F341458

General Info

Members Datasets Scaffolds Average Seq Length
228 147 226 200

Family's Representative Sequence

Representative Sequence 3300053087|Ga0500643_076482|Ga0500643_076482_208_885
Length 225
Sequence VGDRAHRHRAGGDAAREILVEVEFDMMTALIVSQIVSWVLLLGVTLALLAVARQVGVLHERVAPVGALTPKQGPAVGSAAPRLLVTTMEGRALEIGGALRPNARRILFFVSSACPICKKLIPFVLSFAKAEGLELIFAGDDEAAIQARLVTAYGLDGFDFVNDGQLGRAFAVDKLPHAVLLGHDGRIIARGLVNSREHLESMVVADETGLPSVQDYLKGRLAERA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
50 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
89 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
90 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
91 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
94 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
95 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
101 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
102 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
103 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
104 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
105 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
106 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
107 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
108 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
109 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
110 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
111 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
112 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
113 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
114 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
117 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
118 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
121 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
122 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
131 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
132 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
133 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
134 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
135 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
136 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
137 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
138 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
141 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
142 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
143 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
144 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
145 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
146 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
147 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0
Isolates 1.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.02
Nodule 0
Rhizoplane 0.44
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 9.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2866031 2162886007 Bacteria 47061
2 JGI24739J22299_10002951 3300001989 Bacteria 6521
3 JGI24735J21928_10010449 3300002067 Bacteria 2959
4 JGI24738J21930_10007074 3300002075 Unclassified 2606
5 JGI25406J46586_10001788 3300003203 Bacteria 10100
6 rootH1_10017161 3300003316 Bacteria 5089
7 rootH1_10017161 3300003323 Bacteria 8139
8 rootH2_10200980 3300003320 Bacteria 2296
9 rootL2_10058431 3300003322 Unclassified 1920
10 rootH1_10025105 3300003323 Bacteria 2115
11 rootH1_10237772 3300003323 Bacteria 4422
12 rootH1_10347671 3300003323 Bacteria 1232
13 rootH1_10383752 3300003323 Bacteria 3052
14 Ga0065704_10000192 3300005289 Bacteria 216848
15 Ga0070660_100000103 3300005339 Bacteria 52286
16 Ga0070661_100038819 3300005344 Bacteria 3467
17 Ga0070667_100324782 3300005367 Bacteria 1389
18 Ga0070663_100277233 3300005455 Bacteria 1335
19 Ga0070662_100007830 3300005457 Bacteria 6939
20 Ga0070681_10276920 3300005458 Bacteria 1589
21 Ga0070698_100220711 3300005471 Bacteria 1829
22 Ga0070697_100407498 3300005536 Unclassified 1180
23 Ga0068853_100379742 3300005539 Bacteria 1319
24 Ga0070665_100001517 3300005548 Bacteria 26907
25 Ga0070665_100006736 3300005548 Bacteria 11679
26 Ga0070665_100411726 3300005548 Bacteria 1360
27 Ga0070665_100490093 3300005548 Bacteria 1240
28 Ga0070665_100608832 3300005548 Bacteria 1105
29 Ga0068855_100000398 3300005563 Bacteria 53640
30 Ga0068855_100008265 3300005563 Bacteria 12582
31 Ga0068855_100053428 3300005563 Bacteria 4753
32 Ga0068855_100079456 3300005563 Bacteria 3804
33 Ga0070664_100135407 3300005564 Bacteria 2166
34 Ga0068857_100201122 3300005577 Bacteria 1816
35 Ga0068857_101200573 3300005577 Bacteria 734
36 Ga0068852_100125906 3300005616 Bacteria 2353
37 Ga0068852_100292971 3300005616 Bacteria 1573
38 Ga0068859_100003472 3300005617 Bacteria 16033
39 Ga0068859_100063379 3300005617 Bacteria 3728
40 Ga0068859_100190019 3300005617 Unclassified 2138
41 Ga0068861_100000016 3300005719 Bacteria 79478
42 Ga0068861_100039704 3300005719 Bacteria 3515
43 Ga0068861_100062230 3300005719 Bacteria 2866
44 Ga0068863_100002192 3300005841 Bacteria 19382
45 Ga0068860_100004334 3300005843 Bacteria 14504
46 Ga0068862_100004012 3300005844 Bacteria 12481
47 Ga0068862_100115157 3300005844 Bacteria 2364
48 Ga0068862_100474752 3300005844 Bacteria 1183
49 Ga0068862_100510777 3300005844 Bacteria 1142
50 Ga0081539_10000001 3300005985 Bacteria 808331
51 Ga0068871_100772170 3300006358 Bacteria 884
52 Ga0068865_100891102 3300006881 Bacteria 773
53 Ga0097620_100003472 3300006931 Bacteria 16033
54 Ga0097620_100045348 3300006931 Bacteria 4417
55 Ga0097620_100063378 3300006931 Bacteria 3728
56 Ga0097620_100189999 3300006931 Unclassified 2138
57 Ga0105240_10009338 3300009093 Bacteria 13900
58 Ga0105240_10010352 3300009093 Bacteria 13121
59 Ga0105240_10018868 3300009093 Bacteria 9234
60 Ga0105240_10041435 3300009093 Bacteria 5877
61 Ga0105240_10074533 3300009093 Plasmid 4189
62 Ga0105240_10321927 3300009093 Bacteria 1762
63 Ga0105240_10451294 3300009093 Bacteria 1439
64 Ga0105241_10793567 3300009174 Bacteria 872
65 Ga0105248_10012758 3300009177 Bacteria 9270
66 Ga0105248_11684203 3300009177 Bacteria 719
67 Ga0105237_10007387 3300009545 Bacteria 12034
68 Ga0105237_10056750 3300009545 Bacteria 3919
69 Ga0105237_10081034 3300009545 Bacteria 3236
70 Ga0105238_10247452 3300009551 Bacteria 1760
71 Ga0105249_10000742 3300009553 Bacteria 29384
72 Ga0105249_10005389 3300009553 Bacteria 11041
73 Ga0105239_10011156 3300010375 Bacteria 10029
74 Ga0105239_10055233 3300010375 Bacteria 4355
75 Ga0105239_10946314 3300010375 Unclassified 989
76 Ga0157373_10344531 3300013100 Bacteria 1062
77 Ga0157371_10028411 3300013102 Bacteria 4051
78 Ga0157370_10003213 3300013104 Bacteria 19314
79 Ga0157370_10887966 3300013104 Bacteria 809
80 Ga0157370_10952845 3300013104 Bacteria 778
81 Ga0157369_10001506 3300013105 Bacteria 28594
82 Ga0157369_10003807 3300013105 Bacteria 17914
83 Ga0157369_10104722 3300013105 Bacteria 3012
84 Ga0157372_10103937 3300013307 Bacteria 3246
85 Ga0163163_12336709 3300014325 Bacteria 593
86 Ga0157379_10146250 3300014968 Bacteria 2131
87 Ga0213872_10049655 3300021361 Bacteria 1905
88 Ga0213872_10167301 3300021361 Bacteria 954
89 Ga0213871_10036814 3300021441 Unclassified 1300
90 Ga0207647_10077964 3300025904 Bacteria 1991
91 Ga0207707_10053932 3300025912 Bacteria 3500
92 Ga0207695_10084946 3300025913 Bacteria 3194
93 Ga0207695_10100178 3300025913 Bacteria 2894
94 Ga0207695_10253163 3300025913 Unclassified 1660
95 Ga0207671_10373863 3300025914 Unclassified 1132
96 Ga0207671_10781059 3300025914 Unclassified 758
97 Ga0207657_10000243 3300025919 Bacteria 57852
98 Ga0207681_10010349 3300025923 Bacteria 5708
99 Ga0207694_10021309 3300025924 Unclassified 4911
100 Ga0207700_10331805 3300025928 Bacteria 1320
101 Ga0207664_10165365 3300025929 Bacteria 1890
102 Ga0207706_10016362 3300025933 Bacteria 6696
103 Ga0207709_10129723 3300025935 Bacteria 1716
104 Ga0207711_10016031 3300025941 Bacteria 6217
105 Ga0207711_11143757 3300025941 Bacteria 719
106 Ga0207667_10000948 3300025949 Bacteria 37006
107 Ga0207667_10006747 3300025949 Bacteria 13858
108 Ga0207667_10087388 3300025949 Bacteria 3225
109 Ga0207667_10175190 3300025949 Bacteria 2204
110 Ga0207712_10000012 3300025961 Bacteria 392363
111 Ga0207712_10006084 3300025961 Bacteria 7615
112 Ga0207668_10001062 3300025972 Bacteria 16385
113 Ga0207658_10303543 3300025986 Bacteria 1376
114 Ga0207677_10489297 3300026023 Bacteria 1061
115 Ga0207639_10031281 3300026041 Bacteria 3911
116 Ga0207639_11066759 3300026041 Unclassified 757
117 Ga0207702_10242037 3300026078 Bacteria 1691
118 Ga0207641_10002023 3300026088 Bacteria 19330
119 Ga0207674_10579683 3300026116 Bacteria 1084
120 Ga0207674_10679186 3300026116 Unclassified 994
121 Ga0207675_100000015 3300026118 Bacteria 126545
122 Ga0207675_100060244 3300026118 Bacteria 3544
123 Ga0207675_100132684 3300026118 Bacteria 2362
124 Ga0207698_10061650 3300026142 Bacteria 2924
125 Ga0268266_10004737 3300028379 Bacteria 12932
126 Ga0268266_10009393 3300028379 Bacteria 8616
127 Ga0268266_10119419 3300028379 Bacteria 2344
128 Ga0268266_11009357 3300028379 Bacteria 805
129 Ga0268265_10164156 3300028380 Bacteria 1891
130 Ga0268265_10259309 3300028380 Bacteria 1544
131 Ga0268265_10630416 3300028380 Unclassified 1028
132 Ga0268264_10002895 3300028381 Bacteria 14925
133 Ga0268264_10283244 3300028381 Bacteria 1553
134 Ga0265339_10007465 3300031249 Bacteria 7066
135 Ga0307513_10162455 3300031456 Bacteria 2123
136 Ga0307509_10000004 3300031507 Bacteria 535507
137 Ga0307408_100000746 3300031548 Bacteria 26310
138 Ga0307408_100197097 3300031548 Bacteria 1627
139 Ga0265313_10019235 3300031595 Bacteria 3809
140 Ga0307406_10514347 3300031901 Unclassified 973
141 Ga0307412_10006444 3300031911 Bacteria 6634
142 Ga0307414_10001286 3300032004 Bacteria 12961
143 Ga0307510_10003287 3300033180 Bacteria 18801
144 Ga0373937_0541051 3300036401 Bacteria 1106
145 Ga0373925_0564849 3300037068 Bacteria 936
146 Ga0436360_0857087 3300039438 Bacteria 1152
147 Ga0436361_0065571 3300039447 Bacteria 16897
148 Ga0436361_0113636 3300039447 Bacteria 1396
149 Ga0436361_0205215 3300039447 Bacteria 60678
150 Ga0436361_0242185 3300039447 Bacteria 13113
151 Ga0436361_0953019 3300039447 Bacteria 849
152 Ga0436363_1251294 3300039450 Bacteria 2380
153 Ga0466969_0001331 3300044656 Bacteria 13339
154 Ga0466966_0035169 3300044684 Bacteria 3239
155 Ga0466964_0020549 3300044706 Bacteria 2544
156 Ga0466971_0041242 3300044719 Bacteria 2073
157 Ga0466968_0052162 3300044735 Bacteria 1749
158 Ga0466970_0033965 3300044765 Bacteria 2698
159 Ga0466960_0081753 3300044901 Bacteria 1629
160 Ga0466959_0012417 3300045049 Bacteria 6154
161 Ga0466959_0060221 3300045049 Bacteria 2763
162 Ga0466959_0119698 3300045049 Unclassified 1873
163 Ga0466959_0163417 3300045049 Bacteria 1564
164 Ga0466959_0367256 3300045049 Bacteria 980
165 Ga0466958_0000700 3300045836 Bacteria 14605
166 Ga0495627_015488 3300046453 Bacteria 2631
167 Ga0495627_018920 3300046453 Bacteria 2315
168 Ga0495638_0043359 3300046460 Bacteria 2838
169 Ga0495584_0189924 3300046491 Bacteria 1044
170 Ga0495583_0000286 3300046506 Bacteria 80417
171 Ga0495610_0000053 3300046512 Bacteria 142545
172 Ga0495616_0127874 3300046513 Bacteria 1167
173 Ga0495632_0000006 3300046519 Bacteria 345883
174 Ga0495637_0001883 3300046520 Bacteria 11976
175 Ga0495643_0000031 3300046522 Bacteria 257820
176 Ga0495648_0014246 3300046524 Bacteria 5831
177 Ga0495663_0000008 3300046525 Bacteria 260614
178 Ga0495654_0053800 3300046530 Bacteria 1955
179 Ga0495654_0069979 3300046530 Bacteria 1665
180 Ga0495597_0051782 3300046542 Unclassified 1809
181 Ga0495633_0000190 3300046558 Bacteria 79967
182 Ga0495633_0012565 3300046558 Bacteria 4494
183 Ga0495633_0021573 3300046558 Bacteria 3220
184 Ga0495668_0013874 3300046616 Bacteria 4739
185 Ga0495625_0012783 3300046660 Bacteria 6788
186 Ga0495659_0271083 3300046664 Bacteria 711
187 Ga0495661_0008761 3300046665 Bacteria 6981
188 Ga0495661_0061453 3300046665 Bacteria 2230
189 Ga0495647_0157470 3300046681 Bacteria 977
190 Ga0495670_0006325 3300046691 Bacteria 5816
191 Ga0495671_0000021 3300046692 Bacteria 257820
192 Ga0495671_0023407 3300046692 Bacteria 3227
193 Ga0495672_0049131 3300047320 Bacteria 2498
194 Ga0495681_0000015 3300047470 Bacteria 183538
195 Ga0495681_0023307 3300047470 Bacteria 3292
196 Ga0495686_0000057 3300047472 Bacteria 250088
197 Ga0495686_0027313 3300047472 Bacteria 3728
198 Ga0495686_0040201 3300047472 Bacteria 2984
199 Ga0495686_0095149 3300047472 Bacteria 1804
200 Ga0496115_0192722 3300048918 Unclassified 1684
201 Ga0496117_0011345 3300048920 Bacteria 7987
202 Ga0496118_0000743 3300048921 Bacteria 52692
203 Ga0496124_0108381 3300048927 Bacteria 2240
204 Ga0496125_0161866 3300048928 Bacteria 1519
205 Ga0496126_0011642 3300048929 Bacteria 9079
206 Ga0496126_0012547 3300048929 Bacteria 8674
207 Ga0496126_0031466 3300048929 Bacteria 5013
208 Ga0496126_0164658 3300048929 Unclassified 1893
209 Ga0495682_0001453 3300049460 Bacteria 12775
210 Ga0500643_000021 3300053087 Bacteria 284326
211 Ga0500643_076482 3300053087 Bacteria 924
212 Ga0500641_0117392 3300053096 Bacteria 1146
213 Ga0500555_000119 3300053103 Bacteria 37588
214 Ga0500562_030353 3300053108 Bacteria 1424
215 Ga0500594_0006317 3300053118 Bacteria 2658
216 Ga0500559_0004877 3300053136 Bacteria 6257
217 Ga0500590_000261 3300053148 Bacteria 16483
218 Ga0500604_0013487 3300053151 Bacteria 2215
219 Ga0500616_0003093 3300053153 Bacteria 13048
220 Ga0500616_0003510 3300053153 Bacteria 11908
221 Ga0500627_0003255 3300053158 Bacteria 4995
222 Ga0500636_0116694 3300053177 Bacteria 1502
223 Ga0500637_0008046 3300053178 Bacteria 5299
224 Ga0500596_042850 3300053735 Unclassified 725
225 Ga0500661_000119 3300055283 Bacteria 12937
226 Ga0466962_0018657 3300061719 Bacteria 3336

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014325 Ga0163163_12336709 Ga0163163_123367091 169
2 3300025928 Ga0207700_10331805 Ga0207700_103318052 174
3 3300046491 Ga0495584_0189924 Ga0495584_0189924_166_792 178
4 3300003323 rootH1_10237772 rootH1_102377723 181
5 3300005563 Ga0068855_100053428 Ga0068855_1000534287 183
6 3300009093 Ga0105240_10018868 Ga0105240_100188687 183
7 3300013104 Ga0157370_10887966 Ga0157370_108879662 183
8 3300013105 Ga0157369_10001506 Ga0157369_1000150615 183
9 3300013307 Ga0157372_10103937 Ga0157372_101039372 183
10 3300025929 Ga0207664_10165365 Ga0207664_101653652 183
11 3300025949 Ga0207667_10175190 Ga0207667_101751902 183
12 3300005577 Ga0068857_101200573 Ga0068857_1012005731 188
13 3300005617 Ga0068859_100190019 Ga0068859_1001900193 188
14 3300005844 Ga0068862_100474752 Ga0068862_1004747521 188
15 3300006931 Ga0097620_100189999 Ga0097620_1001899993 188
16 3300026116 Ga0207674_10579683 Ga0207674_105796831 188
17 3300028380 Ga0268265_10164156 Ga0268265_101641562 188
18 3300033180 Ga0307510_10003287 Ga0307510_1000328710 188
19 3300053096 Ga0500641_0117392 Ga0500641_0117392_270_869 189
20 3300003203 JGI25406J46586_10001788 JGI25406J46586_100017884 191
21 3300005985 Ga0081539_10000001 Ga0081539_10000001667 191
22 3300005719 Ga0068861_100039704 Ga0068861_1000397043 192
23 3300026118 Ga0207675_100132684 Ga0207675_1001326843 192
24 3300021441 Ga0213871_10036814 Ga0213871_100368142 194
25 3300003323 rootH1_10347671 rootH1_103476712 195
26 3300005367 Ga0070667_100324782 Ga0070667_1003247822 195
27 3300005458 Ga0070681_10276920 Ga0070681_102769202 195
28 3300005563 Ga0068855_100000398 Ga0068855_10000039852 195
29 3300005616 Ga0068852_100292971 Ga0068852_1002929712 195
30 3300005844 Ga0068862_100004012 Ga0068862_1000040127 195
31 3300009093 Ga0105240_10009338 Ga0105240_1000933814 195
32 3300009177 Ga0105248_10012758 Ga0105248_100127587 195
33 3300009553 Ga0105249_10000742 Ga0105249_1000074226 195
34 3300013104 Ga0157370_10952845 Ga0157370_109528451 195
35 3300025912 Ga0207707_10053932 Ga0207707_100539324 195
36 3300025913 Ga0207695_10084946 Ga0207695_100849464 195
37 3300025923 Ga0207681_10010349 Ga0207681_100103497 195
38 3300025941 Ga0207711_10016031 Ga0207711_100160313 195
39 3300025949 Ga0207667_10000948 Ga0207667_1000094832 195
40 3300025972 Ga0207668_10001062 Ga0207668_1000106210 195
41 3300025986 Ga0207658_10303543 Ga0207658_103035432 195
42 3300026041 Ga0207639_10031281 Ga0207639_100312812 195
43 3300026078 Ga0207702_10242037 Ga0207702_102420371 195
44 3300028380 Ga0268265_10259309 Ga0268265_102593093 195
45 3300048920 Ga0496117_0011345 Ga0496117_0011345_4469_5071 195
46 3300048921 Ga0496118_0000743 Ga0496118_0000743_49791_50393 195
47 3300053177 Ga0500636_0116694 Ga0500636_0116694_47_634 195
48 iso_pu_bacteria 2919138771 2919142861 195
49 3300003323 rootH1_10383752 rootH1_103837522 196
50 3300005548 Ga0070665_100608832 Ga0070665_1006088322 196
51 3300028379 Ga0268266_10119419 Ga0268266_101194192 196
52 3300044656 Ga0466969_0001331 Ga0466969_0001331_3510_4103 196
53 3300044684 Ga0466966_0035169 Ga0466966_0035169_1174_1767 196
54 3300044706 Ga0466964_0020549 Ga0466964_0020549_1361_1954 196
55 3300044719 Ga0466971_0041242 Ga0466971_0041242_1390_1983 196
56 3300044735 Ga0466968_0052162 Ga0466968_0052162_701_1294 196
57 3300044765 Ga0466970_0033965 Ga0466970_0033965_1831_2424 196
58 3300045049 Ga0466959_0012417 Ga0466959_0012417_540_1133 196
59 3300045049 Ga0466959_0119698 Ga0466959_0119698_442_1035 196
60 3300061719 Ga0466962_0018657 Ga0466962_0018657_582_1175 196
61 3300003316 rootH1_10017161 rootH1_100171611 197
62 3300003322 rootL2_10058431 rootL2_100584312 197
63 3300003323 rootH1_10025105 rootH1_100251052 197
64 3300005339 Ga0070660_100000103 Ga0070660_10000010331 197
65 3300005471 Ga0070698_100220711 Ga0070698_1002207112 197
66 3300005536 Ga0070697_100407498 Ga0070697_1004074982 197
67 3300005563 Ga0068855_100079456 Ga0068855_1000794564 197
68 3300009093 Ga0105240_10010352 Ga0105240_100103529 197
69 3300009545 Ga0105237_10007387 Ga0105237_1000738714 197
70 3300009545 Ga0105237_10081034 Ga0105237_100810342 197
71 3300010375 Ga0105239_10055233 Ga0105239_100552334 197
72 3300013105 Ga0157369_10104722 Ga0157369_101047225 197
73 3300025913 Ga0207695_10100178 Ga0207695_101001784 197
74 3300025914 Ga0207671_10781059 Ga0207671_107810591 197
75 3300025919 Ga0207657_10000243 Ga0207657_1000024336 197
76 3300025949 Ga0207667_10087388 Ga0207667_100873883 197
77 3300026041 Ga0207639_11066759 Ga0207639_110667592 197
78 3300031548 Ga0307408_100197097 Ga0307408_1001970973 197
79 3300031901 Ga0307406_10514347 Ga0307406_105143472 197
80 3300032004 Ga0307414_10001286 Ga0307414_100012869 197
81 3300046542 Ga0495597_0051782 Ga0495597_0051782_944_1549 197
82 3300046616 Ga0495668_0013874 Ga0495668_0013874_47_652 197
83 3300053735 Ga0500596_042850 Ga0500596_042850_34_651 197
84 3300005548 Ga0070665_100001517 Ga0070665_10000151711 198
85 3300005548 Ga0070665_100411726 Ga0070665_1004117262 198
86 3300009093 Ga0105240_10451294 Ga0105240_104512943 198
87 3300009545 Ga0105237_10056750 Ga0105237_100567504 198
88 3300028379 Ga0268266_10004737 Ga0268266_1000473710 198
89 3300031507 Ga0307509_10000004 Ga0307509_10000004314 198
90 3300037068 Ga0373925_0564849 Ga0373925_0564849_145_744 198
91 3300039447 Ga0436361_0953019 Ga0436361_0953019_126_722 198
92 3300046660 Ga0495625_0012783 Ga0495625_0012783_1621_2220 198
93 3300048929 Ga0496126_0011642 Ga0496126_0011642_3629_4228 198
94 3300053153 Ga0500616_0003093 Ga0500616_0003093_12243_12845 198
95 3300001989 JGI24739J22299_10002951 JGI24739J22299_100029512 199
96 3300002067 JGI24735J21928_10010449 JGI24735J21928_100104491 199
97 3300002075 JGI24738J21930_10007074 JGI24738J21930_100070741 199
98 3300005344 Ga0070661_100038819 Ga0070661_1000388192 199
99 3300005455 Ga0070663_100277233 Ga0070663_1002772332 199
100 3300005457 Ga0070662_100007830 Ga0070662_1000078306 199
101 3300005539 Ga0068853_100379742 Ga0068853_1003797422 199
102 3300005563 Ga0068855_100008265 Ga0068855_1000082653 199
103 3300005564 Ga0070664_100135407 Ga0070664_1001354074 199
104 3300005577 Ga0068857_100201122 Ga0068857_1002011222 199
105 3300005617 Ga0068859_100003472 Ga0068859_1000034724 199
106 3300005617 Ga0068859_100063379 Ga0068859_1000633793 199
107 3300005719 Ga0068861_100000016 Ga0068861_1000000164 199
108 3300005719 Ga0068861_100062230 Ga0068861_1000622304 199
109 3300005844 Ga0068862_100115157 Ga0068862_1001151575 199
110 3300005844 Ga0068862_100510777 Ga0068862_1005107772 199
111 3300006881 Ga0068865_100891102 Ga0068865_1008911022 199
112 3300006931 Ga0097620_100003472 Ga0097620_1000034724 199
113 3300006931 Ga0097620_100063378 Ga0097620_1000633783 199
114 3300009093 Ga0105240_10321927 Ga0105240_103219273 199
115 3300009177 Ga0105248_11684203 Ga0105248_116842031 199
116 3300009551 Ga0105238_10247452 Ga0105238_102474522 199
117 3300009553 Ga0105249_10005389 Ga0105249_100053894 199
118 3300010375 Ga0105239_10011156 Ga0105239_100111565 199
119 3300010375 Ga0105239_10946314 Ga0105239_109463142 199
120 3300013102 Ga0157371_10028411 Ga0157371_100284114 199
121 3300013104 Ga0157370_10003213 Ga0157370_1000321311 199
122 3300013105 Ga0157369_10003807 Ga0157369_100038078 199
123 3300014968 Ga0157379_10146250 Ga0157379_101462503 199
124 3300021361 Ga0213872_10049655 Ga0213872_100496552 199
125 3300021361 Ga0213872_10167301 Ga0213872_101673011 199
126 3300025904 Ga0207647_10077964 Ga0207647_100779643 199
127 3300025913 Ga0207695_10253163 Ga0207695_102531633 199
128 3300025924 Ga0207694_10021309 Ga0207694_100213095 199
129 3300025933 Ga0207706_10016362 Ga0207706_100163626 199
130 3300025935 Ga0207709_10129723 Ga0207709_101297232 199
131 3300025941 Ga0207711_11143757 Ga0207711_111437571 199
132 3300025949 Ga0207667_10006747 Ga0207667_100067477 199
133 3300025961 Ga0207712_10006084 Ga0207712_100060844 199
134 3300026023 Ga0207677_10489297 Ga0207677_104892972 199
135 3300026116 Ga0207674_10679186 Ga0207674_106791862 199
136 3300026118 Ga0207675_100000015 Ga0207675_100000015106 199
137 3300026118 Ga0207675_100060244 Ga0207675_1000602444 199
138 3300026142 Ga0207698_10061650 Ga0207698_100616503 199
139 3300028380 Ga0268265_10630416 Ga0268265_106304162 199
140 3300028381 Ga0268264_10283244 Ga0268264_102832442 199
141 3300031249 Ga0265339_10007465 Ga0265339_100074654 199
142 3300031548 Ga0307408_100000746 Ga0307408_10000074615 199
143 3300031595 Ga0265313_10019235 Ga0265313_100192352 199
144 3300031911 Ga0307412_10006444 Ga0307412_100064446 199
145 3300036401 Ga0373937_0541051 Ga0373937_0541051_362_961 199
146 3300039447 Ga0436361_0065571 Ga0436361_0065571_1853_2452 199
147 3300039447 Ga0436361_0113636 Ga0436361_0113636_118_717 199
148 3300039447 Ga0436361_0205215 Ga0436361_0205215_6410_7009 199
149 3300039447 Ga0436361_0242185 Ga0436361_0242185_1807_2406 199
150 3300044901 Ga0466960_0081753 Ga0466960_0081753_385_993 199
151 3300045049 Ga0466959_0060221 Ga0466959_0060221_1057_1656 199
152 3300045836 Ga0466958_0000700 Ga0466958_0000700_187_786 199
153 3300046681 Ga0495647_0157470 Ga0495647_0157470_70_669 199
154 iso_pu_bacteria 641228493 641334235 199
155 iso_pu_bacteria 643348555 643391863 199
156 2162886007 SwRhRL2b_contig_2866031 SwRhRL2b_0418.00003920 200
157 3300003320 rootH2_10200980 rootH2_102009803 200
158 3300005289 Ga0065704_10000192 Ga0065704_1000019252 200
159 3300005548 Ga0070665_100006736 Ga0070665_1000067364 200
160 3300005548 Ga0070665_100490093 Ga0070665_1004900932 200
161 3300005616 Ga0068852_100125906 Ga0068852_1001259062 200
162 3300005841 Ga0068863_100002192 Ga0068863_1000021925 200
163 3300005843 Ga0068860_100004334 Ga0068860_1000043349 200
164 3300006358 Ga0068871_100772170 Ga0068871_1007721702 200
165 3300006931 Ga0097620_100045348 Ga0097620_1000453484 200
166 3300009093 Ga0105240_10041435 Ga0105240_100414355 200
167 3300009093 Ga0105240_10074533 Ga0105240_100745335 200
168 3300009174 Ga0105241_10793567 Ga0105241_107935671 200
169 3300013100 Ga0157373_10344531 Ga0157373_103445312 200
170 3300025914 Ga0207671_10373863 Ga0207671_103738631 200
171 3300025961 Ga0207712_10000012 Ga0207712_1000001277 200
172 3300026088 Ga0207641_10002023 Ga0207641_1000202316 200
173 3300028379 Ga0268266_10009393 Ga0268266_100093939 200
174 3300028379 Ga0268266_11009357 Ga0268266_110093572 200
175 3300028381 Ga0268264_10002895 Ga0268264_100028959 200
176 3300031456 Ga0307513_10162455 Ga0307513_101624553 200
177 3300039438 Ga0436360_0857087 Ga0436360_0857087_205_807 200
178 3300039450 Ga0436363_1251294 Ga0436363_1251294_1628_2230 200
179 3300045049 Ga0466959_0163417 Ga0466959_0163417_270_887 200
180 3300045049 Ga0466959_0367256 Ga0466959_0367256_149_766 200
181 3300046453 Ga0495627_015488 Ga0495627_015488_1805_2407 200
182 3300046453 Ga0495627_018920 Ga0495627_018920_798_1400 200
183 3300046460 Ga0495638_0043359 Ga0495638_0043359_1825_2430 200
184 3300046506 Ga0495583_0000286 Ga0495583_0000286_15530_16135 200
185 3300046512 Ga0495610_0000053 Ga0495610_0000053_15021_15623 200
186 3300046513 Ga0495616_0127874 Ga0495616_0127874_530_1135 200
187 3300046519 Ga0495632_0000006 Ga0495632_0000006_12897_13499 200
188 3300046520 Ga0495637_0001883 Ga0495637_0001883_3213_3815 200
189 3300046522 Ga0495643_0000031 Ga0495643_0000031_25570_26172 200
190 3300046524 Ga0495648_0014246 Ga0495648_0014246_3945_4547 200
191 3300046525 Ga0495663_0000008 Ga0495663_0000008_247116_247718 200
192 3300046530 Ga0495654_0053800 Ga0495654_0053800_540_1142 200
193 3300046530 Ga0495654_0069979 Ga0495654_0069979_232_834 200
194 3300046558 Ga0495633_0000190 Ga0495633_0000190_35068_35670 200
195 3300046558 Ga0495633_0012565 Ga0495633_0012565_2413_3015 200
196 3300046558 Ga0495633_0021573 Ga0495633_0021573_2029_2631 200
197 3300046664 Ga0495659_0271083 Ga0495659_0271083_43_645 200
198 3300046665 Ga0495661_0008761 Ga0495661_0008761_5126_5731 200
199 3300046665 Ga0495661_0061453 Ga0495661_0061453_880_1482 200
200 3300046691 Ga0495670_0006325 Ga0495670_0006325_3617_4222 200
201 3300046692 Ga0495671_0000021 Ga0495671_0000021_231649_232251 200
202 3300046692 Ga0495671_0023407 Ga0495671_0023407_1715_2317 200
203 3300047320 Ga0495672_0049131 Ga0495672_0049131_391_993 200
204 3300047470 Ga0495681_0000015 Ga0495681_0000015_75313_75915 200
205 3300047470 Ga0495681_0023307 Ga0495681_0023307_1782_2384 200
206 3300047472 Ga0495686_0000057 Ga0495686_0000057_15045_15650 200
207 3300047472 Ga0495686_0027313 Ga0495686_0027313_910_1512 200
208 3300047472 Ga0495686_0040201 Ga0495686_0040201_1352_1954 200
209 3300047472 Ga0495686_0095149 Ga0495686_0095149_276_878 200
210 3300048918 Ga0496115_0192722 Ga0496115_0192722_720_1343 200
211 3300048927 Ga0496124_0108381 Ga0496124_0108381_159_761 200
212 3300048928 Ga0496125_0161866 Ga0496125_0161866_688_1305 200
213 3300048929 Ga0496126_0012547 Ga0496126_0012547_4443_5066 200
214 3300048929 Ga0496126_0031466 Ga0496126_0031466_579_1181 200
215 3300048929 Ga0496126_0164658 Ga0496126_0164658_149_766 200
216 3300049460 Ga0495682_0001453 Ga0495682_0001453_9478_10083 200
217 3300053087 Ga0500643_000021 Ga0500643_000021_269262_269864 200
218 3300053087 Ga0500643_076482 Ga0500643_076482_208_885 200
219 3300053103 Ga0500555_000119 Ga0500555_000119_21533_22138 200
220 3300053108 Ga0500562_030353 Ga0500562_030353_223_825 200
221 3300053118 Ga0500594_0006317 Ga0500594_0006317_796_1398 200
222 3300053136 Ga0500559_0004877 Ga0500559_0004877_4411_5013 200
223 3300053148 Ga0500590_000261 Ga0500590_000261_12154_12756 200
224 3300053151 Ga0500604_0013487 Ga0500604_0013487_270_872 200
225 3300053153 Ga0500616_0003510 Ga0500616_0003510_3452_4054 200
226 3300053158 Ga0500627_0003255 Ga0500627_0003255_1545_2147 200
227 3300053178 Ga0500637_0008046 Ga0500637_0008046_1908_2531 200
228 3300055283 Ga0500661_000119 Ga0500661_000119_2827_3429 200

Structural Annotation

Top 5 Hits

ID Description Score Start End
4puf-assembly1.cif.gz_D complex between the salmonella t3ss effector slrp and its human target thioredoxin-1 0.8743 76 178
2vim-assembly1.cif.gz_A x-ray structure of fasciola hepatica thioredoxin 0.8739 78 181
6kil-assembly1.cif.gz_A n21q mutant thioredoxin from halobacterium salinarum nrc-1 0.87 77 181
1xw9-assembly3.cif.gz_C drosophila thioredoxin, oxidized, p21 0.8505 77 180
1aiu-assembly1.cif.gz_A-2 human thioredoxin (d60n mutant, reduced form) 0.8453 76 178
ID Description Score Start End Superfamily
2vimA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8739 78 181 3.40.30.10
af_Q8IFW4_1_119_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8591 78 181 3.40.30.10
af_Q8BZW8_26_197_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8577 78 181 3.40.30.10
2oe3B00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8522 76 178 3.40.30.10
af_Q9TW67_1_111_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8472 74 181 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A7Y7IZH8-F1-model_v4 Methylamine utilization protein MauD 0.918 52 194
AF-A0A382UKD2-F1-model_v4 Thioredoxin domain-containing protein 0.8992 68 199
AF-A0A812KXM7-F1-model_v4 deleted 0.8939 4 199
AF-A0A7Y7IZH8-F1-model_v4 Methylamine utilization protein MauD 0.8825 52 194
AF-A0A1I7Z9M3-F1-model_v4 Thioredoxin domain-containing protein 0.8805 41 199 GO:0003700
GO:0005634
GO:0009308
GO:0016638
GO:0043565

Feature Viewer

pLDDT pTM Quality
84.06 0.73 High
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Predicted Structure (AlphaFold2)

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