0307408_100019232 3300031548 Bacteria 4596
140 Ga0307405_10082800 3300031731 Bacteria 2101
141 Ga0307413_10097577 3300031824 Bacteria 1932
142 Ga0307407_10007769 3300031903 Bacteria 4878
143 Ga0307412_10140872 3300031911 Bacteria 1766
144 Ga0307416_100074170 3300032002 Bacteria 2841
145 Ga0307416_100108357 3300032002 Bacteria 2440
146 Ga0307414_10039231 3300032004 Bacteria 3188
147 Ga0307411_10101042 3300032005 Bacteria 2040
148 Ga0307411_10110515 3300032005 Bacteria 1965
149 Ga0307415_100002599 3300032126 Bacteria 9010
150 Ga0307415_100040463 3300032126 Bacteria 3088
151 Ga0373944_0046560 3300035089 Bacteria 1356
152 Ga0373955_0141567 3300035172 Bacteria 1411
153 Ga0373924_0014165 3300035410 Bacteria 3010
154 Ga0373935_0001586 3300035692 Bacteria 12672
155 Ga0373935_0267964 3300035692 Bacteria 1199
156 Ga0373935_0332479 3300035692 Bacteria 1080
157 Ga0373927_0315040 3300035695 Bacteria 1030
158 Ga0373937_0073763 3300036401 Bacteria 3149
159 Ga0373937_0101075 3300036401 Bacteria 2676
160 Ga0373925_0055471 3300037068 Bacteria 2966
161 Ga0373925_0095706 3300037068 Bacteria 2275
162 Ga0453684_0282033 3300044712 Bacteria 1894
163 Ga0466967_0154782 3300045976 Bacteria 2146
164 Ga0495629_0015060 3300046459 Bacteria 5558
165 Ga0495580_0001268 3300046472 Bacteria 22280
166 Ga0495580_0014762 3300046472 Bacteria 5918
167 Ga0495580_0030892 3300046472 Bacteria 3874
168 Ga0495580_0078439 3300046472 Bacteria 2304
169 Ga0495580_0111286 3300046472 Bacteria 1902
170 Ga0495594_0077707 3300046499 Bacteria 1852
171 Ga0495628_0071418 3300046516 Bacteria 2706
172 Ga0495630_0115142 3300046517 Bacteria 2037
173 Ga0495652_0342791 3300046529 Bacteria 1073
174 Ga0495645_0253528 3300046543 Bacteria 1169
175 Ga0495613_0269505 3300046689 Bacteria 1185
176 Ga0495674_0034041 3300047319 Bacteria 4609
177 Ga0495593_0136151 3300047673 Bacteria 1245
178 Ga0495602_0266785 3300048088 Bacteria 1267
179 Ga0496100_0104286 3300048903 Bacteria 1959
180 Ga0496102_0100711 3300048905 Bacteria 2684
181 Ga0496102_0385819 3300048905 Bacteria 1318
182 Ga0496104_0119448 3300048907 Bacteria 2531
183 Ga0496104_0425757 3300048907 Bacteria 1239
184 Ga0496105_0097376 3300048908 Bacteria 2430
185 Ga0496110_0170926 3300048913 Bacteria 1972
186 Ga0496110_0258231 3300048913 Bacteria 1586
187 Ga0496112_0023045 3300048915 Bacteria 5942
188 Ga0496112_0301005 3300048915 Bacteria 1549
189 Ga0496112_0622539 3300048915 Bacteria 1010
190 Ga0496114_0127256 3300048917 Bacteria 2197
191 Ga0496115_0005083 3300048918 Bacteria 9561
192 Ga0501291_001413 3300049514 Bacteria 2779
193 Ga0501032_0158054 3300049569 Bacteria 1489
194 Ga0501036_0019541 3300049572 Bacteria 5687
195 Ga0501042_0015219 3300049578 Bacteria 5264
196 Ga0501071_0005747 3300049587 Bacteria 8002
197 Ga0501075_0087865 3300049591 Bacteria 2356
198 Ga0501076_0194102 3300049592 Bacteria 1657
199 Ga0501076_0245503 3300049592 Bacteria 1465
200 Ga0501198_022607 3300049649 Bacteria 1008
201 Ga0501083_0112498 3300049744 Bacteria 1789
202 Ga0501283_004485 3300049779 Bacteria 1890
203 Ga0501045_0120595 3300049824 Bacteria 1947
204 nmdc:mga05p37_34050_c1 3300050507 Bacteria 6239
205 nmdc:mga05p37_3645_c1 3300050507 Bacteria 18011
206 nmdc:mga09592_16051_c1 3300050508 Bacteria 6122
207 nmdc:mga09592_6547_c2 3300050508 Bacteria 3904
208 nmdc:mga06r32_24592_c1 3300050510 Bacteria 5594
209 nmdc:mga06r32_9978_c1 3300050510 Bacteria 8567
210 nmdc:mga08y16_2349_c1 3300050511 Bacteria 19391
211 nmdc:mga08y16_993_c1 3300050511 Bacteria 27651
212 nmdc:mga0n895_510657_c1 3300050512 Bacteria 1210
213 Ga0495601_0182950 3300053077 Bacteria 1370
214 Ga0590071_000381 3300059421 Bacteria 13022
215 Ga0590074_001361 3300059423 Bacteria 3915
216 Ga0590075_000174 3300059424 Bacteria 17903
217 Ga0590077_000539 3300059426 Bacteria 10461
218 Ga0157372_10001881
219 Ga0070658_10009389
220 Ga0068868_100579477
221 Ga0070668_100095048
222 Ga0070709_10007188
223 Ga0070709_10044365
224 Ga0070709_10082199
225 Ga0070709_10129881
226 Ga0070709_10242886
227 Ga0070714_100067612
228 Ga0070714_100077373
229 Ga0070714_100147440
230 Ga0070713_100002977
231 Ga0070713_100015549
232 Ga0070713_100064777
233 Ga0070713_100101852
234 Ga0070713_100182650
235 Ga0070713_100246066
236 Ga0070710_10012536
237 Ga0070710_10129597
238 Ga0070710_10356793
239 Ga0070711_100005368
240 Ga0070711_100008481
241 Ga0070711_100008882
242 Ga0070711_100020094
243 Ga0070711_100079454
244 Ga0070700_100223023
245 Ga0070681_10021097
246 Ga0070665_100026788
247 Ga0068855_100294599
248 Ga0068857_100161364
249 Ga0068857_100413150
250 Ga0068856_100019093
251 Ga0068856_100138033
252 Ga0070717_10053461
253 Ga0070717_10075731
254 Ga0070717_10082773
255 Ga0070717_10135134
256 Ga0070715_10065632
257 Ga0070716_100000323
258 Ga0070712_100000897
259 Ga0070712_100004275
260 Ga0070712_100009092
261 Ga0070712_100034909
262 Ga0070712_100139279
263 Ga0070712_100152430
264 Ga0070712_100276326
265 Ga0075428_100008562
266 Ga0075430_100005123
267 Ga0075430_100103812
268 Ga0075431_100003812
269 Ga0075431_100005012
270 Ga0075429_100014576
271 Ga0075429_100026061
272 Ga0075429_100572495
273 Ga0105240_10022878
274 Ga0105240_10080201
275 Ga0105240_10138250
276 Ga0105240_10529895
277 Ga0111539_10001326
278 Ga0111539_10069906
279 Ga0105245_10312380
280 Ga0114129_10002134
281 Ga0114129_10056761
282 Ga0114129_10325366
283 Ga0105241_10006248
284 Ga0105237_10012566
285 Ga0105238_10361616
286 Ga0157373_10022980
287 Ga0157370_10381046
288 Ga0157369_10013414
289 Ga0157369_10052956
290 Ga0157374_10110953
291 Ga0157374_10174876
292 Ga0157378_10071657
293 Ga0157372_10001764
294 Ga0157372_10017977
295 Ga0157372_10052764
296 Ga0157372_10055161
297 Ga0157375_10559562
298 Ga0163163_10074236
299 Ga0182008_10080558
300 Ga0157376_10062068
301 Ga0157376_10096920
302 Ga0157376_10522770
303 Ga0182007_10006748
304 Ga0207685_10000180
305 Ga0207685_10067161
306 Ga0207685_10101224
307 Ga0207699_10006047
308 Ga0207699_10049586
309 Ga0207699_10167290
310 Ga0207705_10031545
311 Ga0207695_10211486
312 Ga0207693_10000006
313 Ga0207693_10002000
314 Ga0207693_10002769
315 Ga0207693_10036154
316 Ga0207693_10065829
317 Ga0207663_10001482
318 Ga0207663_10018995
319 Ga0207663_10057271
320 Ga0207663_10073182
321 Ga0207663_10216714
322 Ga0207652_10139543
323 Ga0207694_10348772
324 Ga0207650_10003858
325 Ga0207650_10007121
326 Ga0207659_10002175
327 Ga0207687_10093348
328 Ga0207700_10008423
329 Ga0207700_10050677
330 Ga0207700_10108107
331 Ga0207664_10246466
332 Ga0207664_10247605
333 Ga0207665_10000176
334 Ga0207665_10129568
335 Ga0207691_10143707
336 Ga0207667_10400978
337 Ga0207651_10290881
338 Ga0207640_10197734
339 Ga0207677_10063494
340 Ga0207677_10173301
341 Ga0207702_10109804
342 Ga0207702_10133849
343 Ga0207641_10005292
344 Ga0207676_10004925
345 Ga0207674_10007767
346 Ga0207674_10237523
347 Ga0207683_10360394
348 Ga0207428_10003651
349 Ga0207428_10010570
350 Ga0268266_10000159
351 Ga0265762_1000661
352 Ga0265762_1010732
353 Ga0265768_101763
354 Ga0307408_100007853
355 Ga0307408_100017916
356 Ga0307408_100019232
357 Ga0307405_10082800
358 Ga0307413_10097577
359 Ga0307407_10007769
360 Ga0307412_10140872
361 Ga0307416_100074170
362 Ga0307416_100108357
363 Ga0307414_10039231
364 Ga0307411_10101042
365 Ga0307411_10110515
366 Ga0307415_100002599
367 Ga0307415_100040463
368 Ga0373944_0046560
369 Ga0373955_0141567
370 Ga0373924_0014165
371 Ga0373935_0001586
372 Ga0373935_0267964
373 Ga0373935_0332479
374 Ga0373927_0315040
375 Ga0373937_0073763
376 Ga0373937_0101075
377 Ga0373925_0055471
378 Ga0373925_0095706
379 Ga0453684_0282033
380 Ga0466967_0154782
381 Ga0495629_0015060
382 Ga0495580_0001268
383 Ga0495580_0014762
384 Ga0495580_0030892
385 Ga0495580_0078439
386 Ga0495580_0111286
387 Ga0495594_0077707
388 Ga0495628_0071418
389 Ga0495630_0115142
390 Ga0495652_0342791
391 Ga0495645_0253528
392 Ga0495613_0269505
393 Ga0495674_0034041
394 Ga0495593_0136151
395 Ga0495602_0266785
396 Ga0496100_0104286
397 Ga0496102_0100711
398 Ga0496102_0385819
399 Ga0496104_0119448
400 Ga0496104_0425757
401 Ga0496105_0097376
402 Ga0496110_0170926
403 Ga0496110_0258231
404 Ga0496112_0023045
405 Ga0496112_0301005
406 Ga0496112_0622539
407 Ga0496114_0127256
408 Ga0496115_0005083
409 Ga0501291_001413
410 Ga0501032_0158054
411 Ga0501036_0019541
412 Ga0501042_0015219
413 Ga0501071_0005747
414 Ga0501075_0087865
415 Ga0501076_0194102
416 Ga0501076_0245503
417 Ga0501198_022607
418 Ga0501083_0112498
419 Ga0501283_004485
420 Ga0501045_0120595
421 nmdc:mga05p37_34050_c1
422 nmdc:mga05p37_3645_c1
423 nmdc:mga09592_16051_c1
424 nmdc:mga09592_6547_c2
425 nmdc:mga06r32_24592_c1
426 nmdc:mga06r32_9978_c1
427 nmdc:mga08y16_2349_c1
428 nmdc:mga08y16_993_c1
429 nmdc:mga0n895_510657_c1
430 Ga0495601_0182950
431 Ga0590071_000381
432 Ga0590074_001361
433 Ga0590075_000174
434 Ga0590077_000539

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14361

RsbRD_N

RsbT co-antagonist protein rsbRD N-terminal domain

69

170

0.97

PF01740

STAS

STAS domain

222

328

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.9205 159 274
6qcm-assembly1.cif.gz_d cryo em structure of the listeria stressosome 0.9009 161 275
6jhk-assembly1.cif.gz_A crystal structure of bacillus subtilis rsbs 0.8983 159 274
7b0u-assembly1.cif.gz_F stressosome complex from listeria innocua 0.8927 159 275
6qcm-assembly1.cif.gz_I cryo em structure of the listeria stressosome 0.8811 159 275
ID Description Score Start End Superfamily
af_A0A0N7KGR6_2_88_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8735 200 275 3.30.750.24
af_P53273_654_785_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8512 167 270 3.30.750.24
af_Q7K4I4_467_579_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8471 169 267 3.30.750.24
af_B0V3V8_450_565_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8384 160 272 3.30.750.24
af_I1KA21_504_648_3.30.750.24 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;STAS domain 0.8367 166 272 3.30.750.24
ID Description Score Start End GO Terms
AF-A0A6G2XJT0-F1-model_v4 STAS domain-containing protein 0.9451 161 273
AF-A0A1Q6YD31-F1-model_v4 Histidine kinase 0.9344 149 275 GO:0006355
AF-A0A564Q1T5-F1-model_v4 STAS domain-containing protein 0.9323 160 252
AF-A0A1I2ERV7-F1-model_v4 Anti-anti-sigma factor 0.9305 137 275
AF-A0A845ENF5-F1-model_v4 deleted 0.9297 153 270

Map