F343915

General Info

Members Datasets Scaffolds Average Seq Length
231 160 462 310

Family's Representative Sequence

Representative Sequence 3300006237|Ga0097621_100002239|Ga0097621_1000022392
Length 322
Sequence MEVKGGMEMSIRLGSRGSPLALAQSRLVAAMLAKNSGVEADAFPILTFMTSGDKIQGRLQDQGGKGLFTKELDEALLDGRIDAAIHSMKDLPTRMPPGIVLACVPSREDPRDGFIAAGAKTVMDLAPGATIGTASLRRQAQTLHLRPDLKVELLRGRVETRLAKIESGALDATYLALAGLRRLGLEKHVASIVNSEAMPPAPGQGALAITARAGDDKTLALLAPLNIAEHAITTTAERAFLQALDGSCRTPIAALAKIADGKLAFLGEVLTPDGKHRWRRRESVVLGGDAEGTARALGLRLGTEIKAEAGPLYQAHFGDNGW

Samples

Sample ID Description Type Environment
1 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
48 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
82 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
87 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
88 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
94 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
105 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
112 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
113 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
116 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
123 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
149 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
150 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
151 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
152 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
153 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
154 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
155 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
156 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
157 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
160 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.13
Metatranscriptomes 0
Isolates 0.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.79
Nodule 0.43
Rhizoplane 0
Rhizosphere 88.31
Stem 0
Stem Tuber 0
Unclassified 0.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0097621_100002239 3300006237 Bacteria 13249
2 JGI25165J46597_1000008 3300003214 Bacteria 478603
3 JGI25153J46596_10004185 3300003215 Bacteria 7827
4 rootH1_10083233 3300003323 Bacteria 1638
5 Ga0070658_10018590 3300005327 Bacteria 5566
6 Ga0070658_10019000 3300005327 Bacteria 5505
7 Ga0070676_10056861 3300005328 Bacteria 2313
8 Ga0070683_100255345 3300005329 Bacteria 1667
9 Ga0068869_100001709 3300005334 Bacteria 13109
10 Ga0070666_10002182 3300005335 Bacteria 11893
11 Ga0068868_100084211 3300005338 Bacteria 2553
12 Ga0070660_100224682 3300005339 Bacteria 1527
13 Ga0070671_100352660 3300005355 Bacteria 1256
14 Ga0070673_100171555 3300005364 Bacteria 1852
15 Ga0070667_100010845 3300005367 Bacteria 7534
16 Ga0070713_100445720 3300005436 Bacteria 1215
17 Ga0070711_100204314 3300005439 Bacteria 1526
18 Ga0070678_100022321 3300005456 Bacteria 4192
19 Ga0070678_100089925 3300005456 Bacteria 2351
20 Ga0070678_100158542 3300005456 Bacteria 1831
21 Ga0070662_100030223 3300005457 Bacteria 3788
22 Ga0070679_100003839 3300005530 Bacteria 13800
23 Ga0070679_100037801 3300005530 Bacteria 4796
24 Ga0070679_100085088 3300005530 Bacteria 3149
25 Ga0070693_100113949 3300005547 Bacteria 1667
26 Ga0070665_100002050 3300005548 Bacteria 22669
27 Ga0070665_100008260 3300005548 Bacteria 10530
28 Ga0070665_100103268 3300005548 Bacteria 2854
29 Ga0070665_100329837 3300005548 Bacteria 1530
30 Ga0068855_100083172 3300005563 Bacteria 3708
31 Ga0068855_100087318 3300005563 Bacteria 3605
32 Ga0068855_100123814 3300005563 Bacteria 2957
33 Ga0068857_100161910 3300005577 Bacteria 2031
34 Ga0068856_100042629 3300005614 Bacteria 4464
35 Ga0068856_100258202 3300005614 Bacteria 1758
36 Ga0068858_100282362 3300005842 Bacteria 1581
37 Ga0068858_100433844 3300005842 Bacteria 1265
38 Ga0070712_100016450 3300006175 Bacteria 4779
39 Ga0097621_100067204 3300006237 Bacteria 2954
40 Ga0097621_100091543 3300006237 Bacteria 2545
41 Ga0097621_100117605 3300006237 Bacteria 2252
42 Ga0097621_100169227 3300006237 Bacteria 1882
43 Ga0097621_100309171 3300006237 Bacteria 1398
44 Ga0068871_100000115 3300006358 Bacteria 49397
45 Ga0068871_100036953 3300006358 Bacteria 3892
46 Ga0068871_100323927 3300006358 Bacteria 1358
47 Ga0075434_100128381 3300006871 Bacteria 2553
48 Ga0105240_10111236 3300009093 Bacteria 3314
49 Ga0105240_10350688 3300009093 Bacteria 1674
50 Ga0105240_10501384 3300009093 Bacteria 1350
51 Ga0105245_10016812 3300009098 Bacteria 6387
52 Ga0105241_10065673 3300009174 Bacteria 2804
53 Ga0105241_10232421 3300009174 Bacteria 1555
54 Ga0105241_10243304 3300009174 Bacteria 1522
55 Ga0105241_10582242 3300009174 Bacteria 1009
56 Ga0105242_10042501 3300009176 Bacteria 3671
57 Ga0105242_10134619 3300009176 Bacteria 2137
58 Ga0105242_10163038 3300009176 Bacteria 1953
59 Ga0105248_10062205 3300009177 Bacteria 4192
60 Ga0105237_10040946 3300009545 Bacteria 4673
61 Ga0105238_10080732 3300009551 Bacteria 3241
62 Ga0105238_10178902 3300009551 Bacteria 2098
63 Ga0105238_10235219 3300009551 Bacteria 1809
64 Ga0105249_10083942 3300009553 Bacteria 2966
65 Ga0105239_10309142 3300010375 Bacteria 1781
66 Ga0105239_10457616 3300010375 Bacteria 1448
67 Ga0157371_10043951 3300013102 Bacteria 3182
68 Ga0157370_10124269 3300013104 Bacteria 2409
69 Ga0157374_10134622 3300013296 Bacteria 2394
70 Ga0157378_10071951 3300013297 Bacteria 3106
71 Ga0157378_10610402 3300013297 Bacteria 1103
72 Ga0163162_10014669 3300013306 Bacteria 7658
73 Ga0163162_10044721 3300013306 Bacteria 4435
74 Ga0157372_10781006 3300013307 Bacteria 1110
75 Ga0157375_10111780 3300013308 Bacteria 2831
76 Ga0163163_10000016 3300014325 Bacteria 213966
77 Ga0163163_10248738 3300014325 Bacteria 1828
78 Ga0157379_10000131 3300014968 Bacteria 53172
79 Ga0157379_10001242 3300014968 Bacteria 20672
80 Ga0157379_10492401 3300014968 Bacteria 1136
81 Ga0213871_10007604 3300021441 Unclassified 2353
82 Ga0209233_1000006 3300025261 Bacteria 1473685
83 Ga0209758_1000032 3300025297 Bacteria 481623
84 Ga0209758_1000538 3300025297 Bacteria 60197
85 Ga0207688_10142516 3300025901 Bacteria 1411
86 Ga0207680_10035438 3300025903 Bacteria 2866
87 Ga0207705_10013675 3300025909 Bacteria 5855
88 Ga0207654_10222577 3300025911 Bacteria 1253
89 Ga0207695_10051728 3300025913 Bacteria 4310
90 Ga0207695_10369188 3300025913 Bacteria 1321
91 Ga0207695_10410989 3300025913 Bacteria 1238
92 Ga0207693_10072991 3300025915 Bacteria 2686
93 Ga0207693_10379795 3300025915 Bacteria 1105
94 Ga0207694_10062594 3300025924 Bacteria 2897
95 Ga0207659_10057208 3300025926 Bacteria 2795
96 Ga0207700_10532561 3300025928 Bacteria 1041
97 Ga0207644_10330446 3300025931 Bacteria 1234
98 Ga0207706_10024956 3300025933 Bacteria 5359
99 Ga0207686_10011869 3300025934 Bacteria 4781
100 Ga0207665_10136295 3300025939 Bacteria 1747
101 Ga0207711_10007386 3300025941 Bacteria 9198
102 Ga0207689_10027154 3300025942 Bacteria 4793
103 Ga0207661_10140064 3300025944 Bacteria 2081
104 Ga0207667_10209133 3300025949 Bacteria 2000
105 Ga0207667_10299561 3300025949 Bacteria 1643
106 Ga0207651_10077086 3300025960 Bacteria 2385
107 Ga0207668_10226680 3300025972 Bacteria 1504
108 Ga0207677_10055024 3300026023 Bacteria 2719
109 Ga0207677_10277142 3300026023 Bacteria 1375
110 Ga0207703_10106175 3300026035 Bacteria 2388
111 Ga0207703_10121129 3300026035 Bacteria 2246
112 Ga0207639_10216697 3300026041 Bacteria 1651
113 Ga0207702_10199714 3300026078 Bacteria 1853
114 Ga0207648_10187359 3300026089 Bacteria 1833
115 Ga0207674_10327850 3300026116 Bacteria 1481
116 Ga0207675_100087035 3300026118 Bacteria 2934
117 Ga0207683_10002537 3300026121 Bacteria 15936
118 Ga0207683_10026235 3300026121 Bacteria 5029
119 Ga0207698_10307717 3300026142 Bacteria 1478
120 Ga0268266_10001197 3300028379 Bacteria 32012
121 Ga0268266_10056371 3300028379 Bacteria 3381
122 Ga0268266_10090470 3300028379 Bacteria 2682
123 Ga0265318_10002820 3300028577 Bacteria 9070
124 Ga0265338_10006734 3300028800 Bacteria 14512
125 Ga0265338_10020121 3300028800 Bacteria 7037
126 Ga0265338_10082594 3300028800 Bacteria 2689
127 Ga0265325_10009845 3300031241 Bacteria 5565
128 Ga0265325_10046056 3300031241 Bacteria 2263
129 Ga0265340_10015328 3300031247 Bacteria 3983
130 Ga0265331_10000956 3300031250 Bacteria 22980
131 Ga0265316_10056620 3300031344 Bacteria 3061
132 Ga0265313_10001228 3300031595 Bacteria 24429
133 Ga0265313_10007230 3300031595 Bacteria 7639
134 Ga0265313_10020749 3300031595 Bacteria 3616
135 Ga0316579_10006101 3300031691 Bacteria 4895
136 Ga0265314_10001388 3300031711 Bacteria 27152
137 Ga0265314_10008513 3300031711 Bacteria 8770
138 Ga0265314_10124106 3300031711 Bacteria 1620
139 Ga0265342_10178485 3300031712 Bacteria 1164
140 Ga0307516_10158834 3300031730 Bacteria 2013
141 Ga0307412_10169982 3300031911 Bacteria 1629
142 Ga0373939_0016645 3300035114 Bacteria 1941
143 Ga0373954_0152295 3300035118 Bacteria 1130
144 Ga0373957_0060585 3300035120 Bacteria 1465
145 Ga0373960_0036062 3300035121 Bacteria 1407
146 Ga0373955_0007716 3300035172 Bacteria 4956
147 Ga0373937_0027462 3300036401 Bacteria 5147
148 Ga0395898_0069842 3300037466 Bacteria 3397
149 Ga0395905_0621704 3300037471 Bacteria 982
150 Ga0395901_0183419 3300038443 Bacteria 2195
151 Ga0436365_0124297 3300039437 Bacteria 1200
152 Ga0436360_1146606 3300039438 Bacteria 6255
153 Ga0436363_1695597 3300039450 Bacteria 1991
154 Ga0436362_1134141 3300039453 Bacteria 7325
155 Ga0451849_0939427 3300041505 Bacteria 2232
156 Ga0439464_0046325 3300042439 Bacteria 1250
157 Ga0466963_0004913 3300044694 Bacteria 7794
158 Ga0466963_0165051 3300044694 Bacteria 1543
159 Ga0466957_0039333 3300044842 Bacteria 2853
160 Ga0466967_0004481 3300045976 Bacteria 9428
161 Ga0466967_0106336 3300045976 Bacteria 2572
162 Ga0495629_0161991 3300046459 Bacteria 1554
163 Ga0495583_0007856 3300046506 Bacteria 6626
164 Ga0495608_0051514 3300046511 Bacteria 2728
165 Ga0495609_0009531 3300046538 Bacteria 4696
166 Ga0495621_0012445 3300046539 Bacteria 2652
167 Ga0495622_0022220 3300046557 Bacteria 2955
168 Ga0495667_0032296 3300046559 Bacteria 3510
169 Ga0495635_0030423 3300046663 Bacteria 3752
170 Ga0495657_0087627 3300046675 Bacteria 2003
171 Ga0495658_0043393 3300046683 Bacteria 2515
172 Ga0495600_0187090 3300046809 Bacteria 1333
173 Ga0495604_0011244 3300047317 Bacteria 7105
174 Ga0495680_0008347 3300047322 Bacteria 9419
175 Ga0495593_0041451 3300047673 Bacteria 2475
176 Ga0496121_0003690 3300048924 Bacteria 21494
177 Ga0496121_0335690 3300048924 Bacteria 1012
178 Ga0496126_0291505 3300048929 Bacteria 1349
179 Ga0501033_0004484 3300049570 Bacteria 11169
180 Ga0501033_0016237 3300049570 Bacteria 5639
181 Ga0501034_0088636 3300049571 Bacteria 3092
182 Ga0501034_0161063 3300049571 Bacteria 2215
183 Ga0501036_0208825 3300049572 Bacteria 1641
184 Ga0501037_0104697 3300049573 Bacteria 2040
185 Ga0501037_0104778 3300049573 Bacteria 2039
186 Ga0501046_0032739 3300049580 Bacteria 4207
187 Ga0501047_0002583 3300049581 Bacteria 17234
188 Ga0501047_0009833 3300049581 Bacteria 9038
189 Ga0501047_0013990 3300049581 Bacteria 7626
190 Ga0501047_0045166 3300049581 Bacteria 4259
191 Ga0501047_0083720 3300049581 Bacteria 3066
192 Ga0501069_0016344 3300049585 Bacteria 3985
193 Ga0501070_0025968 3300049586 Bacteria 4913
194 Ga0501070_0049732 3300049586 Bacteria 3481
195 Ga0501070_0059320 3300049586 Bacteria 3172
196 Ga0501071_0047958 3300049587 Bacteria 3070
197 Ga0501073_0294974 3300049589 Bacteria 1119
198 Ga0501080_0038614 3300049742 Bacteria 4457
199 Ga0501035_0000581 3300049822 Bacteria 40293
200 Ga0501035_0010387 3300049822 Bacteria 8635
201 Ga0501035_0062573 3300049822 Bacteria 3311
202 Ga0501044_0001058 3300049823 Bacteria 33113
203 Ga0501044_0032140 3300049823 Bacteria 5517
204 Ga0501044_0202790 3300049823 Bacteria 1941
205 nmdc:mga05p37_290_c1 3300050507 Bacteria 52425
206 nmdc:mga09592_2994_c1 3300050508 Bacteria 13696
207 nmdc:mga0qj67_2739_c1 3300050509 Bacteria 12638
208 nmdc:mga06r32_2029_c1 3300050510 Bacteria 18097
209 nmdc:mga08y16_844_c1 3300050511 Bacteria 29426
210 nmdc:mga0n895_20783_c1 3300050512 Bacteria 6130
211 nmdc:mga0n895_22082_c1 3300050512 Bacteria 5964
212 nmdc:mga0rr50_75708_c1 3300050513 Bacteria 2581
213 nmdc:mga0a205_9541_c1 3300050515 Bacteria 8880
214 Ga0495601_0001939 3300053077 Bacteria 11573
215 Ga0495619_0000259 3300053085 Bacteria 38593
216 Ga0500643_000008 3300053087 Bacteria 457931
217 Ga0500643_002781 3300053087 Bacteria 8748
218 Ga0500644_0003941 3300053088 Bacteria 3696
219 Ga0500641_0036798 3300053096 Bacteria 1959
220 Ga0500555_052966 3300053103 Bacteria 1107
221 Ga0500595_000001 3300053119 Bacteria 1088438
222 Ga0500595_000627 3300053119 Bacteria 21188
223 Ga0500595_006545 3300053119 Bacteria 4930
224 Ga0500652_046960 3300053131 Bacteria 1754
225 Ga0500573_0000051 3300053140 Bacteria 95469
226 Ga0500577_0085390 3300053142 Bacteria 1266
227 Ga0500616_0000001 3300053153 Bacteria 1986011
228 Ga0500645_000189 3300053730 Bacteria 47865
229 Ga0501082_0002277 3300060353 Bacteria 16813
230 2585233332 2582581299 Bacteria 6518058
231 8018129494 8018127388 Bacteria 7351159
232 Ga0097621_100002239
233 JGI25165J46597_1000008
234 JGI25153J46596_10004185
235 rootH1_10083233
236 Ga0070658_10018590
237 Ga0070658_10019000
238 Ga0070676_10056861
239 Ga0070683_100255345
240 Ga0068869_100001709
241 Ga0070666_10002182
242 Ga0068868_100084211
243 Ga0070660_100224682
244 Ga0070671_100352660
245 Ga0070673_100171555
246 Ga0070667_100010845
247 Ga0070713_100445720
248 Ga0070711_100204314
249 Ga0070678_100022321
250 Ga0070678_100089925
251 Ga0070678_100158542
252 Ga0070662_100030223
253 Ga0070679_100003839
254 Ga0070679_100037801
255 Ga0070679_100085088
256 Ga0070693_100113949
257 Ga0070665_100002050
258 Ga0070665_100008260
259 Ga0070665_100103268
260 Ga0070665_100329837
261 Ga0068855_100083172
262 Ga0068855_100087318
263 Ga0068855_100123814
264 Ga0068857_100161910
265 Ga0068856_100042629
266 Ga0068856_100258202
267 Ga0068858_100282362
268 Ga0068858_100433844
269 Ga0070712_100016450
270 Ga0097621_100067204
271 Ga0097621_100091543
272 Ga0097621_100117605
273 Ga0097621_100169227
274 Ga0097621_100309171
275 Ga0068871_100000115
276 Ga0068871_100036953
277 Ga0068871_100323927
278 Ga0075434_100128381
279 Ga0105240_10111236
280 Ga0105240_10350688
281 Ga0105240_10501384
282 Ga0105245_10016812
283 Ga0105241_10065673
284 Ga0105241_10232421
285 Ga0105241_10243304
286 Ga0105241_10582242
287 Ga0105242_10042501
288 Ga0105242_10134619
289 Ga0105242_10163038
290 Ga0105248_10062205
291 Ga0105237_10040946
292 Ga0105238_10080732
293 Ga0105238_10178902
294 Ga0105238_10235219
295 Ga0105249_10083942
296 Ga0105239_10309142
297 Ga0105239_10457616
298 Ga0157371_10043951
299 Ga0157370_10124269
300 Ga0157374_10134622
301 Ga0157378_10071951
302 Ga0157378_10610402
303 Ga0163162_10014669
304 Ga0163162_10044721
305 Ga0157372_10781006
306 Ga0157375_10111780
307 Ga0163163_10000016
308 Ga0163163_10248738
309 Ga0157379_10000131
310 Ga0157379_10001242
311 Ga0157379_10492401
312 Ga0213871_10007604
313 Ga0209233_1000006
314 Ga0209758_1000032
315 Ga0209758_1000538
316 Ga0207688_10142516
317 Ga0207680_10035438
318 Ga0207705_10013675
319 Ga0207654_10222577
320 Ga0207695_10051728
321 Ga0207695_10369188
322 Ga0207695_10410989
323 Ga0207693_10072991
324 Ga0207693_10379795
325 Ga0207694_10062594
326 Ga0207659_10057208
327 Ga0207700_10532561
328 Ga0207644_10330446
329 Ga0207706_10024956
330 Ga0207686_10011869
331 Ga0207665_10136295
332 Ga0207711_10007386
333 Ga0207689_10027154
334 Ga0207661_10140064
335 Ga0207667_10209133
336 Ga0207667_10299561
337 Ga0207651_10077086
338 Ga0207668_10226680
339 Ga0207677_10055024
340 Ga0207677_10277142
341 Ga0207703_10106175
342 Ga0207703_10121129
343 Ga0207639_10216697
344 Ga0207702_10199714
345 Ga0207648_10187359
346 Ga0207674_10327850
347 Ga0207675_100087035
348 Ga0207683_10002537
349 Ga0207683_10026235
350 Ga0207698_10307717
351 Ga0268266_10001197
352 Ga0268266_10056371
353 Ga0268266_10090470
354 Ga0265318_10002820
355 Ga0265338_10006734
356 Ga0265338_10020121
357 Ga0265338_10082594
358 Ga0265325_10009845
359 Ga0265325_10046056
360 Ga0265340_10015328
361 Ga0265331_10000956
362 Ga0265316_10056620
363 Ga0265313_10001228
364 Ga0265313_10007230
365 Ga0265313_10020749
366 Ga0316579_10006101
367 Ga0265314_10001388
368 Ga0265314_10008513
369 Ga0265314_10124106
370 Ga0265342_10178485
371 Ga0307516_10158834
372 Ga0307412_10169982
373 Ga0373939_0016645
374 Ga0373954_0152295
375 Ga0373957_0060585
376 Ga0373960_0036062
377 Ga0373955_0007716
378 Ga0373937_0027462
379 Ga0395898_0069842
380 Ga0395905_0621704
381 Ga0395901_0183419
382 Ga0436365_0124297
383 Ga0436360_1146606
384 Ga0436363_1695597
385 Ga0436362_1134141
386 Ga0451849_0939427
387 Ga0439464_0046325
388 Ga0466963_0004913
389 Ga0466963_0165051
390 Ga0466957_0039333
391 Ga0466967_0004481
392 Ga0466967_0106336
393 Ga0495629_0161991
394 Ga0495583_0007856
395 Ga0495608_0051514
396 Ga0495609_0009531
397 Ga0495621_0012445
398 Ga0495622_0022220
399 Ga0495667_0032296
400 Ga0495635_0030423
401 Ga0495657_0087627
402 Ga0495658_0043393
403 Ga0495600_0187090
404 Ga0495604_0011244
405 Ga0495680_0008347
406 Ga0495593_0041451
407 Ga0496121_0003690
408 Ga0496121_0335690
409 Ga0496126_0291505
410 Ga0501033_0004484
411 Ga0501033_0016237
412 Ga0501034_0088636
413 Ga0501034_0161063
414 Ga0501036_0208825
415 Ga0501037_0104697
416 Ga0501037_0104778
417 Ga0501046_0032739
418 Ga0501047_0002583
419 Ga0501047_0009833
420 Ga0501047_0013990
421 Ga0501047_0045166
422 Ga0501047_0083720
423 Ga0501069_0016344
424 Ga0501070_0025968
425 Ga0501070_0049732
426 Ga0501070_0059320
427 Ga0501071_0047958
428 Ga0501073_0294974
429 Ga0501080_0038614
430 Ga0501035_0000581
431 Ga0501035_0010387
432 Ga0501035_0062573
433 Ga0501044_0001058
434 Ga0501044_0032140
435 Ga0501044_0202790
436 nmdc:mga05p37_290_c1
437 nmdc:mga09592_2994_c1
438 nmdc:mga0qj67_2739_c1
439 nmdc:mga06r32_2029_c1
440 nmdc:mga08y16_844_c1
441 nmdc:mga0n895_20783_c1
442 nmdc:mga0n895_22082_c1
443 nmdc:mga0rr50_75708_c1
444 nmdc:mga0a205_9541_c1
445 Ga0495601_0001939
446 Ga0495619_0000259
447 Ga0500643_000008
448 Ga0500643_002781
449 Ga0500644_0003941
450 Ga0500641_0036798
451 Ga0500555_052966
452 Ga0500595_000001
453 Ga0500595_000627
454 Ga0500595_006545
455 Ga0500652_046960
456 Ga0500573_0000051
457 Ga0500577_0085390
458 Ga0500616_0000001
459 Ga0500645_000189
460 Ga0501082_0002277
461 2585233332
462 8018129494

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01379

Porphobil_deam

Porphobilinogen deaminase, dipyromethane cofactor binding domain

11

220

0.96

PF03900

Porphobil_deamC

Porphobilinogen deaminase, C-terminal domain

231

307

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ypn-assembly1.cif.gz_A hydroxymethylbilane synthase 0.9715 1 306
5h6o-assembly1.cif.gz_A porphobilinogen deaminase from vibrio cholerae 0.9663 1 299
1pda-assembly1.cif.gz_A structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site 0.9617 1 307
1ypn-assembly1.cif.gz_A reduced form hydroxymethylbilane synthase (k59q mutant) crystal structure after 2 hours in a flow cell determined by time-resolved laue diffraction 0.9611 1 307
1ah5-assembly1.cif.gz_A reduced form selenomethionine-labelled hydroxymethylbilane synthase determined by mad 0.9498 1 309
ID Description Score Start End Superfamily
4htgA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9837 96 195 3.40.190.10
1ah5A02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9737 96 195 3.40.190.10
4htgA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9647 96 195 3.40.190.10
1ah5A02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9643 96 195 3.40.190.10
af_C6TEP8_269_355_3.30.160.40 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Porphobilinogen deaminase, C-terminal domain 0.9347 219 303 3.30.160.40
ID Description Score Start End GO Terms
AF-A0A382XJN5-F1-model_v4 hydroxymethylbilane synthase (EC 2.5.1.61) 0.9812 1 206 GO:0004418
GO:0005737
GO:0006783
AF-A0A1Q3K954-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.9801 1 218 GO:0004418
GO:0005737
GO:0006782
AF-A0A2N3E9G9-F1-model_v4 Hydroxymethylbilane synthase (EC 2.5.1.61) 0.9787 53 303 GO:0004418
GO:0005737
GO:0006782
AF-A0A1M7N7N2-F1-model_v4 Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) 0.9782 1 305 GO:0004418
GO:0005737
GO:0006782
AF-A0A257HC29-F1-model_v4 Porphobilinogen deaminase (PBG) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) 0.9772 1 303 GO:0004418
GO:0005737
GO:0006782

Map