F341166
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 228 | 184 | 456 | 419 |
Family's Representative Sequence
| Representative Sequence | 3300037312|Ga0395899_0049771|Ga0395899_0049771_170_1630 |
| Length | 486 |
| Sequence | VRTKRRKAHALLLKLGGTAGRTLLVPIGRRAFFVFFGKWAAGKEGSIDMLDMKWIREHEDVLEQMAMQKGFEVSVAALVELDARKRELLRQVEEGRARRNALAQQVAVLKREGAADEASRLQVEAKALAAQMVAAEVELRDAAAACERQLLLMPNRYAPDTPLGLSDADNVEVRRVGEPPAFPFAAKDHMELGEALRLIDVPRGVKTAGSRSYVLTGAGALLHRAVQQLALDLLADRGFTPLEVPVLAREEALVGTGFFPHGRDQTYRLDQDDLWLVGTAEVPLLTYYAGEVVDVAAGPIRLAGVSSCFRREAGSAGRDVRGLYRVHQFAKVEQVVLCRADLAEAEMWLERITGYAEELLAMLELPYRVVRICSGDLGFKNYKQYDIETWMPSRSGYGETHSSSLLLDFQSRRSSIRYRDENGRLRYVYTLNNTAVASPRILIPLLENHQREDGTVRIPAALQPYMRGLETLGPAAGVNDSFAGAR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 2 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 3 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 4 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 5 | 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 6 | 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 7 | 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 8 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 9 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 10 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 11 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 12 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 24 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 26 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 27 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 28 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 29 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 30 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 31 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 32 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 33 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 34 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 35 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 36 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 37 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 38 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 39 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 54 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 56 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 80 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 82 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 83 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 84 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 85 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 86 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 87 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 88 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 89 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 90 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 91 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 92 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 94 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 95 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 96 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 97 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 98 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 99 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 100 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 101 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 102 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 103 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 104 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 105 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 106 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 107 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 108 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 109 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 110 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 111 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 124 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 125 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 126 | 2508501039 | Frankia saprophytica CN3 | Isolate | Nodule |
| 127 | 2517572101 | Frankia sp. DC12 | Isolate | Nodule |
| 128 | 2563366752 | Paenibacillus pini JCM 16418 | Isolate | Rhizosphere |
| 129 | 2576861424 | Paenibacillus sabinae T27 | Isolate | Rhizosphere |
| 130 | 2579778775 | Paenibacillus durus P3L-5 | Isolate | Unclassified |
| 131 | 2585428059 | Paenibacillus chondroitinus OK414 | Isolate | Rhizosphere |
| 132 | 2593339198 | Paenibacillus sp. UNCCL117 | Isolate | Unclassified |
| 133 | 2600255286 | Paenibacillus sp. NFR01 | Isolate | Rhizoplane |
| 134 | 2643221676 | Paenibacillus sp. Root444D2 | Isolate | Unclassified |
| 135 | 2671180694 | Paenibacillus sp. A3 | Isolate | Unclassified |
| 136 | 2675902999 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 137 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 138 | 2687453737 | Frankia sp. BMG5.36 | Isolate | Nodule |
| 139 | 2721755693 | Paenibacillus polymyxa YC0573 | Isolate | Rhizosphere |
| 140 | 2728369359 | Paenibacillus polymyxa YC0136 | Isolate | Rhizosphere |
| 141 | 2751185905 | Paenibacillus kribbensis 6hRe76 | Isolate | Unclassified |
| 142 | 2773857921 | Frankia asymbiotica NRRL B-16386 | Isolate | Nodule |
| 143 | 2802428803 | Paenibacillus peoriae NMA1017 | Isolate | Rhizosphere |
| 144 | 2818991459 | Paenibacillus sp. 597 | Isolate | Unclassified |
| 145 | 2857453340 | Paenibacillus sp. R-74130 | Isolate | Unclassified |
| 146 | 2864733723 | Paenibacillus sp. JGP012 | Isolate | Rhizosphere |
| 147 | 2865002811 | Paenibacillus sp. R-74131 | Isolate | Unclassified |
| 148 | 2881636855 | Paenibacillus sp. 7197 | Isolate | Rhizosphere |
| 149 | 2885526491 | Paenibacillus sp. LK1 | Isolate | Rhizosphere |
| 150 | 2888578766 | Paenibacillus lycopersici 12200R-189 | Isolate | Rhizosphere |
| 151 | 2889049205 | Paenibacillus rhizovicinus 14171R-81 | Isolate | Rhizosphere |
| 152 | 2889276214 | Paenibacillus sp. PvR133 | Isolate | Rhizosphere |
| 153 | 2904113452 | Paenibacillus paridis py1325 | Isolate | Unclassified |
| 154 | 2904490793 | Paenibacillus sp. 1295 | Isolate | Rhizosphere |
| 155 | 2904595352 | Paenibacillus sp. 1182 | Isolate | Unclassified |
| 156 | 2904755435 | Paenibacillus aceris KACC 19194 | Isolate | Rhizosphere |
| 157 | 2907202186 | Paenibacillus sp. HJL G12 | Isolate | Unclassified |
| 158 | 2916971899 | Alkalihalobacillus miscanthi AK13 | Isolate | Rhizosphere |
| 159 | 2919160200 | Paenibacillus sp. 2003 | Isolate | Unclassified |
| 160 | 2919425241 | Bacillus sp. 3255 | Isolate | Rhizosphere |
| 161 | 2938649242 | Paenibacillus helianthi P26E | Isolate | Rhizosphere |
| 162 | 2939679117 | Paenibacillus sp. 4624 | Isolate | Rhizosphere |
| 163 | 2939702853 | Paenibacillus sp. PvR008 | Isolate | Rhizosphere |
| 164 | 2946053406 | Paenibacillus sp. W4I10 | Isolate | Rhizosphere |
| 165 | 2968558590 | Paenibacillus sp. P3E | Isolate | Rhizosphere |
| 166 | 2971410472 | Paenibacillus oryzisoli 1ZS3-15 | Isolate | Unclassified |
| 167 | 2971511577 | Paenibacillus apii 7124 | Isolate | Rhizosphere |
| 168 | 2980176882 | Paenibacillus apii 7028 | Isolate | Rhizosphere |
| 169 | 2980182181 | Paenibacillus cymbidii R196 | Isolate | Unclassified |
| 170 | 2984527788 | Paenibacillus sp. SORGH_AS306 | Isolate | Aerial Root |
| 171 | 2984532647 | Paenibacillus sp. SORGH_AS338 | Isolate | Aerial Root |
| 172 | 2988225383 | Paenibacillus sp. P46E | Isolate | Rhizosphere |
| 173 | 2996632988 | Paenibacillus sp. P32E | Isolate | Rhizosphere |
| 174 | 2996706504 | Paenibacillus sp. OT2-17 | Isolate | Rhizosphere |
| 175 | 648028048 | Paenibacillus polymyxa E681 | Isolate | Rhizosphere |
| 176 | 8002317523 | Cohnella sp. GbtcB17 | Isolate | Unclassified |
| 177 | 8002775197 | Frankia nepalensis CN7 | Isolate | Nodule |
| 178 | 8002784119 | Frankia sp. AgB1.9 | Isolate | Nodule |
| 179 | 8046991243 | Cohnella rhizosphaerae DSM 28161 | Isolate | Rhizosphere |
| 180 | 8054465665 | Paenibacillus sonchi IIRRBNF1 | Isolate | Rhizosphere |
| 181 | 8055632911 | Paenibacillus radicibacter N1-5-1-14 | Isolate | Unclassified |
| 182 | 8056533031 | Paenibacillus qinlingensis TEGT-2 | Isolate | Unclassified |
| 183 | 8057733483 | Paenibacillus apiarius MW-14 | Isolate | Rhizosphere |
| 184 | 8057977335 | Paenibacillus oenotherae DT7-4 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 72.81 |
| Metatranscriptomes | 1.32 |
| Isolates | 25.88 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0.88 |
| Bulb | 0 |
| Endosphere | 3.51 |
| Nodule | 3.07 |
| Rhizoplane | 3.95 |
| Rhizosphere | 67.54 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.58 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0395899_0049771 | 3300037312 | Bacteria | 3114 |
| 2 | JGI25404J52841_10000551 | 3300003659 | Bacteria | 5546 |
| 3 | Ga0055538_1000468 | 3300003751 | Bacteria | 14957 |
| 4 | Ga0055535_1002868 | 3300003761 | Bacteria | 5410 |
| 5 | JGI25405J52794_10002354 | 3300003911 | Unclassified | 3245 |
| 6 | Ga0058859_10027630 | 3300004798 | Bacteria | 2714 |
| 7 | Ga0058860_11983036 | 3300004801 | Bacteria | 1607 |
| 8 | Ga0068869_100126219 | 3300005334 | Bacteria | 1962 |
| 9 | Ga0070680_100017258 | 3300005336 | Bacteria | 5688 |
| 10 | Ga0068868_100012711 | 3300005338 | Bacteria | 6157 |
| 11 | Ga0068868_100188340 | 3300005338 | Bacteria | 1715 |
| 12 | Ga0070689_100001461 | 3300005340 | Bacteria | 15072 |
| 13 | Ga0070689_100105973 | 3300005340 | Bacteria | 2230 |
| 14 | Ga0070687_100027963 | 3300005343 | Bacteria | 2730 |
| 15 | Ga0070675_100111353 | 3300005354 | Bacteria | 2316 |
| 16 | Ga0070701_10008336 | 3300005438 | Bacteria | 4478 |
| 17 | Ga0070708_100072155 | 3300005445 | Bacteria | 3110 |
| 18 | Ga0070678_100008361 | 3300005456 | Bacteria | 6197 |
| 19 | Ga0070681_10025348 | 3300005458 | Bacteria | 5965 |
| 20 | Ga0070706_100198358 | 3300005467 | Bacteria | 1875 |
| 21 | Ga0070706_100237280 | 3300005467 | Bacteria | 1703 |
| 22 | Ga0070707_100044276 | 3300005468 | Bacteria | 4261 |
| 23 | Ga0070679_100001537 | 3300005530 | Bacteria | 20571 |
| 24 | Ga0070684_100177776 | 3300005535 | Bacteria | 1935 |
| 25 | Ga0070686_100008930 | 3300005544 | Bacteria | 5616 |
| 26 | Ga0068855_100005673 | 3300005563 | Bacteria | 15246 |
| 27 | Ga0070664_100016681 | 3300005564 | Bacteria | 6022 |
| 28 | Ga0068857_100025293 | 3300005577 | Bacteria | 5229 |
| 29 | Ga0068859_100000042 | 3300005617 | Bacteria | 158982 |
| 30 | Ga0068859_100255345 | 3300005617 | Bacteria | 1843 |
| 31 | Ga0068859_100280809 | 3300005617 | Bacteria | 1758 |
| 32 | Ga0068863_100001046 | 3300005841 | Bacteria | 27696 |
| 33 | Ga0068863_100042830 | 3300005841 | Bacteria | 4301 |
| 34 | Ga0068858_100003935 | 3300005842 | Bacteria | 14665 |
| 35 | Ga0068862_100000623 | 3300005844 | Bacteria | 36811 |
| 36 | Ga0081455_10014851 | 3300005937 | Bacteria | 7596 |
| 37 | Ga0081538_10003960 | 3300005981 | Bacteria | 13810 |
| 38 | Ga0081540_1000538 | 3300005983 | Bacteria | 36679 |
| 39 | Ga0081539_10008294 | 3300005985 | Bacteria | 9104 |
| 40 | Ga0068871_100108186 | 3300006358 | Bacteria | 2336 |
| 41 | Ga0075428_100000443 | 3300006844 | Bacteria | 41278 |
| 42 | Ga0075428_100006183 | 3300006844 | Bacteria | 13321 |
| 43 | Ga0075428_100025068 | 3300006844 | Bacteria | 6598 |
| 44 | Ga0075428_100176616 | 3300006844 | Bacteria | 2313 |
| 45 | Ga0075430_100066503 | 3300006846 | Unclassified | 3027 |
| 46 | Ga0075431_100056063 | 3300006847 | Bacteria | 4065 |
| 47 | Ga0075429_100040185 | 3300006880 | Bacteria | 4071 |
| 48 | Ga0075429_100072784 | 3300006880 | Bacteria | 2993 |
| 49 | Ga0075429_100235281 | 3300006880 | Unclassified | 1605 |
| 50 | Ga0097620_100000042 | 3300006931 | Bacteria | 158982 |
| 51 | Ga0097620_100255338 | 3300006931 | Bacteria | 1843 |
| 52 | Ga0097620_100280813 | 3300006931 | Bacteria | 1758 |
| 53 | Ga0105251_10012803 | 3300009011 | Bacteria | 4726 |
| 54 | Ga0105240_10005938 | 3300009093 | Bacteria | 18085 |
| 55 | Ga0111539_10000290 | 3300009094 | Bacteria | 60602 |
| 56 | Ga0111539_10011853 | 3300009094 | Bacteria | 10929 |
| 57 | Ga0105247_10002449 | 3300009101 | Bacteria | 12616 |
| 58 | Ga0114129_10386344 | 3300009147 | Unclassified | 1847 |
| 59 | Ga0105248_10000153 | 3300009177 | Bacteria | 80607 |
| 60 | Ga0105237_10300032 | 3300009545 | Bacteria | 1610 |
| 61 | Ga0105249_10007446 | 3300009553 | Bacteria | 9550 |
| 62 | Ga0105249_10011486 | 3300009553 | Bacteria | 7779 |
| 63 | Ga0105249_10036332 | 3300009553 | Bacteria | 4468 |
| 64 | Ga0105246_10000132 | 3300011119 | Bacteria | 34860 |
| 65 | Ga0105246_10087846 | 3300011119 | Bacteria | 2232 |
| 66 | Ga0157378_10094873 | 3300013297 | Bacteria | 2716 |
| 67 | Ga0163163_10005712 | 3300014325 | Bacteria | 10789 |
| 68 | Ga0157379_10031624 | 3300014968 | Unclassified | 4715 |
| 69 | Ga0157379_10174317 | 3300014968 | Bacteria | 1941 |
| 70 | Ga0157376_10159523 | 3300014969 | Bacteria | 2043 |
| 71 | Ga0206353_10518787 | 3300020082 | Bacteria | 2491 |
| 72 | Ga0209566_100132 | 3300025225 | Bacteria | 91879 |
| 73 | Ga0209566_100180 | 3300025225 | Bacteria | 67946 |
| 74 | Ga0209675_1007328 | 3300025291 | Bacteria | 4250 |
| 75 | Ga0209025_1000466 | 3300025294 | Bacteria | 79039 |
| 76 | Ga0207710_10012964 | 3300025900 | Bacteria | 3512 |
| 77 | Ga0207688_10063150 | 3300025901 | Bacteria | 2089 |
| 78 | Ga0207705_10155780 | 3300025909 | Bacteria | 1714 |
| 79 | Ga0207684_10176841 | 3300025910 | Bacteria | 1840 |
| 80 | Ga0207695_10087136 | 3300025913 | Bacteria | 3146 |
| 81 | Ga0207660_10232484 | 3300025917 | Unclassified | 1450 |
| 82 | Ga0207662_10138287 | 3300025918 | Bacteria | 1541 |
| 83 | Ga0207657_10008078 | 3300025919 | Bacteria | 10730 |
| 84 | Ga0207652_10005506 | 3300025921 | Bacteria | 10269 |
| 85 | Ga0207670_10035046 | 3300025936 | Bacteria | 3251 |
| 86 | Ga0207711_10001205 | 3300025941 | Bacteria | 24479 |
| 87 | Ga0207711_10052056 | 3300025941 | Bacteria | 3508 |
| 88 | Ga0207689_10077084 | 3300025942 | Bacteria | 2741 |
| 89 | Ga0207667_10061739 | 3300025949 | Bacteria | 3920 |
| 90 | Ga0207651_10038868 | 3300025960 | Bacteria | 3132 |
| 91 | Ga0207712_10005555 | 3300025961 | Bacteria | 7958 |
| 92 | Ga0207712_10009918 | 3300025961 | Bacteria | 6037 |
| 93 | Ga0207712_10027048 | 3300025961 | Bacteria | 3827 |
| 94 | Ga0207677_10099976 | 3300026023 | Bacteria | 2132 |
| 95 | Ga0207703_10141236 | 3300026035 | Bacteria | 2090 |
| 96 | Ga0207702_10079046 | 3300026078 | Bacteria | 2849 |
| 97 | Ga0207641_10001321 | 3300026088 | Bacteria | 24537 |
| 98 | Ga0207641_10030687 | 3300026088 | Bacteria | 4453 |
| 99 | Ga0207674_10007887 | 3300026116 | Bacteria | 12368 |
| 100 | Ga0207675_100015762 | 3300026118 | Bacteria | 7048 |
| 101 | Ga0207683_10042066 | 3300026121 | Bacteria | 3990 |
| 102 | Ga0207683_10062590 | 3300026121 | Bacteria | 3277 |
| 103 | Ga0207428_10013558 | 3300027907 | Bacteria | 7113 |
| 104 | Ga0268265_10000066 | 3300028380 | Bacteria | 142517 |
| 105 | Ga0268265_10154388 | 3300028380 | Bacteria | 1941 |
| 106 | Ga0265318_10010439 | 3300028577 | Bacteria | 4045 |
| 107 | Ga0307515_10093133 | 3300028794 | Bacteria | 3740 |
| 108 | Ga0265325_10011858 | 3300031241 | Bacteria | 4998 |
| 109 | Ga0265316_10062573 | 3300031344 | Bacteria | 2887 |
| 110 | Ga0307513_10067848 | 3300031456 | Unclassified | 3739 |
| 111 | Ga0265313_10001544 | 3300031595 | Bacteria | 21401 |
| 112 | Ga0307507_10028919 | 3300033179 | Bacteria | 5892 |
| 113 | Ga0373934_0029767 | 3300035086 | Bacteria | 2134 |
| 114 | Ga0373937_0094750 | 3300036401 | Bacteria | 2768 |
| 115 | Ga0395899_0039107 | 3300037312 | Bacteria | 3552 |
| 116 | Ga0395899_0050732 | 3300037312 | Bacteria | 3080 |
| 117 | Ga0395905_0034753 | 3300037471 | Bacteria | 4734 |
| 118 | Ga0451576_0012911 | 3300045051 | Bacteria | 9364 |
| 119 | Ga0495628_0163998 | 3300046516 | Bacteria | 1688 |
| 120 | Ga0496101_0132092 | 3300048904 | Bacteria | 1896 |
| 121 | Ga0496102_0041308 | 3300048905 | Bacteria | 4175 |
| 122 | Ga0496103_0034089 | 3300048906 | Bacteria | 3112 |
| 123 | Ga0496109_0019122 | 3300048912 | Bacteria | 6034 |
| 124 | Ga0496110_0007483 | 3300048913 | Bacteria | 8727 |
| 125 | Ga0496111_0165462 | 3300048914 | Bacteria | 1642 |
| 126 | Ga0496114_0055815 | 3300048917 | Bacteria | 3295 |
| 127 | Ga0496115_0217870 | 3300048918 | Bacteria | 1575 |
| 128 | Ga0496116_0000150 | 3300048919 | Bacteria | 141440 |
| 129 | Ga0496116_0002449 | 3300048919 | Bacteria | 19475 |
| 130 | Ga0496116_0058644 | 3300048919 | Bacteria | 2508 |
| 131 | Ga0496116_0070176 | 3300048919 | Bacteria | 2224 |
| 132 | Ga0496117_0010335 | 3300048920 | Bacteria | 8530 |
| 133 | Ga0496117_0015808 | 3300048920 | Bacteria | 6404 |
| 134 | Ga0496118_0010839 | 3300048921 | Bacteria | 8977 |
| 135 | Ga0496118_0080272 | 3300048921 | Bacteria | 2297 |
| 136 | Ga0496119_0003631 | 3300048922 | Bacteria | 15866 |
| 137 | Ga0496119_0018817 | 3300048922 | Bacteria | 5117 |
| 138 | Ga0496120_0034400 | 3300048923 | Bacteria | 3035 |
| 139 | Ga0496120_0049980 | 3300048923 | Bacteria | 2396 |
| 140 | Ga0496121_0042526 | 3300048924 | Bacteria | 3949 |
| 141 | Ga0496121_0049423 | 3300048924 | Bacteria | 3565 |
| 142 | Ga0496122_0005166 | 3300048925 | Bacteria | 15714 |
| 143 | Ga0496122_0089227 | 3300048925 | Bacteria | 2109 |
| 144 | Ga0496122_0142378 | 3300048925 | Bacteria | 1497 |
| 145 | Ga0496124_0023014 | 3300048927 | Bacteria | 5700 |
| 146 | Ga0496124_0043915 | 3300048927 | Bacteria | 3839 |
| 147 | Ga0496124_0099804 | 3300048927 | Bacteria | 2354 |
| 148 | Ga0496125_0002515 | 3300048928 | Bacteria | 23677 |
| 149 | Ga0496125_0005442 | 3300048928 | Bacteria | 14152 |
| 150 | Ga0496125_0029222 | 3300048928 | Bacteria | 4957 |
| 151 | Ga0496125_0171926 | 3300048928 | Bacteria | 1455 |
| 152 | Ga0496126_0049034 | 3300048929 | Bacteria | 3856 |
| 153 | Ga0501034_0032214 | 3300049571 | Bacteria | 5325 |
| 154 | Ga0501039_0043492 | 3300049575 | Bacteria | 3470 |
| 155 | Ga0501040_0146997 | 3300049576 | Unclassified | 1662 |
| 156 | Ga0501041_0036511 | 3300049577 | Unclassified | 2977 |
| 157 | Ga0501077_0056298 | 3300049593 | Unclassified | 2496 |
| 158 | Ga0501081_0031304 | 3300049743 | Unclassified | 3606 |
| 159 | nmdc:mga05p37_186372_c1 | 3300050507 | Unclassified | 2523 |
| 160 | nmdc:mga05p37_194028_c1 | 3300050507 | Unclassified | 2464 |
| 161 | nmdc:mga09592_9960_c1 | 3300050508 | Bacteria | 7733 |
| 162 | nmdc:mga0qj67_42741_c1 | 3300050509 | Bacteria | 3567 |
| 163 | nmdc:mga06r32_31985_c1 | 3300050510 | Bacteria | 4945 |
| 164 | nmdc:mga06r32_335512_c1 | 3300050510 | Unclassified | 1497 |
| 165 | nmdc:mga0n895_324641_c1 | 3300050512 | Bacteria | 1560 |
| 166 | nmdc:mga0a205_152875_c1 | 3300050515 | Bacteria | 2206 |
| 167 | Ga0500583_0032041 | 3300053092 | Bacteria | 2317 |
| 168 | Ga0500568_0000023 | 3300053139 | Bacteria | 176763 |
| 169 | Ga0501084_0128738 | 3300054114 | Unclassified | 2131 |
| 170 | 2508675781 | 2508501039 | Bacteria | 9978592 |
| 171 | 2517763870 | 2517572101 | Bacteria | 6884336 |
| 172 | 2563929391 | 2563366752 | Bacteria | 4961801 |
| 173 | 2578334886 | 2576861424 | Bacteria | 5270569 |
| 174 | 2580935388 | 2579778775 | Bacteria | 5360914 |
| 175 | 2587739059 | 2585428059 | Bacteria | 8696589 |
| 176 | 2595318864 | 2593339198 | Bacteria | 7267884 |
| 177 | 2601641174 | 2600255286 | Bacteria | 5390125 |
| 178 | 2644427559 | 2643221676 | Bacteria | 8119172 |
| 179 | 2673822241 | 2671180694 | Bacteria | 7506943 |
| 180 | 2676200894 | 2675902999 | Bacteria | 9438463 |
| 181 | 2686536042 | 2684623035 | Bacteria | 8032739 |
| 182 | 2689962674 | 2687453737 | Bacteria | 11203906 |
| 183 | 2723606668 | 2721755693 | Bacteria | 6126117 |
| 184 | 2730137260 | 2728369359 | Bacteria | 5621728 |
| 185 | 2753809012 | 2751185905 | Bacteria | 6142767 |
| 186 | 2774845472 | 2773857921 | Bacteria | 9435764 |
| 187 | 2802437664 | 2802428803 | Bacteria | 5806948 |
| 188 | 2819671830 | 2818991459 | Bacteria | 8736032 |
| 189 | 2857458293 | 2857453340 | Bacteria | 8090534 |
| 190 | 2864738180 | 2864733723 | Bacteria | 6770668 |
| 191 | 2865004382 | 2865002811 | Bacteria | 6333767 |
| 192 | 2881639121 | 2881636855 | Bacteria | 5205297 |
| 193 | 2885528334 | 2885526491 | Bacteria | 7164189 |
| 194 | 2888582423 | 2888578766 | Bacteria | 6743310 |
| 195 | 2889055321 | 2889049205 | Bacteria | 7524325 |
| 196 | 2889277214 | 2889276214 | Bacteria | 5979355 |
| 197 | 2904117656 | 2904113452 | Bacteria | 7796941 |
| 198 | 2904495927 | 2904490793 | Bacteria | 7046938 |
| 199 | 2904596068 | 2904595352 | Bacteria | 6124848 |
| 200 | 2904758747 | 2904755435 | Bacteria | 7986759 |
| 201 | 2907206404 | 2907202186 | Bacteria | 6632024 |
| 202 | 2916973341 | 2916971899 | Bacteria | 4250608 |
| 203 | 2919164800 | 2919160200 | Bacteria | 6929020 |
| 204 | 2919425934 | 2919425241 | Bacteria | 8055701 |
| 205 | 2938652077 | 2938649242 | Bacteria | 7118381 |
| 206 | 2939684324 | 2939679117 | Bacteria | 6921672 |
| 207 | 2939703195 | 2939702853 | Bacteria | 5139229 |
| 208 | 2946057736 | 2946053406 | Bacteria | 6978655 |
| 209 | 2968561414 | 2968558590 | Bacteria | 6956864 |
| 210 | 2971411231 | 2971410472 | Bacteria | 8311090 |
| 211 | 2971516790 | 2971511577 | Bacteria | 5404012 |
| 212 | 2980179091 | 2980176882 | Bacteria | 5397533 |
| 213 | 2980184703 | 2980182181 | Bacteria | 9454109 |
| 214 | 2984531199 | 2984527788 | Bacteria | 5288478 |
| 215 | 2984537308 | 2984532647 | Bacteria | 5288506 |
| 216 | 2988225842 | 2988225383 | Bacteria | 7221625 |
| 217 | 2996637197 | 2996632988 | Bacteria | 6921523 |
| 218 | 2996707839 | 2996706504 | Bacteria | 5757485 |
| 219 | 648172641 | 648028048 | Bacteria | 5394884 |
| 220 | 8002319452 | 8002317523 | Bacteria | 8051857 |
| 221 | 8002778682 | 8002775197 | Bacteria | 10728764 |
| 222 | 8002790068 | 8002784119 | Bacteria | 9788632 |
| 223 | 8046992944 | 8046991243 | Bacteria | 8497463 |
| 224 | 8054465790 | 8054465665 | Bacteria | 7323556 |
| 225 | 8055633323 | 8055632911 | Bacteria | 5283357 |
| 226 | 8056537087 | 8056533031 | Bacteria | 8964429 |
| 227 | 8057734883 | 8057733483 | Bacteria | 6578323 |
| 228 | 8057979934 | 8057977335 | Bacteria | 5694872 |
| 229 | Ga0395899_0049771 | |||
| 230 | JGI25404J52841_10000551 | |||
| 231 | Ga0055538_1000468 | |||
| 232 | Ga0055535_1002868 | |||
| 233 | JGI25405J52794_10002354 | |||
| 234 | Ga0058859_10027630 | |||
| 235 | Ga0058860_11983036 | |||
| 236 | Ga0068869_100126219 | |||
| 237 | Ga0070680_100017258 | |||
| 238 | Ga0068868_100012711 | |||
| 239 | Ga0068868_100188340 | |||
| 240 | Ga0070689_100001461 | |||
| 241 | Ga0070689_100105973 | |||
| 242 | Ga0070687_100027963 | |||
| 243 | Ga0070675_100111353 | |||
| 244 | Ga0070701_10008336 | |||
| 245 | Ga0070708_100072155 | |||
| 246 | Ga0070678_100008361 | |||
| 247 | Ga0070681_10025348 | |||
| 248 | Ga0070706_100198358 | |||
| 249 | Ga0070706_100237280 | |||
| 250 | Ga0070707_100044276 | |||
| 251 | Ga0070679_100001537 | |||
| 252 | Ga0070684_100177776 | |||
| 253 | Ga0070686_100008930 | |||
| 254 | Ga0068855_100005673 | |||
| 255 | Ga0070664_100016681 | |||
| 256 | Ga0068857_100025293 | |||
| 257 | Ga0068859_100000042 | |||
| 258 | Ga0068859_100255345 | |||
| 259 | Ga0068859_100280809 | |||
| 260 | Ga0068863_100001046 | |||
| 261 | Ga0068863_100042830 | |||
| 262 | Ga0068858_100003935 | |||
| 263 | Ga0068862_100000623 | |||
| 264 | Ga0081455_10014851 | |||
| 265 | Ga0081538_10003960 | |||
| 266 | Ga0081540_1000538 | |||
| 267 | Ga0081539_10008294 | |||
| 268 | Ga0068871_100108186 | |||
| 269 | Ga0075428_100000443 | |||
| 270 | Ga0075428_100006183 | |||
| 271 | Ga0075428_100025068 | |||
| 272 | Ga0075428_100176616 | |||
| 273 | Ga0075430_100066503 | |||
| 274 | Ga0075431_100056063 | |||
| 275 | Ga0075429_100040185 | |||
| 276 | Ga0075429_100072784 | |||
| 277 | Ga0075429_100235281 | |||
| 278 | Ga0097620_100000042 | |||
| 279 | Ga0097620_100255338 | |||
| 280 | Ga0097620_100280813 | |||
| 281 | Ga0105251_10012803 | |||
| 282 | Ga0105240_10005938 | |||
| 283 | Ga0111539_10000290 | |||
| 284 | Ga0111539_10011853 | |||
| 285 | Ga0105247_10002449 | |||
| 286 | Ga0114129_10386344 | |||
| 287 | Ga0105248_10000153 | |||
| 288 | Ga0105237_10300032 | |||
| 289 | Ga0105249_10007446 | |||
| 290 | Ga0105249_10011486 | |||
| 291 | Ga0105249_10036332 | |||
| 292 | Ga0105246_10000132 | |||
| 293 | Ga0105246_10087846 | |||
| 294 | Ga0157378_10094873 | |||
| 295 | Ga0163163_10005712 | |||
| 296 | Ga0157379_10031624 | |||
| 297 | Ga0157379_10174317 | |||
| 298 | Ga0157376_10159523 | |||
| 299 | Ga0206353_10518787 | |||
| 300 | Ga0209566_100132 | |||
| 301 | Ga0209566_100180 | |||
| 302 | Ga0209675_1007328 | |||
| 303 | Ga0209025_1000466 | |||
| 304 | Ga0207710_10012964 | |||
| 305 | Ga0207688_10063150 | |||
| 306 | Ga0207705_10155780 | |||
| 307 | Ga0207684_10176841 | |||
| 308 | Ga0207695_10087136 | |||
| 309 | Ga0207660_10232484 | |||
| 310 | Ga0207662_10138287 | |||
| 311 | Ga0207657_10008078 | |||
| 312 | Ga0207652_10005506 | |||
| 313 | Ga0207670_10035046 | |||
| 314 | Ga0207711_10001205 | |||
| 315 | Ga0207711_10052056 | |||
| 316 | Ga0207689_10077084 | |||
| 317 | Ga0207667_10061739 | |||
| 318 | Ga0207651_10038868 | |||
| 319 | Ga0207712_10005555 | |||
| 320 | Ga0207712_10009918 | |||
| 321 | Ga0207712_10027048 | |||
| 322 | Ga0207677_10099976 | |||
| 323 | Ga0207703_10141236 | |||
| 324 | Ga0207702_10079046 | |||
| 325 | Ga0207641_10001321 | |||
| 326 | Ga0207641_10030687 | |||
| 327 | Ga0207674_10007887 | |||
| 328 | Ga0207675_100015762 | |||
| 329 | Ga0207683_10042066 | |||
| 330 | Ga0207683_10062590 | |||
| 331 | Ga0207428_10013558 | |||
| 332 | Ga0268265_10000066 | |||
| 333 | Ga0268265_10154388 | |||
| 334 | Ga0265318_10010439 | |||
| 335 | Ga0307515_10093133 | |||
| 336 | Ga0265325_10011858 | |||
| 337 | Ga0265316_10062573 | |||
| 338 | Ga0307513_10067848 | |||
| 339 | Ga0265313_10001544 | |||
| 340 | Ga0307507_10028919 | |||
| 341 | Ga0373934_0029767 | |||
| 342 | Ga0373937_0094750 | |||
| 343 | Ga0395899_0039107 | |||
| 344 | Ga0395899_0050732 | |||
| 345 | Ga0395905_0034753 | |||
| 346 | Ga0451576_0012911 | |||
| 347 | Ga0495628_0163998 | |||
| 348 | Ga0496101_0132092 | |||
| 349 | Ga0496102_0041308 | |||
| 350 | Ga0496103_0034089 | |||
| 351 | Ga0496109_0019122 | |||
| 352 | Ga0496110_0007483 | |||
| 353 | Ga0496111_0165462 | |||
| 354 | Ga0496114_0055815 | |||
| 355 | Ga0496115_0217870 | |||
| 356 | Ga0496116_0000150 | |||
| 357 | Ga0496116_0002449 | |||
| 358 | Ga0496116_0058644 | |||
| 359 | Ga0496116_0070176 | |||
| 360 | Ga0496117_0010335 | |||
| 361 | Ga0496117_0015808 | |||
| 362 | Ga0496118_0010839 | |||
| 363 | Ga0496118_0080272 | |||
| 364 | Ga0496119_0003631 | |||
| 365 | Ga0496119_0018817 | |||
| 366 | Ga0496120_0034400 | |||
| 367 | Ga0496120_0049980 | |||
| 368 | Ga0496121_0042526 | |||
| 369 | Ga0496121_0049423 | |||
| 370 | Ga0496122_0005166 | |||
| 371 | Ga0496122_0089227 | |||
| 372 | Ga0496122_0142378 | |||
| 373 | Ga0496124_0023014 | |||
| 374 | Ga0496124_0043915 | |||
| 375 | Ga0496124_0099804 | |||
| 376 | Ga0496125_0002515 | |||
| 377 | Ga0496125_0005442 | |||
| 378 | Ga0496125_0029222 | |||
| 379 | Ga0496125_0171926 | |||
| 380 | Ga0496126_0049034 | |||
| 381 | Ga0501034_0032214 | |||
| 382 | Ga0501039_0043492 | |||
| 383 | Ga0501040_0146997 | |||
| 384 | Ga0501041_0036511 | |||
| 385 | Ga0501077_0056298 | |||
| 386 | Ga0501081_0031304 | |||
| 387 | nmdc:mga05p37_186372_c1 | |||
| 388 | nmdc:mga05p37_194028_c1 | |||
| 389 | nmdc:mga09592_9960_c1 | |||
| 390 | nmdc:mga0qj67_42741_c1 | |||
| 391 | nmdc:mga06r32_31985_c1 | |||
| 392 | nmdc:mga06r32_335512_c1 | |||
| 393 | nmdc:mga0n895_324641_c1 | |||
| 394 | nmdc:mga0a205_152875_c1 | |||
| 395 | Ga0500583_0032041 | |||
| 396 | Ga0500568_0000023 | |||
| 397 | Ga0501084_0128738 | |||
| 398 | 2508675781 | |||
| 399 | 2517763870 | |||
| 400 | 2563929391 | |||
| 401 | 2578334886 | |||
| 402 | 2580935388 | |||
| 403 | 2587739059 | |||
| 404 | 2595318864 | |||
| 405 | 2601641174 | |||
| 406 | 2644427559 | |||
| 407 | 2673822241 | |||
| 408 | 2676200894 | |||
| 409 | 2686536042 | |||
| 410 | 2689962674 | |||
| 411 | 2723606668 | |||
| 412 | 2730137260 | |||
| 413 | 2753809012 | |||
| 414 | 2774845472 | |||
| 415 | 2802437664 | |||
| 416 | 2819671830 | |||
| 417 | 2857458293 | |||
| 418 | 2864738180 | |||
| 419 | 2865004382 | |||
| 420 | 2881639121 | |||
| 421 | 2885528334 | |||
| 422 | 2888582423 | |||
| 423 | 2889055321 | |||
| 424 | 2889277214 | |||
| 425 | 2904117656 | |||
| 426 | 2904495927 | |||
| 427 | 2904596068 | |||
| 428 | 2904758747 | |||
| 429 | 2907206404 | |||
| 430 | 2916973341 | |||
| 431 | 2919164800 | |||
| 432 | 2919425934 | |||
| 433 | 2938652077 | |||
| 434 | 2939684324 | |||
| 435 | 2939703195 | |||
| 436 | 2946057736 | |||
| 437 | 2968561414 | |||
| 438 | 2971411231 | |||
| 439 | 2971516790 | |||
| 440 | 2980179091 | |||
| 441 | 2980184703 | |||
| 442 | 2984531199 | |||
| 443 | 2984537308 | |||
| 444 | 2988225842 | |||
| 445 | 2996637197 | |||
| 446 | 2996707839 | |||
| 447 | 648172641 | |||
| 448 | 8002319452 | |||
| 449 | 8002778682 | |||
| 450 | 8002790068 | |||
| 451 | 8046992944 | |||
| 452 | 8054465790 | |||
| 453 | 8055633323 | |||
| 454 | 8056537087 | |||
| 455 | 8057734883 | |||
| 456 | 8057979934 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7ydf-assembly1.cif.gz_A | crystal structure of human sars2 catalytic domain | 0.9572 | 94 | 395 |
| 8ffy-assembly1.cif.gz_A | cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(uga-tl) | 0.9482 | 96 | 396 |
| 7u2b-assembly1.cif.gz_A | cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(gcu-tl) | 0.9465 | 95 | 395 |
| 6rlu-assembly1.cif.gz_A | trypanosoma brucei seryl-trna synthetase in complex with 5'-o-(n-(l-seryl)-sulfamoyl)cytidine | 0.9389 | 64 | 394 |
| 6rlu-assembly1.cif.gz_B | trypanosoma brucei seryl-trna synthetase in complex with 5'-o-(n-(l-seryl)-sulfamoyl)cytidine | 0.9293 | 68 | 394 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1sryA02 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9871 | 79 | 396 | 3.30.930.10 |
| 2dq3B02 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9788 | 79 | 395 | 3.30.930.10 |
| 1sryA02 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9748 | 79 | 396 | 3.30.930.10 |
| af_P9WFT7_105_418_3.30.930.10 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9726 | 80 | 396 | 3.30.930.10 |
| af_I1JVB5_172_505_3.30.930.10 | Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 | 0.9653 | 79 | 395 | 3.30.930.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-K2F7R7-F1-model_v4 | serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) | 0.9927 | 277 | 396 |
GO:0004828
GO:0005524 GO:0005737 GO:0006434 |
| AF-A0A3M0Y109-F1-model_v4 | serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) | 0.9899 | 273 | 396 |
GO:0004828
GO:0005524 GO:0005737 GO:0006434 |
| AF-A0A3D5YGT3-F1-model_v4 | Serine--tRNA ligase (EC 6.1.1.11) | 0.9894 | 145 | 396 |
GO:0004828
GO:0005524 GO:0005737 GO:0006434 |
| AF-A0A356FA52-F1-model_v4 | serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) | 0.9892 | 202 | 396 |
GO:0004828
GO:0005524 GO:0006434 |
| AF-A0A2G9M303-F1-model_v4 | serine--tRNA ligase (EC 6.1.1.11) (Seryl-tRNA synthetase) (Seryl-tRNA(Ser/Sec) synthetase) | 0.9888 | 277 | 396 |
GO:0004828
GO:0005524 GO:0005737 GO:0006434 |