F343456

General Info

Members Datasets Scaffolds Average Seq Length
230 185 460 147

Family's Representative Sequence

Representative Sequence 3300049583|Ga0501067_0159438|Ga0501067_0159438_256_693
Length 140
Sequence MAQDAGDIARRSADAMWAEDRASQGLGMQVLEVGPGYARLAMTITERMTNGHGFTFALADSAFAFACNSHGQRAVAQHCSITYVAPVASGTRLIAEARERQRGERSGIYDVTVRDETGATIAEFRGHSRNLPSSFIDKGG

Samples

Sample ID Description Type Environment
1 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
6 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
36 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
40 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
43 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
44 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
50 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
73 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
74 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
75 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
76 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
77 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
78 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
79 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
80 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
81 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
82 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
83 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
88 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
89 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
90 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
91 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
92 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
93 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
102 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
103 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
111 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
112 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
113 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 2508501050 Microvirga lupini Lut6 Isolate Nodule
151 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
152 2509276019 Ensifer aridi TW10 Isolate Nodule
153 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
154 2516143018 Ensifer sp. BR816 Isolate Nodule
155 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
156 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
157 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
158 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
159 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
160 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
161 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
162 2751185821 Ensifer shofinae CCBAU 251167 Isolate Unclassified
163 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
164 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
165 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
166 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
167 2791355094 Sinorhizobium sp. BJ1 Isolate Nodule
168 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
169 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
170 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
171 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
172 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
173 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
174 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
175 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
176 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
177 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
178 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
179 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
180 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
181 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
182 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
183 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
184 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
185 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.35
Metatranscriptomes 0
Isolates 15.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.13
Nodule 9.57
Rhizoplane 2.61
Rhizosphere 62.17
Stem 0
Stem Tuber 0
Unclassified 3.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501067_0159438 3300049583 Bacteria 1257
2 JGI25162J39368_1000476 3300002737 Bacteria 30796
3 JGI25154J39366_1020825 3300002738 Bacteria 625
4 JGI25165J46597_1000068 3300003214 Bacteria 196201
5 Ga0055528_1011124 3300003790 Bacteria 3602
6 JGI25405J52794_10030826 3300003911 Bacteria 1113
7 Ga0070666_10397431 3300005335 Bacteria 990
8 Ga0070691_10143856 3300005341 Bacteria 1217
9 Ga0070668_100883783 3300005347 Bacteria 798
10 Ga0070669_100082062 3300005353 Bacteria 2403
11 Ga0070700_100019464 3300005441 Bacteria 3918
12 Ga0070694_100018399 3300005444 Bacteria 4434
13 Ga0070663_100144216 3300005455 Bacteria 1821
14 Ga0070678_100855446 3300005456 Bacteria 829
15 Ga0070697_100254597 3300005536 Bacteria 1502
16 Ga0070695_100004197 3300005545 Bacteria 8431
17 Ga0070665_100056916 3300005548 Bacteria 3921
18 Ga0068856_100019578 3300005614 Bacteria 6571
19 Ga0081455_10000068 3300005937 Bacteria 112215
20 Ga0081455_10247228 3300005937 Bacteria 1307
21 Ga0081540_1008844 3300005983 Bacteria 6991
22 Ga0081540_1074497 3300005983 Unclassified 1555
23 Ga0075365_10027338 3300006038 Bacteria 3629
24 Ga0075363_100029334 3300006048 Bacteria 2839
25 Ga0070715_10033806 3300006163 Bacteria 2092
26 Ga0075362_10274956 3300006177 Bacteria 832
27 Ga0075369_10002434 3300006186 Bacteria 6633
28 Ga0075428_100061951 3300006844 Bacteria 4097
29 Ga0075431_100604701 3300006847 Bacteria 1080
30 Ga0075431_100771049 3300006847 Bacteria 936
31 Ga0075433_10004414 3300006852 Bacteria 10950
32 Ga0075433_10270079 3300006852 Unclassified 1507
33 Ga0075434_100003399 3300006871 Bacteria 14250
34 Ga0075435_100100852 3300007076 Bacteria 2392
35 Ga0111539_10020493 3300009094 Bacteria 8143
36 Ga0111539_10026493 3300009094 Bacteria 7087
37 Ga0111539_10215533 3300009094 Bacteria 2236
38 Ga0111539_10969068 3300009094 Unclassified 989
39 Ga0111539_11101964 3300009094 Bacteria 923
40 Ga0114129_10022605 3300009147 Bacteria 8919
41 Ga0105243_10182868 3300009148 Bacteria 1824
42 Ga0105248_10589433 3300009177 Bacteria 1254
43 Ga0105248_12192794 3300009177 Bacteria 629
44 Ga0123340_1060526 3300009763 Bacteria 1101
45 Ga0123342_1032409 3300009766 Bacteria 2452
46 Ga0163162_11106355 3300013306 Bacteria 898
47 Ga0163163_11403546 3300014325 Bacteria 760
48 Ga0157380_10028249 3300014326 Bacteria 4274
49 Ga0157380_13257142 3300014326 Bacteria 519
50 Ga0157377_10178697 3300014745 Bacteria 1333
51 Ga0163161_10409923 3300017792 Bacteria 1088
52 Ga0209437_100067 3300025233 Bacteria 317685
53 Ga0209646_1003164 3300025246 Bacteria 3321
54 Ga0209646_1007002 3300025246 Bacteria 1866
55 Ga0209026_1012576 3300025250 Bacteria 1469
56 Ga0209129_1025824 3300025258 Bacteria 1020
57 Ga0209233_1000088 3300025261 Bacteria 317980
58 Ga0209455_1012585 3300025272 Bacteria 2015
59 Ga0209673_1015621 3300025273 Bacteria 2873
60 Ga0209673_1053054 3300025273 Bacteria 1060
61 Ga0209025_1061426 3300025294 Bacteria 1402
62 Ga0209564_1016246 3300025295 Bacteria 2975
63 Ga0209564_1073360 3300025295 Bacteria 700
64 Ga0209256_1020956 3300025299 Bacteria 2024
65 Ga0207426_1015019 3300025302 Bacteria 2824
66 Ga0209051_1001099 3300025303 Bacteria 24879
67 Ga0207688_10298618 3300025901 Bacteria 984
68 Ga0207681_10165598 3300025923 Bacteria 1671
69 Ga0207644_10690256 3300025931 Bacteria 851
70 Ga0207668_10537502 3300025972 Bacteria 1011
71 Ga0207668_10832156 3300025972 Bacteria 819
72 Ga0207678_10103077 3300026067 Bacteria 2436
73 Ga0207708_10213795 3300026075 Bacteria 1542
74 Ga0207708_10308249 3300026075 Bacteria 1289
75 Ga0207702_10004644 3300026078 Bacteria 12146
76 Ga0207675_100387764 3300026118 Bacteria 1375
77 Ga0207428_10058752 3300027907 Bacteria 3051
78 Ga0268266_10005947 3300028379 Bacteria 11280
79 Ga0307513_10154755 3300031456 Bacteria 2195
80 Ga0307406_10096564 3300031901 Bacteria 2003
81 Ga0307412_10425838 3300031911 Bacteria 1087
82 Ga0307409_100220411 3300031995 Bacteria 1712
83 Ga0307416_100413377 3300032002 Bacteria 1391
84 Ga0307414_10258733 3300032004 Bacteria 1451
85 Ga0307411_10265574 3300032005 Bacteria 1358
86 Ga0307415_100427189 3300032126 Bacteria 1139
87 Ga0373950_0013934 3300034818 Unclassified 1347
88 Ga0373958_0035290 3300034819 Bacteria 1000
89 Ga0373928_0183686 3300035084 Unclassified 595
90 Ga0373929_0046171 3300035085 Bacteria 983
91 Ga0373940_0004728 3300035088 Bacteria 2899
92 Ga0373949_0004893 3300035090 Bacteria 3030
93 Ga0373932_0011829 3300035112 Bacteria 2139
94 Ga0373960_0018646 3300035121 Bacteria 1813
95 Ga0373960_0189824 3300035121 Unclassified 721
96 Ga0373942_0017165 3300035207 Bacteria 1783
97 Ga0373961_0006719 3300035241 Bacteria 2766
98 Ga0373962_0000810 3300035242 Bacteria 7149
99 Ga0373962_0006534 3300035242 Bacteria 2826
100 Ga0316574_0004257 3300035398 Bacteria 7477
101 Ga0373931_0000396 3300035691 Bacteria 17851
102 Ga0373931_0000718 3300035691 Bacteria 13735
103 Ga0373931_0037480 3300035691 Bacteria 2532
104 Ga0316582_0289431 3300036647 Bacteria 1125
105 Ga0436364_0771713 3300037853 Bacteria 1871
106 Ga0436364_1179289 3300037853 Bacteria 1709
107 Ga0237816_08080 3300039145 Bacteria 651
108 Ga0436360_0824491 3300039438 Bacteria 3839
109 Ga0436361_0458333 3300039447 Bacteria 1561
110 Ga0439438_027102 3300041405 Bacteria 1549
111 Ga0439439_0146776 3300041406 Bacteria 668
112 Ga0439449_0013532 3300042007 Bacteria 3070
113 Ga0439462_0115217 3300042015 Bacteria 745
114 Ga0466966_0239414 3300044684 Bacteria 1094
115 Ga0466971_0274370 3300044719 Bacteria 806
116 Ga0466970_0000741 3300044765 Bacteria 15890
117 Ga0466957_0003831 3300044842 Bacteria 8317
118 Ga0466959_0269234 3300045049 Bacteria 1171
119 Ga0466959_0376496 3300045049 Bacteria 966
120 Ga0466958_0002313 3300045836 Bacteria 9504
121 Ga0466967_0345522 3300045976 Bacteria 1439
122 Ga0495620_0125878 3300046515 Bacteria 1008
123 Ga0495637_0218855 3300046520 Bacteria 694
124 Ga0495598_0085180 3300046537 Bacteria 1021
125 Ga0495656_0552610 3300046615 Bacteria 614
126 Ga0496104_0047000 3300048907 Bacteria 4067
127 Ga0496105_0021209 3300048908 Bacteria 5257
128 Ga0496108_0834737 3300048911 Bacteria 794
129 Ga0496110_0143614 3300048913 Bacteria 2158
130 Ga0496113_0492203 3300048916 Bacteria 985
131 Ga0496116_0290791 3300048919 Bacteria 784
132 Ga0496117_0055588 3300048920 Bacteria 2765
133 Ga0496119_0013915 3300048922 Bacteria 6347
134 Ga0496119_0219580 3300048922 Bacteria 973
135 Ga0496120_0063460 3300048923 Bacteria 2055
136 Ga0496121_0054158 3300048924 Bacteria 3355
137 Ga0496122_0051457 3300048925 Bacteria 3129
138 Ga0496122_0129840 3300048925 Bacteria 1604
139 Ga0496123_0018947 3300048926 Bacteria 5444
140 Ga0496124_0011420 3300048927 Bacteria 8881
141 Ga0496124_0022786 3300048927 Bacteria 5733
142 Ga0496124_0033240 3300048927 Bacteria 4538
143 Ga0496124_0045705 3300048927 Bacteria 3753
144 Ga0496125_0073409 3300048928 Bacteria 2660
145 Ga0496125_0199056 3300048928 Bacteria 1314
146 Ga0496126_0179725 3300048929 Bacteria 1798
147 Ga0496126_0443541 3300048929 Bacteria 1046
148 Ga0501038_0057216 3300049574 Bacteria 3348
149 Ga0501039_0106131 3300049575 Bacteria 2194
150 Ga0501040_0057205 3300049576 Bacteria 2677
151 Ga0501043_0253586 3300049579 Bacteria 1355
152 Ga0501048_0084220 3300049582 Bacteria 2242
153 Ga0501067_0004340 3300049583 Bacteria 7808
154 Ga0501068_0716418 3300049584 Bacteria 655
155 Ga0501070_0632567 3300049586 Bacteria 851
156 Ga0501071_0581367 3300049587 Bacteria 861
157 Ga0501071_0889738 3300049587 Bacteria 687
158 Ga0501071_0911965 3300049587 Bacteria 678
159 Ga0501072_0210895 3300049588 Bacteria 1548
160 Ga0501072_0491950 3300049588 Bacteria 970
161 Ga0501073_0063679 3300049589 Bacteria 2572
162 Ga0501074_0012959 3300049590 Bacteria 6062
163 Ga0501076_0001576 3300049592 Bacteria 15313
164 Ga0501076_0288471 3300049592 Bacteria 1345
165 Ga0501077_0010099 3300049593 Bacteria 5877
166 Ga0501079_0363410 3300049741 Bacteria 1134
167 Ga0501079_1281448 3300049741 Bacteria 577
168 Ga0501080_0046640 3300049742 Bacteria 4034
169 Ga0501080_1405182 3300049742 Bacteria 595
170 Ga0501081_0023179 3300049743 Bacteria 4160
171 Ga0501081_0171445 3300049743 Bacteria 1567
172 Ga0501083_0149045 3300049744 Bacteria 1532
173 Ga0501083_0571545 3300049744 Bacteria 736
174 Ga0501044_0401082 3300049823 Bacteria 1284
175 Ga0501044_0893088 3300049823 Bacteria 764
176 Ga0501045_0446536 3300049824 Bacteria 961
177 nmdc:mga0yw44_754662_c1 3300050492 Bacteria 661
178 nmdc:mga05p37_401229_c1 3300050507 Bacteria 1601
179 nmdc:mga0qj67_221668_c1 3300050509 Bacteria 1535
180 nmdc:mga06r32_1020181_c1 3300050510 Bacteria 779
181 nmdc:mga06r32_754397_c1 3300050510 Bacteria 936
182 nmdc:mga08y16_487691_c1 3300050511 Bacteria 1253
183 nmdc:mga08y16_582341_c1 3300050511 Bacteria 1130
184 nmdc:mga08y16_73579_c1 3300050511 Bacteria 3561
185 nmdc:mga08y16_741219_c1 3300050511 Bacteria 979
186 nmdc:mga0n895_1600526_c1 3300050512 Unclassified 616
187 nmdc:mga0n895_8761_c1 3300050512 Bacteria 8796
188 nmdc:mga0rr50_8706_c1 3300050513 Bacteria 6328
189 nmdc:mga0a205_16437_c1 3300050515 Bacteria 6930
190 nmdc:mga0sz30_61857_c1 3300050516 Bacteria 1600
191 Ga0501084_0452719 3300054114 Bacteria 1085
192 Ga0501084_1062073 3300054114 Unclassified 680
193 Ga0501082_0030355 3300060353 Bacteria 4659
194 Ga0501082_0127336 3300060353 Bacteria 2209
195 2508734005 2508501050 Bacteria 9633614
196 2509110335 2508501122 Bacteria 6292184
197 2509377292 2509276019 Bacteria 6802256
198 2511185931 2510917028 Bacteria 6185411
199 2516207728 2516143018 Bacteria 6951533
200 2558862183 2558860100 Bacteria 8458965
201 2585204749 2582581294 Bacteria 6626667
202 2616552769 2615840698 Bacteria 7319877
203 2617380948 2617270742 Bacteria 6808054
204 2657684405 2657244999 Bacteria 5946535
205 2671114279 2667528174 Bacteria 6435400
206 2692315038 2690316117 Bacteria 6800650
207 2753461111 2751185821 Bacteria 6189929
208 2776258060 2775506901 Bacteria 9631051
209 2778174729 2775507266 Bacteria 7392367
210 2792620368 2791355091 Bacteria 6135441
211 2792625726 2791355092 Bacteria 6248105
212 2792641799 2791355094 Bacteria 7011481
213 2804754810 2802429268 Bacteria 6094027
214 2835317705 2835312727 Bacteria 7413381
215 2837654387 2837651117 Bacteria 3772164
216 2838030615 2838029111 Bacteria 6603031
217 2842477104 2842475841 Bacteria 6603183
218 2842503901 2842502639 Bacteria 6604161
219 2847419900 2847417321 Bacteria 6913799
220 2848994919 2848992105 Bacteria 6810864
221 2850085430 2850079185 Bacteria 6848280
222 2855877415 2855872281 Bacteria 6964271
223 2894239486 2894232714 Bacteria 8834183
224 2913295983 2913295892 Bacteria 6333755
225 2919412394 2919408235 Bacteria 6149349
226 2995396269 2995392953 Bacteria 4539380
227 3003669025 3003665799 Bacteria 7279786
228 643603155 643348564 Bacteria 8839022
229 643826805 643692032 Bacteria 6891900
230 8055436149 8055431914 Bacteria 4551896
231 Ga0501067_0159438
232 JGI25162J39368_1000476
233 JGI25154J39366_1020825
234 JGI25165J46597_1000068
235 Ga0055528_1011124
236 JGI25405J52794_10030826
237 Ga0070666_10397431
238 Ga0070691_10143856
239 Ga0070668_100883783
240 Ga0070669_100082062
241 Ga0070700_100019464
242 Ga0070694_100018399
243 Ga0070663_100144216
244 Ga0070678_100855446
245 Ga0070697_100254597
246 Ga0070695_100004197
247 Ga0070665_100056916
248 Ga0068856_100019578
249 Ga0081455_10000068
250 Ga0081455_10247228
251 Ga0081540_1008844
252 Ga0081540_1074497
253 Ga0075365_10027338
254 Ga0075363_100029334
255 Ga0070715_10033806
256 Ga0075362_10274956
257 Ga0075369_10002434
258 Ga0075428_100061951
259 Ga0075431_100604701
260 Ga0075431_100771049
261 Ga0075433_10004414
262 Ga0075433_10270079
263 Ga0075434_100003399
264 Ga0075435_100100852
265 Ga0111539_10020493
266 Ga0111539_10026493
267 Ga0111539_10215533
268 Ga0111539_10969068
269 Ga0111539_11101964
270 Ga0114129_10022605
271 Ga0105243_10182868
272 Ga0105248_10589433
273 Ga0105248_12192794
274 Ga0123340_1060526
275 Ga0123342_1032409
276 Ga0163162_11106355
277 Ga0163163_11403546
278 Ga0157380_10028249
279 Ga0157380_13257142
280 Ga0157377_10178697
281 Ga0163161_10409923
282 Ga0209437_100067
283 Ga0209646_1003164
284 Ga0209646_1007002
285 Ga0209026_1012576
286 Ga0209129_1025824
287 Ga0209233_1000088
288 Ga0209455_1012585
289 Ga0209673_1015621
290 Ga0209673_1053054
291 Ga0209025_1061426
292 Ga0209564_1016246
293 Ga0209564_1073360
294 Ga0209256_1020956
295 Ga0207426_1015019
296 Ga0209051_1001099
297 Ga0207688_10298618
298 Ga0207681_10165598
299 Ga0207644_10690256
300 Ga0207668_10537502
301 Ga0207668_10832156
302 Ga0207678_10103077
303 Ga0207708_10213795
304 Ga0207708_10308249
305 Ga0207702_10004644
306 Ga0207675_100387764
307 Ga0207428_10058752
308 Ga0268266_10005947
309 Ga0307513_10154755
310 Ga0307406_10096564
311 Ga0307412_10425838
312 Ga0307409_100220411
313 Ga0307416_100413377
314 Ga0307414_10258733
315 Ga0307411_10265574
316 Ga0307415_100427189
317 Ga0373950_0013934
318 Ga0373958_0035290
319 Ga0373928_0183686
320 Ga0373929_0046171
321 Ga0373940_0004728
322 Ga0373949_0004893
323 Ga0373932_0011829
324 Ga0373960_0018646
325 Ga0373960_0189824
326 Ga0373942_0017165
327 Ga0373961_0006719
328 Ga0373962_0000810
329 Ga0373962_0006534
330 Ga0316574_0004257
331 Ga0373931_0000396
332 Ga0373931_0000718
333 Ga0373931_0037480
334 Ga0316582_0289431
335 Ga0436364_0771713
336 Ga0436364_1179289
337 Ga0237816_08080
338 Ga0436360_0824491
339 Ga0436361_0458333
340 Ga0439438_027102
341 Ga0439439_0146776
342 Ga0439449_0013532
343 Ga0439462_0115217
344 Ga0466966_0239414
345 Ga0466971_0274370
346 Ga0466970_0000741
347 Ga0466957_0003831
348 Ga0466959_0269234
349 Ga0466959_0376496
350 Ga0466958_0002313
351 Ga0466967_0345522
352 Ga0495620_0125878
353 Ga0495637_0218855
354 Ga0495598_0085180
355 Ga0495656_0552610
356 Ga0496104_0047000
357 Ga0496105_0021209
358 Ga0496108_0834737
359 Ga0496110_0143614
360 Ga0496113_0492203
361 Ga0496116_0290791
362 Ga0496117_0055588
363 Ga0496119_0013915
364 Ga0496119_0219580
365 Ga0496120_0063460
366 Ga0496121_0054158
367 Ga0496122_0051457
368 Ga0496122_0129840
369 Ga0496123_0018947
370 Ga0496124_0011420
371 Ga0496124_0022786
372 Ga0496124_0033240
373 Ga0496124_0045705
374 Ga0496125_0073409
375 Ga0496125_0199056
376 Ga0496126_0179725
377 Ga0496126_0443541
378 Ga0501038_0057216
379 Ga0501039_0106131
380 Ga0501040_0057205
381 Ga0501043_0253586
382 Ga0501048_0084220
383 Ga0501067_0004340
384 Ga0501068_0716418
385 Ga0501070_0632567
386 Ga0501071_0581367
387 Ga0501071_0889738
388 Ga0501071_0911965
389 Ga0501072_0210895
390 Ga0501072_0491950
391 Ga0501073_0063679
392 Ga0501074_0012959
393 Ga0501076_0001576
394 Ga0501076_0288471
395 Ga0501077_0010099
396 Ga0501079_0363410
397 Ga0501079_1281448
398 Ga0501080_0046640
399 Ga0501080_1405182
400 Ga0501081_0023179
401 Ga0501081_0171445
402 Ga0501083_0149045
403 Ga0501083_0571545
404 Ga0501044_0401082
405 Ga0501044_0893088
406 Ga0501045_0446536
407 nmdc:mga0yw44_754662_c1
408 nmdc:mga05p37_401229_c1
409 nmdc:mga0qj67_221668_c1
410 nmdc:mga06r32_1020181_c1
411 nmdc:mga06r32_754397_c1
412 nmdc:mga08y16_487691_c1
413 nmdc:mga08y16_582341_c1
414 nmdc:mga08y16_73579_c1
415 nmdc:mga08y16_741219_c1
416 nmdc:mga0n895_1600526_c1
417 nmdc:mga0n895_8761_c1
418 nmdc:mga0rr50_8706_c1
419 nmdc:mga0a205_16437_c1
420 nmdc:mga0sz30_61857_c1
421 Ga0501084_0452719
422 Ga0501084_1062073
423 Ga0501082_0030355
424 Ga0501082_0127336
425 2508734005
426 2509110335
427 2509377292
428 2511185931
429 2516207728
430 2558862183
431 2585204749
432 2616552769
433 2617380948
434 2657684405
435 2671114279
436 2692315038
437 2753461111
438 2776258060
439 2778174729
440 2792620368
441 2792625726
442 2792641799
443 2804754810
444 2835317705
445 2837654387
446 2838030615
447 2842477104
448 2842503901
449 2847419900
450 2848994919
451 2850085430
452 2855877415
453 2894239486
454 2913295983
455 2919412394
456 2995396269
457 3003669025
458 643603155
459 643826805
460 8055436149

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03061

4HBT

Thioesterase superfamily

52

122

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fs2-assembly1.cif.gz_B structure of the e. coli paai protein from the phyenylacetic acid degradation operon 0.9797 8 143
2dsl-assembly1.cif.gz_A mutant n33d structure of phenylacetic acid degradation protein paai from thermus thermophilus hb8 0.9707 24 140
1wlu-assembly1.cif.gz_A crystal structure of tt0310 protein from thermus thermophilus hb8 0.9691 24 140
2dsl-assembly1.cif.gz_A mutant n33d structure of phenylacetic acid degradation protein paai from thermus thermophilus hb8 0.9625 24 140
2fs2-assembly1.cif.gz_B structure of the e. coli paai protein from the phyenylacetic acid degradation operon 0.9589 8 143
ID Description Score Start End Superfamily
2fs2B00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9759 8 143 3.10.129.10
1wluA00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9691 24 140 3.10.129.10
2fs2B00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9546 8 143 3.10.129.10
4xy5A00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9491 32 140 3.10.129.10
1wluA00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.945 24 140 3.10.129.10
ID Description Score Start End GO Terms
AF-A0A1A9EXB7-F1-model_v4 Phenylacetic acid degradation protein PaaD 0.9914 4 147 GO:0016289
AF-A0A6L8MMW8-F1-model_v4 Hydroxyphenylacetyl-CoA thioesterase PaaI 0.9901 8 145 GO:0016289
AF-A0A6N4T3C1-F1-model_v4 Phenylacetic acid degradation protein PaaD 0.9901 8 146 GO:0016289
AF-A0A4Q7VP23-F1-model_v4 Acyl-CoA thioesterase 0.99 8 146 GO:0016289
AF-A0A2G6JNR7-F1-model_v4 Phenylacetic acid degradation protein PaaD 0.99 9 146 GO:0016289

Map