F343550
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 230 | 203 | 146 | 311 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2875391855|2875393064 |
| Length | 373 |
| Sequence | RAPLRADRLPVRPVLAPLRAGRVFAYGATAGLVADALLGDPRRGHPVAGFGRAAARVESLLWRDDRGRGALHTLVCAGGAVGAAALAARAVRGRPALAVALTAATTWSVVGGTSLGREARAIGGALAAGDLEVARERLPHLCGRDPQALDGPGIARAVVESVAENTSDAVVGALVWGAIGGVPGLVGFRAANTLDAMVGHKSPRYRRYGWASARLDDVVGWPGARLTAALAVVSGGRPAQAVRAWKADAHRHPSPNAGPVEAAFAGALGVRLGGTLSYAGRVEHRPVLNGESGREVRGSDIERAVRLSRRVSALALGVCVAGRLVAGHLVAGLSAAGLSGVGRSGAERSDARLSVAGLSAAGLSGAAWKRGRG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2554235005 | Streptomyces violaceusniger SPC6 | Isolate | Rhizosphere |
| 2 | 2582581312 | Streptomyces atratus OK008 | Isolate | Rhizosphere |
| 3 | 2582581313 | Streptomyces mirabilis OV308 | Isolate | Rhizosphere |
| 4 | 2582581314 | Streptomyces mirabilis YR139 | Isolate | Rhizosphere |
| 5 | 2616644814 | Streptomyces mirabilis OK461 | Isolate | Rhizosphere |
| 6 | 2616644941 | Streptomyces atratus OK807 | Isolate | Rhizosphere |
| 7 | 2643221548 | Streptomyces sp. Root55 | Isolate | Unclassified |
| 8 | 2643221578 | Streptomyces sp. Root63 | Isolate | Unclassified |
| 9 | 2643221587 | Streptomyces sp. Root66D1 | Isolate | Unclassified |
| 10 | 2643221647 | Streptomyces sp. Root369 | Isolate | Unclassified |
| 11 | 2643221670 | Streptomyces sp. Root431 | Isolate | Unclassified |
| 12 | 2643221673 | Streptomyces sp. Root1295 | Isolate | Unclassified |
| 13 | 2643221677 | Streptomyces sp. Root1304 | Isolate | Unclassified |
| 14 | 2643221678 | Streptomyces sp. Root1310 | Isolate | Unclassified |
| 15 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 16 | 2643221682 | Streptomyces sp. Root1319 | Isolate | Unclassified |
| 17 | 2643221714 | Streptomyces sp. Root264 | Isolate | Unclassified |
| 18 | 2784746763 | Streptomyces ossamyceticus SAI-001 | Isolate | Unclassified |
| 19 | 2786546132 | Streptomyces sp. W SAI-097 | Isolate | Unclassified |
| 20 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 21 | 2808606359 | Streptomyces sp. RJA2910 | Isolate | Unclassified |
| 22 | 2808606375 | Streptomyces sp. SLBN-31 | Isolate | Unclassified |
| 23 | 2808606448 | Streptomyces sp. 193411 | Isolate | Unclassified |
| 24 | 2808606982 | Streptomyces sp. SLBN-118 | Isolate | Unclassified |
| 25 | 2811994879 | Streptomyces sp. 4-17 | Isolate | Unclassified |
| 26 | 2811994917 | Streptomyces sp. SLBN-134 | Isolate | Unclassified |
| 27 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 28 | 2818991463 | Streptomyces argenteolus 3259 | Isolate | Rhizosphere |
| 29 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 30 | 2862178590 | Streptomyces sp. SDr-06 | Isolate | Rhizosphere |
| 31 | 2862281513 | Streptomyces sp. Act143 | Isolate | Rhizosphere |
| 32 | 2862507626 | Streptomyces sp. NWU339 | Isolate | Unclassified |
| 33 | 2862574272 | Streptomyces sp. AcE210 | Isolate | Nodule |
| 34 | 2863404153 | Streptomyces scabiei SAI-025 (Annotation) (version 2) | Isolate | Unclassified |
| 35 | 2867369537 | Streptomyces sp. Z26 | Isolate | Unclassified |
| 36 | 2873151551 | Streptomyces silaceus ACCC40021 | Isolate | Rhizosphere |
| 37 | 2875391855 | Streptomyces cavourensis 1AS2a | Isolate | Rhizosphere |
| 38 | 2877676314 | Streptomyces griseorubiginosus 3E-1 | Isolate | Unclassified |
| 39 | 2912715099 | Streptomyces sp. Z423-1 | Isolate | Rhizosphere |
| 40 | 2912723979 | Streptomyces sp. NEAU-sy36 | Isolate | Rhizosphere |
| 41 | 2912757875 | Streptomyces sp. S4.7 | Isolate | Rhizosphere |
| 42 | 2918501144 | Streptomyces sp. PvR006 | Isolate | Rhizosphere |
| 43 | 2919468124 | Streptomyces sp. 3330 | Isolate | Rhizosphere |
| 44 | 2935390628 | Streptomyces sp. PvR034 | Isolate | Rhizosphere |
| 45 | 2946045630 | Streptomyces sp. W4I9-2 | Isolate | Rhizosphere |
| 46 | 2946064051 | Streptomyces luteogriseus W4I19-1 | Isolate | Rhizosphere |
| 47 | 2946072368 | Streptomyces achromogenes W4I19-2 | Isolate | Rhizosphere |
| 48 | 2947224130 | Streptomyces afghaniensis W1I20 | Isolate | Rhizosphere |
| 49 | 2954002825 | Streptomyces turgidiscabies W2I16 | Isolate | Rhizosphere |
| 50 | 2954380949 | Streptomyces ciscaucasicus W1I15 | Isolate | Rhizosphere |
| 51 | 2954673503 | Streptomyces sp. SAI-119 | Isolate | Rhizosphere |
| 52 | 2954682443 | Streptomyces sp. SAI-149 | Isolate | Rhizosphere |
| 53 | 2954691527 | Streptomyces sp. SAI-127 | Isolate | Rhizosphere |
| 54 | 2954701450 | Streptomyces sp. SAI-144 | Isolate | Rhizosphere |
| 55 | 2954711539 | Streptomyces sp. SAI-090 | Isolate | Rhizosphere |
| 56 | 2954721474 | Streptomyces sp. SAI-117 | Isolate | Rhizosphere |
| 57 | 2954731030 | Streptomyces sp. SAI-133 | Isolate | Rhizosphere |
| 58 | 2954740390 | Streptomyces sp. SAI-041 | Isolate | Rhizosphere |
| 59 | 2954749733 | Streptomyces sp. SAI-135 | Isolate | Rhizosphere |
| 60 | 2954759201 | Streptomyces sp. SAI-208 | Isolate | Rhizosphere |
| 61 | 2966598605 | Kitasatospora papulosa SLBN-177 | Isolate | Rhizosphere |
| 62 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 63 | 2990059506 | Streptomyces sp. CAP261 | Isolate | Unclassified |
| 64 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 65 | 2997451912 | Streptomyces piniterrae jys28 | Isolate | Rhizosphere |
| 66 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 67 | 3006321560 | Actinacidiphila epipremni PRB2-1 | Isolate | Unclassified |
| 68 | 3006425503 | Streptomyces zingiberis PLAI1-29 | Isolate | Unclassified |
| 69 | 3006486233 | Streptomyces sp. BR123 | Isolate | Rhizosphere |
| 70 | 3006493962 | Streptomyces grisecoloratus TRM S81-3 | Isolate | Rhizosphere |
| 71 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 72 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 73 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 74 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 75 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 76 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 77 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 78 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 79 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 80 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 81 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 82 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 83 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 84 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 85 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 86 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 87 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 99 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 100 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 101 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 102 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 103 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 104 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 105 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 106 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 107 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 108 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 109 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 110 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 111 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 112 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 113 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 114 | 3300042127 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 | Metagenome | Rhizosphere |
| 115 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 116 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 117 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 118 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 119 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 120 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 121 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 122 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 141 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 142 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 143 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 144 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 145 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 146 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 147 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 151 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 152 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 153 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 154 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 155 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 156 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 157 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 158 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 160 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 161 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 162 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 163 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 164 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 165 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 166 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 167 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 168 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 169 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 170 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 171 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 172 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 173 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 174 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 175 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 176 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 177 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 178 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 179 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 180 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 181 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 182 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 183 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 184 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 185 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 186 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 187 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 188 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 189 | 3300053107 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere | Metagenome | Endosphere |
| 190 | 8008558824 | Streptomyces scabiei NRRL B-2795 | Isolate | Nodule |
| 191 | 8008574985 | Streptomyces sp. Jing01 | Isolate | Rhizosphere |
| 192 | 8023623736 | Streptomyces sp. 111WW2 | Isolate | Unclassified |
| 193 | 8025413630 | Streptomyces sp. CAI-17 | Isolate | Rhizosphere |
| 194 | 8025478263 | Streptomyces telluris AA8 | Isolate | Rhizosphere |
| 195 | 8025530807 | Streptomyces sp. 4R-3d | Isolate | Unclassified |
| 196 | 8047893842 | Streptomyces cangkringensis DSM 41769 | Isolate | Rhizosphere |
| 197 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 198 | 8048356638 | Streptomyces rhizosphaericus DSM 41760 | Isolate | Rhizosphere |
| 199 | 8048369669 | Streptomyces indonesiensis DSM 41759 | Isolate | Rhizoplane |
| 200 | 8048379754 | Streptomyces asiaticus DSM 41761 | Isolate | Rhizosphere |
| 201 | 8054160619 | Streptomyces rhizoryzae RS10V-4 | Isolate | Rhizosphere |
| 202 | 8056667051 | Streptomyces sichuanensis SCA3-4 | Isolate | Rhizosphere |
| 203 | 8056829672 | Streptomyces barringtoniae JA03 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 63.48 |
| Metatranscriptomes | 0 |
| Isolates | 36.52 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.87 |
| Bulb | 0 |
| Endosphere | 5.22 |
| Nodule | 0.87 |
| Rhizoplane | 0.87 |
| Rhizosphere | 72.17 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 20 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055540_1000081 | 3300003792 | Bacteria | 109820 |
| 2 | Ga0055540_1000120 | 3300003792 | Bacteria | 82415 |
| 3 | Ga0070683_100070555 | 3300005329 | Bacteria | 3259 |
| 4 | Ga0068869_100008621 | 3300005334 | Bacteria | 6584 |
| 5 | Ga0070669_100214982 | 3300005353 | Bacteria | 1518 |
| 6 | Ga0070663_100000967 | 3300005455 | Bacteria | 15634 |
| 7 | Ga0070684_100033474 | 3300005535 | Bacteria | 4388 |
| 8 | Ga0070664_100000851 | 3300005564 | Bacteria | 23587 |
| 9 | Ga0068864_100208654 | 3300005618 | Bacteria | 1798 |
| 10 | Ga0075365_10005871 | 3300006038 | Bacteria | 6679 |
| 11 | Ga0075364_10012625 | 3300006051 | Bacteria | 5174 |
| 12 | Ga0068865_100089852 | 3300006881 | Bacteria | 2226 |
| 13 | Ga0105245_10010082 | 3300009098 | Bacteria | 8231 |
| 14 | Ga0157372_10387698 | 3300013307 | Bacteria | 1628 |
| 15 | Ga0157377_10011096 | 3300014745 | Bacteria | 4485 |
| 16 | Ga0207426_1002595 | 3300025302 | Bacteria | 11223 |
| 17 | Ga0207426_1003992 | 3300025302 | Bacteria | 7491 |
| 18 | Ga0209051_1000076 | 3300025303 | Bacteria | 204355 |
| 19 | Ga0207657_10264102 | 3300025919 | Bacteria | 1369 |
| 20 | Ga0207649_10012030 | 3300025920 | Bacteria | 4787 |
| 21 | Ga0207681_10363002 | 3300025923 | Bacteria | 1162 |
| 22 | Ga0207687_10105823 | 3300025927 | Bacteria | 2079 |
| 23 | Ga0207690_10042400 | 3300025932 | Bacteria | 2988 |
| 24 | Ga0207706_10034843 | 3300025933 | Bacteria | 4478 |
| 25 | Ga0207704_10197360 | 3300025938 | Bacteria | 1469 |
| 26 | Ga0207689_10015139 | 3300025942 | Bacteria | 6538 |
| 27 | Ga0207677_10000881 | 3300026023 | Bacteria | 16925 |
| 28 | Ga0207683_10185018 | 3300026121 | Bacteria | 1890 |
| 29 | Ga0207698_10087064 | 3300026142 | Bacteria | 2543 |
| 30 | Ga0207428_10025357 | 3300027907 | Bacteria | 4963 |
| 31 | Ga0307515_10000560 | 3300028794 | Bacteria | 87534 |
| 32 | Ga0307515_10098555 | 3300028794 | Bacteria | 3558 |
| 33 | Ga0307511_10003836 | 3300030521 | Bacteria | 15373 |
| 34 | Ga0307511_10086718 | 3300030521 | Bacteria | 2154 |
| 35 | Ga0307513_10025505 | 3300031456 | Bacteria | 6845 |
| 36 | Ga0307509_10028514 | 3300031507 | Bacteria | 6204 |
| 37 | Ga0307508_10037468 | 3300031616 | Bacteria | 4360 |
| 38 | Ga0307514_10023328 | 3300031649 | Bacteria | 5021 |
| 39 | Ga0307514_10133414 | 3300031649 | Bacteria | 1705 |
| 40 | Ga0307416_100290225 | 3300032002 | Bacteria | 1619 |
| 41 | Ga0307507_10107938 | 3300033179 | Bacteria | 2291 |
| 42 | Ga0307510_10135727 | 3300033180 | Bacteria | 2118 |
| 43 | Ga0307510_10195078 | 3300033180 | Bacteria | 1567 |
| 44 | Ga0395898_0056659 | 3300037466 | Bacteria | 3820 |
| 45 | Ga0436364_0586317 | 3300037853 | Bacteria | 24910 |
| 46 | Ga0395901_0083254 | 3300038443 | Bacteria | 3344 |
| 47 | Ga0395901_0351913 | 3300038443 | Bacteria | 1520 |
| 48 | Ga0439436_0005919 | 3300041404 | Bacteria | 3750 |
| 49 | Ga0439439_0000607 | 3300041406 | Bacteria | 6296 |
| 50 | Ga0439457_000979 | 3300042014 | Bacteria | 8584 |
| 51 | Ga0450890_003701 | 3300042127 | Bacteria | 2023 |
| 52 | Ga0439458_0001551 | 3300042157 | Bacteria | 5739 |
| 53 | Ga0466972_0001356 | 3300044658 | Bacteria | 11867 |
| 54 | Ga0466966_0014245 | 3300044684 | Bacteria | 5265 |
| 55 | Ga0466961_0109579 | 3300044693 | Bacteria | 1738 |
| 56 | Ga0466971_0007686 | 3300044719 | Bacteria | 4700 |
| 57 | Ga0466970_0080790 | 3300044765 | Bacteria | 1757 |
| 58 | Ga0466967_0031022 | 3300045976 | Bacteria | 4494 |
| 59 | Ga0495592_0006822 | 3300046454 | Bacteria | 8524 |
| 60 | Ga0495603_0009386 | 3300046455 | Bacteria | 5912 |
| 61 | Ga0495629_0000757 | 3300046459 | Bacteria | 26096 |
| 62 | Ga0495629_0032060 | 3300046459 | Bacteria | 3721 |
| 63 | Ga0495629_0087611 | 3300046459 | Bacteria | 2172 |
| 64 | Ga0495651_0006333 | 3300046462 | Bacteria | 9054 |
| 65 | Ga0495582_0045610 | 3300046473 | Bacteria | 2414 |
| 66 | Ga0495605_0003219 | 3300046474 | Bacteria | 9793 |
| 67 | Ga0495662_0001741 | 3300046476 | Bacteria | 10876 |
| 68 | Ga0495662_0066813 | 3300046476 | Bacteria | 1739 |
| 69 | Ga0495664_0002176 | 3300046477 | Bacteria | 10497 |
| 70 | Ga0495664_0337321 | 3300046477 | Bacteria | 908 |
| 71 | Ga0495594_0003937 | 3300046499 | Bacteria | 7640 |
| 72 | Ga0495606_0010799 | 3300046507 | Bacteria | 7525 |
| 73 | Ga0495610_0021200 | 3300046512 | Bacteria | 3579 |
| 74 | Ga0495618_0096922 | 3300046514 | Bacteria | 1886 |
| 75 | Ga0495618_0150861 | 3300046514 | Bacteria | 1485 |
| 76 | Ga0495628_0246730 | 3300046516 | Bacteria | 1334 |
| 77 | Ga0495631_0004691 | 3300046518 | Bacteria | 7225 |
| 78 | Ga0495643_0138783 | 3300046522 | Bacteria | 1214 |
| 79 | Ga0495652_0042283 | 3300046529 | Bacteria | 3930 |
| 80 | Ga0495640_0016566 | 3300046533 | Bacteria | 5510 |
| 81 | Ga0495587_0005952 | 3300046536 | Bacteria | 7952 |
| 82 | Ga0495597_0069140 | 3300046542 | Bacteria | 1524 |
| 83 | Ga0495668_0012906 | 3300046616 | Bacteria | 4947 |
| 84 | Ga0495634_0000101 | 3300046642 | Bacteria | 70643 |
| 85 | Ga0495625_0009722 | 3300046660 | Bacteria | 8005 |
| 86 | Ga0495635_0003813 | 3300046663 | Bacteria | 10473 |
| 87 | Ga0495588_0029533 | 3300046674 | Bacteria | 2750 |
| 88 | Ga0495657_0002147 | 3300046675 | Bacteria | 16754 |
| 89 | Ga0495657_0196330 | 3300046675 | Bacteria | 1231 |
| 90 | Ga0495646_0017066 | 3300046680 | Bacteria | 4608 |
| 91 | Ga0495646_0195995 | 3300046680 | Bacteria | 1102 |
| 92 | Ga0495658_0069364 | 3300046683 | Bacteria | 2043 |
| 93 | Ga0495613_0000567 | 3300046689 | Bacteria | 30412 |
| 94 | Ga0495613_0006563 | 3300046689 | Bacteria | 8697 |
| 95 | Ga0495671_0025504 | 3300046692 | Bacteria | 3072 |
| 96 | Ga0495649_0038838 | 3300046694 | Bacteria | 2610 |
| 97 | Ga0495600_0038041 | 3300046809 | Bacteria | 3130 |
| 98 | Ga0495660_0040236 | 3300046810 | Bacteria | 2591 |
| 99 | Ga0495581_0169054 | 3300047315 | Bacteria | 1278 |
| 100 | Ga0495604_0001284 | 3300047317 | Bacteria | 20535 |
| 101 | Ga0495636_0028233 | 3300047318 | Bacteria | 2287 |
| 102 | Ga0495636_0032726 | 3300047318 | Bacteria | 2133 |
| 103 | Ga0495674_0050818 | 3300047319 | Bacteria | 3657 |
| 104 | Ga0495676_0002199 | 3300047321 | Bacteria | 17272 |
| 105 | Ga0495676_0006588 | 3300047321 | Bacteria | 10706 |
| 106 | Ga0495687_000830 | 3300047443 | Bacteria | 33048 |
| 107 | Ga0495687_001332 | 3300047443 | Bacteria | 23028 |
| 108 | Ga0495677_0038993 | 3300047445 | Bacteria | 1736 |
| 109 | Ga0495685_072278 | 3300047447 | Bacteria | 1154 |
| 110 | Ga0495686_0053451 | 3300047472 | Bacteria | 2531 |
| 111 | Ga0495593_0027414 | 3300047673 | Bacteria | 3136 |
| 112 | Ga0495593_0054706 | 3300047673 | Bacteria | 2102 |
| 113 | Ga0495602_0238683 | 3300048088 | Bacteria | 1361 |
| 114 | Ga0495614_0000869 | 3300048089 | Bacteria | 12785 |
| 115 | Ga0495614_0013303 | 3300048089 | Bacteria | 3609 |
| 116 | Ga0495614_0066486 | 3300048089 | Bacteria | 1551 |
| 117 | Ga0495626_0021545 | 3300048091 | Bacteria | 3197 |
| 118 | Ga0496109_0064603 | 3300048912 | Bacteria | 3349 |
| 119 | Ga0496123_0041325 | 3300048926 | Bacteria | 3199 |
| 120 | Ga0496124_0032825 | 3300048927 | Bacteria | 4579 |
| 121 | Ga0501033_0043323 | 3300049570 | Bacteria | 3352 |
| 122 | Ga0501034_0001237 | 3300049571 | Bacteria | 34705 |
| 123 | Ga0501034_0039307 | 3300049571 | Bacteria | 4792 |
| 124 | Ga0501036_0000303 | 3300049572 | Bacteria | 34139 |
| 125 | Ga0501038_0035393 | 3300049574 | Bacteria | 4384 |
| 126 | Ga0501038_0304079 | 3300049574 | Bacteria | 1251 |
| 127 | Ga0501039_0001051 | 3300049575 | Bacteria | 20234 |
| 128 | Ga0501043_0001119 | 3300049579 | Bacteria | 23527 |
| 129 | Ga0501046_0288223 | 3300049580 | Bacteria | 1201 |
| 130 | Ga0501047_0010428 | 3300049581 | Bacteria | 8793 |
| 131 | Ga0501047_0248553 | 3300049581 | Bacteria | 1627 |
| 132 | Ga0501069_0105453 | 3300049585 | Bacteria | 1602 |
| 133 | Ga0501070_0001106 | 3300049586 | Bacteria | 24212 |
| 134 | Ga0501074_0000400 | 3300049590 | Bacteria | 25843 |
| 135 | Ga0501035_0002089 | 3300049822 | Bacteria | 19875 |
| 136 | Ga0501035_0215746 | 3300049822 | Bacteria | 1640 |
| 137 | Ga0501044_0001130 | 3300049823 | Bacteria | 31721 |
| 138 | Ga0501044_0006357 | 3300049823 | Bacteria | 13059 |
| 139 | Ga0501044_0048702 | 3300049823 | Bacteria | 4376 |
| 140 | nmdc:mga00v17_6811_c1 | 3300050491 | Bacteria | 6071 |
| 141 | nmdc:mga09592_139039_c1 | 3300050508 | Bacteria | 2092 |
| 142 | nmdc:mga08y16_307831_c1 | 3300050511 | Bacteria | 1632 |
| 143 | Ga0500644_0046544 | 3300053088 | Bacteria | 1467 |
| 144 | Ga0500566_0031339 | 3300053094 | Bacteria | 3101 |
| 145 | Ga0500640_029937 | 3300053095 | Bacteria | 2382 |
| 146 | Ga0500560_004911 | 3300053107 | Bacteria | 2901 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046477 | Ga0495664_0337321 | Ga0495664_0337321_29_808 | 240 |
| 2 | 3300046533 | Ga0495640_0016566 | Ga0495640_0016566_4230_5186 | 261 |
| 3 | 3300046474 | Ga0495605_0003219 | Ga0495605_0003219_5704_6660 | 272 |
| 4 | 3300046499 | Ga0495594_0003937 | Ga0495594_0003937_140_1096 | 272 |
| 5 | 3300046507 | Ga0495606_0010799 | Ga0495606_0010799_481_1437 | 272 |
| 6 | 3300046512 | Ga0495610_0021200 | Ga0495610_0021200_2321_3277 | 272 |
| 7 | 3300046542 | Ga0495597_0069140 | Ga0495597_0069140_221_1177 | 272 |
| 8 | 3300046616 | Ga0495668_0012906 | Ga0495668_0012906_323_1279 | 272 |
| 9 | 3300046810 | Ga0495660_0040236 | Ga0495660_0040236_54_1010 | 272 |
| 10 | 3300047445 | Ga0495677_0038993 | Ga0495677_0038993_22_978 | 272 |
| 11 | 3300047472 | Ga0495686_0053451 | Ga0495686_0053451_174_1130 | 272 |
| 12 | 3300048091 | Ga0495626_0021545 | Ga0495626_0021545_2159_3115 | 272 |
| 13 | 3300046518 | Ga0495631_0004691 | Ga0495631_0004691_729_1685 | 273 |
| 14 | 3300046680 | Ga0495646_0195995 | Ga0495646_0195995_32_988 | 273 |
| 15 | 3300046694 | Ga0495649_0038838 | Ga0495649_0038838_819_1775 | 274 |
| 16 | 3300047318 | Ga0495636_0028233 | Ga0495636_0028233_577_1632 | 274 |
| 17 | 3300047447 | Ga0495685_072278 | Ga0495685_072278_29_1084 | 274 |
| 18 | 3300005535 | Ga0070684_100033474 | Ga0070684_1000334742 | 277 |
| 19 | 3300013307 | Ga0157372_10387698 | Ga0157372_103876981 | 279 |
| 20 | 3300046675 | Ga0495657_0196330 | Ga0495657_0196330_213_1169 | 286 |
| 21 | 3300047673 | Ga0495593_0054706 | Ga0495593_0054706_279_1235 | 286 |
| 22 | 3300046514 | Ga0495618_0150861 | Ga0495618_0150861_449_1432 | 287 |
| 23 | 3300032002 | Ga0307416_100290225 | Ga0307416_1002902252 | 289 |
| 24 | 3300053094 | Ga0500566_0031339 | Ga0500566_0031339_45_1034 | 289 |
| 25 | 3300046455 | Ga0495603_0009386 | Ga0495603_0009386_296_1276 | 290 |
| 26 | 3300046459 | Ga0495629_0000757 | Ga0495629_0000757_19968_20948 | 290 |
| 27 | 3300046689 | Ga0495613_0006563 | Ga0495613_0006563_827_1807 | 290 |
| 28 | 3300047321 | Ga0495676_0006588 | Ga0495676_0006588_2738_3718 | 290 |
| 29 | 3300048089 | Ga0495614_0000869 | Ga0495614_0000869_414_1394 | 290 |
| 30 | 3300049580 | Ga0501046_0288223 | Ga0501046_0288223_142_1155 | 290 |
| 31 | 3300049823 | Ga0501044_0001130 | Ga0501044_0001130_981_1994 | 290 |
| 32 | 3300005329 | Ga0070683_100070555 | Ga0070683_1000705552 | 292 |
| 33 | 3300005353 | Ga0070669_100214982 | Ga0070669_1002149822 | 292 |
| 34 | 3300005455 | Ga0070663_100000967 | Ga0070663_1000009673 | 292 |
| 35 | 3300005564 | Ga0070664_100000851 | Ga0070664_10000085112 | 292 |
| 36 | 3300006881 | Ga0068865_100089852 | Ga0068865_1000898522 | 292 |
| 37 | 3300014745 | Ga0157377_10011096 | Ga0157377_100110966 | 292 |
| 38 | 3300025920 | Ga0207649_10012030 | Ga0207649_100120302 | 292 |
| 39 | 3300025923 | Ga0207681_10363002 | Ga0207681_103630022 | 292 |
| 40 | 3300025927 | Ga0207687_10105823 | Ga0207687_101058233 | 292 |
| 41 | 3300025932 | Ga0207690_10042400 | Ga0207690_100424003 | 292 |
| 42 | 3300025933 | Ga0207706_10034843 | Ga0207706_100348436 | 292 |
| 43 | 3300025938 | Ga0207704_10197360 | Ga0207704_101973601 | 292 |
| 44 | 3300025942 | Ga0207689_10015139 | Ga0207689_100151392 | 292 |
| 45 | 3300026023 | Ga0207677_10000881 | Ga0207677_100008815 | 292 |
| 46 | 3300026142 | Ga0207698_10087064 | Ga0207698_100870643 | 292 |
| 47 | 3300027907 | Ga0207428_10025357 | Ga0207428_100253576 | 292 |
| 48 | 3300050511 | nmdc:mga08y16_307831_c1 | nmdc:mga08y16_307831_c1_73_1029 | 292 |
| 49 | 3300048912 | Ga0496109_0064603 | Ga0496109_0064603_2181_3176 | 293 |
| 50 | 3300050508 | nmdc:mga09592_139039_c1 | nmdc:mga09592_139039_c1_10_957 | 294 |
| 51 | 3300006051 | Ga0075364_10012625 | Ga0075364_100126253 | 296 |
| 52 | 3300049570 | Ga0501033_0043323 | Ga0501033_0043323_1892_2896 | 296 |
| 53 | 3300049574 | Ga0501038_0035393 | Ga0501038_0035393_2472_3407 | 296 |
| 54 | 3300050491 | nmdc:mga00v17_6811_c1 | nmdc:mga00v17_6811_c1_4100_5050 | 296 |
| 55 | 3300045976 | Ga0466967_0031022 | Ga0466967_0031022_1399_2343 | 297 |
| 56 | 3300006038 | Ga0075365_10005871 | Ga0075365_100058715 | 298 |
| 57 | 3300046476 | Ga0495662_0066813 | Ga0495662_0066813_62_1018 | 298 |
| 58 | 3300047319 | Ga0495674_0050818 | Ga0495674_0050818_2229_3185 | 298 |
| 59 | 3300049823 | Ga0501044_0006357 | Ga0501044_0006357_6916_7860 | 298 |
| 60 | 3300025302 | Ga0207426_1003992 | Ga0207426_10039926 | 299 |
| 61 | 3300046459 | Ga0495629_0032060 | Ga0495629_0032060_2460_3488 | 299 |
| 62 | 3300031616 | Ga0307508_10037468 | Ga0307508_100374683 | 300 |
| 63 | 3300049574 | Ga0501038_0304079 | Ga0501038_0304079_152_1231 | 300 |
| 64 | 3300046522 | Ga0495643_0138783 | Ga0495643_0138783_91_1032 | 302 |
| 65 | 3300047318 | Ga0495636_0032726 | Ga0495636_0032726_570_1511 | 302 |
| 66 | 3300047443 | Ga0495687_001332 | Ga0495687_001332_10795_11736 | 302 |
| 67 | 3300049823 | Ga0501044_0048702 | Ga0501044_0048702_1571_2545 | 302 |
| 68 | 3300041404 | Ga0439436_0005919 | Ga0439436_0005919_176_1171 | 303 |
| 69 | 3300041406 | Ga0439439_0000607 | Ga0439439_0000607_3610_4605 | 303 |
| 70 | 3300042014 | Ga0439457_000979 | Ga0439457_000979_3875_4870 | 303 |
| 71 | 3300044719 | Ga0466971_0007686 | Ga0466971_0007686_940_1911 | 304 |
| 72 | iso_pu_bacteria | 2857481737 | 2857482969 | 304 |
| 73 | 3300044684 | Ga0466966_0014245 | Ga0466966_0014245_1018_1989 | 305 |
| 74 | iso_pu_bacteria | 2818991463 | 2819694397 | 305 |
| 75 | 3300026121 | Ga0207683_10185018 | Ga0207683_101850182 | 306 |
| 76 | iso_pu_bacteria | 2643221548 | 2643762593 | 306 |
| 77 | iso_pu_bacteria | 2643221681 | 2644455661 | 306 |
| 78 | iso_pu_bacteria | 2643221682 | 2644460913 | 306 |
| 79 | iso_pu_bacteria | 2862574272 | 2862583274 | 306 |
| 80 | iso_pu_bacteria | 2863404153 | 2863406544 | 306 |
| 81 | iso_pu_bacteria | 8008558824 | 8008561763 | 306 |
| 82 | iso_pu_bacteria | 2554235005 | 2554259199 | 307 |
| 83 | iso_pu_bacteria | 2582581313 | 2585307504 | 307 |
| 84 | iso_pu_bacteria | 2582581314 | 2585317666 | 307 |
| 85 | iso_pu_bacteria | 2616644814 | 2616693943 | 307 |
| 86 | iso_pu_bacteria | 2643221647 | 2644270766 | 307 |
| 87 | iso_pu_bacteria | 2643221714 | 2644630540 | 307 |
| 88 | iso_pu_bacteria | 2786546132 | 2786668649 | 307 |
| 89 | iso_pu_bacteria | 2808606375 | 2808918838 | 307 |
| 90 | iso_pu_bacteria | 2811994917 | 2812481995 | 307 |
| 91 | iso_pu_bacteria | 2862281513 | 2862289052 | 307 |
| 92 | iso_pu_bacteria | 2877676314 | 2877682959 | 307 |
| 93 | iso_pu_bacteria | 2912715099 | 2912721972 | 307 |
| 94 | iso_pu_bacteria | 2946072368 | 2946074303 | 307 |
| 95 | iso_pu_bacteria | 2947224130 | 2947231425 | 307 |
| 96 | iso_pu_bacteria | 2954380949 | 2954388174 | 307 |
| 97 | iso_pu_bacteria | 2954673503 | 2954674928 | 307 |
| 98 | iso_pu_bacteria | 2954682443 | 2954689207 | 307 |
| 99 | iso_pu_bacteria | 2954691527 | 2954698981 | 307 |
| 100 | iso_pu_bacteria | 2954701450 | 2954703240 | 307 |
| 101 | iso_pu_bacteria | 2954711539 | 2954717934 | 307 |
| 102 | iso_pu_bacteria | 2954721474 | 2954727900 | 307 |
| 103 | iso_pu_bacteria | 2954731030 | 2954733904 | 307 |
| 104 | iso_pu_bacteria | 2954740390 | 2954746798 | 307 |
| 105 | iso_pu_bacteria | 2954749733 | 2954752787 | 307 |
| 106 | iso_pu_bacteria | 2954759201 | 2954765912 | 307 |
| 107 | iso_pu_bacteria | 2966598605 | 2966604000 | 307 |
| 108 | iso_pu_bacteria | 8008574985 | 8008580372 | 307 |
| 109 | 3300037466 | Ga0395898_0056659 | Ga0395898_0056659_2716_3675 | 308 |
| 110 | 3300042127 | Ga0450890_003701 | Ga0450890_003701_343_1338 | 308 |
| 111 | iso_pu_bacteria | 2643221578 | 2643897109 | 308 |
| 112 | iso_pu_bacteria | 2643221673 | 2644408253 | 308 |
| 113 | iso_pu_bacteria | 2808606982 | 2811847349 | 308 |
| 114 | iso_pu_bacteria | 2946045630 | 2946051635 | 308 |
| 115 | iso_pu_bacteria | 2954002825 | 2954004678 | 308 |
| 116 | iso_pu_bacteria | 2997451912 | 2997458790 | 308 |
| 117 | iso_pu_bacteria | 8056829672 | 8056833011 | 308 |
| 118 | 3300005334 | Ga0068869_100008621 | Ga0068869_1000086217 | 309 |
| 119 | 3300005618 | Ga0068864_100208654 | Ga0068864_1002086542 | 309 |
| 120 | 3300009098 | Ga0105245_10010082 | Ga0105245_100100824 | 309 |
| 121 | 3300025919 | Ga0207657_10264102 | Ga0207657_102641022 | 309 |
| 122 | 3300048926 | Ga0496123_0041325 | Ga0496123_0041325_21_971 | 309 |
| 123 | 3300049585 | Ga0501069_0105453 | Ga0501069_0105453_287_1264 | 309 |
| 124 | iso_pu_bacteria | 2582581312 | 2585298583 | 309 |
| 125 | iso_pu_bacteria | 2816332119 | 2816425506 | 309 |
| 126 | iso_pu_bacteria | 2873151551 | 2873157295 | 309 |
| 127 | iso_pu_bacteria | 3006321560 | 3006323211 | 309 |
| 128 | iso_pu_bacteria | 3006486233 | 3006486381 | 309 |
| 129 | iso_pu_bacteria | 3006493962 | 3006496623 | 309 |
| 130 | iso_pu_bacteria | 8025478263 | 8025478956 | 309 |
| 131 | 3300028794 | Ga0307515_10000560 | Ga0307515_1000056076 | 310 |
| 132 | 3300028794 | Ga0307515_10098555 | Ga0307515_100985554 | 310 |
| 133 | 3300030521 | Ga0307511_10003836 | Ga0307511_1000383615 | 310 |
| 134 | 3300030521 | Ga0307511_10086718 | Ga0307511_100867181 | 310 |
| 135 | 3300031456 | Ga0307513_10025505 | Ga0307513_100255055 | 310 |
| 136 | 3300031507 | Ga0307509_10028514 | Ga0307509_100285141 | 310 |
| 137 | 3300031649 | Ga0307514_10023328 | Ga0307514_100233282 | 310 |
| 138 | 3300031649 | Ga0307514_10133414 | Ga0307514_101334142 | 310 |
| 139 | 3300033179 | Ga0307507_10107938 | Ga0307507_101079382 | 310 |
| 140 | 3300033180 | Ga0307510_10135727 | Ga0307510_101357272 | 310 |
| 141 | 3300033180 | Ga0307510_10195078 | Ga0307510_101950782 | 310 |
| 142 | 3300042157 | Ga0439458_0001551 | Ga0439458_0001551_4000_4941 | 310 |
| 143 | 3300044658 | Ga0466972_0001356 | Ga0466972_0001356_8159_9103 | 310 |
| 144 | 3300044693 | Ga0466961_0109579 | Ga0466961_0109579_233_1177 | 310 |
| 145 | 3300044765 | Ga0466970_0080790 | Ga0466970_0080790_452_1396 | 310 |
| 146 | 3300046454 | Ga0495592_0006822 | Ga0495592_0006822_7265_8206 | 310 |
| 147 | 3300046459 | Ga0495629_0087611 | Ga0495629_0087611_913_1854 | 310 |
| 148 | 3300046462 | Ga0495651_0006333 | Ga0495651_0006333_7927_8868 | 310 |
| 149 | 3300046473 | Ga0495582_0045610 | Ga0495582_0045610_213_1154 | 310 |
| 150 | 3300046476 | Ga0495662_0001741 | Ga0495662_0001741_9585_10526 | 310 |
| 151 | 3300046477 | Ga0495664_0002176 | Ga0495664_0002176_1948_2889 | 310 |
| 152 | 3300046514 | Ga0495618_0096922 | Ga0495618_0096922_241_1182 | 310 |
| 153 | 3300046516 | Ga0495628_0246730 | Ga0495628_0246730_198_1139 | 310 |
| 154 | 3300046529 | Ga0495652_0042283 | Ga0495652_0042283_2918_3859 | 310 |
| 155 | 3300046536 | Ga0495587_0005952 | Ga0495587_0005952_352_1293 | 310 |
| 156 | 3300046642 | Ga0495634_0000101 | Ga0495634_0000101_881_1822 | 310 |
| 157 | 3300046660 | Ga0495625_0009722 | Ga0495625_0009722_1448_2389 | 310 |
| 158 | 3300046663 | Ga0495635_0003813 | Ga0495635_0003813_2873_3814 | 310 |
| 159 | 3300046674 | Ga0495588_0029533 | Ga0495588_0029533_356_1297 | 310 |
| 160 | 3300046675 | Ga0495657_0002147 | Ga0495657_0002147_8377_9318 | 310 |
| 161 | 3300046680 | Ga0495646_0017066 | Ga0495646_0017066_3483_4424 | 310 |
| 162 | 3300046683 | Ga0495658_0069364 | Ga0495658_0069364_222_1163 | 310 |
| 163 | 3300046689 | Ga0495613_0000567 | Ga0495613_0000567_24582_25523 | 310 |
| 164 | 3300046692 | Ga0495671_0025504 | Ga0495671_0025504_1743_2684 | 310 |
| 165 | 3300046809 | Ga0495600_0038041 | Ga0495600_0038041_1820_2761 | 310 |
| 166 | 3300047315 | Ga0495581_0169054 | Ga0495581_0169054_199_1140 | 310 |
| 167 | 3300047317 | Ga0495604_0001284 | Ga0495604_0001284_345_1286 | 310 |
| 168 | 3300047321 | Ga0495676_0002199 | Ga0495676_0002199_398_1339 | 310 |
| 169 | 3300047443 | Ga0495687_000830 | Ga0495687_000830_18375_19316 | 310 |
| 170 | 3300047673 | Ga0495593_0027414 | Ga0495593_0027414_376_1317 | 310 |
| 171 | 3300048088 | Ga0495602_0238683 | Ga0495602_0238683_40_981 | 310 |
| 172 | 3300048089 | Ga0495614_0013303 | Ga0495614_0013303_2262_3203 | 310 |
| 173 | 3300048089 | Ga0495614_0066486 | Ga0495614_0066486_204_1145 | 310 |
| 174 | 3300048927 | Ga0496124_0032825 | Ga0496124_0032825_3035_3982 | 310 |
| 175 | 3300049822 | Ga0501035_0215746 | Ga0501035_0215746_406_1347 | 310 |
| 176 | 3300053088 | Ga0500644_0046544 | Ga0500644_0046544_332_1273 | 310 |
| 177 | 3300053095 | Ga0500640_029937 | Ga0500640_029937_340_1281 | 310 |
| 178 | 3300053107 | Ga0500560_004911 | Ga0500560_004911_1767_2708 | 310 |
| 179 | iso_pu_bacteria | 2643221587 | 2643945427 | 310 |
| 180 | iso_pu_bacteria | 2643221677 | 2644432326 | 310 |
| 181 | iso_pu_bacteria | 2791355406 | 2793982703 | 310 |
| 182 | iso_pu_bacteria | 2862178590 | 2862183218 | 310 |
| 183 | iso_pu_bacteria | 2912757875 | 2912759241 | 310 |
| 184 | iso_pu_bacteria | 8025530807 | 8025535759 | 310 |
| 185 | iso_pu_bacteria | 8047893842 | 8047899857 | 310 |
| 186 | iso_pu_bacteria | 8048127548 | 8048131004 | 310 |
| 187 | iso_pu_bacteria | 8048356638 | 8048359073 | 310 |
| 188 | iso_pu_bacteria | 8048369669 | 8048376805 | 310 |
| 189 | iso_pu_bacteria | 8048379754 | 8048385858 | 310 |
| 190 | 3300037853 | Ga0436364_0586317 | Ga0436364_0586317_13638_14597 | 311 |
| 191 | 3300038443 | Ga0395901_0083254 | Ga0395901_0083254_279_1241 | 311 |
| 192 | iso_pu_bacteria | 2862507626 | 2862508500 | 311 |
| 193 | iso_pu_bacteria | 2912723979 | 2912725741 | 311 |
| 194 | iso_pu_bacteria | 2990059506 | 2990066198 | 311 |
| 195 | iso_pu_bacteria | 8023623736 | 8023625054 | 311 |
| 196 | iso_pu_bacteria | 8025413630 | 8025413903 | 311 |
| 197 | iso_pu_bacteria | 8054160619 | 8054163438 | 311 |
| 198 | 3300025302 | Ga0207426_1002595 | Ga0207426_10025954 | 312 |
| 199 | iso_pu_bacteria | 2643221670 | 2644387651 | 312 |
| 200 | iso_pu_bacteria | 2784746763 | 2785345302 | 312 |
| 201 | iso_pu_bacteria | 2935390628 | 2935394385 | 312 |
| 202 | iso_pu_bacteria | 2616644941 | 2616899169 | 313 |
| 203 | iso_pu_bacteria | 2643221678 | 2644435451 | 313 |
| 204 | iso_pu_bacteria | 2808606359 | 2808848073 | 313 |
| 205 | iso_pu_bacteria | 2808606448 | 2809230665 | 313 |
| 206 | iso_pu_bacteria | 2919468124 | 2919475066 | 313 |
| 207 | iso_pu_bacteria | 2984576629 | 2984579505 | 313 |
| 208 | iso_pu_bacteria | 2990256926 | 2990257114 | 313 |
| 209 | iso_pu_bacteria | 2997600082 | 2997606832 | 313 |
| 210 | 3300038443 | Ga0395901_0351913 | Ga0395901_0351913_323_1285 | 314 |
| 211 | 3300049571 | Ga0501034_0039307 | Ga0501034_0039307_2264_3238 | 314 |
| 212 | 3300049581 | Ga0501047_0010428 | Ga0501047_0010428_5346_6320 | 314 |
| 213 | iso_pu_bacteria | 2811994879 | 2812359925 | 314 |
| 214 | iso_pu_bacteria | 2867369537 | 2867370370 | 314 |
| 215 | iso_pu_bacteria | 2918501144 | 2918502926 | 314 |
| 216 | iso_pu_bacteria | 2946064051 | 2946065980 | 314 |
| 217 | iso_pu_bacteria | 8056667051 | 8056667575 | 314 |
| 218 | iso_pu_bacteria | 2875391855 | 2875393064 | 315 |
| 219 | 3300049571 | Ga0501034_0001237 | Ga0501034_0001237_7292_8290 | 316 |
| 220 | 3300049572 | Ga0501036_0000303 | Ga0501036_0000303_24458_25456 | 316 |
| 221 | 3300049575 | Ga0501039_0001051 | Ga0501039_0001051_15014_16012 | 316 |
| 222 | 3300049579 | Ga0501043_0001119 | Ga0501043_0001119_6563_7561 | 316 |
| 223 | 3300049581 | Ga0501047_0248553 | Ga0501047_0248553_182_1180 | 316 |
| 224 | 3300049586 | Ga0501070_0001106 | Ga0501070_0001106_16120_17118 | 316 |
| 225 | 3300049590 | Ga0501074_0000400 | Ga0501074_0000400_24501_25499 | 316 |
| 226 | 3300049822 | Ga0501035_0002089 | Ga0501035_0002089_2811_3809 | 316 |
| 227 | iso_pu_bacteria | 3006425503 | 3006426344 | 319 |
| 228 | 3300003792 | Ga0055540_1000081 | Ga0055540_100008147 | 321 |
| 229 | 3300003792 | Ga0055540_1000120 | Ga0055540_100012047 | 321 |
| 230 | 3300025303 | Ga0209051_1000076 | Ga0209051_1000076136 | 321 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2dql-assembly1.cif.gz_B | crystal structure of the circadian clock associated protein pex from anabaena | 0.4661 | 237 | 299 |
| 5lrx-assembly1.cif.gz_A | structure of a20 otu domain bound to ubiquitin | 0.3138 | 254 | 300 |
| 2dql-assembly1.cif.gz_B | crystal structure of the circadian clock associated protein pex from anabaena | 0.2802 | 237 | 299 |
| 3swh-assembly2.cif.gz_B | munc13-1, mun domain, c-terminal module | 0.233 | 31 | 227 |
| 6ob6-assembly1.cif.gz_A | human equilibrative nucleoside transporter-1, s-(4-nitrobenzyl)-6-thioinosine bound, merohedrally twinned | 0.2269 | 5 | 304 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2dqlA00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.3691 | 209 | 299 | 1.10.10.10 |
| af_D4A4C7_27_172_1.20.140.150 | Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; | 0.3284 | 169 | 304 | 1.20.140.150 |
| af_Q9LEQ7_451_598_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.317 | 97 | 208 | 1.25.40.10 |
| af_Q9VU70_13_180_1.25.40.10 | Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain | 0.3146 | 100 | 202 | 1.25.40.10 |
| 2dqlA00 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.3131 | 209 | 299 | 1.10.10.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7K1JWM1-F1-model_v4 | Cobalamin biosynthesis protein CobD | 0.9744 | 3 | 304 |
GO:0005886
GO:0009236 GO:0015420 GO:0048472 |
| AF-A0A5M3VY86-F1-model_v4 | Cobalamin biosynthesis protein CobD | 0.9734 | 53 | 310 |
GO:0005886
GO:0009236 GO:0015420 GO:0048472 |
| AF-A0A367B439-F1-model_v4 | Cobalamin biosynthesis protein CobD | 0.9729 | 5 | 308 |
GO:0005886
GO:0009236 GO:0015420 GO:0048472 |
| AF-A0A1W2FJA4-F1-model_v4 | Cobalamin biosynthesis protein CobD | 0.9729 | 5 | 304 |
GO:0005886
GO:0009236 GO:0015420 GO:0048472 |
| AF-A0A160NX40-F1-model_v4 | Cobalamin biosynthesis protein CobD | 0.9729 | 4 | 313 |
GO:0005886
GO:0009236 GO:0015420 GO:0048472 |
Predicted Structure (AlphaFold2)
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