F340779

General Info

Members Datasets Scaffolds Average Seq Length
228 180 456 542

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100025968|Ga0068852_1000259683
Length 637
Sequence MEPRLAVATNTRAHSSRINSVRSDSVPRSKSRFGTSDFAIPFATKRRRKLLQHYCNYTPRSVETFAKSQASRARIRDTVSSDPLVGYIWIVSTRSMQPSNQPHAWNALKKHYASIRKVHLRKLFSQDPERGNRLTAEALGIYLDYSKNRITDETLRLLLQLAEESGLRGKIDAMFRGDKINLTENRSVLHVALRAPKGASIFVDGQDVVPGVHAVLDKMASFSSQVRSGDWNGHTGKAIRNVINVGIGGSDLGPVMAYEALRHYSQRDLTFRFVSNVDGTDFAEAVQDLDPAETLFIISSKTFTTLETMTNAHTARAWSLSGLNGDETSVAKHFVAVSTNAKEVAKFGIDTANMFEFWDWVGGRYSMDSAIGLSTMIAIGPDNFRSMLDGFHQMDEHFRQTPLDRNLPVLMGLLTVWYADFFGSQTVAILPYEQYLKRFPAYLQQLTMESNGKHVTLDGTPVAHDTSPVYWGEPGTNGQHSFYQLIHQGTHLIPCDFIAFAKPLNPLGRHHDILLANVFAQAEALAFGKTARKVKAEGTPDWLVPHRVFEGNRPSNTLLAERLTPEVLGKLIALYEHSVFTQSVVWNIDAFDQWGVELGKVLAQRIVPELENKEEPKLAHDSSTNSLIRRYRKLKST

Samples

Sample ID Description Type Environment
1 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
66 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
67 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
98 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
101 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
106 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
113 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
123 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
124 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
125 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
128 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
133 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
139 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
140 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
141 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
152 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
153 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
160 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
161 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
162 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
163 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
164 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
165 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
166 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
167 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
168 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
169 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
170 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
171 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
172 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
173 2643221670 Streptomyces sp. Root431 Isolate Unclassified
174 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
175 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
176 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
177 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
178 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
179 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
180 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.3
Metatranscriptomes 0.44
Isolates 5.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.7
Nodule 0
Rhizoplane 5.26
Rhizosphere 86.84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068852_100025968 3300005616 Bacteria 4754
2 LJNas_1001494 3300000546 Bacteria 3306
3 JGI24738J21930_10011094 3300002075 Bacteria 1990
4 Ga0055539_1000284 3300003752 Bacteria 28851
5 Ga0065704_10104475 3300005289 Bacteria 2139
6 Ga0070658_10032942 3300005327 Bacteria 4167
7 Ga0070676_10006713 3300005328 Bacteria 6165
8 Ga0070683_100003020 3300005329 Bacteria 13516
9 Ga0070683_100035398 3300005329 Bacteria 4565
10 Ga0070690_100032793 3300005330 Bacteria 3246
11 Ga0068869_100069613 3300005334 Bacteria 2602
12 Ga0070660_100023937 3300005339 Bacteria 4529
13 Ga0070689_100012607 3300005340 Bacteria 6095
14 Ga0070687_100018295 3300005343 Bacteria 3239
15 Ga0070675_100005730 3300005354 Bacteria 9502
16 Ga0070671_100012175 3300005355 Bacteria 6923
17 Ga0070671_100154434 3300005355 Bacteria 1939
18 Ga0070688_100010025 3300005365 Bacteria 5206
19 Ga0070659_100009342 3300005366 Bacteria 7201
20 Ga0070667_100080582 3300005367 Bacteria 2785
21 Ga0070714_100122898 3300005435 Bacteria 2311
22 Ga0070710_10028790 3300005437 Bacteria 2974
23 Ga0070711_100053802 3300005439 Bacteria 2775
24 Ga0070705_100025176 3300005440 Bacteria 3223
25 Ga0070662_100021997 3300005457 Bacteria 4359
26 Ga0070662_100068674 3300005457 Bacteria 2606
27 Ga0070706_100013294 3300005467 Bacteria 7614
28 Ga0070706_100022998 3300005467 Bacteria 5741
29 Ga0070707_100004564 3300005468 Bacteria 12964
30 Ga0070698_100211358 3300005471 Bacteria 1874
31 Ga0070684_100008302 3300005535 Bacteria 8113
32 Ga0070684_100019864 3300005535 Bacteria 5566
33 Ga0070684_100135754 3300005535 Bacteria 2222
34 Ga0070697_100016270 3300005536 Bacteria 5849
35 Ga0068853_100072918 3300005539 Bacteria 2993
36 Ga0070672_100000165 3300005543 Bacteria 36528
37 Ga0070693_100002531 3300005547 Bacteria 8427
38 Ga0070704_100013506 3300005549 Bacteria 5068
39 Ga0068855_100004806 3300005563 Bacteria 16491
40 Ga0068855_100007781 3300005563 Bacteria 12947
41 Ga0070664_100008853 3300005564 Bacteria 8157
42 Ga0068857_100000545 3300005577 Bacteria 27421
43 Ga0068857_100010272 3300005577 Bacteria 8137
44 Ga0068854_100003751 3300005578 Bacteria 9499
45 Ga0068852_100014335 3300005616 Bacteria 6098
46 Ga0068863_100006731 3300005841 Bacteria 11269
47 Ga0068863_100098402 3300005841 Bacteria 2778
48 Ga0068858_100027933 3300005842 Bacteria 5243
49 Ga0081455_10004390 3300005937 Bacteria 15885
50 Ga0081455_10009669 3300005937 Bacteria 9890
51 Ga0081540_1024252 3300005983 Bacteria 3524
52 Ga0070717_10026976 3300006028 Bacteria 4588
53 Ga0070717_10074856 3300006028 Bacteria 2831
54 Ga0075368_10006711 3300006042 Bacteria 4038
55 Ga0070712_100012721 3300006175 Bacteria 5357
56 Ga0075367_10007794 3300006178 Bacteria 5507
57 Ga0075428_100145592 3300006844 Bacteria 2575
58 Ga0075430_100084237 3300006846 Bacteria 2663
59 Ga0075431_100058058 3300006847 Bacteria 3991
60 Ga0075433_10006116 3300006852 Bacteria 9482
61 Ga0075433_10071234 3300006852 Bacteria 3056
62 Ga0075434_100015168 3300006871 Bacteria 7383
63 Ga0075434_100020334 3300006871 Bacteria 6437
64 Ga0075434_100035204 3300006871 Bacteria 4949
65 Ga0075434_100108733 3300006871 Bacteria 2783
66 Ga0075435_100094209 3300007076 Bacteria 2475
67 Ga0105240_10026502 3300009093 Bacteria 7606
68 Ga0114129_10017437 3300009147 Bacteria 10224
69 Ga0114129_10070817 3300009147 Bacteria 4863
70 Ga0114129_10186775 3300009147 Bacteria 2816
71 Ga0105241_10003694 3300009174 Bacteria 11371
72 Ga0105241_10015244 3300009174 Bacteria 5629
73 Ga0105241_10049441 3300009174 Bacteria 3202
74 Ga0105242_10001348 3300009176 Bacteria 19388
75 Ga0105248_10002471 3300009177 Bacteria 20542
76 Ga0105237_10131387 3300009545 Bacteria 2498
77 Ga0105238_10005964 3300009551 Bacteria 12078
78 Ga0105238_10020303 3300009551 Bacteria 6763
79 Ga0105238_10040308 3300009551 Bacteria 4733
80 Ga0105239_10007382 3300010375 Bacteria 12622
81 Ga0105239_10046146 3300010375 Bacteria 4774
82 Ga0157374_10083117 3300013296 Bacteria 3042
83 Ga0157374_10165490 3300013296 Bacteria 2155
84 Ga0163162_10159574 3300013306 Bacteria 2376
85 Ga0157372_10021447 3300013307 Bacteria 6980
86 Ga0157372_10041956 3300013307 Bacteria 5059
87 Ga0157375_10011269 3300013308 Bacteria 7891
88 Ga0182008_10002136 3300014497 Bacteria 12605
89 Ga0157379_10008264 3300014968 Bacteria 9044
90 Ga0182007_10001633 3300015262 Bacteria 11886
91 Ga0209759_1000458 3300025256 Bacteria 46338
92 Ga0207697_10000197 3300025315 Bacteria 32111
93 Ga0207692_10010519 3300025898 Bacteria 3903
94 Ga0207692_10034456 3300025898 Bacteria 2452
95 Ga0207647_10007190 3300025904 Bacteria 8065
96 Ga0207647_10023263 3300025904 Bacteria 4101
97 Ga0207645_10017675 3300025907 Bacteria 4702
98 Ga0207684_10000956 3300025910 Bacteria 32546
99 Ga0207695_10007688 3300025913 Bacteria 13653
100 Ga0207671_10000240 3300025914 Bacteria 82502
101 Ga0207693_10013840 3300025915 Bacteria 6497
102 Ga0207693_10021540 3300025915 Bacteria 5121
103 Ga0207663_10014761 3300025916 Bacteria 4290
104 Ga0207663_10018079 3300025916 Bacteria 3941
105 Ga0207662_10020555 3300025918 Bacteria 3768
106 Ga0207662_10082848 3300025918 Bacteria 1960
107 Ga0207657_10021096 3300025919 Bacteria 6138
108 Ga0207694_10000535 3300025924 Bacteria 34484
109 Ga0207694_10011199 3300025924 Bacteria 6771
110 Ga0207694_10093065 3300025924 Bacteria 2380
111 Ga0207659_10007635 3300025926 Bacteria 6672
112 Ga0207700_10013360 3300025928 Bacteria 5339
113 Ga0207690_10119333 3300025932 Bacteria 1913
114 Ga0207706_10026605 3300025933 Bacteria 5178
115 Ga0207665_10045886 3300025939 Bacteria 2927
116 Ga0207691_10001617 3300025940 Bacteria 22376
117 Ga0207711_10031652 3300025941 Bacteria 4467
118 Ga0207689_10034537 3300025942 Bacteria 4200
119 Ga0207689_10100437 3300025942 Bacteria 2377
120 Ga0207661_10023774 3300025944 Bacteria 4635
121 Ga0207679_10032522 3300025945 Bacteria 3663
122 Ga0207667_10002350 3300025949 Bacteria 23704
123 Ga0207703_10007855 3300026035 Bacteria 8437
124 Ga0207639_10063494 3300026041 Bacteria 2860
125 Ga0207708_10012470 3300026075 Bacteria 6335
126 Ga0207641_10016432 3300026088 Bacteria 6060
127 Ga0207641_10036102 3300026088 Bacteria 4124
128 Ga0207674_10003509 3300026116 Bacteria 19152
129 Ga0207683_10023012 3300026121 Bacteria 5355
130 Ga0207683_10122966 3300026121 Bacteria 2331
131 Ga0207698_10084472 3300026142 Bacteria 2574
132 Ga0209813_10002419 3300027866 Bacteria 4272
133 Ga0209974_10013095 3300027876 Bacteria 2765
134 Ga0307513_10034716 3300031456 Bacteria 5654
135 Ga0265313_10026257 3300031595 Bacteria 3070
136 Ga0265314_10014600 3300031711 Bacteria 6270
137 Ga0373955_0028104 3300035172 Bacteria 2914
138 Ga0373925_0080828 3300037068 Bacteria 2471
139 Ga0395898_0013889 3300037466 Bacteria 8276
140 Ga0436360_1266684 3300039438 Bacteria 2286
141 Ga0439457_001850 3300042014 Bacteria 6242
142 Ga0466967_0012629 3300045976 Bacteria 6476
143 Ga0495603_0016993 3300046455 Bacteria 4402
144 Ga0495629_0007878 3300046459 Bacteria 7839
145 Ga0495629_0008858 3300046459 Bacteria 7398
146 Ga0495629_0017408 3300046459 Bacteria 5150
147 Ga0495629_0041490 3300046459 Bacteria 3238
148 Ga0495641_0029093 3300046461 Bacteria 2665
149 Ga0495651_0025090 3300046462 Bacteria 4639
150 Ga0495580_0005788 3300046472 Bacteria 10147
151 Ga0495594_0005244 3300046499 Bacteria 6663
152 Ga0495630_0000022 3300046517 Bacteria 172932
153 Ga0495666_0015475 3300046526 Bacteria 3797
154 Ga0495652_0049143 3300046529 Bacteria 3612
155 Ga0495586_0000222 3300046535 Bacteria 37841
156 Ga0495587_0079452 3300046536 Bacteria 1902
157 Ga0495622_0016628 3300046557 Bacteria 3427
158 Ga0495588_0010811 3300046674 Bacteria 4262
159 Ga0495657_0088304 3300046675 Bacteria 1993
160 Ga0495647_0006239 3300046681 Bacteria 3940
161 Ga0495613_0001173 3300046689 Bacteria 19990
162 Ga0495581_0026405 3300047315 Bacteria 3366
163 Ga0495636_0017177 3300047318 Bacteria 2895
164 Ga0495674_0012813 3300047319 Bacteria 7894
165 Ga0495676_0011683 3300047321 Bacteria 7918
166 Ga0495676_0014683 3300047321 Bacteria 7001
167 Ga0495687_026561 3300047443 Bacteria 2723
168 Ga0495675_0036129 3300047444 Bacteria 3153
169 Ga0495675_0046522 3300047444 Bacteria 2762
170 Ga0495684_0004883 3300047471 Bacteria 10459
171 Ga0495684_0008556 3300047471 Bacteria 7924
172 Ga0495686_0002746 3300047472 Bacteria 16083
173 Ga0495686_0014402 3300047472 Bacteria 5443
174 Ga0495614_0000173 3300048089 Bacteria 23764
175 Ga0496102_0098280 3300048905 Bacteria 2716
176 Ga0496102_0119547 3300048905 Bacteria 2460
177 Ga0496104_0072603 3300048907 Bacteria 3273
178 Ga0496105_0047130 3300048908 Bacteria 3557
179 Ga0496106_0016570 3300048909 Bacteria 5453
180 Ga0496107_0054536 3300048910 Bacteria 2885
181 Ga0496108_0012272 3300048911 Bacteria 6968
182 Ga0496109_0000444 3300048912 Bacteria 35601
183 Ga0496109_0050730 3300048912 Bacteria 3778
184 Ga0496110_0058399 3300048913 Bacteria 3398
185 Ga0496111_0035896 3300048914 Bacteria 3544
186 Ga0496112_0016877 3300048915 Bacteria 6850
187 Ga0501032_0001712 3300049569 Bacteria 17347
188 Ga0501033_0014926 3300049570 Bacteria 5897
189 Ga0501037_0005244 3300049573 Bacteria 9424
190 Ga0501038_0006044 3300049574 Bacteria 11206
191 Ga0501071_0112760 3300049587 Bacteria 2011
192 Ga0501079_0057044 3300049741 Bacteria 3014
193 Ga0501035_0001290 3300049822 Bacteria 25869
194 Ga0501044_0000024 3300049823 Bacteria 194302
195 nmdc:mga0k408_11054_c1 3300050493 Bacteria 4903
196 nmdc:mga06z11_3481_c1 3300050494 Bacteria 6096
197 nmdc:mga04h51_2417_c1 3300050495 Bacteria 4428
198 nmdc:mga05p37_128007_c1 3300050507 Bacteria 3117
199 nmdc:mga09592_102362_c1 3300050508 Bacteria 2454
200 nmdc:mga0qj67_149115_c1 3300050509 Bacteria 1897
201 nmdc:mga08y16_10556_c1 3300050511 Bacteria 9694
202 nmdc:mga0n895_111728_c1 3300050512 Bacteria 2749
203 nmdc:mga0n895_15751_c1 3300050512 Bacteria 6910
204 nmdc:mga0n895_29578_c1 3300050512 Bacteria 5227
205 nmdc:mga0n895_71837_c1 3300050512 Bacteria 3432
206 nmdc:mga0n895_9269_c1 3300050512 Bacteria 8601
207 nmdc:mga0rr50_78881_c1 3300050513 Bacteria 2535
208 nmdc:mga0a205_39316_c1 3300050515 Bacteria 4553
209 Ga0495612_0027565 3300053078 Bacteria 2285
210 Ga0500635_0000071 3300053080 Bacteria 67355
211 Ga0500566_0063103 3300053094 Bacteria 2093
212 Ga0500652_033027 3300053131 Bacteria 2043
213 Ga0500658_0035851 3300053134 Bacteria 1965
214 Ga0500561_0000402 3300053137 Bacteria 7126
215 Ga0500634_0003736 3300053161 Bacteria 6869
216 Ga0587077_004499 3300059493 Bacteria 1837
217 2585298662 2582581312 Bacteria 7308206
218 2585311858 2582581314 Bacteria 11452267
219 2616899236 2616644941 Bacteria 8510691
220 2643945351 2643221587 Bacteria 7586415
221 2644387571 2643221670 Bacteria 6497041
222 2644432250 2643221677 Bacteria 7584031
223 2862291565 2862290372 Bacteria 7471434
224 2912759331 2912757875 Bacteria 7940295
225 2918503005 2918501144 Bacteria 8668083
226 8025482284 8025478263 Bacteria 8209203
227 8054163495 8054160619 Bacteria 7783213
228 8056452227 8056447290 Bacteria 7680491
229 Ga0068852_100025968
230 LJNas_1001494
231 JGI24738J21930_10011094
232 Ga0055539_1000284
233 Ga0065704_10104475
234 Ga0070658_10032942
235 Ga0070676_10006713
236 Ga0070683_100003020
237 Ga0070683_100035398
238 Ga0070690_100032793
239 Ga0068869_100069613
240 Ga0070660_100023937
241 Ga0070689_100012607
242 Ga0070687_100018295
243 Ga0070675_100005730
244 Ga0070671_100012175
245 Ga0070671_100154434
246 Ga0070688_100010025
247 Ga0070659_100009342
248 Ga0070667_100080582
249 Ga0070714_100122898
250 Ga0070710_10028790
251 Ga0070711_100053802
252 Ga0070705_100025176
253 Ga0070662_100021997
254 Ga0070662_100068674
255 Ga0070706_100013294
256 Ga0070706_100022998
257 Ga0070707_100004564
258 Ga0070698_100211358
259 Ga0070684_100008302
260 Ga0070684_100019864
261 Ga0070684_100135754
262 Ga0070697_100016270
263 Ga0068853_100072918
264 Ga0070672_100000165
265 Ga0070693_100002531
266 Ga0070704_100013506
267 Ga0068855_100004806
268 Ga0068855_100007781
269 Ga0070664_100008853
270 Ga0068857_100000545
271 Ga0068857_100010272
272 Ga0068854_100003751
273 Ga0068852_100014335
274 Ga0068863_100006731
275 Ga0068863_100098402
276 Ga0068858_100027933
277 Ga0081455_10004390
278 Ga0081455_10009669
279 Ga0081540_1024252
280 Ga0070717_10026976
281 Ga0070717_10074856
282 Ga0075368_10006711
283 Ga0070712_100012721
284 Ga0075367_10007794
285 Ga0075428_100145592
286 Ga0075430_100084237
287 Ga0075431_100058058
288 Ga0075433_10006116
289 Ga0075433_10071234
290 Ga0075434_100015168
291 Ga0075434_100020334
292 Ga0075434_100035204
293 Ga0075434_100108733
294 Ga0075435_100094209
295 Ga0105240_10026502
296 Ga0114129_10017437
297 Ga0114129_10070817
298 Ga0114129_10186775
299 Ga0105241_10003694
300 Ga0105241_10015244
301 Ga0105241_10049441
302 Ga0105242_10001348
303 Ga0105248_10002471
304 Ga0105237_10131387
305 Ga0105238_10005964
306 Ga0105238_10020303
307 Ga0105238_10040308
308 Ga0105239_10007382
309 Ga0105239_10046146
310 Ga0157374_10083117
311 Ga0157374_10165490
312 Ga0163162_10159574
313 Ga0157372_10021447
314 Ga0157372_10041956
315 Ga0157375_10011269
316 Ga0182008_10002136
317 Ga0157379_10008264
318 Ga0182007_10001633
319 Ga0209759_1000458
320 Ga0207697_10000197
321 Ga0207692_10010519
322 Ga0207692_10034456
323 Ga0207647_10007190
324 Ga0207647_10023263
325 Ga0207645_10017675
326 Ga0207684_10000956
327 Ga0207695_10007688
328 Ga0207671_10000240
329 Ga0207693_10013840
330 Ga0207693_10021540
331 Ga0207663_10014761
332 Ga0207663_10018079
333 Ga0207662_10020555
334 Ga0207662_10082848
335 Ga0207657_10021096
336 Ga0207694_10000535
337 Ga0207694_10011199
338 Ga0207694_10093065
339 Ga0207659_10007635
340 Ga0207700_10013360
341 Ga0207690_10119333
342 Ga0207706_10026605
343 Ga0207665_10045886
344 Ga0207691_10001617
345 Ga0207711_10031652
346 Ga0207689_10034537
347 Ga0207689_10100437
348 Ga0207661_10023774
349 Ga0207679_10032522
350 Ga0207667_10002350
351 Ga0207703_10007855
352 Ga0207639_10063494
353 Ga0207708_10012470
354 Ga0207641_10016432
355 Ga0207641_10036102
356 Ga0207674_10003509
357 Ga0207683_10023012
358 Ga0207683_10122966
359 Ga0207698_10084472
360 Ga0209813_10002419
361 Ga0209974_10013095
362 Ga0307513_10034716
363 Ga0265313_10026257
364 Ga0265314_10014600
365 Ga0373955_0028104
366 Ga0373925_0080828
367 Ga0395898_0013889
368 Ga0436360_1266684
369 Ga0439457_001850
370 Ga0466967_0012629
371 Ga0495603_0016993
372 Ga0495629_0007878
373 Ga0495629_0008858
374 Ga0495629_0017408
375 Ga0495629_0041490
376 Ga0495641_0029093
377 Ga0495651_0025090
378 Ga0495580_0005788
379 Ga0495594_0005244
380 Ga0495630_0000022
381 Ga0495666_0015475
382 Ga0495652_0049143
383 Ga0495586_0000222
384 Ga0495587_0079452
385 Ga0495622_0016628
386 Ga0495588_0010811
387 Ga0495657_0088304
388 Ga0495647_0006239
389 Ga0495613_0001173
390 Ga0495581_0026405
391 Ga0495636_0017177
392 Ga0495674_0012813
393 Ga0495676_0011683
394 Ga0495676_0014683
395 Ga0495687_026561
396 Ga0495675_0036129
397 Ga0495675_0046522
398 Ga0495684_0004883
399 Ga0495684_0008556
400 Ga0495686_0002746
401 Ga0495686_0014402
402 Ga0495614_0000173
403 Ga0496102_0098280
404 Ga0496102_0119547
405 Ga0496104_0072603
406 Ga0496105_0047130
407 Ga0496106_0016570
408 Ga0496107_0054536
409 Ga0496108_0012272
410 Ga0496109_0000444
411 Ga0496109_0050730
412 Ga0496110_0058399
413 Ga0496111_0035896
414 Ga0496112_0016877
415 Ga0501032_0001712
416 Ga0501033_0014926
417 Ga0501037_0005244
418 Ga0501038_0006044
419 Ga0501071_0112760
420 Ga0501079_0057044
421 Ga0501035_0001290
422 Ga0501044_0000024
423 nmdc:mga0k408_11054_c1
424 nmdc:mga06z11_3481_c1
425 nmdc:mga04h51_2417_c1
426 nmdc:mga05p37_128007_c1
427 nmdc:mga09592_102362_c1
428 nmdc:mga0qj67_149115_c1
429 nmdc:mga08y16_10556_c1
430 nmdc:mga0n895_111728_c1
431 nmdc:mga0n895_15751_c1
432 nmdc:mga0n895_29578_c1
433 nmdc:mga0n895_71837_c1
434 nmdc:mga0n895_9269_c1
435 nmdc:mga0rr50_78881_c1
436 nmdc:mga0a205_39316_c1
437 Ga0495612_0027565
438 Ga0500635_0000071
439 Ga0500566_0063103
440 Ga0500652_033027
441 Ga0500658_0035851
442 Ga0500561_0000402
443 Ga0500634_0003736
444 Ga0587077_004499
445 2585298662
446 2585311858
447 2616899236
448 2643945351
449 2644387571
450 2644432250
451 2862291565
452 2912759331
453 2918503005
454 8025482284
455 8054163495
456 8056452227

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00342

PGI

Phosphoglucose isomerase

144

628

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7oyl-assembly1.cif.gz_A phosphoglucose isomerase of aspergillus fumigatus in complexed with glucose-6-phosphate 0.9639 4 548
4wmj-assembly1.cif.gz_B colias eurytheme phosphoglucose isomerase. homodimer from 4-5(18) genotype. 0.9636 12 549
2wu8-assembly1.cif.gz_A-2 structural studies of phosphoglucose isomerase from mycobacterium tuberculosis h37rv 0.9629 11 548
3nbu-assembly3.cif.gz_F crystal structure of pgi glucosephosphate isomerase 0.9619 10 547
1n8t-assembly1.cif.gz_A the crystal structure of phosphoglucose isomerase from rabbit muscle 0.9612 13 548
ID Description Score Start End Superfamily
af_P34795_296_509_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9566 300 506 3.40.50.10490
af_A8DZE4_100_294_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9478 106 299 3.40.50.10490
2wu8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.942 11 509 3.40.50.10490
2wu8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9361 11 509 3.40.50.10490
af_A8DZE4_100_294_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9338 106 299 3.40.50.10490
ID Description Score Start End GO Terms
AF-A0A2V8L3S6-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.9815 16 136 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-A0A6P2C7J6-F1-model_v4 Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) 0.98 10 547 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-I4VLF4-F1-model_v4 Glucose-6-phosphate isomerase (GPI) (EC 5.3.1.9) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) 0.98 11 548 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-A0A534X790-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.9798 11 365 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-A0A3B8PWG3-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.9795 62 548 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367

Map