F341161

General Info

Members Datasets Scaffolds Average Seq Length
228 159 456 364

Family's Representative Sequence

Representative Sequence 3300036401|Ga0373937_0299633|Ga0373937_0299633_168_1436
Length 422
Sequence MAQESVDLFAAAAIHCNFAQSRRSARIAKRDIHRPRRAFVRQSPANPNAAAQKIIPFVDLQAQYRSISAELLAATEEVLSKCNFILGKQVADFEEEFARFAGTKHAVGVSNGLDALRIALTALNIGPGHEVILPANTYIATAFAVSAAGAKPVLVDCDPTNFNIDPAKIESAITPRTKAIMPVHLTGQAADMNPILGIGARRGLHVIEDAAQAHGALSHGRPCGSMGIAGCFSFYPGKNLGAAGDGGAVTTNDANLAARMRVFRNNGETKKYEHVEKGLNARLDTLQAAILRVKLSRLPEWNRKRNAHADRYRALLSGIDGLHLQSLIPGSTHVHHLFMVQTNHRDELKKYLEERGVQTGIHYPTPIHLQGAYADLGYKKGAFPNAEYLAPRILSIPMFAELTEEQIVYVCEQIRSFMKGRN

Samples

Sample ID Description Type Environment
1 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
54 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
84 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
85 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
86 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
87 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
88 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
89 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
90 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
93 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
94 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
95 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
96 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
99 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
100 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
101 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
104 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
105 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
107 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
109 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
110 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
117 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
121 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
122 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
143 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
154 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
155 2643221670 Streptomyces sp. Root431 Isolate Unclassified
156 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
157 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
158 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
159 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.42
Metatranscriptomes 3.95
Isolates 2.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 0
Rhizosphere 97.37
Stem 0
Stem Tuber 0
Unclassified 2.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373937_0299633 3300036401 Unclassified 1519
2 rootH2_10025402 3300003320 Bacteria 5282
3 rootL2_10012957 3300003322 Bacteria 12025
4 Ga0070676_10000699 3300005328 Bacteria 16384
5 Ga0070683_100030410 3300005329 Bacteria 4903
6 Ga0070683_100045039 3300005329 Bacteria 4072
7 Ga0070683_100346918 3300005329 Bacteria 1414
8 Ga0070670_100208197 3300005331 Bacteria 1700
9 Ga0070680_100086703 3300005336 Bacteria 2588
10 Ga0070691_10034757 3300005341 Bacteria 2373
11 Ga0070668_100035114 3300005347 Bacteria 3822
12 Ga0070669_100000010 3300005353 Bacteria 222186
13 Ga0070669_100028635 3300005353 Bacteria 4012
14 Ga0070714_100000431 3300005435 Bacteria 30383
15 Ga0070714_100221720 3300005435 Bacteria 1738
16 Ga0070701_10003284 3300005438 Bacteria 6371
17 Ga0070705_100009633 3300005440 Bacteria 4808
18 Ga0070700_100002426 3300005441 Bacteria 9493
19 Ga0070694_100012406 3300005444 Bacteria 5296
20 Ga0070681_10000187 3300005458 Bacteria 47873
21 Ga0070706_100003068 3300005467 Bacteria 16541
22 Ga0070707_100087299 3300005468 Bacteria 3017
23 Ga0070698_100061648 3300005471 Bacteria 3785
24 Ga0070698_100331900 3300005471 Unclassified 1452
25 Ga0070679_100001301 3300005530 Bacteria 22043
26 Ga0070684_100022946 3300005535 Bacteria 5212
27 Ga0068853_100046570 3300005539 Bacteria 3719
28 Ga0070693_100091081 3300005547 Bacteria 1838
29 Ga0070704_100002464 3300005549 Bacteria 10392
30 Ga0068855_100000452 3300005563 Bacteria 50694
31 Ga0068857_100001631 3300005577 Bacteria 17991
32 Ga0068857_100005079 3300005577 Bacteria 11188
33 Ga0068854_100198683 3300005578 Bacteria 1575
34 Ga0068856_100000718 3300005614 Bacteria 36014
35 Ga0068856_100013656 3300005614 Bacteria 7856
36 Ga0070702_100000153 3300005615 Bacteria 21550
37 Ga0068852_100011279 3300005616 Bacteria 6720
38 Ga0068859_100007974 3300005617 Bacteria 10742
39 Ga0068861_100054503 3300005719 Bacteria 3046
40 Ga0068863_100338659 3300005841 Bacteria 1463
41 Ga0068858_100019385 3300005842 Bacteria 6361
42 Ga0068858_100105330 3300005842 Bacteria 2631
43 Ga0097621_100000361 3300006237 Bacteria 31484
44 Ga0068871_100000121 3300006358 Bacteria 48978
45 Ga0075428_100107161 3300006844 Unclassified 3046
46 Ga0075429_100155270 3300006880 Unclassified 2004
47 Ga0097620_100007974 3300006931 Bacteria 10742
48 Ga0105240_10000046 3300009093 Bacteria 240261
49 Ga0105240_10004080 3300009093 Bacteria 22465
50 Ga0105240_10006040 3300009093 Bacteria 17900
51 Ga0105240_10062219 3300009093 Bacteria 4647
52 Ga0114129_10023607 3300009147 Bacteria 8716
53 Ga0114129_10084844 3300009147 Bacteria 4396
54 Ga0114129_10104456 3300009147 Bacteria 3915
55 Ga0114129_10121118 3300009147 Bacteria 3601
56 Ga0105241_10007218 3300009174 Bacteria 8178
57 Ga0105237_10133410 3300009545 Bacteria 2478
58 Ga0105238_10000385 3300009551 Bacteria 47232
59 Ga0105238_10037773 3300009551 Bacteria 4907
60 Ga0105238_10063645 3300009551 Bacteria 3689
61 Ga0157371_10145341 3300013102 Bacteria 1689
62 Ga0157369_10000314 3300013105 Bacteria 65179
63 Ga0157374_10000175 3300013296 Bacteria 59394
64 Ga0157374_10000682 3300013296 Bacteria 29939
65 Ga0157378_10000449 3300013297 Bacteria 39557
66 Ga0163162_10019030 3300013306 Bacteria 6734
67 Ga0163162_10019424 3300013306 Bacteria 6665
68 Ga0157372_10000603 3300013307 Bacteria 39204
69 Ga0157380_10013423 3300014326 Bacteria 5972
70 Ga0157376_10131770 3300014969 Bacteria 2232
71 Ga0182006_1002734 3300015261 Bacteria 9451
72 Ga0206351_10083850 3300020077 Bacteria 1936
73 Ga0206350_10199496 3300020080 Bacteria 2518
74 Ga0206353_11541966 3300020082 Bacteria 1840
75 Ga0224712_10000378 3300022467 Bacteria 8619
76 Ga0224712_10000558 3300022467 Bacteria 7549
77 Ga0207645_10000703 3300025907 Bacteria 27863
78 Ga0207684_10002358 3300025910 Bacteria 19121
79 Ga0207654_10139729 3300025911 Bacteria 1543
80 Ga0207654_10150711 3300025911 Bacteria 1492
81 Ga0207707_10011585 3300025912 Bacteria 7678
82 Ga0207695_10000074 3300025913 Bacteria 311994
83 Ga0207695_10025932 3300025913 Bacteria 6550
84 Ga0207695_10154293 3300025913 Bacteria 2232
85 Ga0207695_10286115 3300025913 Bacteria 1541
86 Ga0207660_10067596 3300025917 Bacteria 2589
87 Ga0207652_10007844 3300025921 Bacteria 8569
88 Ga0207646_10263929 3300025922 Bacteria 1556
89 Ga0207681_10000011 3300025923 Bacteria 366878
90 Ga0207694_10002981 3300025924 Bacteria 13582
91 Ga0207694_10024627 3300025924 Bacteria 4571
92 Ga0207694_10055675 3300025924 Bacteria 3070
93 Ga0207650_10176449 3300025925 Bacteria 1701
94 Ga0207664_10002759 3300025929 Bacteria 11663
95 Ga0207704_10025756 3300025938 Bacteria 3215
96 Ga0207679_10219918 3300025945 Bacteria 1597
97 Ga0207667_10001828 3300025949 Bacteria 26767
98 Ga0207667_10159091 3300025949 Unclassified 2324
99 Ga0207640_10155276 3300025981 Bacteria 1686
100 Ga0207703_10016210 3300026035 Bacteria 5808
101 Ga0207639_10033883 3300026041 Bacteria 3771
102 Ga0207702_10000695 3300026078 Bacteria 36308
103 Ga0207702_10031724 3300026078 Bacteria 4405
104 Ga0207674_10016195 3300026116 Bacteria 8166
105 Ga0207698_10014005 3300026142 Bacteria 5312
106 Ga0207428_10004284 3300027907 Bacteria 13648
107 Ga0265319_1000032 3300028563 Bacteria 119321
108 Ga0265334_10053312 3300028573 Bacteria 1545
109 Ga0265318_10005515 3300028577 Bacteria 5936
110 Ga0265323_10003379 3300028653 Bacteria 7063
111 Ga0265322_10000270 3300028654 Bacteria 22101
112 Ga0314311_1032492 3300030733 Bacteria 5087
113 Ga0265330_10007718 3300031235 Bacteria 5225
114 Ga0265320_10015478 3300031240 Bacteria 4310
115 Ga0265325_10000526 3300031241 Bacteria 27633
116 Ga0265325_10003690 3300031241 Bacteria 9914
117 Ga0265339_10004486 3300031249 Bacteria 9515
118 Ga0265331_10059253 3300031250 Bacteria 1811
119 Ga0265327_10000023 3300031251 Bacteria 382703
120 Ga0265316_10014687 3300031344 Bacteria 6878
121 Ga0265316_10030716 3300031344 Bacteria 4400
122 Ga0265316_10046397 3300031344 Bacteria 3443
123 Ga0265313_10000301 3300031595 Bacteria 53562
124 Ga0265313_10015409 3300031595 Bacteria 4452
125 Ga0307508_10000283 3300031616 Bacteria 62443
126 Ga0316575_10041572 3300031665 Bacteria 1819
127 Ga0316579_10028066 3300031691 Bacteria 2561
128 Ga0265314_10002302 3300031711 Bacteria 19739
129 Ga0265342_10009674 3300031712 Bacteria 6761
130 Ga0265342_10038777 3300031712 Bacteria 2900
131 Ga0316576_10124501 3300031727 Bacteria 1936
132 Ga0316578_10009701 3300031728 Bacteria 4959
133 Ga0316577_10001792 3300031733 Bacteria 10369
134 Ga0316577_10044406 3300031733 Bacteria 2485
135 Ga0307416_100003061 3300032002 Bacteria 9771
136 Ga0316585_10000119 3300032137 Bacteria 14858
137 Ga0316580_10000601 3300032139 Bacteria 8437
138 Ga0316580_10037409 3300032139 Bacteria 1501
139 Ga0316592_1000212 3300033524 Bacteria 7129
140 Ga0316588_1000026 3300033528 Bacteria 10897
141 Ga0316596_1000001 3300033541 Bacteria 27655
142 Ga0316574_0005229 3300035398 Bacteria 6902
143 Ga0316582_0016078 3300036647 Bacteria 4295
144 Ga0316584_0007422 3300036712 Bacteria 7494
145 Ga0395899_0060055 3300037312 Bacteria 2801
146 Ga0395900_0246737 3300037418 Bacteria 1789
147 Ga0316581_0012877 3300037588 Bacteria 2363
148 Ga0395901_0197614 3300038443 Bacteria 2108
149 Ga0436361_0997150 3300039447 Bacteria 20731
150 Ga0451577_0001555 3300042876 Bacteria 30103
151 Ga0453683_0005161 3300044673 Bacteria 9150
152 Ga0453684_0000289 3300044712 Bacteria 215476
153 Ga0453684_0025498 3300044712 Bacteria 8580
154 Ga0453684_0032082 3300044712 Bacteria 7362
155 Ga0451576_0008195 3300045051 Bacteria 12302
156 Ga0451576_0014569 3300045051 Bacteria 8739
157 Ga0451576_0517236 3300045051 Bacteria 1254
158 Ga0495669_0077016 3300046684 Bacteria 1527
159 Ga0495613_0049940 3300046689 Bacteria 3086
160 Ga0495684_0062627 3300047471 Bacteria 2829
161 Ga0501032_0000339 3300049569 Bacteria 39056
162 Ga0501032_0025751 3300049569 Bacteria 4054
163 Ga0501032_0042953 3300049569 Bacteria 3064
164 Ga0501033_0002780 3300049570 Bacteria 14670
165 Ga0501033_0003021 3300049570 Bacteria 14040
166 Ga0501034_0006315 3300049571 Bacteria 12760
167 Ga0501034_0031709 3300049571 Bacteria 5367
168 Ga0501034_0032368 3300049571 Bacteria 5311
169 Ga0501034_0127075 3300049571 Bacteria 2534
170 Ga0501037_0008815 3300049573 Bacteria 7392
171 Ga0501037_0021628 3300049573 Bacteria 4755
172 Ga0501038_0130772 3300049574 Bacteria 2061
173 Ga0501038_0278806 3300049574 Bacteria 1316
174 Ga0501039_0017140 3300049575 Bacteria 5555
175 Ga0501039_0069459 3300049575 Bacteria 2736
176 Ga0501040_0068029 3300049576 Bacteria 2456
177 Ga0501042_0075443 3300049578 Bacteria 2413
178 Ga0501043_0000285 3300049579 Bacteria 45721
179 Ga0501043_0089005 3300049579 Bacteria 2426
180 Ga0501043_0212036 3300049579 Bacteria 1501
181 Ga0501046_0013407 3300049580 Bacteria 6940
182 Ga0501046_0017583 3300049580 Bacteria 5963
183 Ga0501046_0025159 3300049580 Bacteria 4875
184 Ga0501046_0070049 3300049580 Bacteria 2727
185 Ga0501047_0002079 3300049581 Bacteria 19160
186 Ga0501047_0088715 3300049581 Bacteria 2969
187 Ga0501047_0165172 3300049581 Bacteria 2084
188 Ga0501047_0378259 3300049581 Bacteria 1251
189 Ga0501048_0036384 3300049582 Bacteria 3539
190 Ga0501048_0046852 3300049582 Bacteria 3086
191 Ga0501067_0032476 3300049583 Bacteria 2898
192 Ga0501069_0004730 3300049585 Bacteria 7041
193 Ga0501070_0136261 3300049586 Bacteria 2027
194 Ga0501072_0089583 3300049588 Bacteria 2442
195 Ga0501073_0011725 3300049589 Bacteria 6399
196 Ga0501073_0098495 3300049589 Bacteria 2030
197 Ga0501074_0021437 3300049590 Bacteria 4691
198 Ga0501074_0030303 3300049590 Bacteria 3920
199 Ga0501079_0375757 3300049741 Bacteria 1114
200 Ga0501080_0062025 3300049742 Bacteria 3479
201 Ga0501080_0107135 3300049742 Bacteria 2590
202 Ga0501081_0085781 3300049743 Bacteria 2210
203 Ga0501083_0001360 3300049744 Bacteria 16618
204 Ga0501083_0007071 3300049744 Bacteria 7964
205 Ga0501035_0000394 3300049822 Bacteria 49952
206 Ga0501044_0000204 3300049823 Bacteria 75175
207 Ga0501044_0039726 3300049823 Bacteria 4906
208 Ga0501044_0136910 3300049823 Bacteria 2440
209 nmdc:mga05p37_123271_c1 3300050507 Bacteria 3183
210 nmdc:mga05p37_18182_c1 3300050507 Bacteria 8494
211 nmdc:mga05p37_28031_c1 3300050507 Bacteria 6862
212 nmdc:mga08y16_3210_c1 3300050511 Bacteria 16913
213 Ga0500643_019338 3300053087 Bacteria 2243
214 Ga0501084_0026735 3300054114 Bacteria 4818
215 Ga0501084_0052436 3300054114 Bacteria 3413
216 Ga0501084_0093077 3300054114 Bacteria 2530
217 Ga0501084_0234434 3300054114 Bacteria 1549
218 Ga0587091_002372 3300059511 Bacteria 2222
219 Ga0501082_0097581 3300060353 Bacteria 2540
220 Ga0501082_0099284 3300060353 Bacteria 2517
221 Ga0501082_0250533 3300060353 Bacteria 1541
222 Ga0530510_0140049 3300061734 Unclassified 1782
223 2520878264 2519899754 Bacteria 5336938
224 2644385872 2643221670 Bacteria 6497041
225 2817415289 2816332280 Bacteria 5109718
226 2919193479 2919191525 Bacteria 5765973
227 8054311877 8054307821 Bacteria 5212224
228 8055420913 8055419101 Bacteria 5289643
229 Ga0373937_0299633
230 rootH2_10025402
231 rootL2_10012957
232 Ga0070676_10000699
233 Ga0070683_100030410
234 Ga0070683_100045039
235 Ga0070683_100346918
236 Ga0070670_100208197
237 Ga0070680_100086703
238 Ga0070691_10034757
239 Ga0070668_100035114
240 Ga0070669_100000010
241 Ga0070669_100028635
242 Ga0070714_100000431
243 Ga0070714_100221720
244 Ga0070701_10003284
245 Ga0070705_100009633
246 Ga0070700_100002426
247 Ga0070694_100012406
248 Ga0070681_10000187
249 Ga0070706_100003068
250 Ga0070707_100087299
251 Ga0070698_100061648
252 Ga0070698_100331900
253 Ga0070679_100001301
254 Ga0070684_100022946
255 Ga0068853_100046570
256 Ga0070693_100091081
257 Ga0070704_100002464
258 Ga0068855_100000452
259 Ga0068857_100001631
260 Ga0068857_100005079
261 Ga0068854_100198683
262 Ga0068856_100000718
263 Ga0068856_100013656
264 Ga0070702_100000153
265 Ga0068852_100011279
266 Ga0068859_100007974
267 Ga0068861_100054503
268 Ga0068863_100338659
269 Ga0068858_100019385
270 Ga0068858_100105330
271 Ga0097621_100000361
272 Ga0068871_100000121
273 Ga0075428_100107161
274 Ga0075429_100155270
275 Ga0097620_100007974
276 Ga0105240_10000046
277 Ga0105240_10004080
278 Ga0105240_10006040
279 Ga0105240_10062219
280 Ga0114129_10023607
281 Ga0114129_10084844
282 Ga0114129_10104456
283 Ga0114129_10121118
284 Ga0105241_10007218
285 Ga0105237_10133410
286 Ga0105238_10000385
287 Ga0105238_10037773
288 Ga0105238_10063645
289 Ga0157371_10145341
290 Ga0157369_10000314
291 Ga0157374_10000175
292 Ga0157374_10000682
293 Ga0157378_10000449
294 Ga0163162_10019030
295 Ga0163162_10019424
296 Ga0157372_10000603
297 Ga0157380_10013423
298 Ga0157376_10131770
299 Ga0182006_1002734
300 Ga0206351_10083850
301 Ga0206350_10199496
302 Ga0206353_11541966
303 Ga0224712_10000378
304 Ga0224712_10000558
305 Ga0207645_10000703
306 Ga0207684_10002358
307 Ga0207654_10139729
308 Ga0207654_10150711
309 Ga0207707_10011585
310 Ga0207695_10000074
311 Ga0207695_10025932
312 Ga0207695_10154293
313 Ga0207695_10286115
314 Ga0207660_10067596
315 Ga0207652_10007844
316 Ga0207646_10263929
317 Ga0207681_10000011
318 Ga0207694_10002981
319 Ga0207694_10024627
320 Ga0207694_10055675
321 Ga0207650_10176449
322 Ga0207664_10002759
323 Ga0207704_10025756
324 Ga0207679_10219918
325 Ga0207667_10001828
326 Ga0207667_10159091
327 Ga0207640_10155276
328 Ga0207703_10016210
329 Ga0207639_10033883
330 Ga0207702_10000695
331 Ga0207702_10031724
332 Ga0207674_10016195
333 Ga0207698_10014005
334 Ga0207428_10004284
335 Ga0265319_1000032
336 Ga0265334_10053312
337 Ga0265318_10005515
338 Ga0265323_10003379
339 Ga0265322_10000270
340 Ga0314311_1032492
341 Ga0265330_10007718
342 Ga0265320_10015478
343 Ga0265325_10000526
344 Ga0265325_10003690
345 Ga0265339_10004486
346 Ga0265331_10059253
347 Ga0265327_10000023
348 Ga0265316_10014687
349 Ga0265316_10030716
350 Ga0265316_10046397
351 Ga0265313_10000301
352 Ga0265313_10015409
353 Ga0307508_10000283
354 Ga0316575_10041572
355 Ga0316579_10028066
356 Ga0265314_10002302
357 Ga0265342_10009674
358 Ga0265342_10038777
359 Ga0316576_10124501
360 Ga0316578_10009701
361 Ga0316577_10001792
362 Ga0316577_10044406
363 Ga0307416_100003061
364 Ga0316585_10000119
365 Ga0316580_10000601
366 Ga0316580_10037409
367 Ga0316592_1000212
368 Ga0316588_1000026
369 Ga0316596_1000001
370 Ga0316574_0005229
371 Ga0316582_0016078
372 Ga0316584_0007422
373 Ga0395899_0060055
374 Ga0395900_0246737
375 Ga0316581_0012877
376 Ga0395901_0197614
377 Ga0436361_0997150
378 Ga0451577_0001555
379 Ga0453683_0005161
380 Ga0453684_0000289
381 Ga0453684_0025498
382 Ga0453684_0032082
383 Ga0451576_0008195
384 Ga0451576_0014569
385 Ga0451576_0517236
386 Ga0495669_0077016
387 Ga0495613_0049940
388 Ga0495684_0062627
389 Ga0501032_0000339
390 Ga0501032_0025751
391 Ga0501032_0042953
392 Ga0501033_0002780
393 Ga0501033_0003021
394 Ga0501034_0006315
395 Ga0501034_0031709
396 Ga0501034_0032368
397 Ga0501034_0127075
398 Ga0501037_0008815
399 Ga0501037_0021628
400 Ga0501038_0130772
401 Ga0501038_0278806
402 Ga0501039_0017140
403 Ga0501039_0069459
404 Ga0501040_0068029
405 Ga0501042_0075443
406 Ga0501043_0000285
407 Ga0501043_0089005
408 Ga0501043_0212036
409 Ga0501046_0013407
410 Ga0501046_0017583
411 Ga0501046_0025159
412 Ga0501046_0070049
413 Ga0501047_0002079
414 Ga0501047_0088715
415 Ga0501047_0165172
416 Ga0501047_0378259
417 Ga0501048_0036384
418 Ga0501048_0046852
419 Ga0501067_0032476
420 Ga0501069_0004730
421 Ga0501070_0136261
422 Ga0501072_0089583
423 Ga0501073_0011725
424 Ga0501073_0098495
425 Ga0501074_0021437
426 Ga0501074_0030303
427 Ga0501079_0375757
428 Ga0501080_0062025
429 Ga0501080_0107135
430 Ga0501081_0085781
431 Ga0501083_0001360
432 Ga0501083_0007071
433 Ga0501035_0000394
434 Ga0501044_0000204
435 Ga0501044_0039726
436 Ga0501044_0136910
437 nmdc:mga05p37_123271_c1
438 nmdc:mga05p37_18182_c1
439 nmdc:mga05p37_28031_c1
440 nmdc:mga08y16_3210_c1
441 Ga0500643_019338
442 Ga0501084_0026735
443 Ga0501084_0052436
444 Ga0501084_0093077
445 Ga0501084_0234434
446 Ga0587091_002372
447 Ga0501082_0097581
448 Ga0501082_0099284
449 Ga0501082_0250533
450 Ga0530510_0140049
451 2520878264
452 2644385872
453 2817415289
454 2919193479
455 8054311877
456 8055420913

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

65

415

0.98

PF00155

Aminotran_1_2

Aminotransferase class I and II

61

365

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nys-assembly1.cif.gz_A x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas aeruginosa in complex with plp at 1.45 angstrom resolution 0.9805 6 366
7b0d-assembly1.cif.gz_B sugar transaminase from archaeoglobus veneficus 0.9787 5 371
3nu7-assembly1.cif.gz_A wbpe, an aminotransferase from pseudomonas aeruginosa involved in o-antigen assembly in complex with the cofactor pmp 0.9783 6 365
5u24-assembly2.cif.gz_D x-ray structure of the wlarg aminotransferase from campylobacter jejuni, k184a mutant in complex with tdp-fuc3n 0.9773 6 366
8e75-assembly1.cif.gz_A crystal structure of pcryo_0616, the aminotransferase required to synthesize udp-n-acetyl-3-amino-d-glucosaminuronic acid (udp-glcnac3na) 0.9746 12 364
ID Description Score Start End Superfamily
2ogeD01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9747 5 251 3.40.640.10
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9714 6 251 3.40.640.10
2ogeD01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9627 5 251 3.40.640.10
2ogaB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9625 254 372 3.90.1150.10
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9594 6 251 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A7V8WD87-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9917 20 255 GO:0000271
GO:0008483
GO:0030170
AF-A0A2E5LGJ0-F1-model_v4 Erythromycin biosynthesis sensory transduction protein eryC1 0.9902 6 369 GO:0000271
GO:0008483
GO:0030170
AF-A0A382AQM5-F1-model_v4 Uncharacterized protein 0.9892 6 253 GO:0000271
GO:0008483
GO:0030170
AF-A0A2W0BLJ4-F1-model_v4 Erythromycin biosynthesis sensory transduction protein eryC1 0.9891 6 265 GO:0000271
GO:0008483
GO:0030170
AF-A0A3N5FN74-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9885 5 366 GO:0000271
GO:0008483
GO:0030170

Map