F343585
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 230 | 185 | 460 | 572 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|8055157932|8055162905 |
| Length | 681 |
| Sequence | VLPGPEAEKVWSLWSLSFVDGVIRGQSVCRCGGWRTLGRGWWRSRWPSVADRWAPGVAFARPGPAFYSVGVRAGPLDRRPRPTGSGAPARPLRAWQQAALEIYRARSASGARDFLAVATPGAGKTTFALQIAADLLAAGEISRITVVAPTEHLKRQWAAAASEVGIDLDPDFRNAAGATSSDYTGVAVTYAQVAAHPALHRVRTGARRTLVILDEIHHAGDALSWGEAVREAFAPATRRLALTGTPFRSDVNPIPFVTYLPGTDGVLRSIADSSYGYADALRDGVVRPVLFLAYSGEMSWRTSAGAELSARLGEPLTSDQTAAAWRTALDPRGDWMPAVLAAADTRLSQVRAGGMPDAGGLVIATDHATARAYAGMLARLTGSSPSVILSDDPTASSKIENFRRSTDRWMVAVRMVSEGVDVPRLAVGVYATSASTPLFFAQAVGRFVRGRGRGETASVFLPSVPSLLGLAGEMEVQRDHALEKSPRDPDAFDDDALREANRRRDAPDQPDTLFTALGSSAHLDRVIFDGGEFGTPAASGSVEEEDFLGLPGLLEPDQVATLLRQRQAAQQAAARREAAKSPGQPQPVVPTARTGTGAAGVAGAGASAGMDEDGATRPKHEIIAELRRELNRLVGMHFHRTGKPHGMIHAELRRSCGGPPSGQATAAQLQARIDTVRRWAS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 12 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 13 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 14 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 15 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 16 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 17 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 18 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 19 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 27 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 44 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 45 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 46 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 47 | 3300028653 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG | Metagenome | Rhizosphere |
| 48 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 49 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 50 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 51 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 52 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 53 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 54 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 55 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 56 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 57 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 58 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 59 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 60 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 61 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 62 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 63 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 64 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 65 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 66 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 67 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 68 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 69 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 70 | 3300041443 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG | Metagenome | Rhizoplane |
| 71 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 72 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 73 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 74 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 75 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 76 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 77 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 78 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 79 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 80 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 81 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 82 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 86 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 87 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 88 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 89 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 90 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 91 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 92 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 93 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 94 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 95 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 96 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 97 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 98 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 99 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 100 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 101 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 102 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 103 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 113 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 114 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 115 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 117 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 118 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 119 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 120 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 121 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 122 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 123 | 8055157932 | Frankia umida Ag45/Mut15 | Isolate | Nodule |
| 124 | 2506783011 | Frankia datiscae Dg1 | Isolate | Nodule |
| 125 | 2508501039 | Frankia saprophytica CN3 | Isolate | Nodule |
| 126 | 2517572101 | Frankia sp. DC12 | Isolate | Nodule |
| 127 | 2527291627 | Frankia casuarinae Thr | Isolate | Nodule |
| 128 | 2527291629 | Frankia sp. BMG5.23 | Isolate | Nodule |
| 129 | 2546825537 | Frankia sp. CcI6 | Isolate | Rhizoplane |
| 130 | 2547132424 | Nocardia nova SH22a | Isolate | Unclassified |
| 131 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 132 | 2576861822 | Frankia sp. CeD | Isolate | Nodule |
| 133 | 2579778521 | Frankia torreyi CpI1-S | Isolate | Unclassified |
| 134 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 135 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 136 | 2619618881 | Frankia sp. ACN1ag | Isolate | Unclassified |
| 137 | 2619619003 | Frankia sp. CpI1-P | Isolate | Nodule |
| 138 | 2626541554 | Frankia sp. AvcI.1 | Isolate | Nodule |
| 139 | 2643221572 | Leifsonia sp. Root60 | Isolate | Unclassified |
| 140 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 141 | 2643221697 | Aeromicrobium sp. Root495 | Isolate | Unclassified |
| 142 | 2671180195 | Frankia sp. CcI49 | Isolate | Nodule |
| 143 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 144 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 145 | 2684623036 | Frankia sp. CgIM4 | Isolate | Nodule |
| 146 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 147 | 2687453743 | Frankia colletiae Cc1.17 | Isolate | Nodule |
| 148 | 2710264753 | Frankia sp. KB5 | Isolate | Nodule |
| 149 | 2731639228 | Motilibacter peucedani DSM 45328 | Isolate | Rhizosphere |
| 150 | 2739367653 | Kocuria sp. OV113 | Isolate | Unclassified |
| 151 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 152 | 2773857922 | Frankia sp. CcI49 | Isolate | Nodule |
| 153 | 2773857924 | Frankia sp. CgIS1 | Isolate | Nodule |
| 154 | 2773857933 | Frankia sp. BMG5.30 | Isolate | Nodule |
| 155 | 2784132109 | Dermacoccus sp. DS28 SAI-028 | Isolate | Unclassified |
| 156 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 157 | 2799112218 | Motilibacter rhizosphaerae DSM 45622 | Isolate | Rhizosphere |
| 158 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 159 | 2816332139 | Pseudonocardia kunmingensis DSM 45301 | Isolate | Unclassified |
| 160 | 2816332305 | Kocuria rhizophila FDAARGOS_302 | Isolate | Rhizosphere |
| 161 | 2852643534 | Leifsonia sp. AK011 | Isolate | Rhizosphere |
| 162 | 2852677369 | Pseudoclavibacter sp. JAI123 | Isolate | Rhizosphere |
| 163 | 2856741275 | Microbispora triticiradicis NEAU-HRDPA2-9 | Isolate | Unclassified |
| 164 | 2857727296 | Kocuria sp. R-72562 | Isolate | Unclassified |
| 165 | 2857733635 | Salinibacterium sp. R-73062 | Isolate | Unclassified |
| 166 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 167 | 2873314349 | Sphaerisporangium siamense DSM 45784 | Isolate | Rhizosphere |
| 168 | 2891562705 | Microbispora tritici MT50 | Isolate | Unclassified |
| 169 | 2895880812 | Frankia sp. BMG5.11 | Isolate | Unclassified |
| 170 | 2902792274 | Mycolicibacterium sp. P9-64 | Isolate | Unclassified |
| 171 | 2915768154 | Amycolatopsis pittospori PIP199 | Isolate | Unclassified |
| 172 | 2917736166 | Amycolatopsis dendrobii DR6-1 | Isolate | Unclassified |
| 173 | 2919713450 | Nocardia kruczakiae 4272 | Isolate | Rhizosphere |
| 174 | 2929212328 | Mycolicibacterium sp. R-73050 Hybrid assembly | Isolate | Unclassified |
| 175 | 2935390628 | Streptomyces sp. PvR034 | Isolate | Rhizosphere |
| 176 | 2984592036 | Aeromicrobium sp. SORGH_AS981 | Isolate | Aerial Root |
| 177 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 178 | 637000116 | Frankia casuarinae CcI3 | Isolate | Nodule |
| 179 | 8002784119 | Frankia sp. AgB1.9 | Isolate | Nodule |
| 180 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 181 | 8054913762 | Frankia gtarii Agncl-10 | Isolate | Nodule |
| 182 | 8054920844 | Frankia tisae Agncl-8 | Isolate | Nodule |
| 183 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 184 | 8055172936 | Sphaerisporangium perillae NEAU-ZS1 | Isolate | Unclassified |
| 185 | 8056054917 | Glycomyces luteolus NEAU-A15 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 72.17 |
| Metatranscriptomes | 0.43 |
| Isolates | 27.39 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.43 |
| Bulb | 0 |
| Endosphere | 5.65 |
| Nodule | 10 |
| Rhizoplane | 7.39 |
| Rhizosphere | 56.96 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10000551 | 3300005327 | Bacteria | 32501 |
| 2 | Ga0070658_10012779 | 3300005327 | Bacteria | 6736 |
| 3 | Ga0070658_10055810 | 3300005327 | Bacteria | 3210 |
| 4 | Ga0070683_100078040 | 3300005329 | Bacteria | 3097 |
| 5 | Ga0070683_100120675 | 3300005329 | Bacteria | 2476 |
| 6 | Ga0070680_100045352 | 3300005336 | Bacteria | 3574 |
| 7 | Ga0070660_100065296 | 3300005339 | Bacteria | 2832 |
| 8 | Ga0070671_100006307 | 3300005355 | Bacteria | 9458 |
| 9 | Ga0070714_100010336 | 3300005435 | Bacteria | 7375 |
| 10 | Ga0070714_100066462 | 3300005435 | Bacteria | 3107 |
| 11 | Ga0070710_10000859 | 3300005437 | Bacteria | 14584 |
| 12 | Ga0070663_100001740 | 3300005455 | Bacteria | 12101 |
| 13 | Ga0070679_100058019 | 3300005530 | Bacteria | 3858 |
| 14 | Ga0070684_100056366 | 3300005535 | Bacteria | 3429 |
| 15 | Ga0068857_100008578 | 3300005577 | Bacteria | 8841 |
| 16 | Ga0068859_100000042 | 3300005617 | Bacteria | 158982 |
| 17 | Ga0068859_100009445 | 3300005617 | Bacteria | 9849 |
| 18 | Ga0068863_100001046 | 3300005841 | Bacteria | 27696 |
| 19 | Ga0068863_100010247 | 3300005841 | Bacteria | 9111 |
| 20 | Ga0068858_100003935 | 3300005842 | Bacteria | 14665 |
| 21 | Ga0068862_100000623 | 3300005844 | Bacteria | 36811 |
| 22 | Ga0081455_10000105 | 3300005937 | Bacteria | 93356 |
| 23 | Ga0075369_10016493 | 3300006186 | Bacteria | 2982 |
| 24 | Ga0097620_100000042 | 3300006931 | Bacteria | 158982 |
| 25 | Ga0097620_100009445 | 3300006931 | Bacteria | 9849 |
| 26 | Ga0105240_10202430 | 3300009093 | Bacteria | 2326 |
| 27 | Ga0105248_10000153 | 3300009177 | Bacteria | 80607 |
| 28 | Ga0105249_10011486 | 3300009553 | Bacteria | 7779 |
| 29 | Ga0105239_10051133 | 3300010375 | Bacteria | 4530 |
| 30 | Ga0157371_10002043 | 3300013102 | Bacteria | 19896 |
| 31 | Ga0157370_10002992 | 3300013104 | Bacteria | 20075 |
| 32 | Ga0157370_10024146 | 3300013104 | Bacteria | 6025 |
| 33 | Ga0157369_10012174 | 3300013105 | Bacteria | 9764 |
| 34 | Ga0157369_10042323 | 3300013105 | Bacteria | 4969 |
| 35 | Ga0157369_10056551 | 3300013105 | Bacteria | 4233 |
| 36 | Ga0206353_10740028 | 3300020082 | Bacteria | 7775 |
| 37 | Ga0207692_10000119 | 3300025898 | Bacteria | 23657 |
| 38 | Ga0207705_10000006 | 3300025909 | Bacteria | 657147 |
| 39 | Ga0207705_10032715 | 3300025909 | Bacteria | 3717 |
| 40 | Ga0207660_10069171 | 3300025917 | Bacteria | 2562 |
| 41 | Ga0207657_10015265 | 3300025919 | Bacteria | 7449 |
| 42 | Ga0207657_10041467 | 3300025919 | Bacteria | 4070 |
| 43 | Ga0207652_10013325 | 3300025921 | Bacteria | 6658 |
| 44 | Ga0207664_10022135 | 3300025929 | Bacteria | 4741 |
| 45 | Ga0207690_10047624 | 3300025932 | Bacteria | 2846 |
| 46 | Ga0207711_10001205 | 3300025941 | Bacteria | 24479 |
| 47 | Ga0207711_10047614 | 3300025941 | Bacteria | 3666 |
| 48 | Ga0207661_10167646 | 3300025944 | Bacteria | 1910 |
| 49 | Ga0207667_10059288 | 3300025949 | Bacteria | 4009 |
| 50 | Ga0207668_10002713 | 3300025972 | Bacteria | 10363 |
| 51 | Ga0207703_10000856 | 3300026035 | Bacteria | 29865 |
| 52 | Ga0207703_10014252 | 3300026035 | Bacteria | 6200 |
| 53 | Ga0207678_10006135 | 3300026067 | Bacteria | 10694 |
| 54 | Ga0207678_10017371 | 3300026067 | Bacteria | 6317 |
| 55 | Ga0207678_10061161 | 3300026067 | Bacteria | 3239 |
| 56 | Ga0207641_10001321 | 3300026088 | Bacteria | 24537 |
| 57 | Ga0207641_10089731 | 3300026088 | Bacteria | 2687 |
| 58 | Ga0207674_10013680 | 3300026116 | Bacteria | 8989 |
| 59 | Ga0268265_10000066 | 3300028380 | Bacteria | 142517 |
| 60 | Ga0265326_10004780 | 3300028558 | Bacteria | 4303 |
| 61 | Ga0265319_1003461 | 3300028563 | Bacteria | 8216 |
| 62 | Ga0265334_10000269 | 3300028573 | Bacteria | 29271 |
| 63 | Ga0265318_10010488 | 3300028577 | Bacteria | 4033 |
| 64 | Ga0265323_10002446 | 3300028653 | Bacteria | 8505 |
| 65 | Ga0265336_10000910 | 3300028666 | Bacteria | 15028 |
| 66 | Ga0307515_10073721 | 3300028794 | Bacteria | 4581 |
| 67 | Ga0265338_10000246 | 3300028800 | Bacteria | 99261 |
| 68 | Ga0265338_10001142 | 3300028800 | Bacteria | 43907 |
| 69 | Ga0265338_10011915 | 3300028800 | Bacteria | 9981 |
| 70 | Ga0265332_10000374 | 3300031238 | Bacteria | 33092 |
| 71 | Ga0265320_10010222 | 3300031240 | Bacteria | 5602 |
| 72 | Ga0265340_10014829 | 3300031247 | Bacteria | 4060 |
| 73 | Ga0265339_10007639 | 3300031249 | Bacteria | 6962 |
| 74 | Ga0307513_10078405 | 3300031456 | Bacteria | 3417 |
| 75 | Ga0265313_10008468 | 3300031595 | Bacteria | 6823 |
| 76 | Ga0307514_10030042 | 3300031649 | Bacteria | 4363 |
| 77 | Ga0265314_10024566 | 3300031711 | Bacteria | 4565 |
| 78 | Ga0265342_10001544 | 3300031712 | Bacteria | 21279 |
| 79 | Ga0307518_10000204 | 3300031838 | Bacteria | 44840 |
| 80 | Ga0307410_10062263 | 3300031852 | Bacteria | 2556 |
| 81 | Ga0307409_100012607 | 3300031995 | Bacteria | 5395 |
| 82 | Ga0307507_10051053 | 3300033179 | Bacteria | 3984 |
| 83 | Ga0373926_0001614 | 3300035083 | Bacteria | 6947 |
| 84 | Ga0373935_0001369 | 3300035692 | Bacteria | 13465 |
| 85 | Ga0373947_0000018 | 3300035725 | Bacteria | 114087 |
| 86 | Ga0373925_0000384 | 3300037068 | Bacteria | 45543 |
| 87 | Ga0436364_0223689 | 3300037853 | Bacteria | 3710 |
| 88 | Ga0439436_0008441 | 3300041404 | Bacteria | 3167 |
| 89 | Ga0451789_1188433 | 3300041443 | Bacteria | 2323 |
| 90 | Ga0466969_0002810 | 3300044656 | Bacteria | 9301 |
| 91 | Ga0466969_0011929 | 3300044656 | Bacteria | 4595 |
| 92 | Ga0466972_0001393 | 3300044658 | Bacteria | 11710 |
| 93 | Ga0466972_0032050 | 3300044658 | Bacteria | 2582 |
| 94 | Ga0466972_0037649 | 3300044658 | Bacteria | 2365 |
| 95 | Ga0466966_0001401 | 3300044684 | Bacteria | 15506 |
| 96 | Ga0466966_0103184 | 3300044684 | Bacteria | 1762 |
| 97 | Ga0466961_0024551 | 3300044693 | Bacteria | 3878 |
| 98 | Ga0466961_0042593 | 3300044693 | Bacteria | 2910 |
| 99 | Ga0466964_0008221 | 3300044706 | Bacteria | 3914 |
| 100 | Ga0466971_0008254 | 3300044719 | Bacteria | 4543 |
| 101 | Ga0466971_0009929 | 3300044719 | Bacteria | 4159 |
| 102 | Ga0466970_0001033 | 3300044765 | Bacteria | 13441 |
| 103 | Ga0466970_0008385 | 3300044765 | Bacteria | 5199 |
| 104 | Ga0466970_0015054 | 3300044765 | Bacteria | 3978 |
| 105 | Ga0466970_0024504 | 3300044765 | Bacteria | 3155 |
| 106 | Ga0466970_0041830 | 3300044765 | Bacteria | 2436 |
| 107 | Ga0466957_0015192 | 3300044842 | Bacteria | 4495 |
| 108 | Ga0466957_0022512 | 3300044842 | Bacteria | 3719 |
| 109 | Ga0466959_0005539 | 3300045049 | Bacteria | 8664 |
| 110 | Ga0466959_0033664 | 3300045049 | Bacteria | 3789 |
| 111 | Ga0466958_0034014 | 3300045836 | Bacteria | 3039 |
| 112 | Ga0466967_0004328 | 3300045976 | Bacteria | 9549 |
| 113 | Ga0466967_0085589 | 3300045976 | Bacteria | 2854 |
| 114 | Ga0466967_0109078 | 3300045976 | Bacteria | 2541 |
| 115 | Ga0466967_0113193 | 3300045976 | Bacteria | 2496 |
| 116 | Ga0495590_0000109 | 3300046457 | Bacteria | 50065 |
| 117 | Ga0495648_0025218 | 3300046524 | Bacteria | 4030 |
| 118 | Ga0495672_0027607 | 3300047320 | Bacteria | 3604 |
| 119 | Ga0496101_0036374 | 3300048904 | Bacteria | 3487 |
| 120 | Ga0496102_0102690 | 3300048905 | Bacteria | 2658 |
| 121 | Ga0496104_0039572 | 3300048907 | Bacteria | 4414 |
| 122 | Ga0496105_0015099 | 3300048908 | Bacteria | 6147 |
| 123 | Ga0496108_0082207 | 3300048911 | Bacteria | 2731 |
| 124 | Ga0496109_0031175 | 3300048912 | Bacteria | 4783 |
| 125 | Ga0496109_0129919 | 3300048912 | Bacteria | 2350 |
| 126 | Ga0496110_0117981 | 3300048913 | Bacteria | 2389 |
| 127 | Ga0496112_0004591 | 3300048915 | Bacteria | 11744 |
| 128 | Ga0496112_0031669 | 3300048915 | Bacteria | 5131 |
| 129 | Ga0496113_0054277 | 3300048916 | Bacteria | 2999 |
| 130 | Ga0496113_0118355 | 3300048916 | Bacteria | 2069 |
| 131 | Ga0496114_0067719 | 3300048917 | Bacteria | 2995 |
| 132 | Ga0496114_0074582 | 3300048917 | Bacteria | 2856 |
| 133 | Ga0496114_0092925 | 3300048917 | Bacteria | 2564 |
| 134 | Ga0496116_0000150 | 3300048919 | Bacteria | 141440 |
| 135 | Ga0496118_0011577 | 3300048921 | Bacteria | 8592 |
| 136 | Ga0496118_0032011 | 3300048921 | Bacteria | 4344 |
| 137 | Ga0496119_0002359 | 3300048922 | Bacteria | 20786 |
| 138 | Ga0496121_0025143 | 3300048924 | Bacteria | 5664 |
| 139 | Ga0496122_0001498 | 3300048925 | Bacteria | 37313 |
| 140 | Ga0496122_0045683 | 3300048925 | Bacteria | 3401 |
| 141 | Ga0496123_0012196 | 3300048926 | Bacteria | 7355 |
| 142 | Ga0496123_0020404 | 3300048926 | Bacteria | 5185 |
| 143 | Ga0496124_0082449 | 3300048927 | Bacteria | 2640 |
| 144 | Ga0496126_0066234 | 3300048929 | Bacteria | 3230 |
| 145 | Ga0501033_0005466 | 3300049570 | Bacteria | 10061 |
| 146 | Ga0501034_0005804 | 3300049571 | Bacteria | 13423 |
| 147 | Ga0501036_0022918 | 3300049572 | Bacteria | 5257 |
| 148 | Ga0501039_0003575 | 3300049575 | Bacteria | 11650 |
| 149 | Ga0501043_0004400 | 3300049579 | Bacteria | 11444 |
| 150 | Ga0501070_0003561 | 3300049586 | Bacteria | 13470 |
| 151 | Ga0501073_0000157 | 3300049589 | Bacteria | 44874 |
| 152 | Ga0501074_0006546 | 3300049590 | Bacteria | 8417 |
| 153 | Ga0501035_0140698 | 3300049822 | Bacteria | 2098 |
| 154 | nmdc:mga00v17_6285_c1 | 3300050491 | Bacteria | 6297 |
| 155 | nmdc:mga0yw44_4991_c1 | 3300050492 | Bacteria | 6194 |
| 156 | nmdc:mga0sz30_25321_c1 | 3300050516 | Bacteria | 2426 |
| 157 | Ga0495619_0013466 | 3300053085 | Bacteria | 5152 |
| 158 | Ga0500643_000082 | 3300053087 | Bacteria | 101189 |
| 159 | Ga0500643_002061 | 3300053087 | Bacteria | 10744 |
| 160 | Ga0500556_0000001 | 3300053104 | Bacteria | 1135060 |
| 161 | Ga0500559_0001048 | 3300053136 | Bacteria | 16894 |
| 162 | Ga0500559_0009973 | 3300053136 | Bacteria | 4092 |
| 163 | Ga0500568_0000016 | 3300053139 | Bacteria | 217194 |
| 164 | Ga0500568_0001331 | 3300053139 | Bacteria | 16180 |
| 165 | Ga0500573_0000017 | 3300053140 | Bacteria | 181426 |
| 166 | Ga0500616_0007956 | 3300053153 | Bacteria | 6656 |
| 167 | Ga0466962_0009299 | 3300061719 | Bacteria | 4708 |
| 168 | 8055162905 | 8055157932 | Bacteria | 6429399 |
| 169 | 2506867093 | 2506783011 | Bacteria | 5323186 |
| 170 | 2508675783 | 2508501039 | Bacteria | 9978592 |
| 171 | 2517763868 | 2517572101 | Bacteria | 6884336 |
| 172 | 2528203199 | 2527291627 | Bacteria | 5309833 |
| 173 | 2528213046 | 2527291629 | Bacteria | 5267418 |
| 174 | 2546949262 | 2546825537 | Bacteria | 5389291 |
| 175 | 2548697582 | 2547132424 | Bacteria | 8348532 |
| 176 | 2559430119 | 2558860280 | Bacteria | 11429938 |
| 177 | 2579748034 | 2576861822 | Bacteria | 5004595 |
| 178 | 2579852876 | 2579778521 | Bacteria | 7624758 |
| 179 | 2583149689 | 2582580736 | Bacteria | 5325865 |
| 180 | 2586062512 | 2585427649 | Bacteria | 9053857 |
| 181 | 2619854050 | 2619618881 | Bacteria | 7521104 |
| 182 | 2620348974 | 2619619003 | Bacteria | 7619552 |
| 183 | 2626638400 | 2626541554 | Bacteria | 7741902 |
| 184 | 2643875286 | 2643221572 | Bacteria | 3614809 |
| 185 | 2644457956 | 2643221681 | Bacteria | 3707866 |
| 186 | 2644536790 | 2643221697 | Bacteria | 3575694 |
| 187 | 2671832908 | 2671180195 | Bacteria | 9757215 |
| 188 | 2676200896 | 2675902999 | Bacteria | 9438463 |
| 189 | 2686536040 | 2684623035 | Bacteria | 8032739 |
| 190 | 2686544914 | 2684623036 | Bacteria | 5199090 |
| 191 | 2689962676 | 2687453737 | Bacteria | 11203906 |
| 192 | 2689991110 | 2687453743 | Bacteria | 8361025 |
| 193 | 2710602027 | 2710264753 | Bacteria | 5455564 |
| 194 | 2731908464 | 2731639228 | Bacteria | 4187555 |
| 195 | 2739602641 | 2739367653 | Bacteria | 2780952 |
| 196 | 2774845474 | 2773857921 | Bacteria | 9435764 |
| 197 | 2774851064 | 2773857922 | Bacteria | 9757215 |
| 198 | 2774863527 | 2773857924 | Bacteria | 5256821 |
| 199 | 2774903947 | 2773857933 | Bacteria | 5818019 |
| 200 | 2784472694 | 2784132109 | Bacteria | 3141763 |
| 201 | 2793984030 | 2791355406 | Bacteria | 11364898 |
| 202 | 2799184585 | 2799112218 | Bacteria | 4315149 |
| 203 | 2809588310 | 2808606522 | Bacteria | 9488490 |
| 204 | 2816503897 | 2816332139 | Bacteria | 9138787 |
| 205 | 2817508886 | 2816332305 | Bacteria | 2697803 |
| 206 | 2852645402 | 2852643534 | Bacteria | 3013378 |
| 207 | 2852679450 | 2852677369 | Bacteria | 3768884 |
| 208 | 2856742148 | 2856741275 | Bacteria | 8096094 |
| 209 | 2857728594 | 2857727296 | Bacteria | 2745552 |
| 210 | 2857735586 | 2857733635 | Bacteria | 3532004 |
| 211 | 2866618410 | 2866612099 | Bacteria | 7543886 |
| 212 | 2873321623 | 2873314349 | Bacteria | 8512634 |
| 213 | 2891565707 | 2891562705 | Bacteria | 8039471 |
| 214 | 2895887241 | 2895880812 | Bacteria | 11255272 |
| 215 | 2902794437 | 2902792274 | Bacteria | 7270173 |
| 216 | 2915771367 | 2915768154 | Bacteria | 8424322 |
| 217 | 2917741518 | 2917736166 | Bacteria | 9690793 |
| 218 | 2919719531 | 2919713450 | Bacteria | 7431245 |
| 219 | 2929213183 | 2929212328 | Bacteria | 7708288 |
| 220 | 2935396299 | 2935390628 | Bacteria | 7043367 |
| 221 | 2984595528 | 2984592036 | Bacteria | 3670284 |
| 222 | 2997601670 | 2997600082 | Bacteria | 9896405 |
| 223 | 637878717 | 637000116 | Bacteria | 5433628 |
| 224 | 8002790070 | 8002784119 | Bacteria | 9788632 |
| 225 | 8003316886 | 8003314358 | Bacteria | 10575343 |
| 226 | 8054916471 | 8054913762 | Bacteria | 7713009 |
| 227 | 8054921189 | 8054920844 | Bacteria | 7068637 |
| 228 | 8055071086 | 8055066027 | Bacteria | 9479577 |
| 229 | 8055173585 | 8055172936 | Bacteria | 9305943 |
| 230 | 8056055457 | 8056054917 | Bacteria | 5736694 |
| 231 | Ga0070658_10000551 | |||
| 232 | Ga0070658_10012779 | |||
| 233 | Ga0070658_10055810 | |||
| 234 | Ga0070683_100078040 | |||
| 235 | Ga0070683_100120675 | |||
| 236 | Ga0070680_100045352 | |||
| 237 | Ga0070660_100065296 | |||
| 238 | Ga0070671_100006307 | |||
| 239 | Ga0070714_100010336 | |||
| 240 | Ga0070714_100066462 | |||
| 241 | Ga0070710_10000859 | |||
| 242 | Ga0070663_100001740 | |||
| 243 | Ga0070679_100058019 | |||
| 244 | Ga0070684_100056366 | |||
| 245 | Ga0068857_100008578 | |||
| 246 | Ga0068859_100000042 | |||
| 247 | Ga0068859_100009445 | |||
| 248 | Ga0068863_100001046 | |||
| 249 | Ga0068863_100010247 | |||
| 250 | Ga0068858_100003935 | |||
| 251 | Ga0068862_100000623 | |||
| 252 | Ga0081455_10000105 | |||
| 253 | Ga0075369_10016493 | |||
| 254 | Ga0097620_100000042 | |||
| 255 | Ga0097620_100009445 | |||
| 256 | Ga0105240_10202430 | |||
| 257 | Ga0105248_10000153 | |||
| 258 | Ga0105249_10011486 | |||
| 259 | Ga0105239_10051133 | |||
| 260 | Ga0157371_10002043 | |||
| 261 | Ga0157370_10002992 | |||
| 262 | Ga0157370_10024146 | |||
| 263 | Ga0157369_10012174 | |||
| 264 | Ga0157369_10042323 | |||
| 265 | Ga0157369_10056551 | |||
| 266 | Ga0206353_10740028 | |||
| 267 | Ga0207692_10000119 | |||
| 268 | Ga0207705_10000006 | |||
| 269 | Ga0207705_10032715 | |||
| 270 | Ga0207660_10069171 | |||
| 271 | Ga0207657_10015265 | |||
| 272 | Ga0207657_10041467 | |||
| 273 | Ga0207652_10013325 | |||
| 274 | Ga0207664_10022135 | |||
| 275 | Ga0207690_10047624 | |||
| 276 | Ga0207711_10001205 | |||
| 277 | Ga0207711_10047614 | |||
| 278 | Ga0207661_10167646 | |||
| 279 | Ga0207667_10059288 | |||
| 280 | Ga0207668_10002713 | |||
| 281 | Ga0207703_10000856 | |||
| 282 | Ga0207703_10014252 | |||
| 283 | Ga0207678_10006135 | |||
| 284 | Ga0207678_10017371 | |||
| 285 | Ga0207678_10061161 | |||
| 286 | Ga0207641_10001321 | |||
| 287 | Ga0207641_10089731 | |||
| 288 | Ga0207674_10013680 | |||
| 289 | Ga0268265_10000066 | |||
| 290 | Ga0265326_10004780 | |||
| 291 | Ga0265319_1003461 | |||
| 292 | Ga0265334_10000269 | |||
| 293 | Ga0265318_10010488 | |||
| 294 | Ga0265323_10002446 | |||
| 295 | Ga0265336_10000910 | |||
| 296 | Ga0307515_10073721 | |||
| 297 | Ga0265338_10000246 | |||
| 298 | Ga0265338_10001142 | |||
| 299 | Ga0265338_10011915 | |||
| 300 | Ga0265332_10000374 | |||
| 301 | Ga0265320_10010222 | |||
| 302 | Ga0265340_10014829 | |||
| 303 | Ga0265339_10007639 | |||
| 304 | Ga0307513_10078405 | |||
| 305 | Ga0265313_10008468 | |||
| 306 | Ga0307514_10030042 | |||
| 307 | Ga0265314_10024566 | |||
| 308 | Ga0265342_10001544 | |||
| 309 | Ga0307518_10000204 | |||
| 310 | Ga0307410_10062263 | |||
| 311 | Ga0307409_100012607 | |||
| 312 | Ga0307507_10051053 | |||
| 313 | Ga0373926_0001614 | |||
| 314 | Ga0373935_0001369 | |||
| 315 | Ga0373947_0000018 | |||
| 316 | Ga0373925_0000384 | |||
| 317 | Ga0436364_0223689 | |||
| 318 | Ga0439436_0008441 | |||
| 319 | Ga0451789_1188433 | |||
| 320 | Ga0466969_0002810 | |||
| 321 | Ga0466969_0011929 | |||
| 322 | Ga0466972_0001393 | |||
| 323 | Ga0466972_0032050 | |||
| 324 | Ga0466972_0037649 | |||
| 325 | Ga0466966_0001401 | |||
| 326 | Ga0466966_0103184 | |||
| 327 | Ga0466961_0024551 | |||
| 328 | Ga0466961_0042593 | |||
| 329 | Ga0466964_0008221 | |||
| 330 | Ga0466971_0008254 | |||
| 331 | Ga0466971_0009929 | |||
| 332 | Ga0466970_0001033 | |||
| 333 | Ga0466970_0008385 | |||
| 334 | Ga0466970_0015054 | |||
| 335 | Ga0466970_0024504 | |||
| 336 | Ga0466970_0041830 | |||
| 337 | Ga0466957_0015192 | |||
| 338 | Ga0466957_0022512 | |||
| 339 | Ga0466959_0005539 | |||
| 340 | Ga0466959_0033664 | |||
| 341 | Ga0466958_0034014 | |||
| 342 | Ga0466967_0004328 | |||
| 343 | Ga0466967_0085589 | |||
| 344 | Ga0466967_0109078 | |||
| 345 | Ga0466967_0113193 | |||
| 346 | Ga0495590_0000109 | |||
| 347 | Ga0495648_0025218 | |||
| 348 | Ga0495672_0027607 | |||
| 349 | Ga0496101_0036374 | |||
| 350 | Ga0496102_0102690 | |||
| 351 | Ga0496104_0039572 | |||
| 352 | Ga0496105_0015099 | |||
| 353 | Ga0496108_0082207 | |||
| 354 | Ga0496109_0031175 | |||
| 355 | Ga0496109_0129919 | |||
| 356 | Ga0496110_0117981 | |||
| 357 | Ga0496112_0004591 | |||
| 358 | Ga0496112_0031669 | |||
| 359 | Ga0496113_0054277 | |||
| 360 | Ga0496113_0118355 | |||
| 361 | Ga0496114_0067719 | |||
| 362 | Ga0496114_0074582 | |||
| 363 | Ga0496114_0092925 | |||
| 364 | Ga0496116_0000150 | |||
| 365 | Ga0496118_0011577 | |||
| 366 | Ga0496118_0032011 | |||
| 367 | Ga0496119_0002359 | |||
| 368 | Ga0496121_0025143 | |||
| 369 | Ga0496122_0001498 | |||
| 370 | Ga0496122_0045683 | |||
| 371 | Ga0496123_0012196 | |||
| 372 | Ga0496123_0020404 | |||
| 373 | Ga0496124_0082449 | |||
| 374 | Ga0496126_0066234 | |||
| 375 | Ga0501033_0005466 | |||
| 376 | Ga0501034_0005804 | |||
| 377 | Ga0501036_0022918 | |||
| 378 | Ga0501039_0003575 | |||
| 379 | Ga0501043_0004400 | |||
| 380 | Ga0501070_0003561 | |||
| 381 | Ga0501073_0000157 | |||
| 382 | Ga0501074_0006546 | |||
| 383 | Ga0501035_0140698 | |||
| 384 | nmdc:mga00v17_6285_c1 | |||
| 385 | nmdc:mga0yw44_4991_c1 | |||
| 386 | nmdc:mga0sz30_25321_c1 | |||
| 387 | Ga0495619_0013466 | |||
| 388 | Ga0500643_000082 | |||
| 389 | Ga0500643_002061 | |||
| 390 | Ga0500556_0000001 | |||
| 391 | Ga0500559_0001048 | |||
| 392 | Ga0500559_0009973 | |||
| 393 | Ga0500568_0000016 | |||
| 394 | Ga0500568_0001331 | |||
| 395 | Ga0500573_0000017 | |||
| 396 | Ga0500616_0007956 | |||
| 397 | Ga0466962_0009299 | |||
| 398 | 8055162905 | |||
| 399 | 2506867093 | |||
| 400 | 2508675783 | |||
| 401 | 2517763868 | |||
| 402 | 2528203199 | |||
| 403 | 2528213046 | |||
| 404 | 2546949262 | |||
| 405 | 2548697582 | |||
| 406 | 2559430119 | |||
| 407 | 2579748034 | |||
| 408 | 2579852876 | |||
| 409 | 2583149689 | |||
| 410 | 2586062512 | |||
| 411 | 2619854050 | |||
| 412 | 2620348974 | |||
| 413 | 2626638400 | |||
| 414 | 2643875286 | |||
| 415 | 2644457956 | |||
| 416 | 2644536790 | |||
| 417 | 2671832908 | |||
| 418 | 2676200896 | |||
| 419 | 2686536040 | |||
| 420 | 2686544914 | |||
| 421 | 2689962676 | |||
| 422 | 2689991110 | |||
| 423 | 2710602027 | |||
| 424 | 2731908464 | |||
| 425 | 2739602641 | |||
| 426 | 2774845474 | |||
| 427 | 2774851064 | |||
| 428 | 2774863527 | |||
| 429 | 2774903947 | |||
| 430 | 2784472694 | |||
| 431 | 2793984030 | |||
| 432 | 2799184585 | |||
| 433 | 2809588310 | |||
| 434 | 2816503897 | |||
| 435 | 2817508886 | |||
| 436 | 2852645402 | |||
| 437 | 2852679450 | |||
| 438 | 2856742148 | |||
| 439 | 2857728594 | |||
| 440 | 2857735586 | |||
| 441 | 2866618410 | |||
| 442 | 2873321623 | |||
| 443 | 2891565707 | |||
| 444 | 2895887241 | |||
| 445 | 2902794437 | |||
| 446 | 2915771367 | |||
| 447 | 2917741518 | |||
| 448 | 2919719531 | |||
| 449 | 2929213183 | |||
| 450 | 2935396299 | |||
| 451 | 2984595528 | |||
| 452 | 2997601670 | |||
| 453 | 637878717 | |||
| 454 | 8002790070 | |||
| 455 | 8003316886 | |||
| 456 | 8054916471 | |||
| 457 | 8054921189 | |||
| 458 | 8055071086 | |||
| 459 | 8055173585 | |||
| 460 | 8056055457 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8av6-assembly1.cif.gz_G | cryoem structure of ino80 core nucleosome complex in closed grappler conformation | 0.7933 | 30 | 190 |
| 8oo7-assembly1.cif.gz_G | cryoem structure ino80core hexasome complex composite model state1 | 0.791 | 38 | 193 |
| 4crw-assembly1.cif.gz_B | complex of human ddx6 (reca-c) and cnot1 (mif4g) | 0.7744 | 302 | 414 |
| 7xwy-assembly1.cif.gz_A | crystal structure of spfft3 n-terminal truncation | 0.7733 | 38 | 192 |
| 7zi4-assembly1.cif.gz_G | cryo-em structure of the human ino80 complex bound to a wt nucleosome | 0.7718 | 39 | 193 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WL21_221_421_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9904 | 219 | 419 | 3.40.50.300 |
| af_P9WL21_221_421_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9855 | 219 | 419 | 3.40.50.300 |
| af_P9WL21_34_204_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9833 | 38 | 202 | 3.40.50.300 |
| af_P9WL21_34_204_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9437 | 38 | 202 | 3.40.50.300 |
| 1z63B01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Tandem AAA-ATPase domain | 0.8273 | 40 | 190 | 3.40.50.10810 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A354BK49-F1-model_v4 | Helicase ATP-binding domain-containing protein | 0.9718 | 38 | 227 |
GO:0003677
GO:0005524 GO:0005829 GO:0016787 |
| AF-A0A2G6DSS2-F1-model_v4 | Helicase ATP-binding domain-containing protein | 0.9678 | 74 | 418 |
GO:0003677
GO:0005524 GO:0005829 GO:0016787 |
| AF-A0A2S8MVS3-F1-model_v4 | deleted | 0.9642 | 85 | 184 |
|
| AF-A0A2G6DSS2-F1-model_v4 | Helicase ATP-binding domain-containing protein | 0.9596 | 74 | 418 |
GO:0003677
GO:0005524 GO:0005829 GO:0016787 |
| AF-A0A358D7X6-F1-model_v4 | Helicase ATP-binding domain-containing protein | 0.9549 | 123 | 418 |
GO:0005829
|