F342267

General Info

Members Datasets Scaffolds Average Seq Length
229 162 206 740

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0023348|Ga0453684_0023348_4428_6914
Length 828
Sequence MRTIEQLPKASMNTAALSDIRLQVTGMTCASCVMRVEKSLKAVPGVRQASVNLATEQASVSAEPSVTADTLAAAVRKAGYDVATTETTLLVEGMTCASCVARVEKALRKVPGVSGATVNLATEKASIQALSTVPVAALKAAIEKAGYGAKDVQEAKSQSTPRLPAWWPVAVSGALTLPLVLPMLLQLFGIDWMLDGWLQLALATPVQFWLGWRFYRAGWKALLAKTGNMDLLVALGTSAAYGLSVYLLFKHAAHGMPHLYFEASAAVVTLVLLGKWLEQRAKRQTADAIRALNALRPTTARVRRNDVEMDVPVEQVVVGDLVIVRPGDRVAVDGDIVEGRSHIDESLITGESLPVAKSVGDKVTGGAINAEGALTVRTTAIGAETTLARIIRMVESAQAGKAPIQRIVDRVSAVFVPVVLVIALLTFLAWFGFTGDWEQALINAVAVLVIACPCALGLATPTAIMAGTGIAARHGILIKDAEALEVAHAVTVVAFDKTGTLTEGKPSLAAVVAAEGSTRDEVLGLAAALQKSSSHPLALAVMDQVRHERLLVPEAHDAQALPGRGLQGVVRGQTLALGSTRLLRELGLEEGRLHAEAQRLEQQGRTVSWLVQSDSGQQQLLGLLAFGDTVKPAAAEAVSRLHQLGIRTVMLTGDNRGAAEAVAKELGITDVRAEVLPGDKAAIVKELRDAGEVVAFVGDGLNDGPALAAASVSYAMAGGADVATETAGITLMRGDPRLVADSLDISRRTYSKIKQGLFWAFGYNVLGIPLAALGLLNPVIAGAAMAFSSVSVVLNALTLSRWRGVADRRAAEPANQQPQIVAALGELR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
3 2643221585 Pelomonas sp. Root662 Isolate Unclassified
4 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
5 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
6 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
7 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
8 2643221656 Pelomonas sp. Root405 Isolate Unclassified
9 2643221660 Methylibium sp. Root1272 Isolate Unclassified
10 2738541337 Pelomonas sp. BT06 Isolate Unclassified
11 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
12 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
13 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
14 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
15 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
16 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
17 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
18 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
19 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
20 2919688452 Pararheinheimera soli 4138 Isolate Unclassified
21 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
22 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
23 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
24 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
25 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
26 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
27 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
28 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
29 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
30 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
31 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
32 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
33 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
34 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
37 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
38 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
39 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
40 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
41 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
42 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
43 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
44 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
54 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
105 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
106 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
109 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
110 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
113 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
121 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
122 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
126 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
149 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
150 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
154 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
158 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
162 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.96
Metatranscriptomes 0
Isolates 10.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.9
Nodule 0.44
Rhizoplane 0.87
Rhizosphere 62.88
Stem 0
Stem Tuber 0
Unclassified 17.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2832676 2162886007 Bacteria 3958
2 rootL2_10013604 3300003322 Bacteria 8555
3 rootL2_10018686 3300003322 Bacteria 10205
4 Ga0055525_1000053 3300003759 Bacteria 218067
5 Ga0055524_1007399 3300003775 Bacteria 4669
6 Ga0055530_10001110 3300003791 Bacteria 21052
7 Ga0055540_1000004 3300003792 Bacteria 395545
8 Ga0055531_10000002 3300003794 Bacteria 421971
9 Ga0055531_10003559 3300003794 Bacteria 9890
10 Ga0055531_10005400 3300003794 Bacteria 7490
11 Ga0065704_10073154 3300005289 Bacteria 7523
12 Ga0070690_100000684 3300005330 Bacteria 17350
13 Ga0070670_100002700 3300005331 Bacteria 14659
14 Ga0070666_10000430 3300005335 Bacteria 25798
15 Ga0068868_100000640 3300005338 Bacteria 23577
16 Ga0070675_100000123 3300005354 Bacteria 45740
17 Ga0070675_100005047 3300005354 Bacteria 10077
18 Ga0070671_100004938 3300005355 Bacteria 10608
19 Ga0070671_100007350 3300005355 Bacteria 8799
20 Ga0070673_100013456 3300005364 Bacteria 5660
21 Ga0070673_100027061 3300005364 Bacteria 4246
22 Ga0070688_100026200 3300005365 Bacteria 3462
23 Ga0070667_100001101 3300005367 Bacteria 24774
24 Ga0070667_100001640 3300005367 Bacteria 20011
25 Ga0070678_100000510 3300005456 Bacteria 18765
26 Ga0070662_100005863 3300005457 Bacteria 7884
27 Ga0068867_100000021 3300005459 Bacteria 92798
28 Ga0068867_100003315 3300005459 Bacteria 11343
29 Ga0068867_100006840 3300005459 Bacteria 8060
30 Ga0068867_100012169 3300005459 Bacteria 6079
31 Ga0070706_100005377 3300005467 Bacteria 12198
32 Ga0070707_100032232 3300005468 Bacteria 4992
33 Ga0070698_100070619 3300005471 Bacteria 3504
34 Ga0070672_100036190 3300005543 Bacteria 3759
35 Ga0070664_100005484 3300005564 Bacteria 10186
36 Ga0068857_100011441 3300005577 Bacteria 7721
37 Ga0068852_100038051 3300005616 Bacteria 4040
38 Ga0068859_100004919 3300005617 Bacteria 13588
39 Ga0068864_100000878 3300005618 Bacteria 25306
40 Ga0068863_100000467 3300005841 Bacteria 41293
41 Ga0068863_100025974 3300005841 Bacteria 5588
42 Ga0068858_100001402 3300005842 Bacteria 24774
43 Ga0075363_100004208 3300006048 Bacteria 6250
44 Ga0075363_100017945 3300006048 Bacteria 3517
45 Ga0075367_10004890 3300006178 Bacteria 6598
46 Ga0075366_10003565 3300006195 Bacteria 8235
47 Ga0075366_10003661 3300006195 Bacteria 8147
48 Ga0075366_10008744 3300006195 Bacteria 5638
49 Ga0075366_10011399 3300006195 Bacteria 5019
50 Ga0075366_10013995 3300006195 Bacteria 4576
51 Ga0075370_10000288 3300006353 Bacteria 18082
52 Ga0075370_10004962 3300006353 Bacteria 6540
53 Ga0097620_100004919 3300006931 Bacteria 13588
54 Ga0105240_10009863 3300009093 Bacteria 13481
55 Ga0105240_10043620 3300009093 Bacteria 5705
56 Ga0105248_10019362 3300009177 Bacteria 7532
57 Ga0105237_10001179 3300009545 Bacteria 34921
58 Ga0105239_10000663 3300010375 Bacteria 49003
59 Ga0157370_10000470 3300013104 Bacteria 50271
60 Ga0157374_10005270 3300013296 Bacteria 10851
61 Ga0157374_10051719 3300013296 Bacteria 3823
62 Ga0163163_10002044 3300014325 Bacteria 17048
63 Ga0157377_10000021 3300014745 Bacteria 147105
64 Ga0157379_10001025 3300014968 Bacteria 22720
65 Ga0157379_10024802 3300014968 Bacteria 5323
66 Ga0157379_10096695 3300014968 Bacteria 2650
67 Ga0183362_10001 3300015683 Bacteria 2046624
68 Ga0163161_10015311 3300017792 Bacteria 5346
69 Ga0213872_10002822 3300021361 Bacteria 9942
70 Ga0209563_100014 3300025230 Bacteria 940582
71 Ga0209676_1002835 3300025292 Bacteria 11469
72 Ga0209025_1000562 3300025294 Bacteria 68180
73 Ga0209050_1000966 3300025298 Bacteria 37051
74 Ga0209256_1000457 3300025299 Bacteria 61666
75 Ga0209256_1001133 3300025299 Bacteria 30376
76 Ga0209051_1000016 3300025303 Bacteria 541891
77 Ga0209257_1000049 3300025304 Bacteria 441224
78 Ga0209257_1000065 3300025304 Bacteria 353604
79 Ga0209257_1000115 3300025304 Bacteria 230858
80 Ga0209257_1000529 3300025304 Bacteria 66275
81 Ga0207656_10009370 3300025321 Bacteria 3637
82 Ga0207682_10000730 3300025893 Bacteria 15257
83 Ga0207680_10000359 3300025903 Bacteria 21839
84 Ga0207645_10014479 3300025907 Bacteria 5277
85 Ga0207705_10011517 3300025909 Bacteria 6396
86 Ga0207684_10003714 3300025910 Bacteria 14783
87 Ga0207695_10054426 3300025913 Bacteria 4179
88 Ga0207671_10004838 3300025914 Bacteria 12684
89 Ga0207681_10002861 3300025923 Bacteria 10908
90 Ga0207659_10001934 3300025926 Bacteria 12284
91 Ga0207644_10011192 3300025931 Bacteria 5929
92 Ga0207644_10020443 3300025931 Bacteria 4501
93 Ga0207706_10009927 3300025933 Bacteria 8729
94 Ga0207691_10005253 3300025940 Bacteria 12504
95 Ga0207711_10005885 3300025941 Bacteria 10353
96 Ga0207667_10001925 3300025949 Bacteria 26046
97 Ga0207651_10007790 3300025960 Bacteria 5728
98 Ga0207658_10001138 3300025986 Bacteria 21341
99 Ga0207658_10004068 3300025986 Bacteria 10212
100 Ga0207677_10002422 3300026023 Bacteria 9788
101 Ga0207703_10001258 3300026035 Bacteria 23668
102 Ga0207641_10006953 3300026088 Bacteria 9470
103 Ga0207648_10000397 3300026089 Bacteria 48343
104 Ga0207648_10002589 3300026089 Bacteria 19365
105 Ga0207648_10004957 3300026089 Bacteria 13540
106 Ga0207648_10011736 3300026089 Bacteria 8240
107 Ga0207676_10000317 3300026095 Bacteria 41377
108 Ga0207674_10011853 3300026116 Bacteria 9774
109 Ga0207683_10001602 3300026121 Bacteria 20345
110 Ga0207683_10008758 3300026121 Bacteria 8638
111 Ga0209970_1000326 3300027614 Bacteria 7925
112 Ga0307517_10000122 3300028786 Bacteria 116429
113 Ga0307515_10001540 3300028794 Bacteria 51551
114 Ga0307515_10002116 3300028794 Bacteria 43530
115 Ga0307515_10007089 3300028794 Bacteria 22262
116 Ga0307515_10010522 3300028794 Bacteria 17722
117 Ga0307512_10048484 3300030522 Bacteria 3439
118 Ga0265332_10000133 3300031238 Bacteria 61695
119 Ga0265328_10010359 3300031239 Bacteria 3757
120 Ga0265327_10000058 3300031251 Bacteria 237043
121 Ga0265327_10001075 3300031251 Bacteria 38065
122 Ga0265316_10000580 3300031344 Bacteria 40906
123 Ga0307513_10017454 3300031456 Bacteria 8607
124 Ga0307513_10022781 3300031456 Bacteria 7350
125 Ga0307509_10000168 3300031507 Bacteria 103047
126 Ga0307509_10000930 3300031507 Bacteria 50124
127 Ga0307509_10021493 3300031507 Bacteria 7292
128 Ga0307408_100000039 3300031548 Bacteria 177825
129 Ga0307508_10000909 3300031616 Bacteria 34527
130 Ga0307514_10001289 3300031649 Bacteria 32516
131 Ga0265314_10004648 3300031711 Bacteria 12625
132 Ga0307516_10002516 3300031730 Bacteria 24408
133 Ga0307516_10040986 3300031730 Bacteria 4605
134 Ga0307412_10006575 3300031911 Bacteria 6583
135 Ga0307414_10002937 3300032004 Bacteria 9009
136 Ga0307414_10007762 3300032004 Bacteria 6046
137 Ga0307411_10000076 3300032005 Bacteria 30437
138 Ga0307415_100020261 3300032126 Bacteria 4058
139 Ga0307510_10002041 3300033180 Bacteria 22830
140 Ga0307510_10004457 3300033180 Bacteria 16467
141 Ga0307510_10074527 3300033180 Bacteria 3352
142 Ga0373931_0026430 3300035691 Bacteria 2954
143 Ga0373937_0102361 3300036401 Bacteria 2659
144 Ga0395905_0001298 3300037471 Bacteria 30735
145 Ga0395905_0001494 3300037471 Bacteria 28004
146 Ga0395905_0076167 3300037471 Bacteria 3144
147 Ga0436361_0254519 3300039447 Bacteria 16014
148 Ga0436361_0434534 3300039447 Bacteria 5048
149 Ga0436361_0437917 3300039447 Bacteria 7028
150 Ga0450911_000088 3300042115 Bacteria 36939
151 Ga0450918_000455 3300042531 Bacteria 8742
152 Ga0451577_0002002 3300042876 Bacteria 25362
153 Ga0451577_0003088 3300042876 Bacteria 18812
154 Ga0451577_0042207 3300042876 Bacteria 4091
155 Ga0451577_0100959 3300042876 Bacteria 2577
156 Ga0466969_0000066 3300044656 Bacteria 54572
157 Ga0453684_0023348 3300044712 Bacteria 9119
158 Ga0453684_0047359 3300044712 Bacteria 5703
159 Ga0451576_0025898 3300045051 Bacteria 6317
160 Ga0451576_0045935 3300045051 Bacteria 4599
161 Ga0451576_0057352 3300045051 Bacteria 4071
162 Ga0451576_0060828 3300045051 Bacteria 3939
163 Ga0495592_0000292 3300046454 Bacteria 42696
164 Ga0495650_0000097 3300046471 Bacteria 216051
165 Ga0495650_0004234 3300046471 Bacteria 9934
166 Ga0495606_0004627 3300046507 Bacteria 13615
167 Ga0495632_0025538 3300046519 Bacteria 3123
168 Ga0495649_0007520 3300046694 Bacteria 6628
169 Ga0495660_0034974 3300046810 Bacteria 2809
170 Ga0495687_000705 3300047443 Bacteria 37210
171 Ga0495687_006428 3300047443 Bacteria 7201
172 Ga0495687_008721 3300047443 Bacteria 5758
173 Ga0496102_0001369 3300048905 Bacteria 21760
174 Ga0496112_0037221 3300048915 Bacteria 4749
175 Ga0496121_0013731 3300048924 Bacteria 8677
176 Ga0496124_0000086 3300048927 Bacteria 202844
177 Ga0496124_0012724 3300048927 Bacteria 8274
178 Ga0496125_0004650 3300048928 Bacteria 15661
179 Ga0496125_0036266 3300048928 Bacteria 4309
180 Ga0501033_0001617 3300049570 Bacteria 19789
181 Ga0501040_0017836 3300049576 Bacteria 4712
182 Ga0501043_0000327 3300049579 Bacteria 42890
183 Ga0501046_0005043 3300049580 Bacteria 11843
184 Ga0501047_0000494 3300049581 Bacteria 42714
185 Ga0501072_0018096 3300049588 Bacteria 5419
186 Ga0501072_0031859 3300049588 Bacteria 4127
187 Ga0501221_000795 3300049704 Bacteria 5111
188 Ga0501079_0024736 3300049741 Bacteria 4608
189 Ga0501081_0001465 3300049743 Bacteria 14459
190 Ga0501045_0036616 3300049824 Bacteria 3564
191 nmdc:mga03683_3028_c1 3300050489 Bacteria 5326
192 nmdc:mga03683_4902_c1 3300050489 Bacteria 4473
193 nmdc:mga0yw44_12287_c1 3300050492 Bacteria 4457
194 nmdc:mga0k408_12651_c1 3300050493 Bacteria 4614
195 nmdc:mga0k408_1510_c1 3300050493 Bacteria 12592
196 nmdc:mga0k408_1701_c1 3300050493 Bacteria 11844
197 nmdc:mga0k408_549_c1 3300050493 Bacteria 20700
198 nmdc:mga0k408_7745_c1 3300050493 Bacteria 5742
199 nmdc:mga07m45_15610_c1 3300050496 Bacteria 4056
200 nmdc:mga07m45_2801_c1 3300050496 Bacteria 8247
201 nmdc:mga07m45_818_c1 3300050496 Bacteria 13438
202 Ga0500593_000679 3300053117 Bacteria 12922
203 Ga0500645_006503 3300053730 Bacteria 4158
204 Ga0501084_0002311 3300054114 Bacteria 15304
205 Ga0501082_0017792 3300060353 Bacteria 6123
206 Ga0530510_0000409 3300061734 Bacteria 27905

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300060353 Ga0501082_0017792 Ga0501082_0017792_4438_6108 528
2 3300046810 Ga0495660_0034974 Ga0495660_0034974_1007_2752 539
3 3300049588 Ga0501072_0031859 Ga0501072_0031859_2373_4097 546
4 3300050496 nmdc:mga07m45_15610_c1 nmdc:mga07m45_15610_c1_2078_4045 633
5 3300031711 Ga0265314_10004648 Ga0265314_100046485 640
6 3300003322 rootL2_10018686 rootL2_100186866 645
7 3300006195 Ga0075366_10003565 Ga0075366_100035654 647
8 3300049704 Ga0501221_000795 Ga0501221_000795_1763_3964 648
9 3300047443 Ga0495687_000705 Ga0495687_000705_24065_26296 653
10 3300031616 Ga0307508_10000909 Ga0307508_1000090916 654
11 3300033180 Ga0307510_10074527 Ga0307510_100745271 654
12 3300050493 nmdc:mga0k408_1510_c1 nmdc:mga0k408_1510_c1_5132_7327 656
13 3300031507 Ga0307509_10000930 Ga0307509_100009306 657
14 3300031730 Ga0307516_10040986 Ga0307516_100409862 657
15 3300049576 Ga0501040_0017836 Ga0501040_0017836_2024_4183 657
16 3300049741 Ga0501079_0024736 Ga0501079_0024736_2208_4367 657
17 3300049743 Ga0501081_0001465 Ga0501081_0001465_2713_4872 657
18 3300054114 Ga0501084_0002311 Ga0501084_0002311_5396_7555 657
19 3300061734 Ga0530510_0000409 Ga0530510_0000409_11127_13286 657
20 3300044656 Ga0466969_0000066 Ga0466969_0000066_38645_40858 658
21 3300013104 Ga0157370_10000470 Ga0157370_1000047026 659
22 3300025909 Ga0207705_10011517 Ga0207705_100115174 659
23 3300025949 Ga0207667_10001925 Ga0207667_1000192510 659
24 3300033180 Ga0307510_10002041 Ga0307510_1000204121 660
25 3300005841 Ga0068863_100025974 Ga0068863_1000259744 661
26 3300006048 Ga0075363_100004208 Ga0075363_1000042083 661
27 3300042876 Ga0451577_0003088 Ga0451577_0003088_14827_17301 661
28 3300050489 nmdc:mga03683_3028_c1 nmdc:mga03683_3028_c1_2996_5194 661
29 3300050492 nmdc:mga0yw44_12287_c1 nmdc:mga0yw44_12287_c1_1627_3825 661
30 3300050493 nmdc:mga0k408_1701_c1 nmdc:mga0k408_1701_c1_1815_4013 661
31 3300050496 nmdc:mga07m45_818_c1 nmdc:mga07m45_818_c1_1558_3756 661
32 3300014968 Ga0157379_10096695 Ga0157379_100966952 662
33 3300042876 Ga0451577_0100959 Ga0451577_0100959_317_2518 662
34 3300045051 Ga0451576_0045935 Ga0451576_0045935_631_2832 664
35 3300006195 Ga0075366_10008744 Ga0075366_100087444 665
36 3300032004 Ga0307414_10002937 Ga0307414_100029375 665
37 3300032005 Ga0307411_10000076 Ga0307411_100000763 665
38 3300042876 Ga0451577_0042207 Ga0451577_0042207_557_2782 667
39 3300048927 Ga0496124_0000086 Ga0496124_0000086_75402_77576 667
40 3300048928 Ga0496125_0004650 Ga0496125_0004650_2252_4426 667
41 3300046471 Ga0495650_0000097 Ga0495650_0000097_112979_115387 668
42 3300046694 Ga0495649_0007520 Ga0495649_0007520_866_3064 669
43 3300047443 Ga0495687_006428 Ga0495687_006428_32_2230 669
44 3300031548 Ga0307408_100000039 Ga0307408_100000039159 671
45 3300003775 Ga0055524_1007399 Ga0055524_10073994 672
46 3300025299 Ga0209256_1001133 Ga0209256_10011333 672
47 3300046519 Ga0495632_0025538 Ga0495632_0025538_752_2998 673
48 3300005577 Ga0068857_100011441 Ga0068857_1000114415 674
49 3300006048 Ga0075363_100017945 Ga0075363_1000179453 674
50 3300009093 Ga0105240_10043620 Ga0105240_100436205 674
51 3300026116 Ga0207674_10011853 Ga0207674_100118536 674
52 3300047443 Ga0495687_008721 Ga0495687_008721_1504_3702 675
53 3300003322 rootL2_10013604 rootL2_100136044 676
54 3300028786 Ga0307517_10000122 Ga0307517_1000012248 676
55 3300021361 Ga0213872_10002822 Ga0213872_1000282211 679
56 3300028794 Ga0307515_10001540 Ga0307515_1000154016 679
57 3300031507 Ga0307509_10021493 Ga0307509_100214934 680
58 3300031456 Ga0307513_10017454 Ga0307513_100174547 681
59 3300005467 Ga0070706_100005377 Ga0070706_1000053777 682
60 3300005468 Ga0070707_100032232 Ga0070707_1000322323 682
61 3300005471 Ga0070698_100070619 Ga0070698_1000706193 682
62 3300005564 Ga0070664_100005484 Ga0070664_1000054843 682
63 3300006178 Ga0075367_10004890 Ga0075367_100048903 682
64 3300025910 Ga0207684_10003714 Ga0207684_1000371410 682
65 3300046471 Ga0495650_0004234 Ga0495650_0004234_1886_4339 682
66 3300005367 Ga0070667_100001640 Ga0070667_10000164013 683
67 3300006195 Ga0075366_10003661 Ga0075366_100036614 683
68 3300025986 Ga0207658_10001138 Ga0207658_1000113814 683
69 3300050493 nmdc:mga0k408_549_c1 nmdc:mga0k408_549_c1_14721_16928 683
70 3300003794 Ga0055531_10000002 Ga0055531_10000002329 684
71 3300005459 Ga0068867_100012169 Ga0068867_1000121694 684
72 3300009177 Ga0105248_10019362 Ga0105248_100193628 684
73 3300025299 Ga0209256_1000457 Ga0209256_100045741 684
74 3300025304 Ga0209257_1000049 Ga0209257_1000049364 684
75 3300039447 Ga0436361_0437917 Ga0436361_0437917_1490_3916 684
76 3300048915 Ga0496112_0037221 Ga0496112_0037221_1423_3873 684
77 3300025907 Ga0207645_10014479 Ga0207645_100144793 686
78 3300026089 Ga0207648_10004957 Ga0207648_1000495711 686
79 3300045051 Ga0451576_0060828 Ga0451576_0060828_685_3180 686
80 3300005354 Ga0070675_100005047 Ga0070675_1000050479 689
81 3300025940 Ga0207691_10005253 Ga0207691_100052537 689
82 3300026121 Ga0207683_10008758 Ga0207683_100087583 689
83 3300042115 Ga0450911_000088 Ga0450911_000088_32312_34756 689
84 3300045051 Ga0451576_0025898 Ga0451576_0025898_2044_4470 689
85 3300045051 Ga0451576_0057352 Ga0451576_0057352_500_2929 689
86 3300048927 Ga0496124_0012724 Ga0496124_0012724_369_2813 689
87 3300048928 Ga0496125_0036266 Ga0496125_0036266_296_2740 689
88 3300042876 Ga0451577_0002002 Ga0451577_0002002_4922_7363 690
89 3300003794 Ga0055531_10005400 Ga0055531_100054003 691
90 3300025304 Ga0209257_1000065 Ga0209257_1000065313 691
91 3300028794 Ga0307515_10007089 Ga0307515_1000708915 692
92 3300046507 Ga0495606_0004627 Ga0495606_0004627_926_3133 692
93 3300048924 Ga0496121_0013731 Ga0496121_0013731_4361_6757 692
94 3300049570 Ga0501033_0001617 Ga0501033_0001617_10077_12266 692
95 3300049579 Ga0501043_0000327 Ga0501043_0000327_19791_22049 693
96 3300049580 Ga0501046_0005043 Ga0501046_0005043_946_3204 693
97 3300049581 Ga0501047_0000494 Ga0501047_0000494_19785_22043 693
98 3300049824 Ga0501045_0036616 Ga0501045_0036616_1100_3358 693
99 3300006195 Ga0075366_10013995 Ga0075366_100139951 694
100 3300014968 Ga0157379_10024802 Ga0157379_100248023 694
101 3300037471 Ga0395905_0076167 Ga0395905_0076167_881_3109 694
102 3300050493 nmdc:mga0k408_12651_c1 nmdc:mga0k408_12651_c1_21_2459 694
103 3300031239 Ga0265328_10010359 Ga0265328_100103591 695
104 3300031251 Ga0265327_10000058 Ga0265327_1000005883 695
105 3300031344 Ga0265316_10000580 Ga0265316_1000058029 695
106 3300005331 Ga0070670_100002700 Ga0070670_10000270010 696
107 3300005355 Ga0070671_100004938 Ga0070671_1000049385 696
108 3300005364 Ga0070673_100013456 Ga0070673_1000134561 696
109 3300005459 Ga0068867_100003315 Ga0068867_1000033154 696
110 3300017792 Ga0163161_10015311 Ga0163161_100153113 696
111 3300025321 Ga0207656_10009370 Ga0207656_100093702 696
112 3300025893 Ga0207682_10000730 Ga0207682_100007308 696
113 3300025923 Ga0207681_10002861 Ga0207681_100028615 696
114 3300025931 Ga0207644_10020443 Ga0207644_100204433 696
115 3300025960 Ga0207651_10007790 Ga0207651_100077903 696
116 3300026089 Ga0207648_10002589 Ga0207648_1000258914 696
117 3300028794 Ga0307515_10010522 Ga0307515_1001052211 696
118 3300050489 nmdc:mga03683_4902_c1 nmdc:mga03683_4902_c1_799_3015 696
119 3300039447 Ga0436361_0434534 Ga0436361_0434534_1194_3392 697
120 3300044712 Ga0453684_0047359 Ga0453684_0047359_3164_5494 697
121 iso_pu_bacteria 2919688452 2919691614 697
122 3300003794 Ga0055531_10003559 Ga0055531_100035593 698
123 3300025292 Ga0209676_1002835 Ga0209676_10028354 698
124 3300025294 Ga0209025_1000562 Ga0209025_100056218 698
125 3300025304 Ga0209257_1000529 Ga0209257_100052939 698
126 3300031649 Ga0307514_10001289 Ga0307514_1000128928 698
127 3300053730 Ga0500645_006503 Ga0500645_006503_99_2339 699
128 3300031238 Ga0265332_10000133 Ga0265332_1000013313 701
129 3300031456 Ga0307513_10022781 Ga0307513_100227818 701
130 3300037471 Ga0395905_0001298 Ga0395905_0001298_23663_26008 702
131 3300030522 Ga0307512_10048484 Ga0307512_100484844 703
132 3300031507 Ga0307509_10000168 Ga0307509_1000016829 703
133 3300033180 Ga0307510_10004457 Ga0307510_1000445710 703
134 3300032004 Ga0307414_10007762 Ga0307414_100077624 704
135 3300032126 Ga0307415_100020261 Ga0307415_1000202613 704
136 3300046454 Ga0495592_0000292 Ga0495592_0000292_17322_19538 704
137 3300031911 Ga0307412_10006575 Ga0307412_100065753 705
138 3300049588 Ga0501072_0018096 Ga0501072_0018096_725_2863 705
139 3300009093 Ga0105240_10009863 Ga0105240_1000986313 707
140 3300009545 Ga0105237_10001179 Ga0105237_1000117915 707
141 3300010375 Ga0105239_10000663 Ga0105239_1000066320 707
142 3300025913 Ga0207695_10054426 Ga0207695_100544262 707
143 3300025914 Ga0207671_10004838 Ga0207671_1000483812 707
144 3300031251 Ga0265327_10001075 Ga0265327_100010755 707
145 3300005330 Ga0070690_100000684 Ga0070690_10000068412 708
146 3300005335 Ga0070666_10000430 Ga0070666_1000043010 708
147 3300005338 Ga0068868_100000640 Ga0068868_10000064015 708
148 3300005354 Ga0070675_100000123 Ga0070675_10000012316 708
149 3300005355 Ga0070671_100007350 Ga0070671_1000073504 708
150 3300005365 Ga0070688_100026200 Ga0070688_1000262001 708
151 3300005367 Ga0070667_100001101 Ga0070667_10000110114 708
152 3300005456 Ga0070678_100000510 Ga0070678_1000005106 708
153 3300005457 Ga0070662_100005863 Ga0070662_1000058634 708
154 3300005459 Ga0068867_100006840 Ga0068867_1000068403 708
155 3300005543 Ga0070672_100036190 Ga0070672_1000361903 708
156 3300005617 Ga0068859_100004919 Ga0068859_1000049195 708
157 3300005618 Ga0068864_100000878 Ga0068864_1000008788 708
158 3300005841 Ga0068863_100000467 Ga0068863_10000046728 708
159 3300005842 Ga0068858_100001402 Ga0068858_10000140214 708
160 3300006931 Ga0097620_100004919 Ga0097620_1000049195 708
161 3300025903 Ga0207680_10000359 Ga0207680_1000035912 708
162 3300025926 Ga0207659_10001934 Ga0207659_100019345 708
163 3300025931 Ga0207644_10011192 Ga0207644_100111924 708
164 3300025933 Ga0207706_10009927 Ga0207706_100099276 708
165 3300025941 Ga0207711_10005885 Ga0207711_100058859 708
166 3300025986 Ga0207658_10004068 Ga0207658_100040688 708
167 3300026023 Ga0207677_10002422 Ga0207677_100024227 708
168 3300026035 Ga0207703_10001258 Ga0207703_1000125817 708
169 3300026088 Ga0207641_10006953 Ga0207641_100069536 708
170 3300026089 Ga0207648_10011736 Ga0207648_100117363 708
171 3300026095 Ga0207676_10000317 Ga0207676_1000031717 708
172 3300026121 Ga0207683_10001602 Ga0207683_100016027 708
173 iso_pu_bacteria 2738541337 2739053848 708
174 3300013296 Ga0157374_10005270 Ga0157374_100052707 711
175 3300014325 Ga0163163_10002044 Ga0163163_100020449 711
176 3300014968 Ga0157379_10001025 Ga0157379_100010254 711
177 iso_pu_bacteria 2643221639 2644220653 713
178 iso_pu_bacteria 2643221654 2644301590 713
179 iso_pu_bacteria 2643221646 2644259592 714
180 3300053117 Ga0500593_000679 Ga0500593_000679_6451_8610 715
181 3300003791 Ga0055530_10001110 Ga0055530_1000111011 716
182 3300003792 Ga0055540_1000004 Ga0055540_1000004274 716
183 3300025298 Ga0209050_1000966 Ga0209050_100096628 716
184 3300025303 Ga0209051_1000016 Ga0209051_1000016367 716
185 3300025304 Ga0209257_1000115 Ga0209257_100011576 716
186 3300035691 Ga0373931_0026430 Ga0373931_0026430_413_2803 716
187 3300005364 Ga0070673_100027061 Ga0070673_1000270614 718
188 iso_pu_bacteria 2643221544 2643743516 718
189 iso_pu_bacteria 2643221644 2644248623 718
190 iso_pu_bacteria 2998344455 2998347340 718
191 3300048905 Ga0496102_0001369 Ga0496102_0001369_2733_4979 719
192 iso_pu_bacteria 2928130867 2928135057 719
193 3300005616 Ga0068852_100038051 Ga0068852_1000380512 720
194 3300027614 Ga0209970_1000326 Ga0209970_10003263 721
195 iso_pu_bacteria 8003014200 8003014331 721
196 3300042531 Ga0450918_000455 Ga0450918_000455_2433_4826 722
197 iso_pu_bacteria 2643221660 2644339932 722
198 iso_pu_bacteria 2643221544 2643745221 723
199 3300006353 Ga0075370_10004962 Ga0075370_100049623 724
200 iso_pu_bacteria 2808606386 2808984407 724
201 iso_pu_bacteria 2808606415 2809130761 724
202 iso_pu_bacteria 2808606419 2809149761 724
203 iso_pu_bacteria 2852618963 2852620100 724
204 3300003759 Ga0055525_1000053 Ga0055525_1000053202 725
205 3300006195 Ga0075366_10011399 Ga0075366_100113994 725
206 3300006353 Ga0075370_10000288 Ga0075370_100002887 725
207 3300025230 Ga0209563_100014 Ga0209563_100014863 725
208 3300050493 nmdc:mga0k408_7745_c1 nmdc:mga0k408_7745_c1_2368_4656 725
209 3300050496 nmdc:mga07m45_2801_c1 nmdc:mga07m45_2801_c1_3406_5694 725
210 iso_pu_bacteria 2643221585 2643934780 725
211 iso_pu_bacteria 2643221656 2644316267 725
212 iso_pu_bacteria 2765235838 2765570268 725
213 iso_pu_bacteria 2839094727 2839096787 725
214 3300005459 Ga0068867_100000021 Ga0068867_10000002180 726
215 3300014745 Ga0157377_10000021 Ga0157377_1000002136 726
216 3300026089 Ga0207648_10000397 Ga0207648_1000039739 726
217 3300013296 Ga0157374_10051719 Ga0157374_100517193 727
218 3300015683 Ga0183362_10001 Ga0183362_10001442 727
219 3300036401 Ga0373937_0102361 Ga0373937_0102361_67_2526 727
220 3300037471 Ga0395905_0001494 Ga0395905_0001494_25456_27870 727
221 iso_pu_bacteria 2751185846 2753571357 727
222 iso_pu_bacteria 2791355137 2792840315 727
223 iso_pu_bacteria 2904615490 2904620352 727
224 3300039447 Ga0436361_0254519 Ga0436361_0254519_12115_14466 729
225 3300044712 Ga0453684_0023348 Ga0453684_0023348_4428_6914 729
226 3300028794 Ga0307515_10002116 Ga0307515_1000211634 736
227 3300031730 Ga0307516_10002516 Ga0307516_1000251621 736
228 2162886007 SwRhRL2b_contig_2832676 SwRhRL2b_0418.00002890 749
229 3300005289 Ga0065704_10073154 Ga0065704_100731549 749

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

294

474

0.99

PF00403

HMA

Heavy-metal-associated domain

21

81

0.96

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

490

711

0.93

PF00403

HMA

Heavy-metal-associated domain

88

148

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4a48-assembly1.cif.gz_A crosstalk between cu(i) and zn(ii) homeostasis 0.9808 14 81
3dxs-assembly1.cif.gz_X crystal structure of a copper binding domain from hma7, a p-type atpase 0.977 15 81
4a4j-assembly1.cif.gz_A crosstalk between cu(i) and zn(ii) homeostasis 0.9763 14 81
2xmw-assembly1.cif.gz_A pacs, n-terminal domain, from synechocystis pcc6803 0.9728 14 82
6ff2-assembly1.cif.gz_B copz metallochaperone 0.9678 14 79
ID Description Score Start End Superfamily
af_Q59385_102_164_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9889 18 79 3.30.70.100
af_A0A0N7KES2_46_116_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9869 13 79 3.30.70.100
af_Q557B5_1074_1224_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.985 563 693 3.40.50.1000
4a48A00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9808 14 81 3.30.70.100
af_Q5AG51_92_157_3.30.70.100 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.977 17 79 3.30.70.100
ID Description Score Start End GO Terms
AF-T1B4D4-F1-model_v4 Mercuric ion reductase 0.9792 14 80 GO:0003955
GO:0016668
GO:0046872
GO:0050660
AF-A0A432JR33-F1-model_v4 deleted 0.9788 244 327
AF-A0A6L6WBI7-F1-model_v4 HMA domain-containing protein 0.9714 13 81 GO:0046872
AF-A0A612W7X7-F1-model_v4 Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase) 0.9697 16 82 GO:0003955
GO:0016152
GO:0016668
GO:0046872
GO:0050660
AF-A0A7V9VH25-F1-model_v4 Heavy-metal-associated domain-containing protein 0.9627 14 79 GO:0005507
GO:0006825

Feature Viewer

pLDDT pTM Quality
78.39 0.67 Medium
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Predicted Structure (AlphaFold2)

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