F341969

General Info

Members Datasets Scaffolds Average Seq Length
229 168 458 370

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10076774|Ga0111539_100767745
Length 406
Sequence MIRVFSALVVENISTTMSISDESKVTPARRIQIAFTDEQEEFRAAIRRFLQEKSPPTEVRRLMETAEGYDPETWRQLSDQLALPGIHIPEPYGGAGFGMVELCIVTEEMGRALLCAPYFSTAVLATDAILNAGTEAQQASLLPDLASGRRLAALAVTEPNGQWDPHAIELVATPVTEGFLLEGAKSYVVDGHVADLLVVAGRVPGTTSSEGLALFTVRADASGVERRLLELMDPTRKLARVDFHGVHAELLGDVNDGAKPLVRTLDQAAIALANEMVGGAQTLFDSAVNYTKLRVQFGRTIGSFQAIKHKCADMLLEMELAKSAAYYAAQAAAAEDPEWPALVCLAKAAASEMYLHIAAECIQIHGGIGFTWDNDTHLWFKRAKSSEVLLGQPYYHRELLLQRWGV

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
54 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
93 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
94 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
95 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
98 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
99 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
100 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
103 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
104 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
107 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
124 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
125 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
132 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
156 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
160 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
164 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
165 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
168 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.2
Metatranscriptomes 4.37
Isolates 0.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.11
Nodule 0.44
Rhizoplane 3.06
Rhizosphere 80.79
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10076774 3300009094 Bacteria 3933
2 JGI25406J46586_10006799 3300003203 Bacteria 5253
3 rootL2_10016785 3300003322 Bacteria 3556
4 rootH1_10013593 3300003323 Bacteria 21319
5 Ga0070658_10000173 3300005327 Bacteria 56301
6 Ga0070683_100151005 3300005329 Bacteria 2202
7 Ga0070680_100331779 3300005336 Bacteria 1292
8 Ga0070668_100005929 3300005347 Bacteria 9056
9 Ga0070669_100003777 3300005353 Bacteria 10939
10 Ga0070667_100015124 3300005367 Bacteria 6373
11 Ga0070667_100147866 3300005367 Bacteria 2062
12 Ga0070709_10002385 3300005434 Bacteria 10177
13 Ga0070714_100086696 3300005435 Bacteria 2736
14 Ga0070714_100087830 3300005435 Bacteria 2719
15 Ga0070714_100096371 3300005435 Bacteria 2599
16 Ga0070714_100303730 3300005435 Bacteria 1488
17 Ga0070713_100019163 3300005436 Bacteria 5216
18 Ga0070713_100035175 3300005436 Bacteria 4030
19 Ga0070710_10002385 3300005437 Bacteria 8890
20 Ga0070705_100062874 3300005440 Bacteria 2212
21 Ga0070705_100142850 3300005440 Bacteria 1577
22 Ga0070681_10063886 3300005458 Bacteria 3654
23 Ga0070681_10244215 3300005458 Bacteria 1709
24 Ga0070706_100079732 3300005467 Bacteria 3031
25 Ga0070706_100103641 3300005467 Bacteria 2645
26 Ga0070698_100015427 3300005471 Bacteria 8072
27 Ga0070698_100066545 3300005471 Bacteria 3626
28 Ga0070679_100015711 3300005530 Bacteria 7280
29 Ga0070679_100023284 3300005530 Bacteria 6060
30 Ga0068853_100139615 3300005539 Bacteria 2175
31 Ga0070665_100023581 3300005548 Bacteria 6195
32 Ga0070665_100490086 3300005548 Bacteria 1240
33 Ga0068855_100128855 3300005563 Bacteria 2891
34 Ga0068859_100025673 3300005617 Bacteria 5909
35 Ga0068859_100061950 3300005617 Bacteria 3770
36 Ga0068864_100093794 3300005618 Bacteria 2652
37 Ga0068863_100002838 3300005841 Bacteria 17159
38 Ga0068860_100001507 3300005843 Bacteria 25102
39 Ga0068860_100077568 3300005843 Bacteria 3159
40 Ga0068860_100084770 3300005843 Bacteria 3014
41 Ga0068862_100001972 3300005844 Bacteria 18617
42 Ga0081455_10001836 3300005937 Bacteria 25562
43 Ga0081538_10000821 3300005981 Bacteria 33702
44 Ga0081538_10005262 3300005981 Bacteria 11685
45 Ga0081539_10000183 3300005985 Bacteria 148051
46 Ga0081539_10005456 3300005985 Bacteria 12972
47 Ga0070717_10061311 3300006028 Bacteria 3116
48 Ga0070717_10066999 3300006028 Bacteria 2986
49 Ga0070717_10228571 3300006028 Bacteria 1637
50 Ga0075365_10131683 3300006038 Bacteria 1731
51 Ga0075363_100051454 3300006048 Bacteria 2197
52 Ga0070712_100002113 3300006175 Bacteria 12211
53 Ga0070712_100219686 3300006175 Bacteria 1504
54 Ga0075367_10071596 3300006178 Bacteria 2085
55 Ga0075369_10028798 3300006186 Bacteria 2330
56 Ga0075430_100017187 3300006846 Bacteria 6159
57 Ga0075431_100215913 3300006847 Bacteria 1958
58 Ga0075431_100287986 3300006847 Bacteria 1662
59 Ga0075434_100033337 3300006871 Bacteria 5082
60 Ga0097620_100025676 3300006931 Bacteria 5909
61 Ga0097620_100061955 3300006931 Bacteria 3770
62 Ga0075435_100002819 3300007076 Bacteria 11627
63 Ga0105250_10011294 3300009092 Unclassified 3706
64 Ga0105240_10010220 3300009093 Bacteria 13210
65 Ga0111539_10006278 3300009094 Bacteria 15343
66 Ga0105247_10000567 3300009101 Bacteria 30080
67 Ga0105248_10000149 3300009177 Bacteria 81262
68 Ga0105249_10001385 3300009553 Bacteria 21227
69 Ga0105249_10041034 3300009553 Bacteria 4205
70 Ga0157369_10053039 3300013105 Bacteria 4384
71 Ga0163162_10063743 3300013306 Bacteria 3729
72 Ga0157372_10084872 3300013307 Bacteria 3591
73 Ga0157375_10167713 3300013308 Bacteria 2341
74 Ga0197907_10081677 3300020069 Bacteria 9184
75 Ga0197907_10633349 3300020069 Bacteria 4195
76 Ga0206349_1319532 3300020075 Bacteria 5663
77 Ga0206349_1428392 3300020075 Bacteria 2228
78 Ga0206355_1026913 3300020076 Bacteria 1878
79 Ga0206350_11027875 3300020080 Bacteria 3504
80 Ga0206354_11116001 3300020081 Bacteria 4601
81 Ga0224712_10004067 3300022467 Bacteria 3901
82 Ga0224712_10004474 3300022467 Bacteria 3777
83 Ga0224712_10008078 3300022467 Bacteria 3096
84 Ga0207692_10004494 3300025898 Bacteria 5529
85 Ga0207710_10000385 3300025900 Bacteria 30161
86 Ga0207699_10000438 3300025906 Bacteria 21255
87 Ga0207684_10170050 3300025910 Bacteria 1879
88 Ga0207707_10281619 3300025912 Bacteria 1440
89 Ga0207695_10014335 3300025913 Bacteria 9400
90 Ga0207693_10001625 3300025915 Bacteria 19855
91 Ga0207693_10004760 3300025915 Bacteria 11413
92 Ga0207663_10000966 3300025916 Bacteria 13139
93 Ga0207660_10075674 3300025917 Bacteria 2460
94 Ga0207660_10131668 3300025917 Bacteria 1904
95 Ga0207657_10039418 3300025919 Bacteria 4199
96 Ga0207657_10053176 3300025919 Bacteria 3509
97 Ga0207646_10093827 3300025922 Bacteria 2688
98 Ga0207681_10112837 3300025923 Bacteria 1980
99 Ga0207700_10000877 3300025928 Bacteria 17346
100 Ga0207700_10016258 3300025928 Bacteria 4939
101 Ga0207700_10129581 3300025928 Bacteria 2058
102 Ga0207700_10166884 3300025928 Bacteria 1833
103 Ga0207664_10002963 3300025929 Bacteria 11273
104 Ga0207664_10006515 3300025929 Bacteria 8035
105 Ga0207664_10007527 3300025929 Bacteria 7555
106 Ga0207664_10100111 3300025929 Bacteria 2393
107 Ga0207711_10000186 3300025941 Bacteria 66552
108 Ga0207667_10289791 3300025949 Bacteria 1673
109 Ga0207712_10000125 3300025961 Bacteria 82077
110 Ga0207712_10047031 3300025961 Bacteria 2994
111 Ga0207658_10001115 3300025986 Bacteria 21719
112 Ga0207703_10019582 3300026035 Bacteria 5288
113 Ga0207641_10001037 3300026088 Bacteria 28179
114 Ga0268266_10012897 3300028379 Bacteria 7215
115 Ga0268265_10000274 3300028380 Bacteria 58577
116 Ga0268265_10053968 3300028380 Bacteria 3047
117 Ga0268264_10000216 3300028381 Bacteria 113846
118 Ga0268264_10069312 3300028381 Bacteria 2982
119 Ga0265337_1000958 3300028556 Bacteria 15120
120 Ga0265334_10000396 3300028573 Bacteria 22934
121 Ga0265322_10025219 3300028654 Bacteria 1700
122 Ga0307515_10024582 3300028794 Bacteria 10489
123 Ga0307515_10139144 3300028794 Bacteria 2616
124 Ga0265338_10001140 3300028800 Bacteria 43976
125 Ga0265338_10020215 3300028800 Bacteria 7016
126 Ga0265332_10000752 3300031238 Bacteria 20031
127 Ga0265340_10024230 3300031247 Bacteria 3084
128 Ga0265316_10161436 3300031344 Bacteria 1675
129 Ga0307513_10036972 3300031456 Bacteria 5438
130 Ga0307509_10290453 3300031507 Bacteria 1390
131 Ga0316578_10154832 3300031728 Bacteria 1381
132 Ga0307416_100164089 3300032002 Bacteria 2058
133 Ga0307507_10000090 3300033179 Bacteria 142457
134 Ga0307510_10000524 3300033180 Bacteria 38226
135 Ga0307510_10082385 3300033180 Bacteria 3113
136 Ga0373934_0013918 3300035086 Bacteria 3044
137 Ga0373956_0013849 3300035119 Bacteria 3360
138 Ga0373956_0049182 3300035119 Bacteria 1891
139 Ga0373955_0014450 3300035172 Bacteria 3841
140 Ga0373955_0142306 3300035172 Bacteria 1407
141 Ga0316574_0040009 3300035398 Bacteria 2885
142 Ga0373927_0060792 3300035695 Bacteria 2445
143 Ga0373933_0013969 3300035724 Bacteria 4455
144 Ga0373933_0020129 3300035724 Bacteria 3780
145 Ga0373947_0172836 3300035725 Bacteria 1403
146 Ga0373937_0082925 3300036401 Bacteria 2966
147 Ga0373937_0374927 3300036401 Bacteria 1349
148 Ga0316584_0110592 3300036712 Bacteria 2056
149 Ga0395905_0257288 3300037471 Bacteria 1630
150 Ga0400485_03357 3300038735 Bacteria 11781
151 Ga0436365_0107561 3300039437 Bacteria 2340
152 Ga0436363_0010384 3300039450 Bacteria 2018
153 Ga0439463_005512 3300042016 Bacteria 3145
154 Ga0451577_0003529 3300042876 Bacteria 17312
155 Ga0466966_0140118 3300044684 Bacteria 1478
156 Ga0466961_0001447 3300044693 Bacteria 14747
157 Ga0466961_0002747 3300044693 Bacteria 10944
158 Ga0466961_0030806 3300044693 Bacteria 3447
159 Ga0453684_0038205 3300044712 Bacteria 6568
160 Ga0466967_0137510 3300045976 Bacteria 2273
161 Ga0495638_0095622 3300046460 Bacteria 1784
162 Ga0495651_0113946 3300046462 Bacteria 1995
163 Ga0495653_0014971 3300046463 Bacteria 6325
164 Ga0495583_0034676 3300046506 Bacteria 2415
165 Ga0495608_0044007 3300046511 Bacteria 2982
166 Ga0495608_0162806 3300046511 Bacteria 1418
167 Ga0495630_0208935 3300046517 Bacteria 1490
168 Ga0495648_0001318 3300046524 Bacteria 24607
169 Ga0495654_0043461 3300046530 Bacteria 2227
170 Ga0495667_0002672 3300046559 Bacteria 11912
171 Ga0495668_0036777 3300046616 Bacteria 2742
172 Ga0495611_0094100 3300046648 Bacteria 1386
173 Ga0495635_0006183 3300046663 Bacteria 8344
174 Ga0495657_0043625 3300046675 Bacteria 3057
175 Ga0495613_0026786 3300046689 Bacteria 4294
176 Ga0495600_0026327 3300046809 Bacteria 3754
177 Ga0495674_0150861 3300047319 Bacteria 1949
178 Ga0495672_0002488 3300047320 Bacteria 16859
179 Ga0495680_0005391 3300047322 Bacteria 12055
180 Ga0495680_0031600 3300047322 Bacteria 4306
181 Ga0495680_0046901 3300047322 Bacteria 3404
182 Ga0495680_0117276 3300047322 Bacteria 1968
183 Ga0495673_0001414 3300047469 Bacteria 19239
184 Ga0495684_0018774 3300047471 Bacteria 5328
185 Ga0496101_0002383 3300048904 Bacteria 11537
186 Ga0496102_0001121 3300048905 Bacteria 24553
187 Ga0496102_0012917 3300048905 Bacteria 7231
188 Ga0496103_0043573 3300048906 Bacteria 2763
189 Ga0496104_0259767 3300048907 Bacteria 1650
190 Ga0496105_0163956 3300048908 Bacteria 1824
191 Ga0496109_0022232 3300048912 Bacteria 5616
192 Ga0496116_0008851 3300048919 Bacteria 8666
193 Ga0496116_0018679 3300048919 Bacteria 5330
194 Ga0496117_0031912 3300048920 Bacteria 4013
195 Ga0496118_0000849 3300048921 Bacteria 48523
196 Ga0496119_0028494 3300048922 Bacteria 3808
197 Ga0496120_0001515 3300048923 Bacteria 27422
198 Ga0496121_0000969 3300048924 Bacteria 51507
199 Ga0496125_0028584 3300048928 Bacteria 5031
200 Ga0496126_0000026 3300048929 Bacteria 422310
201 Ga0496126_0004657 3300048929 Bacteria 16216
202 Ga0501034_0000419 3300049571 Bacteria 71157
203 Ga0501034_0001744 3300049571 Bacteria 27918
204 Ga0501034_0004838 3300049571 Bacteria 14877
205 Ga0501034_0013683 3300049571 Bacteria 8342
206 Ga0501039_0100123 3300049575 Bacteria 2262
207 Ga0501040_0173733 3300049576 Bacteria 1526
208 Ga0501047_0335652 3300049581 Bacteria 1350
209 Ga0501071_0130012 3300049587 Bacteria 1870
210 Ga0501072_0174510 3300049588 Bacteria 1715
211 Ga0501075_0032667 3300049591 Bacteria 3868
212 Ga0501075_0157418 3300049591 Bacteria 1732
213 Ga0501045_0081294 3300049824 Bacteria 2389
214 nmdc:mga03n38_13622_c1 3300050490 Bacteria 3094
215 nmdc:mga06z11_136118_c1 3300050494 Bacteria 1384
216 nmdc:mga06z11_32867_c1 3300050494 Bacteria 2533
217 nmdc:mga06z11_35028_c1 3300050494 Bacteria 2468
218 nmdc:mga08y16_24225_c1 3300050511 Bacteria 6407
219 nmdc:mga0rr50_107127_c1 3300050513 Bacteria 2206
220 nmdc:mga0sz30_23904_c1 3300050516 Bacteria 2140
221 Ga0500635_0083677 3300053080 Bacteria 1150
222 Ga0495619_0199266 3300053085 Bacteria 1386
223 Ga0500644_0007869 3300053088 Bacteria 2791
224 Ga0500597_082741 3300053120 Bacteria 1393
225 Ga0500624_000085 3300053157 Bacteria 47798
226 Ga0500637_0037239 3300053178 Bacteria 2733
227 Ga0501084_0000119 3300054114 Bacteria 59776
228 Ga0530510_0007337 3300061734 Bacteria 7675
229 8002790961 8002784119 Bacteria 9788632
230 Ga0111539_10076774
231 JGI25406J46586_10006799
232 rootL2_10016785
233 rootH1_10013593
234 Ga0070658_10000173
235 Ga0070683_100151005
236 Ga0070680_100331779
237 Ga0070668_100005929
238 Ga0070669_100003777
239 Ga0070667_100015124
240 Ga0070667_100147866
241 Ga0070709_10002385
242 Ga0070714_100086696
243 Ga0070714_100087830
244 Ga0070714_100096371
245 Ga0070714_100303730
246 Ga0070713_100019163
247 Ga0070713_100035175
248 Ga0070710_10002385
249 Ga0070705_100062874
250 Ga0070705_100142850
251 Ga0070681_10063886
252 Ga0070681_10244215
253 Ga0070706_100079732
254 Ga0070706_100103641
255 Ga0070698_100015427
256 Ga0070698_100066545
257 Ga0070679_100015711
258 Ga0070679_100023284
259 Ga0068853_100139615
260 Ga0070665_100023581
261 Ga0070665_100490086
262 Ga0068855_100128855
263 Ga0068859_100025673
264 Ga0068859_100061950
265 Ga0068864_100093794
266 Ga0068863_100002838
267 Ga0068860_100001507
268 Ga0068860_100077568
269 Ga0068860_100084770
270 Ga0068862_100001972
271 Ga0081455_10001836
272 Ga0081538_10000821
273 Ga0081538_10005262
274 Ga0081539_10000183
275 Ga0081539_10005456
276 Ga0070717_10061311
277 Ga0070717_10066999
278 Ga0070717_10228571
279 Ga0075365_10131683
280 Ga0075363_100051454
281 Ga0070712_100002113
282 Ga0070712_100219686
283 Ga0075367_10071596
284 Ga0075369_10028798
285 Ga0075430_100017187
286 Ga0075431_100215913
287 Ga0075431_100287986
288 Ga0075434_100033337
289 Ga0097620_100025676
290 Ga0097620_100061955
291 Ga0075435_100002819
292 Ga0105250_10011294
293 Ga0105240_10010220
294 Ga0111539_10006278
295 Ga0105247_10000567
296 Ga0105248_10000149
297 Ga0105249_10001385
298 Ga0105249_10041034
299 Ga0157369_10053039
300 Ga0163162_10063743
301 Ga0157372_10084872
302 Ga0157375_10167713
303 Ga0197907_10081677
304 Ga0197907_10633349
305 Ga0206349_1319532
306 Ga0206349_1428392
307 Ga0206355_1026913
308 Ga0206350_11027875
309 Ga0206354_11116001
310 Ga0224712_10004067
311 Ga0224712_10004474
312 Ga0224712_10008078
313 Ga0207692_10004494
314 Ga0207710_10000385
315 Ga0207699_10000438
316 Ga0207684_10170050
317 Ga0207707_10281619
318 Ga0207695_10014335
319 Ga0207693_10001625
320 Ga0207693_10004760
321 Ga0207663_10000966
322 Ga0207660_10075674
323 Ga0207660_10131668
324 Ga0207657_10039418
325 Ga0207657_10053176
326 Ga0207646_10093827
327 Ga0207681_10112837
328 Ga0207700_10000877
329 Ga0207700_10016258
330 Ga0207700_10129581
331 Ga0207700_10166884
332 Ga0207664_10002963
333 Ga0207664_10006515
334 Ga0207664_10007527
335 Ga0207664_10100111
336 Ga0207711_10000186
337 Ga0207667_10289791
338 Ga0207712_10000125
339 Ga0207712_10047031
340 Ga0207658_10001115
341 Ga0207703_10019582
342 Ga0207641_10001037
343 Ga0268266_10012897
344 Ga0268265_10000274
345 Ga0268265_10053968
346 Ga0268264_10000216
347 Ga0268264_10069312
348 Ga0265337_1000958
349 Ga0265334_10000396
350 Ga0265322_10025219
351 Ga0307515_10024582
352 Ga0307515_10139144
353 Ga0265338_10001140
354 Ga0265338_10020215
355 Ga0265332_10000752
356 Ga0265340_10024230
357 Ga0265316_10161436
358 Ga0307513_10036972
359 Ga0307509_10290453
360 Ga0316578_10154832
361 Ga0307416_100164089
362 Ga0307507_10000090
363 Ga0307510_10000524
364 Ga0307510_10082385
365 Ga0373934_0013918
366 Ga0373956_0013849
367 Ga0373956_0049182
368 Ga0373955_0014450
369 Ga0373955_0142306
370 Ga0316574_0040009
371 Ga0373927_0060792
372 Ga0373933_0013969
373 Ga0373933_0020129
374 Ga0373947_0172836
375 Ga0373937_0082925
376 Ga0373937_0374927
377 Ga0316584_0110592
378 Ga0395905_0257288
379 Ga0400485_03357
380 Ga0436365_0107561
381 Ga0436363_0010384
382 Ga0439463_005512
383 Ga0451577_0003529
384 Ga0466966_0140118
385 Ga0466961_0001447
386 Ga0466961_0002747
387 Ga0466961_0030806
388 Ga0453684_0038205
389 Ga0466967_0137510
390 Ga0495638_0095622
391 Ga0495651_0113946
392 Ga0495653_0014971
393 Ga0495583_0034676
394 Ga0495608_0044007
395 Ga0495608_0162806
396 Ga0495630_0208935
397 Ga0495648_0001318
398 Ga0495654_0043461
399 Ga0495667_0002672
400 Ga0495668_0036777
401 Ga0495611_0094100
402 Ga0495635_0006183
403 Ga0495657_0043625
404 Ga0495613_0026786
405 Ga0495600_0026327
406 Ga0495674_0150861
407 Ga0495672_0002488
408 Ga0495680_0005391
409 Ga0495680_0031600
410 Ga0495680_0046901
411 Ga0495680_0117276
412 Ga0495673_0001414
413 Ga0495684_0018774
414 Ga0496101_0002383
415 Ga0496102_0001121
416 Ga0496102_0012917
417 Ga0496103_0043573
418 Ga0496104_0259767
419 Ga0496105_0163956
420 Ga0496109_0022232
421 Ga0496116_0008851
422 Ga0496116_0018679
423 Ga0496117_0031912
424 Ga0496118_0000849
425 Ga0496119_0028494
426 Ga0496120_0001515
427 Ga0496121_0000969
428 Ga0496125_0028584
429 Ga0496126_0000026
430 Ga0496126_0004657
431 Ga0501034_0000419
432 Ga0501034_0001744
433 Ga0501034_0004838
434 Ga0501034_0013683
435 Ga0501039_0100123
436 Ga0501040_0173733
437 Ga0501047_0335652
438 Ga0501071_0130012
439 Ga0501072_0174510
440 Ga0501075_0032667
441 Ga0501075_0157418
442 Ga0501045_0081294
443 nmdc:mga03n38_13622_c1
444 nmdc:mga06z11_136118_c1
445 nmdc:mga06z11_32867_c1
446 nmdc:mga06z11_35028_c1
447 nmdc:mga08y16_24225_c1
448 nmdc:mga0rr50_107127_c1
449 nmdc:mga0sz30_23904_c1
450 Ga0500635_0083677
451 Ga0495619_0199266
452 Ga0500644_0007869
453 Ga0500597_082741
454 Ga0500624_000085
455 Ga0500637_0037239
456 Ga0501084_0000119
457 Ga0530510_0007337
458 8002790961

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

255

404

0.96

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

270

376

0.89

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

36

149

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3owa-assembly2.cif.gz_C crystal structure of acyl-coa dehydrogenase complexed with fad from bacillus anthracis 0.9434 1 365
1jqi-assembly1.cif.gz_B crystal structure of rat short chain acyl-coa dehydrogenase complexed with acetoacetyl-coa 0.9362 1 365
2dvl-assembly1.cif.gz_A crystal structure of project tt0160 from thermus thermophilus hb8 0.936 1 367
1ivh-assembly1.cif.gz_B structure of human isovaleryl-coa dehydrogenase at 2.6 angstroms resolution: structural basis for substrate specificity 0.936 1 366
2vig-assembly1.cif.gz_D crystal structure of human short-chain acyl coa dehydrogenase 0.9359 1 365
ID Description Score Start End Superfamily
af_Q9VDT1_256_405_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.983 223 365 1.20.140.10
af_P96397_240_357_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9827 223 338 1.20.140.10
af_P95281_215_360_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9819 225 367 1.20.140.10
af_Q6AXI7_256_405_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9814 223 365 1.20.140.10
2cx9B03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9803 222 365 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A523KIR2-F1-model_v4 Acyl-CoA dehydrogenase 0.9905 246 366 GO:0003995
AF-A0A7K2A8B9-F1-model_v4 Acyl-CoA dehydrogenase 0.9898 1 367 GO:0003995
GO:0050660
AF-A0A7K2A8B9-F1-model_v4 Acyl-CoA dehydrogenase 0.9871 1 367 GO:0003995
GO:0050660
AF-A0A6I3HST0-F1-model_v4 Acyl-CoA dehydrogenase 0.9864 210 367 GO:0003995
AF-A0A2P8PYG2-F1-model_v4 Acyl-CoA dehydrogenase 0.9847 1 367 GO:0003995
GO:0050660

Map