F341312
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 228 | 163 | 456 | 292 |
Family's Representative Sequence
| Representative Sequence | 3300046524|Ga0495648_0125202|Ga0495648_0125202_189_1124 |
| Length | 311 |
| Sequence | VTPKTIGIAEAAPAKINLALHVRARRADGYHEIETLFAFLRDGDTVSIEEADKDSFKLTGPFADALRGEGNNLVLAARDAFAAAHGPLPRLAITLDKHLPVASGIGGGSADAAATLRALARLKGIDPSTLADIALALGSDVPACLLGKSALGEGRGERLRVIEGLSGIPVLLVNPGVAVSTAAVFHGWDGADRGPLFPRQPGLVPGSAVQQTTNVEEALHGGCRDEPGMTEWLRAAIDSRNDLEAPARGIAPAIGAVIDLLATQPGVTLARMSGSGATCFALFDSEAARTAAARAIATSQPKWWCLESTLA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 2 | 3300001904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 | Metagenome | Rhizosphere |
| 3 | 3300001915 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 | Metagenome | Rhizosphere |
| 4 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 5 | 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Metagenome | Rhizosphere |
| 6 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 7 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 8 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 9 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 10 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 11 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 12 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 13 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 15 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 23 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 26 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 29 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 30 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 31 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 32 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 33 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 34 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 35 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 49 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 87 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 88 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 89 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 90 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 91 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 92 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 93 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 94 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 95 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046500 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 118 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 119 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 120 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 121 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 122 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 123 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 124 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 125 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 126 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 127 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 128 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 129 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 130 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 131 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 132 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 133 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 134 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 135 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 136 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 137 | 3300053079 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere | Metagenome | Endosphere |
| 138 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 139 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 140 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 141 | 3300053130 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere | Metagenome | Endosphere |
| 142 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 143 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 144 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 145 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 146 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 147 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 148 | 3300053735 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere | Metagenome | Endosphere |
| 149 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 150 | 2599185354 | Sphingomonas sp. NFR15 | Isolate | Rhizoplane |
| 151 | 2738541275 | Novosphingobium sp. GV027 | Isolate | Unclassified |
| 152 | 2738541301 | Novosphingobium sp. GV079 | Isolate | Unclassified |
| 153 | 2738541304 | Novosphingobium sp. GV061 | Isolate | Unclassified |
| 154 | 2738543022 | Novosphingobium sp. GV055 | Isolate | Unclassified |
| 155 | 2738543033 | Novosphingobium sp. GV064 | Isolate | Unclassified |
| 156 | 2751185897 | Sphingomonas panacis DCY99 | Isolate | Unclassified |
| 157 | 2885429604 | Sphingomonas sp. WZY 27 | Isolate | Rhizosphere |
| 158 | 2928027323 | Sphingomonas sp. 1185 | Isolate | Unclassified |
| 159 | 2928100450 | Novosphingobium sp. 1529 | Isolate | Rhizosphere |
| 160 | 2928959182 | Novosphingobium capsulatum 1057 | Isolate | Unclassified |
| 161 | 2984555340 | Sphingomonas sp. SORGH_AS789 | Isolate | Aerial Root |
| 162 | 2984564862 | Sphingomonas sp. SORGH_AS870 | Isolate | Aerial Root |
| 163 | 2993356040 | Sphingomonas sp. SORGH_AS742 | Isolate | Aerial Root |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.86 |
| Metatranscriptomes | 0 |
| Isolates | 6.14 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.32 |
| Bulb | 0 |
| Endosphere | 13.6 |
| Nodule | 0 |
| Rhizoplane | 7.02 |
| Rhizosphere | 62.28 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.32 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495648_0125202 | 3300046524 | Bacteria | 1375 |
| 2 | JGI24736J21556_1000007 | 3300001904 | Bacteria | 42946 |
| 3 | JGI24741J21665_1002636 | 3300001915 | Bacteria | 4588 |
| 4 | JGI24740J21852_10000934 | 3300001979 | Bacteria | 12997 |
| 5 | JGI24740J21852_10002928 | 3300001979 | Bacteria | 7594 |
| 6 | JGI24737J22298_10004970 | 3300001990 | Bacteria | 4607 |
| 7 | JGI25165J46597_1000032 | 3300003214 | Bacteria | 294371 |
| 8 | JGI25153J46596_10000006 | 3300003215 | Bacteria | 447760 |
| 9 | rootH2_10075701 | 3300003320 | Bacteria | 1354 |
| 10 | Ga0055525_1000040 | 3300003759 | Bacteria | 286933 |
| 11 | Ga0055542_1000046 | 3300003762 | Bacteria | 201922 |
| 12 | Ga0055529_1000007 | 3300003763 | Bacteria | 403604 |
| 13 | Ga0065704_10204321 | 3300005289 | Bacteria | 1133 |
| 14 | Ga0070676_10006699 | 3300005328 | Bacteria | 6173 |
| 15 | Ga0068868_100174729 | 3300005338 | Bacteria | 1780 |
| 16 | Ga0070661_100044060 | 3300005344 | Bacteria | 3259 |
| 17 | Ga0070668_100059622 | 3300005347 | Bacteria | 2954 |
| 18 | Ga0070669_100353592 | 3300005353 | Bacteria | 1193 |
| 19 | Ga0070675_100186130 | 3300005354 | Bacteria | 1797 |
| 20 | Ga0070674_100001589 | 3300005356 | Bacteria | 12172 |
| 21 | Ga0070674_100076252 | 3300005356 | Bacteria | 2383 |
| 22 | Ga0070659_100057763 | 3300005366 | Bacteria | 3060 |
| 23 | Ga0070659_100168402 | 3300005366 | Bacteria | 1793 |
| 24 | Ga0070678_100000645 | 3300005456 | Bacteria | 17064 |
| 25 | Ga0068867_100045825 | 3300005459 | Bacteria | 3209 |
| 26 | Ga0070679_100538622 | 3300005530 | Bacteria | 1111 |
| 27 | Ga0070684_100127835 | 3300005535 | Bacteria | 2290 |
| 28 | Ga0068853_100111979 | 3300005539 | Bacteria | 2425 |
| 29 | Ga0070665_100000458 | 3300005548 | Bacteria | 59389 |
| 30 | Ga0070665_100347550 | 3300005548 | Unclassified | 1488 |
| 31 | Ga0070665_100591336 | 3300005548 | Bacteria | 1123 |
| 32 | Ga0070664_100039944 | 3300005564 | Bacteria | 3955 |
| 33 | Ga0068859_100379151 | 3300005617 | Bacteria | 1510 |
| 34 | Ga0068851_10054447 | 3300005834 | Bacteria | 2037 |
| 35 | Ga0068863_100002103 | 3300005841 | Bacteria | 19737 |
| 36 | Ga0068858_100008985 | 3300005842 | Bacteria | 9568 |
| 37 | Ga0068860_100003275 | 3300005843 | Bacteria | 16672 |
| 38 | Ga0068862_100001693 | 3300005844 | Bacteria | 19978 |
| 39 | Ga0075366_10119053 | 3300006195 | Bacteria | 1591 |
| 40 | Ga0097620_100379162 | 3300006931 | Bacteria | 1510 |
| 41 | Ga0105245_10000918 | 3300009098 | Bacteria | 26787 |
| 42 | Ga0105247_10001942 | 3300009101 | Bacteria | 14375 |
| 43 | Ga0105243_10000202 | 3300009148 | Bacteria | 69670 |
| 44 | Ga0105243_10019992 | 3300009148 | Bacteria | 5077 |
| 45 | Ga0105241_10036315 | 3300009174 | Bacteria | 3707 |
| 46 | Ga0105248_10658732 | 3300009177 | Bacteria | 1181 |
| 47 | Ga0105238_10075210 | 3300009551 | Bacteria | 3369 |
| 48 | Ga0105238_10193300 | 3300009551 | Bacteria | 2011 |
| 49 | Ga0105249_10000015 | 3300009553 | Bacteria | 282138 |
| 50 | Ga0105246_10187319 | 3300011119 | Bacteria | 1599 |
| 51 | Ga0157373_10026478 | 3300013100 | Bacteria | 4189 |
| 52 | Ga0157371_10000024 | 3300013102 | Bacteria | 281202 |
| 53 | Ga0157378_10237516 | 3300013297 | Bacteria | 1740 |
| 54 | Ga0157372_10132961 | 3300013307 | Bacteria | 2864 |
| 55 | Ga0157372_10143976 | 3300013307 | Bacteria | 2748 |
| 56 | Ga0209563_100019 | 3300025230 | Bacteria | 697828 |
| 57 | Ga0209677_109789 | 3300025253 | Bacteria | 1675 |
| 58 | Ga0209148_1000026 | 3300025254 | Bacteria | 629213 |
| 59 | Ga0209233_1000066 | 3300025261 | Bacteria | 381218 |
| 60 | Ga0209455_1000005 | 3300025272 | Bacteria | 1416756 |
| 61 | Ga0209758_1000001 | 3300025297 | Bacteria | 1981790 |
| 62 | Ga0207710_10001597 | 3300025900 | Bacteria | 11102 |
| 63 | Ga0207647_10137238 | 3300025904 | Bacteria | 1434 |
| 64 | Ga0207645_10010160 | 3300025907 | Bacteria | 6471 |
| 65 | Ga0207705_10000984 | 3300025909 | Bacteria | 23249 |
| 66 | Ga0207654_10002277 | 3300025911 | Bacteria | 9842 |
| 67 | Ga0207671_10065705 | 3300025914 | Bacteria | 2699 |
| 68 | Ga0207657_10009528 | 3300025919 | Bacteria | 9752 |
| 69 | Ga0207657_10031561 | 3300025919 | Bacteria | 4798 |
| 70 | Ga0207649_10000425 | 3300025920 | Bacteria | 30960 |
| 71 | Ga0207652_10413489 | 3300025921 | Bacteria | 1217 |
| 72 | Ga0207694_10047452 | 3300025924 | Bacteria | 3322 |
| 73 | Ga0207659_10319847 | 3300025926 | Bacteria | 1280 |
| 74 | Ga0207687_10009216 | 3300025927 | Bacteria | 6458 |
| 75 | Ga0207690_10137985 | 3300025932 | Bacteria | 1793 |
| 76 | Ga0207706_10008155 | 3300025933 | Bacteria | 9662 |
| 77 | Ga0207706_10052092 | 3300025933 | Bacteria | 3614 |
| 78 | Ga0207709_10000201 | 3300025935 | Bacteria | 78554 |
| 79 | Ga0207669_10000075 | 3300025937 | Bacteria | 50601 |
| 80 | Ga0207669_10094238 | 3300025937 | Bacteria | 1958 |
| 81 | Ga0207667_10000010 | 3300025949 | Bacteria | 477432 |
| 82 | Ga0207712_10000023 | 3300025961 | Bacteria | 282081 |
| 83 | Ga0207668_10205769 | 3300025972 | Bacteria | 1570 |
| 84 | Ga0207640_10000829 | 3300025981 | Bacteria | 17600 |
| 85 | Ga0207677_10142920 | 3300026023 | Bacteria | 1835 |
| 86 | Ga0207703_10001382 | 3300026035 | Bacteria | 22160 |
| 87 | Ga0207639_10003097 | 3300026041 | Bacteria | 11175 |
| 88 | Ga0207678_10001801 | 3300026067 | Bacteria | 19617 |
| 89 | Ga0207678_10011605 | 3300026067 | Bacteria | 7739 |
| 90 | Ga0207702_10014651 | 3300026078 | Bacteria | 6506 |
| 91 | Ga0207641_10003365 | 3300026088 | Bacteria | 14202 |
| 92 | Ga0207648_10061627 | 3300026089 | Bacteria | 3271 |
| 93 | Ga0207674_10009093 | 3300026116 | Bacteria | 11403 |
| 94 | Ga0207683_10000067 | 3300026121 | Bacteria | 79552 |
| 95 | Ga0207683_10365454 | 3300026121 | Bacteria | 1325 |
| 96 | Ga0268266_10000002 | 3300028379 | Bacteria | 3059047 |
| 97 | Ga0268266_10101911 | 3300028379 | Bacteria | 2532 |
| 98 | Ga0268266_10527861 | 3300028379 | Bacteria | 1129 |
| 99 | Ga0268265_10000049 | 3300028380 | Bacteria | 177242 |
| 100 | Ga0268265_10012699 | 3300028380 | Bacteria | 5715 |
| 101 | Ga0268265_10271369 | 3300028380 | Unclassified | 1513 |
| 102 | Ga0268264_10008386 | 3300028381 | Bacteria | 8591 |
| 103 | Ga0307513_10002173 | 3300031456 | Bacteria | 27419 |
| 104 | Ga0307513_10099566 | 3300031456 | Bacteria | 2935 |
| 105 | Ga0307508_10008297 | 3300031616 | Bacteria | 9613 |
| 106 | Ga0307413_10074693 | 3300031824 | Bacteria | 2148 |
| 107 | Ga0307407_10118561 | 3300031903 | Bacteria | 1674 |
| 108 | Ga0307412_10071254 | 3300031911 | Bacteria | 2372 |
| 109 | Ga0307416_100040868 | 3300032002 | Bacteria | 3607 |
| 110 | Ga0307414_10001763 | 3300032004 | Bacteria | 11217 |
| 111 | Ga0307414_10214342 | 3300032004 | Bacteria | 1576 |
| 112 | Ga0307411_10354883 | 3300032005 | Bacteria | 1197 |
| 113 | Ga0307415_100085295 | 3300032126 | Bacteria | 2269 |
| 114 | Ga0495638_0000249 | 3300046460 | Bacteria | 73312 |
| 115 | Ga0495638_0000344 | 3300046460 | Bacteria | 58565 |
| 116 | Ga0495638_0029884 | 3300046460 | Bacteria | 3513 |
| 117 | Ga0495650_0000058 | 3300046471 | Bacteria | 302308 |
| 118 | Ga0495650_0064267 | 3300046471 | Bacteria | 1460 |
| 119 | Ga0495585_0035661 | 3300046492 | Bacteria | 2809 |
| 120 | Ga0495596_0015912 | 3300046500 | Bacteria | 3134 |
| 121 | Ga0495583_0000262 | 3300046506 | Bacteria | 86241 |
| 122 | Ga0495583_0001172 | 3300046506 | Bacteria | 28294 |
| 123 | Ga0495583_0097251 | 3300046506 | Bacteria | 1260 |
| 124 | Ga0495606_0003212 | 3300046507 | Bacteria | 17608 |
| 125 | Ga0495606_0078602 | 3300046507 | Bacteria | 2057 |
| 126 | Ga0495631_0044880 | 3300046518 | Bacteria | 1947 |
| 127 | Ga0495632_0002398 | 3300046519 | Bacteria | 14294 |
| 128 | Ga0495643_0002766 | 3300046522 | Bacteria | 13415 |
| 129 | Ga0495643_0002957 | 3300046522 | Bacteria | 12866 |
| 130 | Ga0495643_0034024 | 3300046522 | Bacteria | 2814 |
| 131 | Ga0495643_0166613 | 3300046522 | Bacteria | 1080 |
| 132 | Ga0495648_0000015 | 3300046524 | Bacteria | 285838 |
| 133 | Ga0495648_0000166 | 3300046524 | Bacteria | 77879 |
| 134 | Ga0495648_0040540 | 3300046524 | Bacteria | 2952 |
| 135 | Ga0495663_0015100 | 3300046525 | Bacteria | 2173 |
| 136 | Ga0495633_0000731 | 3300046558 | Bacteria | 29714 |
| 137 | Ga0495633_0015578 | 3300046558 | Bacteria | 3941 |
| 138 | Ga0495633_0019517 | 3300046558 | Bacteria | 3428 |
| 139 | Ga0495668_0000261 | 3300046616 | Bacteria | 74577 |
| 140 | Ga0495625_0000910 | 3300046660 | Bacteria | 39828 |
| 141 | Ga0495625_0002664 | 3300046660 | Bacteria | 19010 |
| 142 | Ga0495625_0084296 | 3300046660 | Bacteria | 2207 |
| 143 | Ga0495625_0221265 | 3300046660 | Bacteria | 1240 |
| 144 | Ga0495669_0000144 | 3300046684 | Bacteria | 45112 |
| 145 | Ga0495671_0000084 | 3300046692 | Bacteria | 89406 |
| 146 | Ga0495649_0085830 | 3300046694 | Bacteria | 1680 |
| 147 | Ga0495649_0088845 | 3300046694 | Bacteria | 1648 |
| 148 | Ga0495600_0000711 | 3300046809 | Bacteria | 17482 |
| 149 | Ga0495683_0001857 | 3300047323 | Bacteria | 13254 |
| 150 | Ga0495687_000683 | 3300047443 | Bacteria | 38503 |
| 151 | Ga0495687_002111 | 3300047443 | Bacteria | 16663 |
| 152 | Ga0495673_0000206 | 3300047469 | Bacteria | 89432 |
| 153 | Ga0495673_0064600 | 3300047469 | Bacteria | 1556 |
| 154 | Ga0495681_0005563 | 3300047470 | Bacteria | 8411 |
| 155 | Ga0495681_0082452 | 3300047470 | Bacteria | 1433 |
| 156 | Ga0495686_0001790 | 3300047472 | Bacteria | 21802 |
| 157 | Ga0496102_0000416 | 3300048905 | Bacteria | 49243 |
| 158 | Ga0496102_0000758 | 3300048905 | Bacteria | 31549 |
| 159 | Ga0496103_0000186 | 3300048906 | Bacteria | 62771 |
| 160 | Ga0496103_0000270 | 3300048906 | Bacteria | 49232 |
| 161 | Ga0496104_0052738 | 3300048907 | Bacteria | 3842 |
| 162 | Ga0496105_0003165 | 3300048908 | Bacteria | 12126 |
| 163 | Ga0496107_0247002 | 3300048910 | Bacteria | 1328 |
| 164 | Ga0496110_0044656 | 3300048913 | Bacteria | 3870 |
| 165 | Ga0496110_0054195 | 3300048913 | Bacteria | 3527 |
| 166 | Ga0496111_0082074 | 3300048914 | Bacteria | 2354 |
| 167 | Ga0496111_0115703 | 3300048914 | Bacteria | 1977 |
| 168 | Ga0496114_0005133 | 3300048917 | Bacteria | 10211 |
| 169 | Ga0496114_0042007 | 3300048917 | Bacteria | 3789 |
| 170 | Ga0496115_0001380 | 3300048918 | Bacteria | 17341 |
| 171 | Ga0496115_0308697 | 3300048918 | Bacteria | 1295 |
| 172 | Ga0496116_0001339 | 3300048919 | Bacteria | 28009 |
| 173 | Ga0496116_0005657 | 3300048919 | Bacteria | 11507 |
| 174 | Ga0496117_0000794 | 3300048920 | Bacteria | 49243 |
| 175 | Ga0496117_0000977 | 3300048920 | Bacteria | 43773 |
| 176 | Ga0496118_0000144 | 3300048921 | Bacteria | 124411 |
| 177 | Ga0496118_0000826 | 3300048921 | Bacteria | 49243 |
| 178 | Ga0496119_0011577 | 3300048922 | Bacteria | 7279 |
| 179 | Ga0496119_0068624 | 3300048922 | Bacteria | 2087 |
| 180 | Ga0496120_0019689 | 3300048923 | Bacteria | 4310 |
| 181 | Ga0496120_0023377 | 3300048923 | Bacteria | 3870 |
| 182 | Ga0496121_0000977 | 3300048924 | Bacteria | 51197 |
| 183 | Ga0496121_0058986 | 3300048924 | Bacteria | 3168 |
| 184 | Ga0496122_0031428 | 3300048925 | Bacteria | 4419 |
| 185 | Ga0496122_0051584 | 3300048925 | Bacteria | 3124 |
| 186 | Ga0496123_0005738 | 3300048926 | Bacteria | 12361 |
| 187 | Ga0496123_0038485 | 3300048926 | Bacteria | 3360 |
| 188 | Ga0496124_0000177 | 3300048927 | Bacteria | 128355 |
| 189 | Ga0496124_0000871 | 3300048927 | Bacteria | 49243 |
| 190 | Ga0496124_0007646 | 3300048927 | Bacteria | 11438 |
| 191 | Ga0496125_0000335 | 3300048928 | Bacteria | 90043 |
| 192 | Ga0496125_0002814 | 3300048928 | Bacteria | 21955 |
| 193 | Ga0496125_0031477 | 3300048928 | Bacteria | 4728 |
| 194 | Ga0496126_0000505 | 3300048929 | Bacteria | 76567 |
| 195 | Ga0496126_0134366 | 3300048929 | Bacteria | 2135 |
| 196 | Ga0500610_0000312 | 3300053079 | Bacteria | 14602 |
| 197 | Ga0500643_009439 | 3300053087 | Bacteria | 3728 |
| 198 | Ga0500643_009722 | 3300053087 | Bacteria | 3651 |
| 199 | Ga0500643_009846 | 3300053087 | Bacteria | 3614 |
| 200 | Ga0500595_002107 | 3300053119 | Bacteria | 10157 |
| 201 | Ga0500607_057079 | 3300053121 | Bacteria | 2059 |
| 202 | Ga0500642_0001967 | 3300053130 | Bacteria | 5964 |
| 203 | Ga0500658_0001058 | 3300053134 | Bacteria | 11275 |
| 204 | Ga0500559_0001746 | 3300053136 | Bacteria | 11915 |
| 205 | Ga0500559_0007717 | 3300053136 | Bacteria | 4750 |
| 206 | Ga0500559_0098132 | 3300053136 | Bacteria | 1347 |
| 207 | Ga0500559_0133671 | 3300053136 | Bacteria | 1159 |
| 208 | Ga0500568_0054370 | 3300053139 | Bacteria | 1566 |
| 209 | Ga0500573_0234793 | 3300053140 | Unclassified | 954 |
| 210 | Ga0500636_0007001 | 3300053177 | Bacteria | 6501 |
| 211 | Ga0500645_000062 | 3300053730 | Bacteria | 85561 |
| 212 | Ga0500645_000709 | 3300053730 | Bacteria | 20684 |
| 213 | Ga0500596_001387 | 3300053735 | Bacteria | 4897 |
| 214 | Ga0500661_000173 | 3300055283 | Bacteria | 11231 |
| 215 | 2600202491 | 2599185354 | Bacteria | 4398675 |
| 216 | 2738709994 | 2738541275 | Bacteria | 4830863 |
| 217 | 2738848419 | 2738541301 | Bacteria | 4834102 |
| 218 | 2738864148 | 2738541304 | Bacteria | 4833665 |
| 219 | 2739296666 | 2738543022 | Bacteria | 4835059 |
| 220 | 2739358344 | 2738543033 | Bacteria | 4833336 |
| 221 | 2753764284 | 2751185897 | Bacteria | 5322941 |
| 222 | 2885430132 | 2885429604 | Bacteria | 3642894 |
| 223 | 2928027736 | 2928027323 | Bacteria | 4382488 |
| 224 | 2928101693 | 2928100450 | Bacteria | 4837635 |
| 225 | 2928959783 | 2928959182 | Bacteria | 4725774 |
| 226 | 2984557971 | 2984555340 | Bacteria | 4247089 |
| 227 | 2984567663 | 2984564862 | Bacteria | 4339992 |
| 228 | 2993358715 | 2993356040 | Bacteria | 4247105 |
| 229 | Ga0495648_0125202 | |||
| 230 | JGI24736J21556_1000007 | |||
| 231 | JGI24741J21665_1002636 | |||
| 232 | JGI24740J21852_10000934 | |||
| 233 | JGI24740J21852_10002928 | |||
| 234 | JGI24737J22298_10004970 | |||
| 235 | JGI25165J46597_1000032 | |||
| 236 | JGI25153J46596_10000006 | |||
| 237 | rootH2_10075701 | |||
| 238 | Ga0055525_1000040 | |||
| 239 | Ga0055542_1000046 | |||
| 240 | Ga0055529_1000007 | |||
| 241 | Ga0065704_10204321 | |||
| 242 | Ga0070676_10006699 | |||
| 243 | Ga0068868_100174729 | |||
| 244 | Ga0070661_100044060 | |||
| 245 | Ga0070668_100059622 | |||
| 246 | Ga0070669_100353592 | |||
| 247 | Ga0070675_100186130 | |||
| 248 | Ga0070674_100001589 | |||
| 249 | Ga0070674_100076252 | |||
| 250 | Ga0070659_100057763 | |||
| 251 | Ga0070659_100168402 | |||
| 252 | Ga0070678_100000645 | |||
| 253 | Ga0068867_100045825 | |||
| 254 | Ga0070679_100538622 | |||
| 255 | Ga0070684_100127835 | |||
| 256 | Ga0068853_100111979 | |||
| 257 | Ga0070665_100000458 | |||
| 258 | Ga0070665_100347550 | |||
| 259 | Ga0070665_100591336 | |||
| 260 | Ga0070664_100039944 | |||
| 261 | Ga0068859_100379151 | |||
| 262 | Ga0068851_10054447 | |||
| 263 | Ga0068863_100002103 | |||
| 264 | Ga0068858_100008985 | |||
| 265 | Ga0068860_100003275 | |||
| 266 | Ga0068862_100001693 | |||
| 267 | Ga0075366_10119053 | |||
| 268 | Ga0097620_100379162 | |||
| 269 | Ga0105245_10000918 | |||
| 270 | Ga0105247_10001942 | |||
| 271 | Ga0105243_10000202 | |||
| 272 | Ga0105243_10019992 | |||
| 273 | Ga0105241_10036315 | |||
| 274 | Ga0105248_10658732 | |||
| 275 | Ga0105238_10075210 | |||
| 276 | Ga0105238_10193300 | |||
| 277 | Ga0105249_10000015 | |||
| 278 | Ga0105246_10187319 | |||
| 279 | Ga0157373_10026478 | |||
| 280 | Ga0157371_10000024 | |||
| 281 | Ga0157378_10237516 | |||
| 282 | Ga0157372_10132961 | |||
| 283 | Ga0157372_10143976 | |||
| 284 | Ga0209563_100019 | |||
| 285 | Ga0209677_109789 | |||
| 286 | Ga0209148_1000026 | |||
| 287 | Ga0209233_1000066 | |||
| 288 | Ga0209455_1000005 | |||
| 289 | Ga0209758_1000001 | |||
| 290 | Ga0207710_10001597 | |||
| 291 | Ga0207647_10137238 | |||
| 292 | Ga0207645_10010160 | |||
| 293 | Ga0207705_10000984 | |||
| 294 | Ga0207654_10002277 | |||
| 295 | Ga0207671_10065705 | |||
| 296 | Ga0207657_10009528 | |||
| 297 | Ga0207657_10031561 | |||
| 298 | Ga0207649_10000425 | |||
| 299 | Ga0207652_10413489 | |||
| 300 | Ga0207694_10047452 | |||
| 301 | Ga0207659_10319847 | |||
| 302 | Ga0207687_10009216 | |||
| 303 | Ga0207690_10137985 | |||
| 304 | Ga0207706_10008155 | |||
| 305 | Ga0207706_10052092 | |||
| 306 | Ga0207709_10000201 | |||
| 307 | Ga0207669_10000075 | |||
| 308 | Ga0207669_10094238 | |||
| 309 | Ga0207667_10000010 | |||
| 310 | Ga0207712_10000023 | |||
| 311 | Ga0207668_10205769 | |||
| 312 | Ga0207640_10000829 | |||
| 313 | Ga0207677_10142920 | |||
| 314 | Ga0207703_10001382 | |||
| 315 | Ga0207639_10003097 | |||
| 316 | Ga0207678_10001801 | |||
| 317 | Ga0207678_10011605 | |||
| 318 | Ga0207702_10014651 | |||
| 319 | Ga0207641_10003365 | |||
| 320 | Ga0207648_10061627 | |||
| 321 | Ga0207674_10009093 | |||
| 322 | Ga0207683_10000067 | |||
| 323 | Ga0207683_10365454 | |||
| 324 | Ga0268266_10000002 | |||
| 325 | Ga0268266_10101911 | |||
| 326 | Ga0268266_10527861 | |||
| 327 | Ga0268265_10000049 | |||
| 328 | Ga0268265_10012699 | |||
| 329 | Ga0268265_10271369 | |||
| 330 | Ga0268264_10008386 | |||
| 331 | Ga0307513_10002173 | |||
| 332 | Ga0307513_10099566 | |||
| 333 | Ga0307508_10008297 | |||
| 334 | Ga0307413_10074693 | |||
| 335 | Ga0307407_10118561 | |||
| 336 | Ga0307412_10071254 | |||
| 337 | Ga0307416_100040868 | |||
| 338 | Ga0307414_10001763 | |||
| 339 | Ga0307414_10214342 | |||
| 340 | Ga0307411_10354883 | |||
| 341 | Ga0307415_100085295 | |||
| 342 | Ga0495638_0000249 | |||
| 343 | Ga0495638_0000344 | |||
| 344 | Ga0495638_0029884 | |||
| 345 | Ga0495650_0000058 | |||
| 346 | Ga0495650_0064267 | |||
| 347 | Ga0495585_0035661 | |||
| 348 | Ga0495596_0015912 | |||
| 349 | Ga0495583_0000262 | |||
| 350 | Ga0495583_0001172 | |||
| 351 | Ga0495583_0097251 | |||
| 352 | Ga0495606_0003212 | |||
| 353 | Ga0495606_0078602 | |||
| 354 | Ga0495631_0044880 | |||
| 355 | Ga0495632_0002398 | |||
| 356 | Ga0495643_0002766 | |||
| 357 | Ga0495643_0002957 | |||
| 358 | Ga0495643_0034024 | |||
| 359 | Ga0495643_0166613 | |||
| 360 | Ga0495648_0000015 | |||
| 361 | Ga0495648_0000166 | |||
| 362 | Ga0495648_0040540 | |||
| 363 | Ga0495663_0015100 | |||
| 364 | Ga0495633_0000731 | |||
| 365 | Ga0495633_0015578 | |||
| 366 | Ga0495633_0019517 | |||
| 367 | Ga0495668_0000261 | |||
| 368 | Ga0495625_0000910 | |||
| 369 | Ga0495625_0002664 | |||
| 370 | Ga0495625_0084296 | |||
| 371 | Ga0495625_0221265 | |||
| 372 | Ga0495669_0000144 | |||
| 373 | Ga0495671_0000084 | |||
| 374 | Ga0495649_0085830 | |||
| 375 | Ga0495649_0088845 | |||
| 376 | Ga0495600_0000711 | |||
| 377 | Ga0495683_0001857 | |||
| 378 | Ga0495687_000683 | |||
| 379 | Ga0495687_002111 | |||
| 380 | Ga0495673_0000206 | |||
| 381 | Ga0495673_0064600 | |||
| 382 | Ga0495681_0005563 | |||
| 383 | Ga0495681_0082452 | |||
| 384 | Ga0495686_0001790 | |||
| 385 | Ga0496102_0000416 | |||
| 386 | Ga0496102_0000758 | |||
| 387 | Ga0496103_0000186 | |||
| 388 | Ga0496103_0000270 | |||
| 389 | Ga0496104_0052738 | |||
| 390 | Ga0496105_0003165 | |||
| 391 | Ga0496107_0247002 | |||
| 392 | Ga0496110_0044656 | |||
| 393 | Ga0496110_0054195 | |||
| 394 | Ga0496111_0082074 | |||
| 395 | Ga0496111_0115703 | |||
| 396 | Ga0496114_0005133 | |||
| 397 | Ga0496114_0042007 | |||
| 398 | Ga0496115_0001380 | |||
| 399 | Ga0496115_0308697 | |||
| 400 | Ga0496116_0001339 | |||
| 401 | Ga0496116_0005657 | |||
| 402 | Ga0496117_0000794 | |||
| 403 | Ga0496117_0000977 | |||
| 404 | Ga0496118_0000144 | |||
| 405 | Ga0496118_0000826 | |||
| 406 | Ga0496119_0011577 | |||
| 407 | Ga0496119_0068624 | |||
| 408 | Ga0496120_0019689 | |||
| 409 | Ga0496120_0023377 | |||
| 410 | Ga0496121_0000977 | |||
| 411 | Ga0496121_0058986 | |||
| 412 | Ga0496122_0031428 | |||
| 413 | Ga0496122_0051584 | |||
| 414 | Ga0496123_0005738 | |||
| 415 | Ga0496123_0038485 | |||
| 416 | Ga0496124_0000177 | |||
| 417 | Ga0496124_0000871 | |||
| 418 | Ga0496124_0007646 | |||
| 419 | Ga0496125_0000335 | |||
| 420 | Ga0496125_0002814 | |||
| 421 | Ga0496125_0031477 | |||
| 422 | Ga0496126_0000505 | |||
| 423 | Ga0496126_0134366 | |||
| 424 | Ga0500610_0000312 | |||
| 425 | Ga0500643_009439 | |||
| 426 | Ga0500643_009722 | |||
| 427 | Ga0500643_009846 | |||
| 428 | Ga0500595_002107 | |||
| 429 | Ga0500607_057079 | |||
| 430 | Ga0500642_0001967 | |||
| 431 | Ga0500658_0001058 | |||
| 432 | Ga0500559_0001746 | |||
| 433 | Ga0500559_0007717 | |||
| 434 | Ga0500559_0098132 | |||
| 435 | Ga0500559_0133671 | |||
| 436 | Ga0500568_0054370 | |||
| 437 | Ga0500573_0234793 | |||
| 438 | Ga0500636_0007001 | |||
| 439 | Ga0500645_000062 | |||
| 440 | Ga0500645_000709 | |||
| 441 | Ga0500596_001387 | |||
| 442 | Ga0500661_000173 | |||
| 443 | 2600202491 | |||
| 444 | 2738709994 | |||
| 445 | 2738848419 | |||
| 446 | 2738864148 | |||
| 447 | 2739296666 | |||
| 448 | 2739358344 | |||
| 449 | 2753764284 | |||
| 450 | 2885430132 | |||
| 451 | 2928027736 | |||
| 452 | 2928101693 | |||
| 453 | 2928959783 | |||
| 454 | 2984557971 | |||
| 455 | 2984567663 | |||
| 456 | 2993358715 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4emd-assembly1.cif.gz_A | crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to cmp and so4 | 0.8598 | 3 | 282 |
| 1uek-assembly1.cif.gz_A | crystal structure of 4-(cytidine 5'-diphospho)-2c-methyl-d-erythritol kinase | 0.8573 | 5 | 280 |
| 3pyf-assembly1.cif.gz_A | mycobacterium tuberculosis 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (ispe) in complex with amp-pnp | 0.8546 | 4 | 278 |
| 1uek-assembly1.cif.gz_A | crystal structure of 4-(cytidine 5'-diphospho)-2c-methyl-d-erythritol kinase | 0.8543 | 5 | 280 |
| 4ed4-assembly1.cif.gz_A | crystal structure of ispe (4-diphosphocytidyl-2-c-methyl-d-erythritol kinase) from mycobacterium abcessus, bound to atp | 0.854 | 4 | 281 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4dxlA01 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.9257 | 4 | 158 | 3.30.230.10 |
| af_Q2G0S8_1_157_3.30.230.10 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.9154 | 6 | 158 | 3.30.230.10 |
| af_Q8S2G0_72_245_3.30.230.10 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.9063 | 3 | 158 | 3.30.230.10 |
| af_Q2G0S8_1_157_3.30.230.10 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.8878 | 6 | 158 | 3.30.230.10 |
| 2v2qB01 | Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; | 0.8801 | 4 | 158 | 3.30.230.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A239H5K7-F1-model_v4 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9839 | 47 | 277 |
GO:0005524
GO:0016114 GO:0019288 GO:0050515 |
| AF-A0A845MI74-F1-model_v4 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9662 | 5 | 279 |
GO:0005524
GO:0016114 GO:0019288 GO:0050515 |
| AF-A0A4R2SUV7-F1-model_v4 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9635 | 3 | 277 |
GO:0005524
GO:0016114 GO:0019288 GO:0050515 |
| AF-A0A354EMS8-F1-model_v4 | 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | 0.9623 | 3 | 109 |
GO:0050515
|
| AF-A0A1Y6FI73-F1-model_v4 | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (EC 2.7.1.148) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) | 0.9621 | 3 | 278 |
GO:0005524
GO:0016114 GO:0019288 GO:0050515 |