F343036

General Info

Members Datasets Scaffolds Average Seq Length
230 165 460 227

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10102225|Ga0157380_101022252
Length 262
Sequence MEIQAACAAGLRRTRTQLSGAVNGFAHARWSEEDPMSENDAVDNLRQVQESIRRSASDYDRDPSSITLVAVSKTFPAEAIDPVLAAGQRIFGENYVQEAKAKWPALRERYDGVELHMIGPLQSNKAREAVELFDAIHTLDRPSLAEALAKEIAKQGKQPRLLVQVNTGEEPQKGGVIPTEVDAFLEACRSQYGLEIEGLMCIPPEEDPPSPHFALLNTIARKHGLKTLSMGMSADFDAAIQLGATHVRVGSAIFGARPRPAK

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
34 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
59 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
88 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
89 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
90 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
96 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
97 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
98 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
99 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
100 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
113 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
126 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
127 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
128 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
146 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
147 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
148 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
149 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 2508501050 Microvirga lupini Lut6 Isolate Nodule
153 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
154 2773857925 Microvirga vignae BR3299 Isolate Unclassified
155 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
156 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
157 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
158 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
159 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
160 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
161 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
162 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
163 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
164 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
165 3005452660 Rhizobium grahamii BG7 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.91
Metatranscriptomes 0
Isolates 6.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.26
Nodule 2.61
Rhizoplane 2.17
Rhizosphere 76.09
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10102225 3300014326 Bacteria 2390
2 JGI24735J21928_10004110 3300002067 Bacteria 4914
3 JGI24735J21928_10040630 3300002067 Bacteria 1357
4 JGI24735J21928_10080315 3300002067 Bacteria 934
5 Ga0055542_1002304 3300003762 Bacteria 6575
6 Ga0055526_1007240 3300003771 Bacteria 5821
7 Ga0065707_10081714 3300005295 Bacteria 75872
8 Ga0070658_10000265 3300005327 Bacteria 46194
9 Ga0070658_10002277 3300005327 Bacteria 16095
10 Ga0070658_10006018 3300005327 Bacteria 9841
11 Ga0070658_10006307 3300005327 Bacteria 9607
12 Ga0070658_10619329 3300005327 Bacteria 938
13 Ga0070676_10055180 3300005328 Bacteria 2344
14 Ga0070666_10219683 3300005335 Bacteria 1340
15 Ga0070660_100001781 3300005339 Bacteria 14791
16 Ga0070660_100001901 3300005339 Bacteria 14387
17 Ga0070660_100003352 3300005339 Bacteria 11011
18 Ga0070660_100031827 3300005339 Bacteria 3965
19 Ga0070660_100071782 3300005339 Bacteria 2704
20 Ga0070660_100078284 3300005339 Bacteria 2592
21 Ga0070660_100634197 3300005339 Bacteria 894
22 Ga0070661_100303112 3300005344 Bacteria 1244
23 Ga0070692_10003379 3300005345 Bacteria 6463
24 Ga0070692_10004141 3300005345 Bacteria 6001
25 Ga0070668_100518961 3300005347 Bacteria 1033
26 Ga0070659_100033172 3300005366 Bacteria 4009
27 Ga0070667_100129765 3300005367 Bacteria 2199
28 Ga0070667_100204226 3300005367 Bacteria 1754
29 Ga0070705_100197304 3300005440 Bacteria 1377
30 Ga0070694_100038072 3300005444 Bacteria 3193
31 Ga0070663_100014553 3300005455 Bacteria 5053
32 Ga0070662_100043069 3300005457 Bacteria 3228
33 Ga0068867_100376325 3300005459 Bacteria 1192
34 Ga0068853_100109420 3300005539 Bacteria 2453
35 Ga0070695_100004849 3300005545 Bacteria 7919
36 Ga0070665_100224902 3300005548 Bacteria 1877
37 Ga0070704_100133980 3300005549 Bacteria 1925
38 Ga0068855_100001911 3300005563 Bacteria 25840
39 Ga0068855_100110308 3300005563 Bacteria 3159
40 Ga0068855_100292148 3300005563 Bacteria 1807
41 Ga0070664_100040574 3300005564 Bacteria 3925
42 Ga0070664_100502508 3300005564 Bacteria 1117
43 Ga0068857_100039114 3300005577 Bacteria 4201
44 Ga0068854_100398540 3300005578 Bacteria 1138
45 Ga0068852_100001909 3300005616 Bacteria 14186
46 Ga0068852_100172039 3300005616 Bacteria 2031
47 Ga0068863_100001870 3300005841 Bacteria 20922
48 Ga0068860_100516538 3300005843 Bacteria 1194
49 Ga0068860_101004626 3300005843 Bacteria 852
50 Ga0068862_100006683 3300005844 Bacteria 9568
51 Ga0081455_10027377 3300005937 Bacteria 5224
52 Ga0081455_10258128 3300005937 Bacteria 1270
53 Ga0075367_10325255 3300006178 Bacteria 969
54 Ga0075369_10004359 3300006186 Bacteria 5220
55 Ga0075369_10201593 3300006186 Bacteria 918
56 Ga0075366_10044398 3300006195 Bacteria 2634
57 Ga0075366_10094110 3300006195 Bacteria 1796
58 Ga0075370_10038951 3300006353 Bacteria 2677
59 Ga0068871_100243830 3300006358 Bacteria 1563
60 Ga0075428_100023291 3300006844 Bacteria 6852
61 Ga0075428_100487391 3300006844 Bacteria 1319
62 Ga0075430_100000274 3300006846 Bacteria 36446
63 Ga0075431_100121747 3300006847 Bacteria 2692
64 Ga0105245_10004355 3300009098 Bacteria 12530
65 Ga0114129_10168840 3300009147 Bacteria 2984
66 Ga0114129_10672198 3300009147 Bacteria 1334
67 Ga0105243_10000267 3300009148 Bacteria 58724
68 Ga0105243_10873660 3300009148 Bacteria 892
69 Ga0105242_10003607 3300009176 Bacteria 12039
70 Ga0105237_10241905 3300009545 Bacteria 1806
71 Ga0105237_10480155 3300009545 Bacteria 1249
72 Ga0105238_10036676 3300009551 Bacteria 4985
73 Ga0105249_10015770 3300009553 Bacteria 6693
74 Ga0105246_10028380 3300011119 Bacteria 3676
75 Ga0157373_10031777 3300013100 Bacteria 3800
76 Ga0157373_10293964 3300013100 Bacteria 1152
77 Ga0157371_10001649 3300013102 Bacteria 22765
78 Ga0157370_10098335 3300013104 Bacteria 2744
79 Ga0157374_10002642 3300013296 Bacteria 15099
80 Ga0157378_10003125 3300013297 Bacteria 14717
81 Ga0157372_10139168 3300013307 Bacteria 2796
82 Ga0157372_10242932 3300013307 Bacteria 2089
83 Ga0157375_10004260 3300013308 Bacteria 12406
84 Ga0157380_10000292 3300014326 Bacteria 30110
85 Ga0157377_10009932 3300014745 Bacteria 4693
86 Ga0157376_10000595 3300014969 Bacteria 23367
87 Ga0209026_1007498 3300025250 Bacteria 2444
88 Ga0209148_1000114 3300025254 Bacteria 192073
89 Ga0209148_1003498 3300025254 Bacteria 4305
90 Ga0209455_1000599 3300025272 Bacteria 23019
91 Ga0207688_10267361 3300025901 Bacteria 1039
92 Ga0207647_10001049 3300025904 Bacteria 21361
93 Ga0207647_10027335 3300025904 Bacteria 3719
94 Ga0207647_10069176 3300025904 Bacteria 2134
95 Ga0207647_10069317 3300025904 Bacteria 2132
96 Ga0207705_10000014 3300025909 Bacteria 434286
97 Ga0207705_10000583 3300025909 Bacteria 30635
98 Ga0207705_10001395 3300025909 Bacteria 19248
99 Ga0207705_10011902 3300025909 Bacteria 6285
100 Ga0207705_10011969 3300025909 Bacteria 6268
101 Ga0207705_10060490 3300025909 Bacteria 2736
102 Ga0207705_10097403 3300025909 Bacteria 2160
103 Ga0207705_10421130 3300025909 Bacteria 1034
104 Ga0207707_10493837 3300025912 Bacteria 1044
105 Ga0207671_10460297 3300025914 Bacteria 1013
106 Ga0207657_10000120 3300025919 Bacteria 78496
107 Ga0207657_10000159 3300025919 Bacteria 69260
108 Ga0207657_10002418 3300025919 Bacteria 20170
109 Ga0207657_10006695 3300025919 Bacteria 11911
110 Ga0207657_10012299 3300025919 Bacteria 8457
111 Ga0207657_10018966 3300025919 Bacteria 6546
112 Ga0207657_10026391 3300025919 Bacteria 5340
113 Ga0207657_10059126 3300025919 Bacteria 3296
114 Ga0207649_10031564 3300025920 Bacteria 3150
115 Ga0207652_10058609 3300025921 Bacteria 3318
116 Ga0207681_10186288 3300025923 Bacteria 1585
117 Ga0207659_10146488 3300025926 Bacteria 1839
118 Ga0207690_10186667 3300025932 Bacteria 1565
119 Ga0207706_10029964 3300025933 Bacteria 4856
120 Ga0207706_10043774 3300025933 Bacteria 3967
121 Ga0207709_10248683 3300025935 Bacteria 1297
122 Ga0207679_10040064 3300025945 Bacteria 3351
123 Ga0207667_10000314 3300025949 Bacteria 67212
124 Ga0207667_10147781 3300025949 Bacteria 2419
125 Ga0207658_10101936 3300025986 Bacteria 2250
126 Ga0207641_10076048 3300026088 Bacteria 2901
127 Ga0207698_10000466 3300026142 Bacteria 23506
128 Ga0268266_10739048 3300028379 Bacteria 949
129 Ga0265338_10494315 3300028800 Bacteria 862
130 Ga0307413_10191231 3300031824 Bacteria 1470
131 Ga0307413_10773189 3300031824 Bacteria 805
132 Ga0307410_10210541 3300031852 Bacteria 1489
133 Ga0307410_11048807 3300031852 Bacteria 705
134 Ga0307406_10068232 3300031901 Bacteria 2321
135 Ga0307412_10198405 3300031911 Bacteria 1522
136 Ga0307416_100590704 3300032002 Bacteria 1189
137 Ga0307414_10635344 3300032004 Bacteria 961
138 Ga0373945_0246313 3300035116 Bacteria 754
139 Ga0373957_0052513 3300035120 Bacteria 1562
140 Ga0373924_0166459 3300035410 Bacteria 968
141 Ga0395899_0000129 3300037312 Bacteria 118043
142 Ga0395900_0000468 3300037418 Bacteria 57784
143 Ga0395898_0004963 3300037466 Bacteria 14443
144 Ga0395905_0036576 3300037471 Bacteria 4611
145 Ga0395905_0059848 3300037471 Bacteria 3561
146 Ga0395905_0073422 3300037471 Bacteria 3207
147 Ga0395905_0107832 3300037471 Bacteria 2615
148 Ga0395905_0274851 3300037471 Bacteria 1570
149 Ga0395905_0994709 3300037471 Bacteria 742
150 Ga0395901_0000031 3300038443 Bacteria 241733
151 Ga0395901_0974476 3300038443 Bacteria 825
152 Ga0400483_186547 3300039062 Bacteria 1828
153 Ga0451798_1023548 3300041458 Bacteria 755
154 Ga0451806_192809 3300041462 Bacteria 951
155 Ga0451853_0887510 3300041512 Bacteria 1249
156 Ga0466963_0020064 3300044694 Bacteria 4200
157 Ga0466968_0233757 3300044735 Bacteria 869
158 Ga0466959_0001462 3300045049 Bacteria 14472
159 Ga0451576_0024107 3300045051 Bacteria 6574
160 Ga0495592_0036648 3300046454 Bacteria 3692
161 Ga0495651_0021551 3300046462 Bacteria 5008
162 Ga0495653_0103456 3300046463 Bacteria 2059
163 Ga0495608_0190094 3300046511 Bacteria 1296
164 Ga0495628_0257049 3300046516 Bacteria 1302
165 Ga0495630_0383028 3300046517 Bacteria 1077
166 Ga0495587_0034908 3300046536 Bacteria 3031
167 Ga0495667_0033063 3300046559 Bacteria 3461
168 Ga0495634_0241838 3300046642 Bacteria 1107
169 Ga0495599_0130561 3300046678 Bacteria 1560
170 Ga0495623_0008866 3300046679 Bacteria 6528
171 Ga0495658_0123061 3300046683 Bacteria 1571
172 Ga0495670_0003066 3300046691 Bacteria 8243
173 Ga0495676_0421853 3300047321 Bacteria 883
174 Ga0495680_0061689 3300047322 Bacteria 2883
175 Ga0495602_0071135 3300048088 Bacteria 2972
176 Ga0496100_0044280 3300048903 Bacteria 2850
177 Ga0496104_0545880 3300048907 Bacteria 1070
178 Ga0496107_0050241 3300048910 Bacteria 3006
179 Ga0496117_0062561 3300048920 Bacteria 2550
180 Ga0496117_0091307 3300048920 Bacteria 1959
181 Ga0496117_0275481 3300048920 Bacteria 904
182 Ga0496118_0060426 3300048921 Bacteria 2814
183 Ga0496118_0107950 3300048921 Bacteria 1857
184 Ga0496118_0143446 3300048921 Bacteria 1509
185 Ga0496119_0033116 3300048922 Bacteria 3433
186 Ga0496120_0046111 3300048923 Bacteria 2520
187 Ga0496121_0021098 3300048924 Bacteria 6400
188 Ga0496121_0078280 3300048924 Bacteria 2629
189 Ga0496122_0020163 3300048925 Bacteria 6046
190 Ga0496123_0032831 3300048926 Bacteria 3748
191 Ga0496124_0544908 3300048927 Bacteria 767
192 Ga0496125_0030580 3300048928 Bacteria 4814
193 Ga0496125_0405866 3300048928 Bacteria 795
194 Ga0496126_0051162 3300048929 Bacteria 3762
195 Ga0501034_0005426 3300049571 Bacteria 13941
196 Ga0501039_0433743 3300049575 Bacteria 1032
197 Ga0501041_0098087 3300049577 Bacteria 1812
198 Ga0501046_0239630 3300049580 Bacteria 1338
199 Ga0501072_0283508 3300049588 Bacteria 1317
200 Ga0501075_0045437 3300049591 Bacteria 3297
201 Ga0501045_0047064 3300049824 Bacteria 3141
202 nmdc:mga0k408_470586_c1 3300050493 Bacteria 746
203 nmdc:mga07m45_110356_c1 3300050496 Bacteria 1584
204 nmdc:mga05p37_347816_c1 3300050507 Bacteria 1355
205 nmdc:mga05p37_683844_c1 3300050507 Bacteria 1143
206 nmdc:mga0qj67_347_c1 3300050509 Bacteria 31880
207 nmdc:mga0qj67_53105_c1 3300050509 Bacteria 3208
208 nmdc:mga0sz30_24626_c1 3300050516 Bacteria 2457
209 Ga0495601_0036612 3300053077 Bacteria 3065
210 Ga0495619_0073600 3300053085 Bacteria 2289
211 Ga0500643_002768 3300053087 Bacteria 8777
212 Ga0500566_0030552 3300053094 Bacteria 3141
213 Ga0500555_038078 3300053103 Bacteria 1346
214 Ga0500577_0007055 3300053142 Bacteria 3134
215 Ga0500616_0008760 3300053153 Bacteria 6234
216 Ga0501082_0102115 3300060353 Bacteria 2481
217 2508734611 2508501050 Bacteria 9633614
218 2509075016 2508501114 Bacteria 7082538
219 2774869325 2773857925 Bacteria 6472445
220 2776257486 2775506901 Bacteria 9631051
221 2835318251 2835312727 Bacteria 7413381
222 2841912494 2841911363 Bacteria 6173697
223 2841918249 2841917233 Bacteria 6173500
224 2882458634 2882456835 Bacteria 6863978
225 2884298383 2884298095 Bacteria 3823049
226 2889917324 2889914905 Bacteria 5702301
227 2894235774 2894232714 Bacteria 8834183
228 2995394313 2995392953 Bacteria 4539380
229 3003669700 3003665799 Bacteria 7279786
230 3005456132 3005452660 Bacteria 5889319
231 Ga0157380_10102225
232 JGI24735J21928_10004110
233 JGI24735J21928_10040630
234 JGI24735J21928_10080315
235 Ga0055542_1002304
236 Ga0055526_1007240
237 Ga0065707_10081714
238 Ga0070658_10000265
239 Ga0070658_10002277
240 Ga0070658_10006018
241 Ga0070658_10006307
242 Ga0070658_10619329
243 Ga0070676_10055180
244 Ga0070666_10219683
245 Ga0070660_100001781
246 Ga0070660_100001901
247 Ga0070660_100003352
248 Ga0070660_100031827
249 Ga0070660_100071782
250 Ga0070660_100078284
251 Ga0070660_100634197
252 Ga0070661_100303112
253 Ga0070692_10003379
254 Ga0070692_10004141
255 Ga0070668_100518961
256 Ga0070659_100033172
257 Ga0070667_100129765
258 Ga0070667_100204226
259 Ga0070705_100197304
260 Ga0070694_100038072
261 Ga0070663_100014553
262 Ga0070662_100043069
263 Ga0068867_100376325
264 Ga0068853_100109420
265 Ga0070695_100004849
266 Ga0070665_100224902
267 Ga0070704_100133980
268 Ga0068855_100001911
269 Ga0068855_100110308
270 Ga0068855_100292148
271 Ga0070664_100040574
272 Ga0070664_100502508
273 Ga0068857_100039114
274 Ga0068854_100398540
275 Ga0068852_100001909
276 Ga0068852_100172039
277 Ga0068863_100001870
278 Ga0068860_100516538
279 Ga0068860_101004626
280 Ga0068862_100006683
281 Ga0081455_10027377
282 Ga0081455_10258128
283 Ga0075367_10325255
284 Ga0075369_10004359
285 Ga0075369_10201593
286 Ga0075366_10044398
287 Ga0075366_10094110
288 Ga0075370_10038951
289 Ga0068871_100243830
290 Ga0075428_100023291
291 Ga0075428_100487391
292 Ga0075430_100000274
293 Ga0075431_100121747
294 Ga0105245_10004355
295 Ga0114129_10168840
296 Ga0114129_10672198
297 Ga0105243_10000267
298 Ga0105243_10873660
299 Ga0105242_10003607
300 Ga0105237_10241905
301 Ga0105237_10480155
302 Ga0105238_10036676
303 Ga0105249_10015770
304 Ga0105246_10028380
305 Ga0157373_10031777
306 Ga0157373_10293964
307 Ga0157371_10001649
308 Ga0157370_10098335
309 Ga0157374_10002642
310 Ga0157378_10003125
311 Ga0157372_10139168
312 Ga0157372_10242932
313 Ga0157375_10004260
314 Ga0157380_10000292
315 Ga0157377_10009932
316 Ga0157376_10000595
317 Ga0209026_1007498
318 Ga0209148_1000114
319 Ga0209148_1003498
320 Ga0209455_1000599
321 Ga0207688_10267361
322 Ga0207647_10001049
323 Ga0207647_10027335
324 Ga0207647_10069176
325 Ga0207647_10069317
326 Ga0207705_10000014
327 Ga0207705_10000583
328 Ga0207705_10001395
329 Ga0207705_10011902
330 Ga0207705_10011969
331 Ga0207705_10060490
332 Ga0207705_10097403
333 Ga0207705_10421130
334 Ga0207707_10493837
335 Ga0207671_10460297
336 Ga0207657_10000120
337 Ga0207657_10000159
338 Ga0207657_10002418
339 Ga0207657_10006695
340 Ga0207657_10012299
341 Ga0207657_10018966
342 Ga0207657_10026391
343 Ga0207657_10059126
344 Ga0207649_10031564
345 Ga0207652_10058609
346 Ga0207681_10186288
347 Ga0207659_10146488
348 Ga0207690_10186667
349 Ga0207706_10029964
350 Ga0207706_10043774
351 Ga0207709_10248683
352 Ga0207679_10040064
353 Ga0207667_10000314
354 Ga0207667_10147781
355 Ga0207658_10101936
356 Ga0207641_10076048
357 Ga0207698_10000466
358 Ga0268266_10739048
359 Ga0265338_10494315
360 Ga0307413_10191231
361 Ga0307413_10773189
362 Ga0307410_10210541
363 Ga0307410_11048807
364 Ga0307406_10068232
365 Ga0307412_10198405
366 Ga0307416_100590704
367 Ga0307414_10635344
368 Ga0373945_0246313
369 Ga0373957_0052513
370 Ga0373924_0166459
371 Ga0395899_0000129
372 Ga0395900_0000468
373 Ga0395898_0004963
374 Ga0395905_0036576
375 Ga0395905_0059848
376 Ga0395905_0073422
377 Ga0395905_0107832
378 Ga0395905_0274851
379 Ga0395905_0994709
380 Ga0395901_0000031
381 Ga0395901_0974476
382 Ga0400483_186547
383 Ga0451798_1023548
384 Ga0451806_192809
385 Ga0451853_0887510
386 Ga0466963_0020064
387 Ga0466968_0233757
388 Ga0466959_0001462
389 Ga0451576_0024107
390 Ga0495592_0036648
391 Ga0495651_0021551
392 Ga0495653_0103456
393 Ga0495608_0190094
394 Ga0495628_0257049
395 Ga0495630_0383028
396 Ga0495587_0034908
397 Ga0495667_0033063
398 Ga0495634_0241838
399 Ga0495599_0130561
400 Ga0495623_0008866
401 Ga0495658_0123061
402 Ga0495670_0003066
403 Ga0495676_0421853
404 Ga0495680_0061689
405 Ga0495602_0071135
406 Ga0496100_0044280
407 Ga0496104_0545880
408 Ga0496107_0050241
409 Ga0496117_0062561
410 Ga0496117_0091307
411 Ga0496117_0275481
412 Ga0496118_0060426
413 Ga0496118_0107950
414 Ga0496118_0143446
415 Ga0496119_0033116
416 Ga0496120_0046111
417 Ga0496121_0021098
418 Ga0496121_0078280
419 Ga0496122_0020163
420 Ga0496123_0032831
421 Ga0496124_0544908
422 Ga0496125_0030580
423 Ga0496125_0405866
424 Ga0496126_0051162
425 Ga0501034_0005426
426 Ga0501039_0433743
427 Ga0501041_0098087
428 Ga0501046_0239630
429 Ga0501072_0283508
430 Ga0501075_0045437
431 Ga0501045_0047064
432 nmdc:mga0k408_470586_c1
433 nmdc:mga07m45_110356_c1
434 nmdc:mga05p37_347816_c1
435 nmdc:mga05p37_683844_c1
436 nmdc:mga0qj67_347_c1
437 nmdc:mga0qj67_53105_c1
438 nmdc:mga0sz30_24626_c1
439 Ga0495601_0036612
440 Ga0495619_0073600
441 Ga0500643_002768
442 Ga0500566_0030552
443 Ga0500555_038078
444 Ga0500577_0007055
445 Ga0500616_0008760
446 Ga0501082_0102115
447 2508734611
448 2509075016
449 2774869325
450 2776257486
451 2835318251
452 2841912494
453 2841918249
454 2882458634
455 2884298383
456 2889917324
457 2894235774
458 2995394313
459 3003669700
460 3005456132

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

43

258

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r79-assembly3.cif.gz_A-2 crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9814 7 223
3r79-assembly3.cif.gz_B crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9755 8 223
3r79-assembly3.cif.gz_B crystal structure of an uncharactertized protein from agrobacterium tumefaciens 0.9408 8 223
1w8g-assembly1.cif.gz_A crystal structure of e. coli k-12 yggs 0.9393 8 222
7ubp-assembly1.cif.gz_A the crystal structure of the k36a/k137a double mutant of e. coli yggs in complex with plp 0.9377 8 222
ID Description Score Start End Superfamily
3r79B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9687 8 223 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9393 8 222 3.20.20.10
3r79B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9339 8 223 3.20.20.10
af_Q9Z2Y8_11_258_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9073 7 225 3.20.20.10
af_P9WFQ7_2_257_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9039 2 223 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A529LS87-F1-model_v4 YggS family pyridoxal phosphate-dependent enzyme 1.002 36 133 GO:0030170
AF-A0A530A2Q8-F1-model_v4 YggS family pyridoxal phosphate-dependent enzyme 0.9936 12 133 GO:0030170
AF-A0A494TBT3-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9919 8 223 GO:0030170
AF-A0A2N3DP75-F1-model_v4 YggS family pyridoxal phosphate-dependent enzyme 0.9909 80 223 GO:0030170
AF-A0A0J6T7P6-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9878 8 223 GO:0030170

Map