F341542
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 228 | 182 | 456 | 364 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|8003856774|8003859088 |
| Length | 399 |
| Sequence | GEHDGWRARTRQGTTGHVPQRTGRSRTKGDSVTTPGKTRVALVFGGRSPEHGISCVSAGSVLSALDPDEFEVVPVGITRAGQWVLTNGDPATLAIQARRLPEITETSGAAVVLPADPTGNGLLVLDPTDGPRALADVDVVFPVLHGAYGEDGTIQGMLEMAGIPYVGANVFASAAAMDKEFTKKLCAAEGIPVGPYAVLRSGATLSEADKERLGLPVFVKPSRAGSSFGITKVDDWSRLDAAVAAARQIDPKVLVEGAIVGREIECGVLEGEAGGSPEASLLAEVRVVGDHDFYDFEAKYIDSESSCEYDIPAELPDRVTAQVREYATRAFTALDCAGLARVDFFVTPDLEIYLNEINTMPGFTPSSMFPRMWAAAGLEYPKLVNRLIRTALRRGVGLH |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 15 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 16 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 17 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 18 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 19 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 20 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 21 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 22 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 23 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 24 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 25 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 26 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 27 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 39 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 40 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 56 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 57 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 58 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 59 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 60 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 61 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 62 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 63 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 64 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 65 | 3300031889 | Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO | Metagenome | Rhizosphere |
| 66 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 67 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 68 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 69 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 70 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 71 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 72 | 3300035091 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 | Metagenome | Rhizosphere |
| 73 | 3300035207 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 | Metagenome | Rhizosphere |
| 74 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 75 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 76 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 77 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 78 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 79 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 80 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 81 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 82 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 91 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 92 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 93 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 94 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 95 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 96 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 97 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 98 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 99 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 100 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 101 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 102 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 103 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 104 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 105 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 106 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 107 | 3300053098 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere | Metagenome | Endosphere |
| 108 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 109 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 110 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 111 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 112 | 2508501039 | Frankia saprophytica CN3 | Isolate | Nodule |
| 113 | 2515154088 | Salinispora arenicola CNT800 | Isolate | Rhizosphere |
| 114 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 115 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 116 | 2515154202 | Salinispora pacifica CNT084 | Isolate | Rhizosphere |
| 117 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 118 | 2517572101 | Frankia sp. DC12 | Isolate | Nodule |
| 119 | 2527291627 | Frankia casuarinae Thr | Isolate | Nodule |
| 120 | 2527291629 | Frankia sp. BMG5.23 | Isolate | Nodule |
| 121 | 2546825537 | Frankia sp. CcI6 | Isolate | Rhizoplane |
| 122 | 2576861822 | Frankia sp. CeD | Isolate | Nodule |
| 123 | 2579778521 | Frankia torreyi CpI1-S | Isolate | Unclassified |
| 124 | 2619618881 | Frankia sp. ACN1ag | Isolate | Unclassified |
| 125 | 2619619003 | Frankia sp. CpI1-P | Isolate | Nodule |
| 126 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 127 | 2626541554 | Frankia sp. AvcI.1 | Isolate | Nodule |
| 128 | 2671180195 | Frankia sp. CcI49 | Isolate | Nodule |
| 129 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 130 | 2675903059 | Asanoa hainanensis CGMCC 4.5593 | Isolate | Rhizosphere |
| 131 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 132 | 2684623036 | Frankia sp. CgIM4 | Isolate | Nodule |
| 133 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 134 | 2687453743 | Frankia colletiae Cc1.17 | Isolate | Nodule |
| 135 | 2710264753 | Frankia sp. KB5 | Isolate | Nodule |
| 136 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 137 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 138 | 2773857922 | Frankia sp. CcI49 | Isolate | Nodule |
| 139 | 2773857924 | Frankia sp. CgIS1 | Isolate | Nodule |
| 140 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 141 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 142 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 143 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 144 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 145 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 146 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 147 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 148 | 2858868258 | Micromonospora sp. MH33 | Isolate | Unclassified |
| 149 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 150 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 151 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 152 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 153 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 154 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 155 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 156 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 157 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 158 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 159 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 160 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 161 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 162 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 163 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 164 | 2895880812 | Frankia sp. BMG5.11 | Isolate | Unclassified |
| 165 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 166 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 167 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 168 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 169 | 637000116 | Frankia casuarinae CcI3 | Isolate | Nodule |
| 170 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 171 | 8001781756 | Catellatospora tritici NEAU-YM18 | Isolate | Rhizosphere |
| 172 | 8002775197 | Frankia nepalensis CN7 | Isolate | Nodule |
| 173 | 8002784119 | Frankia sp. AgB1.9 | Isolate | Nodule |
| 174 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 175 | 8003870546 | Micromonospora tarensis STR1s_6 | Isolate | Rhizosphere |
| 176 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 177 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 178 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 179 | 8054913762 | Frankia gtarii Agncl-10 | Isolate | Nodule |
| 180 | 8054920844 | Frankia tisae Agncl-8 | Isolate | Nodule |
| 181 | 8055157932 | Frankia umida Ag45/Mut15 | Isolate | Nodule |
| 182 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 67.11 |
| Metatranscriptomes | 0.88 |
| Isolates | 32.02 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.75 |
| Nodule | 12.28 |
| Rhizoplane | 4.82 |
| Rhizosphere | 57.89 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25406J46586_10002817 | 3300003203 | Bacteria | 8179 |
| 2 | Ga0070658_10144173 | 3300005327 | Bacteria | 1991 |
| 3 | Ga0070683_100265933 | 3300005329 | Bacteria | 1631 |
| 4 | Ga0070682_100079589 | 3300005337 | Bacteria | 2117 |
| 5 | Ga0070660_100100694 | 3300005339 | Bacteria | 2289 |
| 6 | Ga0070661_100053840 | 3300005344 | Bacteria | 2946 |
| 7 | Ga0070668_100002069 | 3300005347 | Bacteria | 14662 |
| 8 | Ga0070668_100100301 | 3300005347 | Bacteria | 2294 |
| 9 | Ga0070669_100066043 | 3300005353 | Bacteria | 2666 |
| 10 | Ga0070667_100123418 | 3300005367 | Bacteria | 2255 |
| 11 | Ga0070713_100033429 | 3300005436 | Bacteria | 4119 |
| 12 | Ga0070713_100174399 | 3300005436 | Bacteria | 1928 |
| 13 | Ga0070679_100230642 | 3300005530 | Bacteria | 1811 |
| 14 | Ga0070684_100268781 | 3300005535 | Bacteria | 1560 |
| 15 | Ga0070665_100049880 | 3300005548 | Bacteria | 4200 |
| 16 | Ga0068857_100049044 | 3300005577 | Bacteria | 3746 |
| 17 | Ga0068859_100000643 | 3300005617 | Bacteria | 34907 |
| 18 | Ga0068864_100011086 | 3300005618 | Bacteria | 7449 |
| 19 | Ga0068858_100000003 | 3300005842 | Bacteria | 349151 |
| 20 | Ga0068858_100065721 | 3300005842 | Bacteria | 3357 |
| 21 | Ga0068860_100055769 | 3300005843 | Bacteria | 3757 |
| 22 | Ga0068862_100000110 | 3300005844 | Bacteria | 97889 |
| 23 | Ga0068862_100130343 | 3300005844 | Bacteria | 2224 |
| 24 | Ga0081540_1002066 | 3300005983 | Bacteria | 16743 |
| 25 | Ga0081540_1011249 | 3300005983 | Bacteria | 5995 |
| 26 | Ga0081539_10000613 | 3300005985 | Bacteria | 72150 |
| 27 | Ga0081539_10001544 | 3300005985 | Bacteria | 38499 |
| 28 | Ga0081539_10008411 | 3300005985 | Bacteria | 9003 |
| 29 | Ga0081539_10009503 | 3300005985 | Bacteria | 8105 |
| 30 | Ga0075364_10134168 | 3300006051 | Bacteria | 1663 |
| 31 | Ga0075428_100000717 | 3300006844 | Bacteria | 34354 |
| 32 | Ga0075428_100016824 | 3300006844 | Bacteria | 8075 |
| 33 | Ga0075430_100006229 | 3300006846 | Bacteria | 10064 |
| 34 | Ga0075430_100094952 | 3300006846 | Bacteria | 2493 |
| 35 | Ga0075431_100071062 | 3300006847 | Bacteria | 3590 |
| 36 | Ga0075429_100011645 | 3300006880 | Bacteria | 7627 |
| 37 | Ga0097620_100000643 | 3300006931 | Bacteria | 34907 |
| 38 | Ga0105251_10052636 | 3300009011 | Bacteria | 1938 |
| 39 | Ga0111539_10340914 | 3300009094 | Bacteria | 1745 |
| 40 | Ga0105245_10396183 | 3300009098 | Bacteria | 1378 |
| 41 | Ga0105247_10000014 | 3300009101 | Bacteria | 285043 |
| 42 | Ga0105247_10000296 | 3300009101 | Bacteria | 44916 |
| 43 | Ga0105247_10125881 | 3300009101 | Bacteria | 1665 |
| 44 | Ga0114129_10000007 | 3300009147 | Bacteria | 156645 |
| 45 | Ga0114129_10026879 | 3300009147 | Bacteria | 8146 |
| 46 | Ga0114129_10055033 | 3300009147 | Bacteria | 5577 |
| 47 | Ga0114129_10326406 | 3300009147 | Bacteria | 2039 |
| 48 | Ga0105248_10000038 | 3300009177 | Bacteria | 179916 |
| 49 | Ga0105248_10005304 | 3300009177 | Bacteria | 14190 |
| 50 | Ga0105248_10008292 | 3300009177 | Bacteria | 11414 |
| 51 | Ga0105239_10565410 | 3300010375 | Bacteria | 1295 |
| 52 | Ga0157378_10198036 | 3300013297 | Bacteria | 1898 |
| 53 | Ga0163163_10005892 | 3300014325 | Bacteria | 10664 |
| 54 | Ga0163163_10020091 | 3300014325 | Bacteria | 6287 |
| 55 | Ga0163163_10032718 | 3300014325 | Bacteria | 5024 |
| 56 | Ga0163163_10298193 | 3300014325 | Bacteria | 1664 |
| 57 | Ga0157379_10000800 | 3300014968 | Bacteria | 25529 |
| 58 | Ga0157379_10002987 | 3300014968 | Bacteria | 14264 |
| 59 | Ga0197907_10663270 | 3300020069 | Bacteria | 1647 |
| 60 | Ga0206354_11197936 | 3300020081 | Bacteria | 2198 |
| 61 | Ga0207710_10000020 | 3300025900 | Bacteria | 338425 |
| 62 | Ga0207710_10000031 | 3300025900 | Bacteria | 285157 |
| 63 | Ga0207707_10056746 | 3300025912 | Bacteria | 3407 |
| 64 | Ga0207693_10103969 | 3300025915 | Bacteria | 2227 |
| 65 | Ga0207660_10051113 | 3300025917 | Bacteria | 2937 |
| 66 | Ga0207657_10029730 | 3300025919 | Bacteria | 4969 |
| 67 | Ga0207687_10110343 | 3300025927 | Bacteria | 2040 |
| 68 | Ga0207700_10039014 | 3300025928 | Bacteria | 3452 |
| 69 | Ga0207711_10000152 | 3300025941 | Bacteria | 73929 |
| 70 | Ga0207711_10001989 | 3300025941 | Bacteria | 18519 |
| 71 | Ga0207661_10004513 | 3300025944 | Bacteria | 9756 |
| 72 | Ga0207668_10000508 | 3300025972 | Bacteria | 24387 |
| 73 | Ga0207703_10000006 | 3300026035 | Bacteria | 502351 |
| 74 | Ga0207703_10016604 | 3300026035 | Bacteria | 5742 |
| 75 | Ga0207676_10010535 | 3300026095 | Bacteria | 6587 |
| 76 | Ga0207676_10057988 | 3300026095 | Bacteria | 3052 |
| 77 | Ga0207674_10025466 | 3300026116 | Bacteria | 6309 |
| 78 | Ga0268265_10000066 | 3300028380 | Bacteria | 142517 |
| 79 | Ga0268264_10207047 | 3300028381 | Bacteria | 1798 |
| 80 | Ga0307517_10042290 | 3300028786 | Bacteria | 4893 |
| 81 | Ga0307515_10000045 | 3300028794 | Bacteria | 301029 |
| 82 | Ga0307515_10005558 | 3300028794 | Bacteria | 25511 |
| 83 | Ga0307515_10029340 | 3300028794 | Bacteria | 9303 |
| 84 | Ga0307512_10012959 | 3300030522 | Bacteria | 7838 |
| 85 | Ga0307512_10053225 | 3300030522 | Bacteria | 3221 |
| 86 | Ga0307513_10003731 | 3300031456 | Bacteria | 20589 |
| 87 | Ga0307513_10009153 | 3300031456 | Bacteria | 12546 |
| 88 | Ga0307513_10048024 | 3300031456 | Bacteria | 4637 |
| 89 | Ga0307408_100215322 | 3300031548 | Bacteria | 1564 |
| 90 | Ga0307508_10000774 | 3300031616 | Bacteria | 37828 |
| 91 | Ga0307516_10020069 | 3300031730 | Bacteria | 6909 |
| 92 | Ga0307405_10002914 | 3300031731 | Bacteria | 7713 |
| 93 | Ga0307405_10005869 | 3300031731 | Bacteria | 5980 |
| 94 | Ga0307413_10068347 | 3300031824 | Bacteria | 2225 |
| 95 | Ga0307410_10032303 | 3300031852 | Bacteria | 3367 |
| 96 | Ga0307410_10118716 | 3300031852 | Bacteria | 1925 |
| 97 | Ga0326468_10000205 | 3300031889 | Bacteria | 6109 |
| 98 | Ga0307406_10004361 | 3300031901 | Bacteria | 7698 |
| 99 | Ga0307407_10031998 | 3300031903 | Bacteria | 2855 |
| 100 | Ga0307409_100001105 | 3300031995 | Bacteria | 12748 |
| 101 | Ga0307409_100011497 | 3300031995 | Bacteria | 5587 |
| 102 | Ga0307409_100258570 | 3300031995 | Bacteria | 1596 |
| 103 | Ga0307416_100000814 | 3300032002 | Bacteria | 16383 |
| 104 | Ga0307415_100000231 | 3300032126 | Bacteria | 24459 |
| 105 | Ga0307415_100022619 | 3300032126 | Bacteria | 3884 |
| 106 | Ga0307507_10160858 | 3300033179 | Bacteria | 1660 |
| 107 | Ga0373951_0000004 | 3300035091 | Bacteria | 95240 |
| 108 | Ga0373942_0000490 | 3300035207 | Bacteria | 11215 |
| 109 | Ga0373935_0034678 | 3300035692 | Bacteria | 3147 |
| 110 | Ga0373937_0160837 | 3300036401 | Bacteria | 2105 |
| 111 | Ga0395899_0043109 | 3300037312 | Bacteria | 3366 |
| 112 | Ga0395900_0008291 | 3300037418 | Bacteria | 10693 |
| 113 | Ga0395905_0089485 | 3300037471 | Bacteria | 2885 |
| 114 | Ga0395901_0017703 | 3300038443 | Bacteria | 7274 |
| 115 | Ga0451793_0506242 | 3300041452 | Bacteria | 1423 |
| 116 | Ga0451853_4026905 | 3300041512 | Bacteria | 4113 |
| 117 | Ga0495606_0002403 | 3300046507 | Bacteria | 21862 |
| 118 | Ga0495632_0027255 | 3300046519 | Bacteria | 2995 |
| 119 | Ga0495648_0037503 | 3300046524 | Bacteria | 3113 |
| 120 | Ga0495667_0152967 | 3300046559 | Bacteria | 1485 |
| 121 | Ga0495668_0000566 | 3300046616 | Bacteria | 45529 |
| 122 | Ga0495625_0001428 | 3300046660 | Bacteria | 29132 |
| 123 | Ga0495674_0309820 | 3300047319 | Bacteria | 1288 |
| 124 | Ga0495626_0000129 | 3300048091 | Bacteria | 95400 |
| 125 | Ga0496103_0188098 | 3300048906 | Bacteria | 1327 |
| 126 | Ga0496104_0109992 | 3300048907 | Bacteria | 2641 |
| 127 | Ga0496105_0007400 | 3300048908 | Bacteria | 8500 |
| 128 | Ga0496108_0000048 | 3300048911 | Bacteria | 133539 |
| 129 | Ga0496108_0003085 | 3300048911 | Bacteria | 13389 |
| 130 | Ga0496111_0091683 | 3300048914 | Bacteria | 2227 |
| 131 | Ga0496112_0006767 | 3300048915 | Bacteria | 10100 |
| 132 | Ga0496112_0115540 | 3300048915 | Bacteria | 2654 |
| 133 | Ga0496113_0038324 | 3300048916 | Bacteria | 3523 |
| 134 | Ga0496116_0000665 | 3300048919 | Bacteria | 44795 |
| 135 | Ga0496117_0046563 | 3300048920 | Bacteria | 3118 |
| 136 | Ga0496118_0000900 | 3300048921 | Bacteria | 46556 |
| 137 | Ga0496118_0004221 | 3300048921 | Bacteria | 17251 |
| 138 | Ga0496119_0000405 | 3300048922 | Bacteria | 59163 |
| 139 | Ga0496119_0013365 | 3300048922 | Bacteria | 6551 |
| 140 | Ga0496120_0000401 | 3300048923 | Bacteria | 69936 |
| 141 | Ga0496121_0015703 | 3300048924 | Bacteria | 7895 |
| 142 | Ga0496121_0019268 | 3300048924 | Bacteria | 6830 |
| 143 | Ga0501047_0006079 | 3300049581 | Bacteria | 11347 |
| 144 | nmdc:mga05p37_4429_c1 | 3300050507 | Bacteria | 16411 |
| 145 | nmdc:mga05p37_52835_c1 | 3300050507 | Bacteria | 4996 |
| 146 | nmdc:mga05p37_697314_c1 | 3300050507 | Bacteria | 1128 |
| 147 | nmdc:mga05p37_71115_c1 | 3300050507 | Bacteria | 4280 |
| 148 | nmdc:mga05p37_806_c1 | 3300050507 | Bacteria | 34541 |
| 149 | nmdc:mga0qj67_13876_c1 | 3300050509 | Bacteria | 6083 |
| 150 | nmdc:mga0qj67_225_c1 | 3300050509 | Bacteria | 38360 |
| 151 | nmdc:mga0qj67_367947_c1 | 3300050509 | Bacteria | 1161 |
| 152 | nmdc:mga06r32_320001_c1 | 3300050510 | Bacteria | 1537 |
| 153 | Ga0500650_0084952 | 3300053098 | Bacteria | 1481 |
| 154 | Ga0500569_017296 | 3300053109 | Bacteria | 1841 |
| 155 | Ga0500616_0100044 | 3300053153 | Bacteria | 1419 |
| 156 | 8003859088 | 8003856774 | Bacteria | 7675274 |
| 157 | 2501945320 | 2501939600 | Bacteria | 6907073 |
| 158 | 2508677392 | 2508501039 | Bacteria | 9978592 |
| 159 | 2515496062 | 2515154088 | Bacteria | 5526283 |
| 160 | 2515719834 | 2515154129 | Bacteria | 5584369 |
| 161 | 2515757900 | 2515154137 | Bacteria | 5711575 |
| 162 | 2516082384 | 2515154202 | Bacteria | 5471270 |
| 163 | 2516090326 | 2515154203 | Bacteria | 5458536 |
| 164 | 2517760410 | 2517572101 | Bacteria | 6884336 |
| 165 | 2528202943 | 2527291627 | Bacteria | 5309833 |
| 166 | 2528213380 | 2527291629 | Bacteria | 5267418 |
| 167 | 2546947819 | 2546825537 | Bacteria | 5389291 |
| 168 | 2579749566 | 2576861822 | Bacteria | 5004595 |
| 169 | 2579855710 | 2579778521 | Bacteria | 7624758 |
| 170 | 2619857486 | 2619618881 | Bacteria | 7521104 |
| 171 | 2620348212 | 2619619003 | Bacteria | 7619552 |
| 172 | 2623587172 | 2622736626 | Bacteria | 7181580 |
| 173 | 2626635265 | 2626541554 | Bacteria | 7741902 |
| 174 | 2671835156 | 2671180195 | Bacteria | 9757215 |
| 175 | 2676200159 | 2675902999 | Bacteria | 9438463 |
| 176 | 2676486433 | 2675903059 | Bacteria | 8644972 |
| 177 | 2686535350 | 2684623035 | Bacteria | 8032739 |
| 178 | 2686542625 | 2684623036 | Bacteria | 5199090 |
| 179 | 2689960271 | 2687453737 | Bacteria | 11203906 |
| 180 | 2689990776 | 2687453743 | Bacteria | 8361025 |
| 181 | 2710602369 | 2710264753 | Bacteria | 5455564 |
| 182 | 2772642589 | 2772190715 | Bacteria | 6959372 |
| 183 | 2774844737 | 2773857921 | Bacteria | 9435764 |
| 184 | 2774853312 | 2773857922 | Bacteria | 9757215 |
| 185 | 2774864572 | 2773857924 | Bacteria | 5256821 |
| 186 | 2831937841 | 2831935698 | Bacteria | 5963223 |
| 187 | 2832006908 | 2832004796 | Bacteria | 6538017 |
| 188 | 2855671111 | 2855670206 | Bacteria | 7120389 |
| 189 | 2855682308 | 2855676851 | Bacteria | 7063653 |
| 190 | 2855689496 | 2855683550 | Bacteria | 7134265 |
| 191 | 2856861006 | 2856858025 | Bacteria | 7255264 |
| 192 | 2857294510 | 2857288857 | Bacteria | 7189066 |
| 193 | 2858850462 | 2858848962 | Bacteria | 6963058 |
| 194 | 2858871819 | 2858868258 | Bacteria | 7683772 |
| 195 | 2858884032 | 2858882152 | Bacteria | 7230291 |
| 196 | 2858889814 | 2858888857 | Bacteria | 7060307 |
| 197 | 2858900665 | 2858895516 | Bacteria | 7378898 |
| 198 | 2858903730 | 2858902515 | Bacteria | 7086037 |
| 199 | 2866070415 | 2866065130 | Bacteria | 6518152 |
| 200 | 2867304909 | 2867302475 | Bacteria | 7087181 |
| 201 | 2867315697 | 2867312974 | Bacteria | 7058875 |
| 202 | 2867323837 | 2867319477 | Bacteria | 7069771 |
| 203 | 2867508277 | 2867507094 | Bacteria | 6506033 |
| 204 | 2869054612 | 2869048445 | Bacteria | 6875584 |
| 205 | 2869062549 | 2869061728 | Bacteria | 7112407 |
| 206 | 2869073907 | 2869068681 | Bacteria | 7205615 |
| 207 | 2880493105 | 2880489317 | Bacteria | 7096270 |
| 208 | 2880499205 | 2880495981 | Bacteria | 7340502 |
| 209 | 2887482869 | 2887478801 | Bacteria | 8972725 |
| 210 | 2895887030 | 2895880812 | Bacteria | 11255272 |
| 211 | 2902587056 | 2902582711 | Bacteria | 6187705 |
| 212 | 2929221190 | 2929219909 | Bacteria | 6984360 |
| 213 | 2929227807 | 2929226422 | Bacteria | 7248583 |
| 214 | 2996222727 | 2996221748 | Bacteria | 6799777 |
| 215 | 637880930 | 637000116 | Bacteria | 5433628 |
| 216 | 649811757 | 649633069 | Bacteria | 6962533 |
| 217 | 8001781938 | 8001781756 | Bacteria | 9586736 |
| 218 | 8002775966 | 8002775197 | Bacteria | 10728764 |
| 219 | 8002790674 | 8002784119 | Bacteria | 9788632 |
| 220 | 8003833213 | 8003830390 | Bacteria | 6541657 |
| 221 | 8003876570 | 8003870546 | Bacteria | 7396674 |
| 222 | 8054709089 | 8054704163 | Bacteria | 7247792 |
| 223 | 8054730824 | 8054727385 | Bacteria | 7558670 |
| 224 | 8054736251 | 8054734606 | Bacteria | 6947278 |
| 225 | 8054919113 | 8054913762 | Bacteria | 7713009 |
| 226 | 8054924232 | 8054920844 | Bacteria | 7068637 |
| 227 | 8055162989 | 8055157932 | Bacteria | 6429399 |
| 228 | 8055414575 | 8055412473 | Bacteria | 6257500 |
| 229 | JGI25406J46586_10002817 | |||
| 230 | Ga0070658_10144173 | |||
| 231 | Ga0070683_100265933 | |||
| 232 | Ga0070682_100079589 | |||
| 233 | Ga0070660_100100694 | |||
| 234 | Ga0070661_100053840 | |||
| 235 | Ga0070668_100002069 | |||
| 236 | Ga0070668_100100301 | |||
| 237 | Ga0070669_100066043 | |||
| 238 | Ga0070667_100123418 | |||
| 239 | Ga0070713_100033429 | |||
| 240 | Ga0070713_100174399 | |||
| 241 | Ga0070679_100230642 | |||
| 242 | Ga0070684_100268781 | |||
| 243 | Ga0070665_100049880 | |||
| 244 | Ga0068857_100049044 | |||
| 245 | Ga0068859_100000643 | |||
| 246 | Ga0068864_100011086 | |||
| 247 | Ga0068858_100000003 | |||
| 248 | Ga0068858_100065721 | |||
| 249 | Ga0068860_100055769 | |||
| 250 | Ga0068862_100000110 | |||
| 251 | Ga0068862_100130343 | |||
| 252 | Ga0081540_1002066 | |||
| 253 | Ga0081540_1011249 | |||
| 254 | Ga0081539_10000613 | |||
| 255 | Ga0081539_10001544 | |||
| 256 | Ga0081539_10008411 | |||
| 257 | Ga0081539_10009503 | |||
| 258 | Ga0075364_10134168 | |||
| 259 | Ga0075428_100000717 | |||
| 260 | Ga0075428_100016824 | |||
| 261 | Ga0075430_100006229 | |||
| 262 | Ga0075430_100094952 | |||
| 263 | Ga0075431_100071062 | |||
| 264 | Ga0075429_100011645 | |||
| 265 | Ga0097620_100000643 | |||
| 266 | Ga0105251_10052636 | |||
| 267 | Ga0111539_10340914 | |||
| 268 | Ga0105245_10396183 | |||
| 269 | Ga0105247_10000014 | |||
| 270 | Ga0105247_10000296 | |||
| 271 | Ga0105247_10125881 | |||
| 272 | Ga0114129_10000007 | |||
| 273 | Ga0114129_10026879 | |||
| 274 | Ga0114129_10055033 | |||
| 275 | Ga0114129_10326406 | |||
| 276 | Ga0105248_10000038 | |||
| 277 | Ga0105248_10005304 | |||
| 278 | Ga0105248_10008292 | |||
| 279 | Ga0105239_10565410 | |||
| 280 | Ga0157378_10198036 | |||
| 281 | Ga0163163_10005892 | |||
| 282 | Ga0163163_10020091 | |||
| 283 | Ga0163163_10032718 | |||
| 284 | Ga0163163_10298193 | |||
| 285 | Ga0157379_10000800 | |||
| 286 | Ga0157379_10002987 | |||
| 287 | Ga0197907_10663270 | |||
| 288 | Ga0206354_11197936 | |||
| 289 | Ga0207710_10000020 | |||
| 290 | Ga0207710_10000031 | |||
| 291 | Ga0207707_10056746 | |||
| 292 | Ga0207693_10103969 | |||
| 293 | Ga0207660_10051113 | |||
| 294 | Ga0207657_10029730 | |||
| 295 | Ga0207687_10110343 | |||
| 296 | Ga0207700_10039014 | |||
| 297 | Ga0207711_10000152 | |||
| 298 | Ga0207711_10001989 | |||
| 299 | Ga0207661_10004513 | |||
| 300 | Ga0207668_10000508 | |||
| 301 | Ga0207703_10000006 | |||
| 302 | Ga0207703_10016604 | |||
| 303 | Ga0207676_10010535 | |||
| 304 | Ga0207676_10057988 | |||
| 305 | Ga0207674_10025466 | |||
| 306 | Ga0268265_10000066 | |||
| 307 | Ga0268264_10207047 | |||
| 308 | Ga0307517_10042290 | |||
| 309 | Ga0307515_10000045 | |||
| 310 | Ga0307515_10005558 | |||
| 311 | Ga0307515_10029340 | |||
| 312 | Ga0307512_10012959 | |||
| 313 | Ga0307512_10053225 | |||
| 314 | Ga0307513_10003731 | |||
| 315 | Ga0307513_10009153 | |||
| 316 | Ga0307513_10048024 | |||
| 317 | Ga0307408_100215322 | |||
| 318 | Ga0307508_10000774 | |||
| 319 | Ga0307516_10020069 | |||
| 320 | Ga0307405_10002914 | |||
| 321 | Ga0307405_10005869 | |||
| 322 | Ga0307413_10068347 | |||
| 323 | Ga0307410_10032303 | |||
| 324 | Ga0307410_10118716 | |||
| 325 | Ga0326468_10000205 | |||
| 326 | Ga0307406_10004361 | |||
| 327 | Ga0307407_10031998 | |||
| 328 | Ga0307409_100001105 | |||
| 329 | Ga0307409_100011497 | |||
| 330 | Ga0307409_100258570 | |||
| 331 | Ga0307416_100000814 | |||
| 332 | Ga0307415_100000231 | |||
| 333 | Ga0307415_100022619 | |||
| 334 | Ga0307507_10160858 | |||
| 335 | Ga0373951_0000004 | |||
| 336 | Ga0373942_0000490 | |||
| 337 | Ga0373935_0034678 | |||
| 338 | Ga0373937_0160837 | |||
| 339 | Ga0395899_0043109 | |||
| 340 | Ga0395900_0008291 | |||
| 341 | Ga0395905_0089485 | |||
| 342 | Ga0395901_0017703 | |||
| 343 | Ga0451793_0506242 | |||
| 344 | Ga0451853_4026905 | |||
| 345 | Ga0495606_0002403 | |||
| 346 | Ga0495632_0027255 | |||
| 347 | Ga0495648_0037503 | |||
| 348 | Ga0495667_0152967 | |||
| 349 | Ga0495668_0000566 | |||
| 350 | Ga0495625_0001428 | |||
| 351 | Ga0495674_0309820 | |||
| 352 | Ga0495626_0000129 | |||
| 353 | Ga0496103_0188098 | |||
| 354 | Ga0496104_0109992 | |||
| 355 | Ga0496105_0007400 | |||
| 356 | Ga0496108_0000048 | |||
| 357 | Ga0496108_0003085 | |||
| 358 | Ga0496111_0091683 | |||
| 359 | Ga0496112_0006767 | |||
| 360 | Ga0496112_0115540 | |||
| 361 | Ga0496113_0038324 | |||
| 362 | Ga0496116_0000665 | |||
| 363 | Ga0496117_0046563 | |||
| 364 | Ga0496118_0000900 | |||
| 365 | Ga0496118_0004221 | |||
| 366 | Ga0496119_0000405 | |||
| 367 | Ga0496119_0013365 | |||
| 368 | Ga0496120_0000401 | |||
| 369 | Ga0496121_0015703 | |||
| 370 | Ga0496121_0019268 | |||
| 371 | Ga0501047_0006079 | |||
| 372 | nmdc:mga05p37_4429_c1 | |||
| 373 | nmdc:mga05p37_52835_c1 | |||
| 374 | nmdc:mga05p37_697314_c1 | |||
| 375 | nmdc:mga05p37_71115_c1 | |||
| 376 | nmdc:mga05p37_806_c1 | |||
| 377 | nmdc:mga0qj67_13876_c1 | |||
| 378 | nmdc:mga0qj67_225_c1 | |||
| 379 | nmdc:mga0qj67_367947_c1 | |||
| 380 | nmdc:mga06r32_320001_c1 | |||
| 381 | Ga0500650_0084952 | |||
| 382 | Ga0500569_017296 | |||
| 383 | Ga0500616_0100044 | |||
| 384 | 8003859088 | |||
| 385 | 2501945320 | |||
| 386 | 2508677392 | |||
| 387 | 2515496062 | |||
| 388 | 2515719834 | |||
| 389 | 2515757900 | |||
| 390 | 2516082384 | |||
| 391 | 2516090326 | |||
| 392 | 2517760410 | |||
| 393 | 2528202943 | |||
| 394 | 2528213380 | |||
| 395 | 2546947819 | |||
| 396 | 2579749566 | |||
| 397 | 2579855710 | |||
| 398 | 2619857486 | |||
| 399 | 2620348212 | |||
| 400 | 2623587172 | |||
| 401 | 2626635265 | |||
| 402 | 2671835156 | |||
| 403 | 2676200159 | |||
| 404 | 2676486433 | |||
| 405 | 2686535350 | |||
| 406 | 2686542625 | |||
| 407 | 2689960271 | |||
| 408 | 2689990776 | |||
| 409 | 2710602369 | |||
| 410 | 2772642589 | |||
| 411 | 2774844737 | |||
| 412 | 2774853312 | |||
| 413 | 2774864572 | |||
| 414 | 2831937841 | |||
| 415 | 2832006908 | |||
| 416 | 2855671111 | |||
| 417 | 2855682308 | |||
| 418 | 2855689496 | |||
| 419 | 2856861006 | |||
| 420 | 2857294510 | |||
| 421 | 2858850462 | |||
| 422 | 2858871819 | |||
| 423 | 2858884032 | |||
| 424 | 2858889814 | |||
| 425 | 2858900665 | |||
| 426 | 2858903730 | |||
| 427 | 2866070415 | |||
| 428 | 2867304909 | |||
| 429 | 2867315697 | |||
| 430 | 2867323837 | |||
| 431 | 2867508277 | |||
| 432 | 2869054612 | |||
| 433 | 2869062549 | |||
| 434 | 2869073907 | |||
| 435 | 2880493105 | |||
| 436 | 2880499205 | |||
| 437 | 2887482869 | |||
| 438 | 2895887030 | |||
| 439 | 2902587056 | |||
| 440 | 2929221190 | |||
| 441 | 2929227807 | |||
| 442 | 2996222727 | |||
| 443 | 637880930 | |||
| 444 | 649811757 | |||
| 445 | 8001781938 | |||
| 446 | 8002775966 | |||
| 447 | 8002790674 | |||
| 448 | 8003833213 | |||
| 449 | 8003876570 | |||
| 450 | 8054709089 | |||
| 451 | 8054730824 | |||
| 452 | 8054736251 | |||
| 453 | 8054919113 | |||
| 454 | 8054924232 | |||
| 455 | 8055162989 | |||
| 456 | 8055414575 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3se7-assembly3.cif.gz_F | ancient vana | 0.9147 | 5 | 359 |
| 3lwb-assembly1.cif.gz_B | crystal structure of apo d-alanine:d-alanine ligase (ddl) from mycobacterium tuberculosis | 0.9137 | 6 | 366 |
| 6u1h-assembly1.cif.gz_B | thermus thermophilus d-alanine-d-alanine ligase in complex with adp, phosphate, mg2+ and k+ | 0.9123 | 8 | 361 |
| 3lwb-assembly1.cif.gz_B | crystal structure of apo d-alanine:d-alanine ligase (ddl) from mycobacterium tuberculosis | 0.9107 | 6 | 366 |
| 3se7-assembly3.cif.gz_F | ancient vana | 0.9093 | 5 | 359 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3lwbB03 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain | 0.9884 | 163 | 227 | 3.30.1490.20 |
| 3lwbB03 | Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain | 0.9593 | 163 | 227 | 3.30.1490.20 |
| af_P9WP31_140_368_3.40.50.20 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9557 | 136 | 361 | 3.40.50.20 |
| 3q1kB02 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9474 | 136 | 361 | 3.30.470.20 |
| af_P9WP31_140_368_3.40.50.20 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9395 | 136 | 361 | 3.40.50.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7X6VCQ7-F1-model_v4 | ATP-grasp domain-containing protein | 0.9721 | 200 | 361 |
GO:0005524
GO:0005829 GO:0008360 GO:0008716 GO:0009252 GO:0046872 |
| AF-A0A1F2XYX3-F1-model_v4 | ATP-grasp domain-containing protein | 0.9717 | 124 | 361 |
GO:0005524
GO:0005829 GO:0008360 GO:0008716 GO:0009252 GO:0046872 GO:0071555 |
| AF-A0A662CEI9-F1-model_v4 | D-alanine--D-alanine ligase | 0.9669 | 180 | 359 |
GO:0005524
GO:0005737 GO:0008360 GO:0008716 GO:0009252 GO:0046872 |
| AF-A0A351KA51-F1-model_v4 | ATP-grasp domain-containing protein | 0.9664 | 179 | 361 |
GO:0005524
GO:0005829 GO:0008360 GO:0008716 GO:0009252 GO:0046872 |
| AF-A0A536SW86-F1-model_v4 | D-alanine--D-alanine ligase (EC 6.3.2.4) | 0.9661 | 200 | 361 |
GO:0005524
GO:0005829 GO:0008360 GO:0008716 GO:0009252 GO:0046872 |