F342069
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 229 | 153 | 213 | 329 |
Family's Representative Sequence
| Representative Sequence | 3300025263|Ga0209565_1012643|Ga0209565_10126432 |
| Length | 342 |
| Sequence | MLEHGGRLLRAAQRYGIPAAHWLDLSTGINPQAWPLPEIPARVWQRLPEDDDGLAQIAADYYGAPQALPVAGSQAAIQALPELRSRSRVGVLAPGYAEHAHAWRRAGHAVDTLAADELWAQHERFDVIVLIHPNNPGGERFERAELLALHESLSARGGWLLIDEAFMDATPEASLCGETAREGLIVLRSAGKFFGLAGARGGFVCAAPALLAALRERLGPWTLTGPARHVLRHALADRDWQRRMRAQLLAQGDRLAALLRAHGLAPSGGSAFFQWRRDPRAAYWHEALAQRAILTRLFDQPASLRFGLPGGEDEWRRLESALADVASIEAAPAQAETARPPR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221559 | Lysobacter sp. Root559 | Isolate | Unclassified |
| 2 | 2643221573 | Lysobacter sp. Root604 | Isolate | Unclassified |
| 3 | 2643221586 | Lysobacter sp. Root667 | Isolate | Unclassified |
| 4 | 2643221593 | Lysobacter sp. Root690 | Isolate | Unclassified |
| 5 | 2643221612 | Lysobacter sp. Root76 | Isolate | Unclassified |
| 6 | 2643221685 | Rhodanobacter sp. Root480 | Isolate | Unclassified |
| 7 | 2643221720 | Lysobacter sp. Root916 | Isolate | Unclassified |
| 8 | 2643221727 | Lysobacter sp. Root96 | Isolate | Unclassified |
| 9 | 2643221728 | Lysobacter sp. Root983 | Isolate | Unclassified |
| 10 | 2739367700 | Dyella sp. YR388 | Isolate | Unclassified |
| 11 | 2747842501 | Xanthomonas sp. WCS2014-23 | Isolate | Unclassified |
| 12 | 2843690924 | Chromobacterium rhizoryzae JP2-74 | Isolate | Rhizosphere |
| 13 | 2928963466 | Dyella japonica 1073 | Isolate | Unclassified |
| 14 | 2941471342 | Luteibacter sp. 621 | Isolate | Unclassified |
| 15 | 2941489479 | Lysobacter enzymogenes 2943 | Isolate | Rhizosphere |
| 16 | 2995948881 | Lysobacter enzymogenes B25 | Isolate | Unclassified |
| 17 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 18 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 19 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 20 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 21 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 22 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 23 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 24 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 25 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 26 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 27 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 28 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 29 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 30 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 31 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 32 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 33 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 34 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 35 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 36 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 37 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 38 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 39 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 40 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 41 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 42 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 43 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 44 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 45 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 46 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 47 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 48 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 49 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 50 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 51 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 52 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 53 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 54 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 55 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 56 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300012500 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 | Metagenome | Rhizosphere |
| 61 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300015685 | Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 | Metagenome | Unclassified |
| 65 | 3300015689 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 | Metagenome | Rhizosphere |
| 66 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 73 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 74 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 75 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 76 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 77 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 78 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 79 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 80 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 81 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 82 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 83 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 84 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 85 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 86 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 87 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 88 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 89 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 105 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 106 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 107 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 108 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 109 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 110 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 111 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 112 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 113 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 114 | 3300041407 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 | Metagenome | Rhizosphere |
| 115 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 116 | 3300042438 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 | Metagenome | Rhizosphere |
| 117 | 3300044672 | Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E | Metagenome | Unclassified |
| 118 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 119 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 120 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 121 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 122 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 123 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 124 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 125 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 126 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 127 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 128 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 135 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 136 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 137 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 138 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 139 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 140 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 141 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 142 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 143 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 144 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 145 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 146 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 147 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 148 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 149 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 151 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 152 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 153 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 92.14 |
| Metatranscriptomes | 0.87 |
| Isolates | 6.99 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 31.44 |
| Nodule | 0 |
| Rhizoplane | 3.93 |
| Rhizosphere | 44.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 20.09 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24737J22298_10019881 | 3300001990 | Bacteria | 2147 |
| 2 | JGI25156J39149_1001254 | 3300002705 | Bacteria | 11092 |
| 3 | JGI25162J39368_1005592 | 3300002737 | Bacteria | 2400 |
| 4 | JGI25157J39369_1001271 | 3300002741 | Bacteria | 10246 |
| 5 | JGI25164J39214_1000030 | 3300002772 | Bacteria | 145974 |
| 6 | JGI25152J39213_1000041 | 3300002773 | Bacteria | 88071 |
| 7 | JGI25150J39212_1000109 | 3300002774 | Bacteria | 47887 |
| 8 | JGI25151J46595_10000141 | 3300003187 | Bacteria | 95351 |
| 9 | JGI25151J46595_10000347 | 3300003187 | Bacteria | 49734 |
| 10 | JGI25165J46597_1000057 | 3300003214 | Bacteria | 217135 |
| 11 | JGI25153J46596_10000106 | 3300003215 | Bacteria | 95351 |
| 12 | rootH2_10032037 | 3300003320 | Bacteria | 25057 |
| 13 | rootL2_10028848 | 3300003322 | Bacteria | 1800 |
| 14 | rootH1_10225123 | 3300003323 | Bacteria | 2773 |
| 15 | Ga0006562J51391_1038928 | 3300003578 | Bacteria | 20190 |
| 16 | Ga0006562J51391_1038931 | 3300003578 | Bacteria | 6740 |
| 17 | Ga0055539_1007600 | 3300003752 | Bacteria | 1369 |
| 18 | Ga0055533_1001987 | 3300003756 | Bacteria | 4985 |
| 19 | Ga0055533_1004413 | 3300003756 | Bacteria | 2531 |
| 20 | Ga0055525_1000093 | 3300003759 | Bacteria | 138423 |
| 21 | Ga0055527_1000245 | 3300003760 | Bacteria | 33608 |
| 22 | Ga0055535_1000732 | 3300003761 | Bacteria | 24695 |
| 23 | Ga0055535_1000901 | 3300003761 | Bacteria | 20311 |
| 24 | Ga0055542_1000544 | 3300003762 | Bacteria | 33466 |
| 25 | Ga0055542_1000751 | 3300003762 | Bacteria | 24695 |
| 26 | Ga0055542_1000753 | 3300003762 | Bacteria | 24623 |
| 27 | Ga0055542_1001155 | 3300003762 | Bacteria | 15422 |
| 28 | Ga0055529_1000588 | 3300003763 | Bacteria | 28906 |
| 29 | Ga0055529_1000941 | 3300003763 | Bacteria | 15422 |
| 30 | Ga0055526_1001839 | 3300003771 | Bacteria | 14677 |
| 31 | Ga0055537_1000858 | 3300003773 | Bacteria | 14770 |
| 32 | Ga0055524_1001278 | 3300003775 | Bacteria | 14770 |
| 33 | Ga0055536_1001438 | 3300003781 | Bacteria | 14357 |
| 34 | Ga0055534_1000786 | 3300003784 | Bacteria | 14770 |
| 35 | Ga0055528_1000752 | 3300003790 | Bacteria | 22606 |
| 36 | Ga0055531_10006980 | 3300003794 | Bacteria | 6276 |
| 37 | Ga0070689_100041614 | 3300005340 | Bacteria | 3527 |
| 38 | Ga0070667_100000133 | 3300005367 | Bacteria | 94771 |
| 39 | Ga0070663_100000263 | 3300005455 | Bacteria | 26391 |
| 40 | Ga0070663_100015892 | 3300005455 | Bacteria | 4872 |
| 41 | Ga0068853_100000138 | 3300005539 | Bacteria | 49814 |
| 42 | Ga0068853_100000391 | 3300005539 | Bacteria | 29990 |
| 43 | Ga0070665_100017248 | 3300005548 | Bacteria | 7246 |
| 44 | Ga0068855_100005293 | 3300005563 | Bacteria | 15755 |
| 45 | Ga0068855_100010686 | 3300005563 | Bacteria | 11078 |
| 46 | Ga0068855_100026584 | 3300005563 | Bacteria | 6924 |
| 47 | Ga0068857_100002273 | 3300005577 | Bacteria | 15618 |
| 48 | Ga0068857_100088814 | 3300005577 | Bacteria | 2765 |
| 49 | Ga0068854_100002661 | 3300005578 | Bacteria | 11078 |
| 50 | Ga0068854_100006581 | 3300005578 | Bacteria | 7401 |
| 51 | Ga0068851_10000797 | 3300005834 | Bacteria | 13612 |
| 52 | Ga0068863_100011978 | 3300005841 | Bacteria | 8381 |
| 53 | Ga0068860_100029071 | 3300005843 | Bacteria | 5316 |
| 54 | Ga0105240_10000503 | 3300009093 | Bacteria | 72122 |
| 55 | Ga0105240_10004902 | 3300009093 | Bacteria | 20148 |
| 56 | Ga0105240_10013768 | 3300009093 | Bacteria | 11083 |
| 57 | Ga0105237_10000084 | 3300009545 | Bacteria | 125742 |
| 58 | Ga0105237_10005674 | 3300009545 | Bacteria | 14044 |
| 59 | Ga0105237_10046062 | 3300009545 | Bacteria | 4387 |
| 60 | Ga0105237_10302676 | 3300009545 | Bacteria | 1602 |
| 61 | Ga0105249_10000158 | 3300009553 | Bacteria | 82194 |
| 62 | Ga0105249_10104315 | 3300009553 | Bacteria | 2671 |
| 63 | Ga0105239_10000174 | 3300010375 | Bacteria | 92922 |
| 64 | Ga0105239_10001238 | 3300010375 | Bacteria | 34762 |
| 65 | Ga0157314_1000856 | 3300012500 | Bacteria | 2537 |
| 66 | Ga0157370_10020306 | 3300013104 | Bacteria | 6635 |
| 67 | Ga0157369_10002645 | 3300013105 | Bacteria | 21374 |
| 68 | Ga0157369_10029124 | 3300013105 | Bacteria | 6104 |
| 69 | Ga0157369_10119717 | 3300013105 | Bacteria | 2794 |
| 70 | Ga0157369_10340969 | 3300013105 | Bacteria | 1557 |
| 71 | Ga0157376_10158907 | 3300014969 | Bacteria | 2046 |
| 72 | Ga0157376_10268843 | 3300014969 | Bacteria | 1600 |
| 73 | Ga0183369_1013 | 3300015685 | Bacteria | 222738 |
| 74 | Ga0183360_10001 | 3300015689 | Bacteria | 3943671 |
| 75 | Ga0209674_100012 | 3300025226 | Bacteria | 950162 |
| 76 | Ga0209674_100453 | 3300025226 | Bacteria | 18742 |
| 77 | Ga0209674_107455 | 3300025226 | Bacteria | 1382 |
| 78 | Ga0209672_100005 | 3300025228 | Bacteria | 1069303 |
| 79 | Ga0209672_100124 | 3300025228 | Bacteria | 80646 |
| 80 | Ga0209672_100621 | 3300025228 | Bacteria | 18434 |
| 81 | Ga0209672_101062 | 3300025228 | Bacteria | 11761 |
| 82 | Ga0209563_100045 | 3300025230 | Bacteria | 377102 |
| 83 | Ga0207427_100053 | 3300025231 | Bacteria | 217191 |
| 84 | Ga0209437_100108 | 3300025233 | Bacteria | 217191 |
| 85 | Ga0209437_100340 | 3300025233 | Bacteria | 56228 |
| 86 | Ga0209258_100006 | 3300025242 | Bacteria | 1069303 |
| 87 | Ga0209258_100055 | 3300025242 | Bacteria | 337291 |
| 88 | Ga0209258_100255 | 3300025242 | Bacteria | 94924 |
| 89 | Ga0209258_100892 | 3300025242 | Bacteria | 15492 |
| 90 | Ga0207425_1000084 | 3300025245 | Bacteria | 95660 |
| 91 | Ga0209026_1000172 | 3300025250 | Bacteria | 98917 |
| 92 | Ga0209026_1002761 | 3300025250 | Bacteria | 6275 |
| 93 | Ga0209026_1004629 | 3300025250 | Bacteria | 4005 |
| 94 | Ga0209677_100363 | 3300025253 | Bacteria | 27818 |
| 95 | Ga0209148_1000002 | 3300025254 | Bacteria | 2399500 |
| 96 | Ga0209148_1000012 | 3300025254 | Bacteria | 1069303 |
| 97 | Ga0209148_1000058 | 3300025254 | Bacteria | 357482 |
| 98 | Ga0209148_1000221 | 3300025254 | Bacteria | 94627 |
| 99 | Ga0209759_1000856 | 3300025256 | Bacteria | 23650 |
| 100 | Ga0209759_1002469 | 3300025256 | Bacteria | 8098 |
| 101 | Ga0209129_1000057 | 3300025258 | Bacteria | 253632 |
| 102 | Ga0209129_1003050 | 3300025258 | Bacteria | 7582 |
| 103 | Ga0209233_1000125 | 3300025261 | Bacteria | 217190 |
| 104 | Ga0209233_1004941 | 3300025261 | Bacteria | 4484 |
| 105 | Ga0209565_1000001 | 3300025263 | Bacteria | 2950419 |
| 106 | Ga0209565_1012643 | 3300025263 | Bacteria | 2006 |
| 107 | Ga0209455_1000008 | 3300025272 | Bacteria | 1069303 |
| 108 | Ga0209455_1000018 | 3300025272 | Bacteria | 718034 |
| 109 | Ga0209673_1000001 | 3300025273 | Bacteria | 3176258 |
| 110 | Ga0209675_1000001 | 3300025291 | Bacteria | 2950293 |
| 111 | Ga0209676_1000549 | 3300025292 | Bacteria | 57408 |
| 112 | Ga0209676_1002213 | 3300025292 | Bacteria | 14504 |
| 113 | Ga0209025_1000006 | 3300025294 | Bacteria | 1153444 |
| 114 | Ga0209025_1000013 | 3300025294 | Bacteria | 871757 |
| 115 | Ga0209564_1000001 | 3300025295 | Bacteria | 3176258 |
| 116 | Ga0209758_1000014 | 3300025297 | Bacteria | 871757 |
| 117 | Ga0209758_1000862 | 3300025297 | Bacteria | 41975 |
| 118 | Ga0209758_1015504 | 3300025297 | Bacteria | 3938 |
| 119 | Ga0209758_1042553 | 3300025297 | Bacteria | 1683 |
| 120 | Ga0209256_1000006 | 3300025299 | Bacteria | 1250310 |
| 121 | Ga0209256_1001615 | 3300025299 | Bacteria | 22001 |
| 122 | Ga0209257_1000398 | 3300025304 | Bacteria | 85573 |
| 123 | Ga0209257_1001315 | 3300025304 | Bacteria | 30236 |
| 124 | Ga0207656_10013166 | 3300025321 | Bacteria | 3156 |
| 125 | Ga0207647_10000005 | 3300025904 | Bacteria | 223490 |
| 126 | Ga0207647_10052107 | 3300025904 | Bacteria | 2527 |
| 127 | Ga0207695_10000032 | 3300025913 | Bacteria | 521283 |
| 128 | Ga0207695_10000683 | 3300025913 | Bacteria | 66533 |
| 129 | Ga0207695_10000897 | 3300025913 | Bacteria | 53743 |
| 130 | Ga0207695_10054271 | 3300025913 | Bacteria | 4186 |
| 131 | Ga0207671_10000011 | 3300025914 | Bacteria | 530349 |
| 132 | Ga0207671_10009734 | 3300025914 | Bacteria | 7999 |
| 133 | Ga0207670_10027984 | 3300025936 | Bacteria | 3572 |
| 134 | Ga0207667_10000578 | 3300025949 | Bacteria | 47763 |
| 135 | Ga0207667_10001421 | 3300025949 | Bacteria | 29981 |
| 136 | Ga0207667_10002200 | 3300025949 | Bacteria | 24456 |
| 137 | Ga0207712_10000246 | 3300025961 | Bacteria | 52868 |
| 138 | Ga0207640_10000091 | 3300025981 | Bacteria | 71621 |
| 139 | Ga0207640_10002486 | 3300025981 | Bacteria | 9873 |
| 140 | Ga0207658_10000174 | 3300025986 | Bacteria | 69513 |
| 141 | Ga0207639_10003049 | 3300026041 | Bacteria | 11283 |
| 142 | Ga0207678_10001727 | 3300026067 | Bacteria | 20011 |
| 143 | Ga0207678_10037614 | 3300026067 | Bacteria | 4208 |
| 144 | Ga0207641_10086370 | 3300026088 | Bacteria | 2735 |
| 145 | Ga0207674_10000217 | 3300026116 | Bacteria | 71594 |
| 146 | Ga0207698_10132421 | 3300026142 | Bacteria | 2133 |
| 147 | Ga0268266_10224876 | 3300028379 | Bacteria | 1726 |
| 148 | Ga0307408_100024906 | 3300031548 | Bacteria | 4092 |
| 149 | Ga0307406_10003928 | 3300031901 | Bacteria | 8076 |
| 150 | Ga0307406_10023952 | 3300031901 | Bacteria | 3640 |
| 151 | Ga0307411_10337946 | 3300032005 | Bacteria | 1223 |
| 152 | Ga0395899_0031881 | 3300037312 | Bacteria | 3960 |
| 153 | Ga0395900_0000024 | 3300037418 | Bacteria | 323480 |
| 154 | Ga0395898_0000311 | 3300037466 | Bacteria | 112412 |
| 155 | Ga0395901_0137702 | 3300038443 | Bacteria | 2566 |
| 156 | Ga0400484_42610 | 3300038725 | Bacteria | 17301 |
| 157 | Ga0439436_0001409 | 3300041404 | Bacteria | 6951 |
| 158 | Ga0439439_0002479 | 3300041406 | Bacteria | 3933 |
| 159 | Ga0439447_000300 | 3300041407 | Bacteria | 17586 |
| 160 | Ga0439449_0030892 | 3300042007 | Bacteria | 1997 |
| 161 | Ga0439459_0004883 | 3300042438 | Bacteria | 2178 |
| 162 | Ga0466982_0000018 | 3300044672 | Bacteria | 113912 |
| 163 | Ga0466965_0012428 | 3300044683 | Bacteria | 4004 |
| 164 | Ga0466966_0017064 | 3300044684 | Bacteria | 4801 |
| 165 | Ga0466966_0065851 | 3300044684 | Bacteria | 2277 |
| 166 | Ga0466961_0000688 | 3300044693 | Bacteria | 21353 |
| 167 | Ga0466961_0004138 | 3300044693 | Bacteria | 9059 |
| 168 | Ga0466963_0046704 | 3300044694 | Bacteria | 2856 |
| 169 | Ga0466971_0003730 | 3300044719 | Bacteria | 6519 |
| 170 | Ga0466968_0016201 | 3300044735 | Bacteria | 2965 |
| 171 | Ga0466957_0015127 | 3300044842 | Bacteria | 4503 |
| 172 | Ga0466960_0095071 | 3300044901 | Bacteria | 1525 |
| 173 | Ga0466959_0024073 | 3300045049 | Bacteria | 4508 |
| 174 | Ga0466959_0032974 | 3300045049 | Bacteria | 3832 |
| 175 | Ga0466958_0173626 | 3300045836 | Bacteria | 1365 |
| 176 | Ga0495638_0000019 | 3300046460 | Bacteria | 384671 |
| 177 | Ga0495638_0000082 | 3300046460 | Bacteria | 153986 |
| 178 | Ga0495606_0000113 | 3300046507 | Bacteria | 136805 |
| 179 | Ga0495597_0075230 | 3300046542 | Bacteria | 1450 |
| 180 | Ga0495622_0063989 | 3300046557 | Bacteria | 1701 |
| 181 | Ga0495668_0000885 | 3300046616 | Bacteria | 33744 |
| 182 | Ga0495625_0017782 | 3300046660 | Bacteria | 5558 |
| 183 | Ga0496100_0068354 | 3300048903 | Bacteria | 2362 |
| 184 | Ga0496104_0065585 | 3300048907 | Bacteria | 3446 |
| 185 | Ga0496105_0010444 | 3300048908 | Bacteria | 7299 |
| 186 | Ga0496107_0073143 | 3300048910 | Bacteria | 2493 |
| 187 | Ga0496112_0131491 | 3300048915 | Bacteria | 2474 |
| 188 | Ga0496115_0000247 | 3300048918 | Bacteria | 48853 |
| 189 | Ga0496115_0000642 | 3300048918 | Bacteria | 26294 |
| 190 | Ga0496115_0045343 | 3300048918 | Bacteria | 3509 |
| 191 | Ga0496115_0082882 | 3300048918 | Bacteria | 2613 |
| 192 | Ga0496117_0030457 | 3300048920 | Bacteria | 4141 |
| 193 | Ga0496118_0001308 | 3300048921 | Bacteria | 37895 |
| 194 | Ga0496118_0002040 | 3300048921 | Bacteria | 28541 |
| 195 | Ga0496119_0000306 | 3300048922 | Bacteria | 68399 |
| 196 | Ga0496119_0010142 | 3300048922 | Bacteria | 7958 |
| 197 | Ga0496120_0000145 | 3300048923 | Bacteria | 119265 |
| 198 | Ga0496120_0001207 | 3300048923 | Bacteria | 32733 |
| 199 | Ga0496121_0000449 | 3300048924 | Bacteria | 81130 |
| 200 | Ga0496121_0003982 | 3300048924 | Bacteria | 20375 |
| 201 | Ga0496121_0014883 | 3300048924 | Bacteria | 8203 |
| 202 | Ga0496121_0024343 | 3300048924 | Bacteria | 5793 |
| 203 | Ga0496122_0047706 | 3300048925 | Bacteria | 3304 |
| 204 | Ga0496123_0046809 | 3300048926 | Bacteria | 2929 |
| 205 | Ga0496125_0000239 | 3300048928 | Bacteria | 112926 |
| 206 | Ga0496125_0011924 | 3300048928 | Bacteria | 8660 |
| 207 | Ga0496126_0003204 | 3300048929 | Bacteria | 20984 |
| 208 | Ga0496126_0028513 | 3300048929 | Bacteria | 5318 |
| 209 | Ga0495678_021422 | 3300049459 | Bacteria | 2847 |
| 210 | Ga0501033_0000172 | 3300049570 | Bacteria | 61466 |
| 211 | Ga0501043_0005415 | 3300049579 | Bacteria | 10315 |
| 212 | Ga0501035_0170233 | 3300049822 | Bacteria | 1882 |
| 213 | Ga0466962_0026275 | 3300061719 | Bacteria | 2795 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300038443 | Ga0395901_0137702 | Ga0395901_0137702_1678_2556 | 292 |
| 2 | 3300044684 | Ga0466966_0065851 | Ga0466966_0065851_379_1362 | 305 |
| 3 | 3300002773 | JGI25152J39213_1000041 | JGI25152J39213_100004165 | 315 |
| 4 | 3300002774 | JGI25150J39212_1000109 | JGI25150J39212_100010925 | 315 |
| 5 | 3300003187 | JGI25151J46595_10000141 | JGI25151J46595_1000014118 | 315 |
| 6 | 3300003215 | JGI25153J46596_10000106 | JGI25153J46596_1000010618 | 315 |
| 7 | 3300025245 | Ga0207425_1000084 | Ga0207425_100008469 | 315 |
| 8 | 3300025258 | Ga0209129_1000057 | Ga0209129_1000057199 | 315 |
| 9 | 3300025294 | Ga0209025_1000013 | Ga0209025_1000013266 | 315 |
| 10 | 3300025297 | Ga0209758_1000014 | Ga0209758_1000014266 | 315 |
| 11 | iso_pu_bacteria | 2941471342 | 2941474972 | 320 |
| 12 | 3300014969 | Ga0157376_10268843 | Ga0157376_102688432 | 323 |
| 13 | iso_pu_bacteria | 2643221685 | 2644477834 | 323 |
| 14 | iso_pu_bacteria | 2747842501 | 2748016732 | 323 |
| 15 | iso_pu_bacteria | 2843690924 | 2843693166 | 323 |
| 16 | iso_pu_bacteria | 2995948881 | 2995949993 | 323 |
| 17 | 3300013104 | Ga0157370_10020306 | Ga0157370_100203063 | 324 |
| 18 | 3300013105 | Ga0157369_10002645 | Ga0157369_1000264513 | 324 |
| 19 | 3300025904 | Ga0207647_10000005 | Ga0207647_1000000547 | 324 |
| 20 | 3300044694 | Ga0466963_0046704 | Ga0466963_0046704_657_1631 | 324 |
| 21 | 3300048921 | Ga0496118_0002040 | Ga0496118_0002040_23038_24018 | 324 |
| 22 | 3300048924 | Ga0496121_0000449 | Ga0496121_0000449_57092_58072 | 324 |
| 23 | 3300048925 | Ga0496122_0047706 | Ga0496122_0047706_398_1378 | 324 |
| 24 | 3300048926 | Ga0496123_0046809 | Ga0496123_0046809_428_1408 | 324 |
| 25 | 3300048928 | Ga0496125_0011924 | Ga0496125_0011924_990_1970 | 324 |
| 26 | 3300003322 | rootL2_10028848 | rootL2_100288481 | 325 |
| 27 | 3300003320 | rootH2_10032037 | rootH2_1003203711 | 326 |
| 28 | 3300003323 | rootH1_10225123 | rootH1_102251233 | 326 |
| 29 | 3300003781 | Ga0055536_1001438 | Ga0055536_10014389 | 326 |
| 30 | 3300009093 | Ga0105240_10000503 | Ga0105240_1000050356 | 326 |
| 31 | 3300010375 | Ga0105239_10001238 | Ga0105239_1000123829 | 326 |
| 32 | 3300025292 | Ga0209676_1000549 | Ga0209676_100054922 | 326 |
| 33 | 3300025913 | Ga0207695_10000032 | Ga0207695_10000032449 | 326 |
| 34 | 3300038725 | Ga0400484_42610 | Ga0400484_42610_8569_9552 | 326 |
| 35 | 3300002705 | JGI25156J39149_1001254 | JGI25156J39149_10012544 | 327 |
| 36 | 3300002737 | JGI25162J39368_1005592 | JGI25162J39368_10055922 | 327 |
| 37 | 3300002741 | JGI25157J39369_1001271 | JGI25157J39369_10012716 | 327 |
| 38 | 3300002772 | JGI25164J39214_1000030 | JGI25164J39214_100003047 | 327 |
| 39 | 3300003214 | JGI25165J46597_1000057 | JGI25165J46597_100005779 | 327 |
| 40 | 3300003752 | Ga0055539_1007600 | Ga0055539_10076001 | 327 |
| 41 | 3300003756 | Ga0055533_1001987 | Ga0055533_10019873 | 327 |
| 42 | 3300003759 | Ga0055525_1000093 | Ga0055525_100009315 | 327 |
| 43 | 3300003760 | Ga0055527_1000245 | Ga0055527_100024514 | 327 |
| 44 | 3300003761 | Ga0055535_1000732 | Ga0055535_100073214 | 327 |
| 45 | 3300003761 | Ga0055535_1000901 | Ga0055535_10009014 | 327 |
| 46 | 3300003762 | Ga0055542_1000544 | Ga0055542_100054421 | 327 |
| 47 | 3300003762 | Ga0055542_1000751 | Ga0055542_10007519 | 327 |
| 48 | 3300003762 | Ga0055542_1001155 | Ga0055542_10011559 | 327 |
| 49 | 3300003763 | Ga0055529_1000588 | Ga0055529_100058814 | 327 |
| 50 | 3300003763 | Ga0055529_1000941 | Ga0055529_10009418 | 327 |
| 51 | 3300003771 | Ga0055526_1001839 | Ga0055526_10018398 | 327 |
| 52 | 3300003773 | Ga0055537_1000858 | Ga0055537_10008588 | 327 |
| 53 | 3300003775 | Ga0055524_1001278 | Ga0055524_10012788 | 327 |
| 54 | 3300003784 | Ga0055534_1000786 | Ga0055534_10007868 | 327 |
| 55 | 3300003790 | Ga0055528_1000752 | Ga0055528_100075213 | 327 |
| 56 | 3300003794 | Ga0055531_10006980 | Ga0055531_100069805 | 327 |
| 57 | 3300005455 | Ga0070663_100015892 | Ga0070663_1000158925 | 327 |
| 58 | 3300005539 | Ga0068853_100000138 | Ga0068853_10000013837 | 327 |
| 59 | 3300005548 | Ga0070665_100017248 | Ga0070665_1000172489 | 327 |
| 60 | 3300005563 | Ga0068855_100005293 | Ga0068855_10000529314 | 327 |
| 61 | 3300005577 | Ga0068857_100088814 | Ga0068857_1000888143 | 327 |
| 62 | 3300005841 | Ga0068863_100011978 | Ga0068863_1000119786 | 327 |
| 63 | 3300009545 | Ga0105237_10046062 | Ga0105237_100460622 | 327 |
| 64 | 3300009545 | Ga0105237_10302676 | Ga0105237_103026761 | 327 |
| 65 | 3300009553 | Ga0105249_10104315 | Ga0105249_101043152 | 327 |
| 66 | 3300010375 | Ga0105239_10000174 | Ga0105239_1000017432 | 327 |
| 67 | 3300015689 | Ga0183360_10001 | Ga0183360_100013037 | 327 |
| 68 | 3300025226 | Ga0209674_100453 | Ga0209674_1004532 | 327 |
| 69 | 3300025226 | Ga0209674_107455 | Ga0209674_1074552 | 327 |
| 70 | 3300025228 | Ga0209672_100005 | Ga0209672_100005196 | 327 |
| 71 | 3300025228 | Ga0209672_100124 | Ga0209672_10012415 | 327 |
| 72 | 3300025228 | Ga0209672_101062 | Ga0209672_1010625 | 327 |
| 73 | 3300025230 | Ga0209563_100045 | Ga0209563_100045112 | 327 |
| 74 | 3300025231 | Ga0207427_100053 | Ga0207427_100053106 | 327 |
| 75 | 3300025233 | Ga0209437_100108 | Ga0209437_10010877 | 327 |
| 76 | 3300025242 | Ga0209258_100006 | Ga0209258_100006196 | 327 |
| 77 | 3300025242 | Ga0209258_100055 | Ga0209258_10005559 | 327 |
| 78 | 3300025242 | Ga0209258_100255 | Ga0209258_10025557 | 327 |
| 79 | 3300025250 | Ga0209026_1000172 | Ga0209026_100017215 | 327 |
| 80 | 3300025250 | Ga0209026_1004629 | Ga0209026_10046293 | 327 |
| 81 | 3300025253 | Ga0209677_100363 | Ga0209677_1003636 | 327 |
| 82 | 3300025254 | Ga0209148_1000012 | Ga0209148_1000012196 | 327 |
| 83 | 3300025254 | Ga0209148_1000058 | Ga0209148_1000058212 | 327 |
| 84 | 3300025254 | Ga0209148_1000221 | Ga0209148_100022157 | 327 |
| 85 | 3300025256 | Ga0209759_1000856 | Ga0209759_100085615 | 327 |
| 86 | 3300025261 | Ga0209233_1000125 | Ga0209233_1000125106 | 327 |
| 87 | 3300025263 | Ga0209565_1000001 | Ga0209565_1000001819 | 327 |
| 88 | 3300025272 | Ga0209455_1000008 | Ga0209455_1000008196 | 327 |
| 89 | 3300025272 | Ga0209455_1000018 | Ga0209455_1000018212 | 327 |
| 90 | 3300025273 | Ga0209673_1000001 | Ga0209673_1000001819 | 327 |
| 91 | 3300025291 | Ga0209675_1000001 | Ga0209675_10000011714 | 327 |
| 92 | 3300025292 | Ga0209676_1002213 | Ga0209676_10022137 | 327 |
| 93 | 3300025295 | Ga0209564_1000001 | Ga0209564_10000011876 | 327 |
| 94 | 3300025299 | Ga0209256_1000006 | Ga0209256_1000006312 | 327 |
| 95 | 3300025299 | Ga0209256_1001615 | Ga0209256_10016159 | 327 |
| 96 | 3300025304 | Ga0209257_1000398 | Ga0209257_100039865 | 327 |
| 97 | 3300025304 | Ga0209257_1001315 | Ga0209257_100131512 | 327 |
| 98 | 3300025913 | Ga0207695_10000897 | Ga0207695_1000089720 | 327 |
| 99 | 3300025913 | Ga0207695_10054271 | Ga0207695_100542714 | 327 |
| 100 | 3300025949 | Ga0207667_10002200 | Ga0207667_100022002 | 327 |
| 101 | 3300026067 | Ga0207678_10037614 | Ga0207678_100376144 | 327 |
| 102 | 3300026088 | Ga0207641_10086370 | Ga0207641_100863702 | 327 |
| 103 | 3300028379 | Ga0268266_10224876 | Ga0268266_102248762 | 327 |
| 104 | 3300037312 | Ga0395899_0031881 | Ga0395899_0031881_992_1975 | 327 |
| 105 | 3300037418 | Ga0395900_0000024 | Ga0395900_0000024_266656_267639 | 327 |
| 106 | 3300037466 | Ga0395898_0000311 | Ga0395898_0000311_41706_42689 | 327 |
| 107 | 3300042007 | Ga0439449_0030892 | Ga0439449_0030892_160_1143 | 327 |
| 108 | 3300042438 | Ga0439459_0004883 | Ga0439459_0004883_106_1089 | 327 |
| 109 | 3300044683 | Ga0466965_0012428 | Ga0466965_0012428_2882_3865 | 327 |
| 110 | 3300044684 | Ga0466966_0017064 | Ga0466966_0017064_3164_4147 | 327 |
| 111 | 3300044693 | Ga0466961_0000688 | Ga0466961_0000688_3705_4688 | 327 |
| 112 | 3300044693 | Ga0466961_0004138 | Ga0466961_0004138_4487_5470 | 327 |
| 113 | 3300044719 | Ga0466971_0003730 | Ga0466971_0003730_5234_6217 | 327 |
| 114 | 3300044842 | Ga0466957_0015127 | Ga0466957_0015127_584_1567 | 327 |
| 115 | 3300045049 | Ga0466959_0024073 | Ga0466959_0024073_539_1522 | 327 |
| 116 | 3300045049 | Ga0466959_0032974 | Ga0466959_0032974_903_1886 | 327 |
| 117 | 3300045836 | Ga0466958_0173626 | Ga0466958_0173626_127_1110 | 327 |
| 118 | 3300046460 | Ga0495638_0000019 | Ga0495638_0000019_257513_258496 | 327 |
| 119 | 3300048903 | Ga0496100_0068354 | Ga0496100_0068354_1167_2150 | 327 |
| 120 | 3300048908 | Ga0496105_0010444 | Ga0496105_0010444_5423_6406 | 327 |
| 121 | 3300048910 | Ga0496107_0073143 | Ga0496107_0073143_985_1968 | 327 |
| 122 | 3300048918 | Ga0496115_0045343 | Ga0496115_0045343_46_1029 | 327 |
| 123 | 3300048920 | Ga0496117_0030457 | Ga0496117_0030457_1455_2438 | 327 |
| 124 | 3300048921 | Ga0496118_0001308 | Ga0496118_0001308_17945_18928 | 327 |
| 125 | 3300048922 | Ga0496119_0000306 | Ga0496119_0000306_38797_39780 | 327 |
| 126 | 3300048922 | Ga0496119_0010142 | Ga0496119_0010142_72_1055 | 327 |
| 127 | 3300048923 | Ga0496120_0000145 | Ga0496120_0000145_88929_89912 | 327 |
| 128 | 3300048923 | Ga0496120_0001207 | Ga0496120_0001207_22386_23369 | 327 |
| 129 | 3300048924 | Ga0496121_0014883 | Ga0496121_0014883_874_1857 | 327 |
| 130 | 3300048929 | Ga0496126_0003204 | Ga0496126_0003204_16456_17439 | 327 |
| 131 | 3300048929 | Ga0496126_0028513 | Ga0496126_0028513_3327_4310 | 327 |
| 132 | 3300049579 | Ga0501043_0005415 | Ga0501043_0005415_8043_9038 | 327 |
| 133 | 3300061719 | Ga0466962_0026275 | Ga0466962_0026275_1242_2225 | 327 |
| 134 | 3300005367 | Ga0070667_100000133 | Ga0070667_10000013341 | 328 |
| 135 | 3300005455 | Ga0070663_100000263 | Ga0070663_10000026311 | 328 |
| 136 | 3300005539 | Ga0068853_100000391 | Ga0068853_10000039110 | 328 |
| 137 | 3300009545 | Ga0105237_10005674 | Ga0105237_1000567410 | 328 |
| 138 | 3300009553 | Ga0105249_10000158 | Ga0105249_1000015867 | 328 |
| 139 | 3300025914 | Ga0207671_10009734 | Ga0207671_1000973410 | 328 |
| 140 | 3300025961 | Ga0207712_10000246 | Ga0207712_1000024641 | 328 |
| 141 | 3300025986 | Ga0207658_10000174 | Ga0207658_1000017434 | 328 |
| 142 | 3300026041 | Ga0207639_10003049 | Ga0207639_100030498 | 328 |
| 143 | 3300026067 | Ga0207678_10001727 | Ga0207678_100017277 | 328 |
| 144 | iso_pu_bacteria | 2643221559 | 2643815469 | 328 |
| 145 | iso_pu_bacteria | 2643221573 | 2643881852 | 328 |
| 146 | iso_pu_bacteria | 2643221586 | 2643941233 | 328 |
| 147 | iso_pu_bacteria | 2643221593 | 2643972980 | 328 |
| 148 | iso_pu_bacteria | 2643221612 | 2644079694 | 328 |
| 149 | iso_pu_bacteria | 2643221720 | 2644662993 | 328 |
| 150 | iso_pu_bacteria | 2643221727 | 2644696156 | 328 |
| 151 | iso_pu_bacteria | 2643221728 | 2644699850 | 328 |
| 152 | iso_pu_bacteria | 2739367700 | 2739732436 | 328 |
| 153 | iso_pu_bacteria | 2928963466 | 2928965114 | 328 |
| 154 | iso_pu_bacteria | 2941489479 | 2941492234 | 328 |
| 155 | 3300013105 | Ga0157369_10119717 | Ga0157369_101197173 | 331 |
| 156 | 3300015685 | Ga0183369_1013 | Ga0183369_101344 | 331 |
| 157 | 3300025242 | Ga0209258_100892 | Ga0209258_1008929 | 331 |
| 158 | 3300049570 | Ga0501033_0000172 | Ga0501033_0000172_28310_29305 | 331 |
| 159 | 3300049822 | Ga0501035_0170233 | Ga0501035_0170233_329_1324 | 331 |
| 160 | 3300001990 | JGI24737J22298_10019881 | JGI24737J22298_100198812 | 332 |
| 161 | 3300003187 | JGI25151J46595_10000347 | JGI25151J46595_1000034720 | 332 |
| 162 | 3300003578 | Ga0006562J51391_1038928 | Ga0006562J51391_103892811 | 332 |
| 163 | 3300003578 | Ga0006562J51391_1038931 | Ga0006562J51391_10389316 | 332 |
| 164 | 3300003756 | Ga0055533_1004413 | Ga0055533_10044132 | 332 |
| 165 | 3300003762 | Ga0055542_1000753 | Ga0055542_10007536 | 332 |
| 166 | 3300005340 | Ga0070689_100041614 | Ga0070689_1000416144 | 332 |
| 167 | 3300005563 | Ga0068855_100010686 | Ga0068855_1000106866 | 332 |
| 168 | 3300005563 | Ga0068855_100026584 | Ga0068855_1000265843 | 332 |
| 169 | 3300005577 | Ga0068857_100002273 | Ga0068857_10000227310 | 332 |
| 170 | 3300005578 | Ga0068854_100002661 | Ga0068854_1000026617 | 332 |
| 171 | 3300005578 | Ga0068854_100006581 | Ga0068854_1000065816 | 332 |
| 172 | 3300005834 | Ga0068851_10000797 | Ga0068851_100007977 | 332 |
| 173 | 3300005843 | Ga0068860_100029071 | Ga0068860_1000290716 | 332 |
| 174 | 3300009093 | Ga0105240_10004902 | Ga0105240_100049027 | 332 |
| 175 | 3300009093 | Ga0105240_10013768 | Ga0105240_100137688 | 332 |
| 176 | 3300009545 | Ga0105237_10000084 | Ga0105237_1000008435 | 332 |
| 177 | 3300012500 | Ga0157314_1000856 | Ga0157314_10008563 | 332 |
| 178 | 3300013105 | Ga0157369_10029124 | Ga0157369_100291242 | 332 |
| 179 | 3300013105 | Ga0157369_10340969 | Ga0157369_103409692 | 332 |
| 180 | 3300014969 | Ga0157376_10158907 | Ga0157376_101589072 | 332 |
| 181 | 3300025226 | Ga0209674_100012 | Ga0209674_100012141 | 332 |
| 182 | 3300025228 | Ga0209672_100621 | Ga0209672_10062120 | 332 |
| 183 | 3300025233 | Ga0209437_100340 | Ga0209437_10034043 | 332 |
| 184 | 3300025250 | Ga0209026_1002761 | Ga0209026_10027613 | 332 |
| 185 | 3300025254 | Ga0209148_1000002 | Ga0209148_1000002961 | 332 |
| 186 | 3300025256 | Ga0209759_1002469 | Ga0209759_10024693 | 332 |
| 187 | 3300025258 | Ga0209129_1003050 | Ga0209129_10030502 | 332 |
| 188 | 3300025261 | Ga0209233_1004941 | Ga0209233_10049414 | 332 |
| 189 | 3300025263 | Ga0209565_1012643 | Ga0209565_10126432 | 332 |
| 190 | 3300025294 | Ga0209025_1000006 | Ga0209025_1000006274 | 332 |
| 191 | 3300025297 | Ga0209758_1000862 | Ga0209758_100086215 | 332 |
| 192 | 3300025297 | Ga0209758_1015504 | Ga0209758_10155044 | 332 |
| 193 | 3300025297 | Ga0209758_1042553 | Ga0209758_10425532 | 332 |
| 194 | 3300025321 | Ga0207656_10013166 | Ga0207656_100131662 | 332 |
| 195 | 3300025904 | Ga0207647_10052107 | Ga0207647_100521072 | 332 |
| 196 | 3300025913 | Ga0207695_10000683 | Ga0207695_1000068336 | 332 |
| 197 | 3300025914 | Ga0207671_10000011 | Ga0207671_10000011330 | 332 |
| 198 | 3300025936 | Ga0207670_10027984 | Ga0207670_100279844 | 332 |
| 199 | 3300025949 | Ga0207667_10000578 | Ga0207667_1000057824 | 332 |
| 200 | 3300025949 | Ga0207667_10001421 | Ga0207667_1000142116 | 332 |
| 201 | 3300025981 | Ga0207640_10000091 | Ga0207640_1000009126 | 332 |
| 202 | 3300025981 | Ga0207640_10002486 | Ga0207640_100024864 | 332 |
| 203 | 3300026116 | Ga0207674_10000217 | Ga0207674_1000021743 | 332 |
| 204 | 3300026142 | Ga0207698_10132421 | Ga0207698_101324212 | 332 |
| 205 | 3300031548 | Ga0307408_100024906 | Ga0307408_1000249063 | 332 |
| 206 | 3300031901 | Ga0307406_10003928 | Ga0307406_100039282 | 332 |
| 207 | 3300031901 | Ga0307406_10023952 | Ga0307406_100239523 | 332 |
| 208 | 3300032005 | Ga0307411_10337946 | Ga0307411_103379462 | 332 |
| 209 | 3300041404 | Ga0439436_0001409 | Ga0439436_0001409_5705_6703 | 332 |
| 210 | 3300041406 | Ga0439439_0002479 | Ga0439439_0002479_1249_2247 | 332 |
| 211 | 3300041407 | Ga0439447_000300 | Ga0439447_000300_8262_9281 | 332 |
| 212 | 3300044672 | Ga0466982_0000018 | Ga0466982_0000018_9667_10680 | 332 |
| 213 | 3300044735 | Ga0466968_0016201 | Ga0466968_0016201_1117_2130 | 332 |
| 214 | 3300044901 | Ga0466960_0095071 | Ga0466960_0095071_456_1469 | 332 |
| 215 | 3300046460 | Ga0495638_0000082 | Ga0495638_0000082_147312_148310 | 332 |
| 216 | 3300046507 | Ga0495606_0000113 | Ga0495606_0000113_40717_41715 | 332 |
| 217 | 3300046542 | Ga0495597_0075230 | Ga0495597_0075230_141_1139 | 332 |
| 218 | 3300046557 | Ga0495622_0063989 | Ga0495622_0063989_35_1033 | 332 |
| 219 | 3300046616 | Ga0495668_0000885 | Ga0495668_0000885_19818_20837 | 332 |
| 220 | 3300046660 | Ga0495625_0017782 | Ga0495625_0017782_3477_4475 | 332 |
| 221 | 3300048907 | Ga0496104_0065585 | Ga0496104_0065585_2311_3309 | 332 |
| 222 | 3300048915 | Ga0496112_0131491 | Ga0496112_0131491_1176_2174 | 332 |
| 223 | 3300048918 | Ga0496115_0000247 | Ga0496115_0000247_41657_42655 | 332 |
| 224 | 3300048918 | Ga0496115_0000642 | Ga0496115_0000642_7949_8947 | 332 |
| 225 | 3300048918 | Ga0496115_0082882 | Ga0496115_0082882_997_1995 | 332 |
| 226 | 3300048924 | Ga0496121_0003982 | Ga0496121_0003982_13495_14517 | 332 |
| 227 | 3300048924 | Ga0496121_0024343 | Ga0496121_0024343_441_1451 | 332 |
| 228 | 3300048928 | Ga0496125_0000239 | Ga0496125_0000239_74474_75484 | 332 |
| 229 | 3300049459 | Ga0495678_021422 | Ga0495678_021422_381_1379 | 332 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7szp-assembly1.cif.gz_B | crystal structure of histidinol-phosphate aminotransferase from klebsiella pneumoniae subsp. pneumoniae (strain hs11286) | 0.8904 | 25 | 327 |
| 1fg3-assembly1.cif.gz_A | crystal structure of l-histidinol phosphate aminotransferase complexed with l-histidinol | 0.8857 | 25 | 322 |
| 7szp-assembly2.cif.gz_D | crystal structure of histidinol-phosphate aminotransferase from klebsiella pneumoniae subsp. pneumoniae (strain hs11286) | 0.8856 | 25 | 322 |
| 7szp-assembly2.cif.gz_C | crystal structure of histidinol-phosphate aminotransferase from klebsiella pneumoniae subsp. pneumoniae (strain hs11286) | 0.8846 | 25 | 322 |
| 1lc7-assembly1.cif.gz_A | crystal structure of l-threonine-o-3-phosphate decarboxylase from s. enterica complexed with a substrate | 0.884 | 4 | 322 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3ftbD02 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.8972 | 54 | 237 | 3.40.640.10 |
| af_Q58365_68_273_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.8755 | 51 | 233 | 3.40.640.10 |
| af_Q2G087_68_261_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.8744 | 55 | 230 | 3.40.640.10 |
| 1fg7A01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.8713 | 46 | 235 | 3.40.640.10 |
| af_P36605_51_267_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.8688 | 54 | 235 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A836PK94-F1-model_v4 | Aminotransferase (EC 2.6.1.-) | 0.989 | 158 | 323 |
GO:0008483
GO:0009058 GO:0030170 |
| AF-V4JLC1-F1-model_v4 | threonine-phosphate decarboxylase (EC 4.1.1.81) (L-threonine-O-3-phosphate decarboxylase) | 0.9821 | 1 | 325 |
GO:0009236
GO:0030170 GO:0048472 |
| AF-A0A7C6WI47-F1-model_v4 | deleted | 0.9788 | 214 | 322 |
|
| AF-A0A3B0ZYW0-F1-model_v4 | threonine-phosphate decarboxylase (EC 4.1.1.81) (L-threonine-O-3-phosphate decarboxylase) | 0.9737 | 4 | 323 |
GO:0009236
GO:0030170 GO:0048472 |
| AF-A0A210XMZ9-F1-model_v4 | deleted | 0.9705 | 247 | 325 |
|
Predicted Structure (AlphaFold2)
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