F340668

General Info

Members Datasets Scaffolds Average Seq Length
228 175 456 466

Family's Representative Sequence

Representative Sequence 3300005347|Ga0070668_100031820|Ga0070668_1000318203
Length 558
Sequence VLRLWNFRRGLVDDAGKAEARLAIKGRDEVALAPGDHALIPRRHAASGDVDGAGDTVWVAIWLKMRAKRSASACGRLCALPHHPPAAKRHAIMRYVSTRGQAPSLDFENVTLAGLAADGGLYVPESWPVLGRDAIAALAGLSYVETAVAIMRPFVHGALDDAALRGLCEAAYGSFAHDAVTPLVQLDGRHWLLELFHGPTLAFKDVALQLLGLLFERFLSSRETHLTVVGATSGDTGSAAIEALAGRAKVDVFMLHPAGRVSEVQRRQMTTVIADNVHNIAIEGSFDDAQAMVKAMFADPVFAGRFAVSAVNSINWARLMAQVVYYFYAAVRLGAPGRAVAFSVPTGNFGDVFAGYVAAKMGLPVAKLIVATNVNDILHRALSAGDYSVGRVTPTAAPSMDIQISSNFERLLFDMHGRDGAALAEAMRGFDASKNLAIPAAMRARVAGLFTSARIDADRMNAAMRWAADRADEVIDPHSAIGLAAAQDAALPADVPVVTLATAHPAKFPDAVEAATGRRPSLPPRLADLFGKEERYVTLPATFGDVTRYIAQRATPKP

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
100 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
101 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
102 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
103 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
104 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
107 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
118 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
119 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
122 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
131 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
132 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
133 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
134 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
135 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
136 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
137 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
138 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
139 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
140 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
144 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
147 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
148 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
149 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
150 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
151 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
152 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
155 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
156 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
157 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
158 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
159 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
160 2643221580 Devosia sp. Root635 Isolate Unclassified
161 2643221629 Devosia sp. Root105 Isolate Unclassified
162 2643221662 Devosia sp. Root413D1 Isolate Unclassified
163 2643221674 Devosia sp. Root436 Isolate Unclassified
164 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
165 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
166 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
167 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
168 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
169 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
170 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
171 2932401849 Devosia sp. 2618 Isolate Rhizosphere
172 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
173 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
174 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
175 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.54
Metatranscriptomes 0
Isolates 7.46

Biome Distribution

Category Percentage (%)
Aerial Root 1.32
Bulb 0
Endosphere 11.84
Nodule 0
Rhizoplane 0.44
Rhizosphere 77.63
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100031820 3300005347 Bacteria 4014
2 JGI24736J21556_1003460 3300001904 Bacteria 2740
3 JGI24741J21665_1000122 3300001915 Bacteria 20977
4 JGI24740J21852_10006780 3300001979 Bacteria 4708
5 JGI24739J22299_10000391 3300001989 Bacteria 15156
6 JGI24739J22299_10002595 3300001989 Bacteria 6962
7 JGI24737J22298_10003712 3300001990 Bacteria 5375
8 JGI24737J22298_10015186 3300001990 Bacteria 2493
9 JGI24735J21928_10012122 3300002067 Bacteria 2726
10 JGI24738J21930_10001521 3300002075 Bacteria 6422
11 JGI24738J21930_10003810 3300002075 Bacteria 3770
12 JGI24738J21930_10009431 3300002075 Bacteria 2195
13 Ga0070658_10053714 3300005327 Bacteria 3271
14 Ga0070676_10000289 3300005328 Bacteria 22271
15 Ga0068869_100000384 3300005334 Bacteria 23974
16 Ga0070666_10031587 3300005335 Bacteria 3496
17 Ga0068868_100000204 3300005338 Bacteria 40051
18 Ga0070661_100012666 3300005344 Bacteria 5901
19 Ga0070661_100042880 3300005344 Bacteria 3304
20 Ga0070671_100019766 3300005355 Bacteria 5486
21 Ga0070673_100000005 3300005364 Bacteria 193513
22 Ga0070659_100175437 3300005366 Bacteria 1757
23 Ga0070667_100000051 3300005367 Bacteria 155117
24 Ga0070667_100018553 3300005367 Bacteria 5772
25 Ga0070663_100011840 3300005455 Bacteria 5495
26 Ga0068853_100000592 3300005539 Bacteria 24848
27 Ga0068853_100004542 3300005539 Bacteria 10771
28 Ga0070693_100133848 3300005547 Bacteria 1553
29 Ga0068855_100014262 3300005563 Bacteria 9573
30 Ga0068855_100161612 3300005563 Bacteria 2541
31 Ga0068857_100015528 3300005577 Bacteria 6653
32 Ga0068857_100077260 3300005577 Bacteria 2970
33 Ga0068859_100063014 3300005617 Bacteria 3738
34 Ga0068859_100178948 3300005617 Bacteria 2203
35 Ga0068861_100118424 3300005719 Bacteria 2133
36 Ga0068851_10038188 3300005834 Bacteria 2408
37 Ga0068863_100000028 3300005841 Bacteria 181662
38 Ga0068863_100030231 3300005841 Bacteria 5174
39 Ga0068858_100011742 3300005842 Bacteria 8262
40 Ga0068860_100041902 3300005843 Bacteria 4374
41 Ga0068860_100084988 3300005843 Bacteria 3010
42 Ga0068860_100090222 3300005843 Bacteria 2919
43 Ga0068862_100000125 3300005844 Bacteria 89536
44 Ga0075368_10000511 3300006042 Bacteria 11558
45 Ga0075367_10002351 3300006178 Bacteria 8600
46 Ga0075366_10022575 3300006195 Bacteria 3662
47 Ga0068865_100002849 3300006881 Bacteria 10303
48 Ga0097620_100063015 3300006931 Bacteria 3738
49 Ga0097620_100178952 3300006931 Bacteria 2203
50 Ga0105240_10041923 3300009093 Bacteria 5837
51 Ga0105240_10190480 3300009093 Bacteria 2412
52 Ga0105245_10024224 3300009098 Bacteria 5329
53 Ga0105247_10030162 3300009101 Bacteria 3287
54 Ga0105242_10006888 3300009176 Bacteria 8766
55 Ga0105237_10150708 3300009545 Bacteria 2322
56 Ga0105238_10010098 3300009551 Bacteria 9464
57 Ga0105249_10000015 3300009553 Bacteria 282138
58 Ga0105239_10240485 3300010375 Bacteria 2032
59 Ga0105239_10266519 3300010375 Bacteria 1926
60 Ga0105246_10002482 3300011119 Bacteria 11146
61 Ga0157369_10030572 3300013105 Bacteria 5939
62 Ga0157378_10001202 3300013297 Bacteria 23503
63 Ga0157372_10044235 3300013307 Bacteria 4934
64 Ga0157375_10001217 3300013308 Bacteria 22181
65 Ga0157376_10021374 3300014969 Bacteria 5026
66 Ga0163161_10186744 3300017792 Bacteria 1591
67 Ga0209675_1000493 3300025291 Bacteria 29684
68 Ga0209257_1001960 3300025304 Bacteria 22197
69 Ga0207656_10048957 3300025321 Bacteria 1821
70 Ga0207680_10000742 3300025903 Bacteria 15362
71 Ga0207647_10007511 3300025904 Bacteria 7870
72 Ga0207647_10020874 3300025904 Bacteria 4384
73 Ga0207645_10005023 3300025907 Bacteria 9694
74 Ga0207705_10000432 3300025909 Bacteria 36515
75 Ga0207705_10008629 3300025909 Bacteria 7428
76 Ga0207654_10004872 3300025911 Bacteria 6794
77 Ga0207695_10001846 3300025913 Bacteria 33222
78 Ga0207695_10050202 3300025913 Bacteria 4390
79 Ga0207671_10001516 3300025914 Bacteria 26700
80 Ga0207671_10063843 3300025914 Bacteria 2737
81 Ga0207657_10000947 3300025919 Bacteria 30759
82 Ga0207657_10002286 3300025919 Bacteria 20777
83 Ga0207657_10037957 3300025919 Bacteria 4295
84 Ga0207652_10046827 3300025921 Bacteria 3692
85 Ga0207681_10071982 3300025923 Bacteria 2413
86 Ga0207681_10088507 3300025923 Bacteria 2205
87 Ga0207694_10004681 3300025924 Bacteria 10650
88 Ga0207694_10036581 3300025924 Bacteria 3768
89 Ga0207644_10005238 3300025931 Bacteria 8465
90 Ga0207644_10114949 3300025931 Bacteria 2040
91 Ga0207690_10097155 3300025932 Bacteria 2095
92 Ga0207706_10089876 3300025933 Bacteria 2700
93 Ga0207686_10000931 3300025934 Bacteria 17505
94 Ga0207709_10020421 3300025935 Bacteria 3736
95 Ga0207704_10000034 3300025938 Bacteria 98810
96 Ga0207689_10001468 3300025942 Bacteria 22582
97 Ga0207667_10013944 3300025949 Bacteria 9183
98 Ga0207667_10023696 3300025949 Bacteria 6757
99 Ga0207651_10000010 3300025960 Bacteria 193754
100 Ga0207712_10000023 3300025961 Bacteria 282081
101 Ga0207668_10098298 3300025972 Bacteria 2168
102 Ga0207640_10127796 3300025981 Bacteria 1832
103 Ga0207658_10000057 3300025986 Bacteria 124003
104 Ga0207677_10000021 3300026023 Bacteria 131828
105 Ga0207703_10127517 3300026035 Bacteria 2193
106 Ga0207639_10001166 3300026041 Bacteria 17838
107 Ga0207639_10002093 3300026041 Bacteria 13434
108 Ga0207639_10002807 3300026041 Bacteria 11688
109 Ga0207639_10033251 3300026041 Bacteria 3802
110 Ga0207678_10000427 3300026067 Bacteria 38170
111 Ga0207702_10001692 3300026078 Bacteria 21793
112 Ga0207702_10003972 3300026078 Bacteria 13278
113 Ga0207641_10000014 3300026088 Bacteria 336170
114 Ga0207641_10004020 3300026088 Bacteria 12834
115 Ga0207648_10007287 3300026089 Bacteria 10902
116 Ga0207676_10000297 3300026095 Bacteria 42653
117 Ga0207674_10040670 3300026116 Bacteria 4814
118 Ga0207674_10047785 3300026116 Bacteria 4384
119 Ga0207674_10097956 3300026116 Bacteria 2916
120 Ga0207698_10008913 3300026142 Bacteria 6361
121 Ga0209813_10000036 3300027866 Bacteria 58545
122 Ga0268265_10000049 3300028380 Bacteria 177242
123 Ga0268264_10002225 3300028381 Bacteria 17207
124 Ga0268264_10109724 3300028381 Bacteria 2415
125 Ga0307513_10010183 3300031456 Bacteria 11821
126 Ga0307408_100006152 3300031548 Bacteria 7968
127 Ga0307413_10027329 3300031824 Bacteria 3160
128 Ga0307406_10010388 3300031901 Bacteria 5248
129 Ga0307416_100239223 3300032002 Bacteria 1758
130 Ga0307414_10042182 3300032004 Bacteria 3098
131 Ga0307414_10159594 3300032004 Bacteria 1789
132 Ga0307411_10016683 3300032005 Bacteria 4161
133 Ga0436364_1126870 3300037853 Bacteria 43496
134 Ga0237819_00241 3300038705 Bacteria 19890
135 Ga0400483_119891 3300039062 Bacteria 4214
136 Ga0400483_226877 3300039062 Bacteria 11014
137 Ga0439465_0026610 3300041413 Bacteria 1830
138 Ga0439448_0003717 3300042005 Bacteria 4250
139 Ga0451577_0117255 3300042876 Bacteria 2385
140 Ga0495627_000304 3300046453 Bacteria 48657
141 Ga0495638_0000014 3300046460 Bacteria 417060
142 Ga0495583_0000136 3300046506 Bacteria 123872
143 Ga0495632_0001751 3300046519 Bacteria 17558
144 Ga0495648_0000095 3300046524 Bacteria 110324
145 Ga0495648_0005345 3300046524 Bacteria 10700
146 Ga0495633_0020991 3300046558 Bacteria 3273
147 Ga0495625_0007283 3300046660 Bacteria 9677
148 Ga0495671_0000152 3300046692 Bacteria 60286
149 Ga0495687_038444 3300047443 Bacteria 2124
150 Ga0495673_0000063 3300047469 Bacteria 225912
151 Ga0496108_0001530 3300048911 Bacteria 18310
152 Ga0496117_0006317 3300048920 Bacteria 12056
153 Ga0496118_0001479 3300048921 Bacteria 35188
154 Ga0496121_0000930 3300048924 Bacteria 52952
155 Ga0496121_0063596 3300048924 Bacteria 3014
156 Ga0496122_0000359 3300048925 Bacteria 97927
157 Ga0496123_0001254 3300048926 Bacteria 36600
158 Ga0496126_0021453 3300048929 Bacteria 6307
159 Ga0496126_0087753 3300048929 Bacteria 2741
160 Ga0501292_000001 3300049515 Bacteria 211592
161 Ga0501294_000344 3300049517 Bacteria 5661
162 Ga0501032_0010761 3300049569 Bacteria 6586
163 Ga0501032_0058948 3300049569 Bacteria 2577
164 Ga0501033_0006412 3300049570 Bacteria 9213
165 Ga0501034_0005714 3300049571 Bacteria 13523
166 Ga0501034_0008496 3300049571 Bacteria 10845
167 Ga0501034_0029015 3300049571 Bacteria 5625
168 Ga0501034_0064163 3300049571 Bacteria 3687
169 Ga0501037_0015212 3300049573 Bacteria 5661
170 Ga0501037_0077313 3300049573 Bacteria 2415
171 Ga0501038_0031711 3300049574 Bacteria 4668
172 Ga0501043_0004789 3300049579 Bacteria 10963
173 Ga0501047_0000944 3300049581 Bacteria 29428
174 Ga0501047_0012183 3300049581 Bacteria 8140
175 Ga0501047_0032273 3300049581 Bacteria 5054
176 Ga0501223_000167 3300049663 Bacteria 17078
177 Ga0501224_000022 3300049664 Bacteria 64882
178 Ga0501233_000127 3300049668 Bacteria 10469
179 Ga0501235_001519 3300049669 Bacteria 4966
180 Ga0501257_000383 3300049686 Bacteria 8575
181 Ga0501259_002644 3300049688 Bacteria 2883
182 Ga0501261_000230 3300049690 Bacteria 7711
183 Ga0501225_0000235 3300049705 Bacteria 17243
184 Ga0501279_000001 3300049775 Bacteria 299671
185 Ga0501280_000041 3300049776 Bacteria 37942
186 Ga0501282_000267 3300049778 Bacteria 6316
187 Ga0501035_0039293 3300049822 Bacteria 4282
188 Ga0501044_0014279 3300049823 Bacteria 8574
189 Ga0501044_0035592 3300049823 Bacteria 5213
190 Ga0501226_000363 3300049853 Bacteria 6598
191 nmdc:mga0yw44_12174_c1 3300050492 Bacteria 4473
192 nmdc:mga06z11_13202_c1 3300050494 Bacteria 3618
193 nmdc:mga06z11_522_c1 3300050494 Bacteria 14199
194 nmdc:mga04h51_136_c1 3300050495 Bacteria 21531
195 Ga0500643_000350 3300053087 Bacteria 36659
196 Ga0500643_001417 3300053087 Bacteria 13861
197 Ga0500643_006294 3300053087 Bacteria 4981
198 Ga0500643_025412 3300053087 Bacteria 1868
199 Ga0500594_0002072 3300053118 Bacteria 4330
200 Ga0500597_000407 3300053120 Bacteria 8971
201 Ga0500608_011073 3300053122 Bacteria 3901
202 Ga0500559_0000972 3300053136 Bacteria 17928
203 Ga0500559_0053279 3300053136 Bacteria 1790
204 Ga0500604_0001487 3300053151 Bacteria 6554
205 Ga0500616_0021844 3300053153 Bacteria 3580
206 Ga0500624_000012 3300053157 Bacteria 165895
207 Ga0500624_000075 3300053157 Bacteria 56822
208 Ga0500627_0021063 3300053158 Bacteria 2625
209 Ga0500637_0000049 3300053178 Bacteria 43426
210 Ga0500645_003805 3300053730 Bacteria 5994
211 Ga0500661_000202 3300055283 Bacteria 10540
212 2512644022 2512564014 Bacteria 4639632
213 2643909703 2643221580 Bacteria 3816678
214 2644168902 2643221629 Bacteria 5850260
215 2644347453 2643221662 Bacteria 5851492
216 2644413614 2643221674 Bacteria 3919126
217 2778126673 2775507255 Bacteria 3945731
218 2809064800 2808606401 Bacteria 4586670
219 2809080767 2808606404 Bacteria 4652788
220 2809085132 2808606405 Bacteria 4586632
221 2880521829 2880518877 Bacteria 5012590
222 2919712673 2919709256 Bacteria 4318106
223 2928029738 2928027323 Bacteria 4382488
224 2932404451 2932401849 Bacteria 4262978
225 2984556703 2984555340 Bacteria 4247089
226 2984565124 2984564862 Bacteria 4339992
227 2993356200 2993356040 Bacteria 4247105
228 8054563856 8054563764 Bacteria 5592885
229 Ga0070668_100031820
230 JGI24736J21556_1003460
231 JGI24741J21665_1000122
232 JGI24740J21852_10006780
233 JGI24739J22299_10000391
234 JGI24739J22299_10002595
235 JGI24737J22298_10003712
236 JGI24737J22298_10015186
237 JGI24735J21928_10012122
238 JGI24738J21930_10001521
239 JGI24738J21930_10003810
240 JGI24738J21930_10009431
241 Ga0070658_10053714
242 Ga0070676_10000289
243 Ga0068869_100000384
244 Ga0070666_10031587
245 Ga0068868_100000204
246 Ga0070661_100012666
247 Ga0070661_100042880
248 Ga0070671_100019766
249 Ga0070673_100000005
250 Ga0070659_100175437
251 Ga0070667_100000051
252 Ga0070667_100018553
253 Ga0070663_100011840
254 Ga0068853_100000592
255 Ga0068853_100004542
256 Ga0070693_100133848
257 Ga0068855_100014262
258 Ga0068855_100161612
259 Ga0068857_100015528
260 Ga0068857_100077260
261 Ga0068859_100063014
262 Ga0068859_100178948
263 Ga0068861_100118424
264 Ga0068851_10038188
265 Ga0068863_100000028
266 Ga0068863_100030231
267 Ga0068858_100011742
268 Ga0068860_100041902
269 Ga0068860_100084988
270 Ga0068860_100090222
271 Ga0068862_100000125
272 Ga0075368_10000511
273 Ga0075367_10002351
274 Ga0075366_10022575
275 Ga0068865_100002849
276 Ga0097620_100063015
277 Ga0097620_100178952
278 Ga0105240_10041923
279 Ga0105240_10190480
280 Ga0105245_10024224
281 Ga0105247_10030162
282 Ga0105242_10006888
283 Ga0105237_10150708
284 Ga0105238_10010098
285 Ga0105249_10000015
286 Ga0105239_10240485
287 Ga0105239_10266519
288 Ga0105246_10002482
289 Ga0157369_10030572
290 Ga0157378_10001202
291 Ga0157372_10044235
292 Ga0157375_10001217
293 Ga0157376_10021374
294 Ga0163161_10186744
295 Ga0209675_1000493
296 Ga0209257_1001960
297 Ga0207656_10048957
298 Ga0207680_10000742
299 Ga0207647_10007511
300 Ga0207647_10020874
301 Ga0207645_10005023
302 Ga0207705_10000432
303 Ga0207705_10008629
304 Ga0207654_10004872
305 Ga0207695_10001846
306 Ga0207695_10050202
307 Ga0207671_10001516
308 Ga0207671_10063843
309 Ga0207657_10000947
310 Ga0207657_10002286
311 Ga0207657_10037957
312 Ga0207652_10046827
313 Ga0207681_10071982
314 Ga0207681_10088507
315 Ga0207694_10004681
316 Ga0207694_10036581
317 Ga0207644_10005238
318 Ga0207644_10114949
319 Ga0207690_10097155
320 Ga0207706_10089876
321 Ga0207686_10000931
322 Ga0207709_10020421
323 Ga0207704_10000034
324 Ga0207689_10001468
325 Ga0207667_10013944
326 Ga0207667_10023696
327 Ga0207651_10000010
328 Ga0207712_10000023
329 Ga0207668_10098298
330 Ga0207640_10127796
331 Ga0207658_10000057
332 Ga0207677_10000021
333 Ga0207703_10127517
334 Ga0207639_10001166
335 Ga0207639_10002093
336 Ga0207639_10002807
337 Ga0207639_10033251
338 Ga0207678_10000427
339 Ga0207702_10001692
340 Ga0207702_10003972
341 Ga0207641_10000014
342 Ga0207641_10004020
343 Ga0207648_10007287
344 Ga0207676_10000297
345 Ga0207674_10040670
346 Ga0207674_10047785
347 Ga0207674_10097956
348 Ga0207698_10008913
349 Ga0209813_10000036
350 Ga0268265_10000049
351 Ga0268264_10002225
352 Ga0268264_10109724
353 Ga0307513_10010183
354 Ga0307408_100006152
355 Ga0307413_10027329
356 Ga0307406_10010388
357 Ga0307416_100239223
358 Ga0307414_10042182
359 Ga0307414_10159594
360 Ga0307411_10016683
361 Ga0436364_1126870
362 Ga0237819_00241
363 Ga0400483_119891
364 Ga0400483_226877
365 Ga0439465_0026610
366 Ga0439448_0003717
367 Ga0451577_0117255
368 Ga0495627_000304
369 Ga0495638_0000014
370 Ga0495583_0000136
371 Ga0495632_0001751
372 Ga0495648_0000095
373 Ga0495648_0005345
374 Ga0495633_0020991
375 Ga0495625_0007283
376 Ga0495671_0000152
377 Ga0495687_038444
378 Ga0495673_0000063
379 Ga0496108_0001530
380 Ga0496117_0006317
381 Ga0496118_0001479
382 Ga0496121_0000930
383 Ga0496121_0063596
384 Ga0496122_0000359
385 Ga0496123_0001254
386 Ga0496126_0021453
387 Ga0496126_0087753
388 Ga0501292_000001
389 Ga0501294_000344
390 Ga0501032_0010761
391 Ga0501032_0058948
392 Ga0501033_0006412
393 Ga0501034_0005714
394 Ga0501034_0008496
395 Ga0501034_0029015
396 Ga0501034_0064163
397 Ga0501037_0015212
398 Ga0501037_0077313
399 Ga0501038_0031711
400 Ga0501043_0004789
401 Ga0501047_0000944
402 Ga0501047_0012183
403 Ga0501047_0032273
404 Ga0501223_000167
405 Ga0501224_000022
406 Ga0501233_000127
407 Ga0501235_001519
408 Ga0501257_000383
409 Ga0501259_002644
410 Ga0501261_000230
411 Ga0501225_0000235
412 Ga0501279_000001
413 Ga0501280_000041
414 Ga0501282_000267
415 Ga0501035_0039293
416 Ga0501044_0014279
417 Ga0501044_0035592
418 Ga0501226_000363
419 nmdc:mga0yw44_12174_c1
420 nmdc:mga06z11_13202_c1
421 nmdc:mga06z11_522_c1
422 nmdc:mga04h51_136_c1
423 Ga0500643_000350
424 Ga0500643_001417
425 Ga0500643_006294
426 Ga0500643_025412
427 Ga0500594_0002072
428 Ga0500597_000407
429 Ga0500608_011073
430 Ga0500559_0000972
431 Ga0500559_0053279
432 Ga0500604_0001487
433 Ga0500616_0021844
434 Ga0500624_000012
435 Ga0500624_000075
436 Ga0500627_0021063
437 Ga0500637_0000049
438 Ga0500645_003805
439 Ga0500661_000202
440 2512644022
441 2643909703
442 2644168902
443 2644347453
444 2644413614
445 2778126673
446 2809064800
447 2809080767
448 2809085132
449 2880521829
450 2919712673
451 2928029738
452 2932404451
453 2984556703
454 2984565124
455 2993356200
456 8054563856

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14821

Thr_synth_N

Threonine synthase N terminus

94

172

0.99

PF00291

PALP

Pyridoxal-phosphate dependent enzyme

175

503

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4f4f-assembly2.cif.gz_B x-ray crystal structure of plp bound threonine synthase from brucella melitensis 0.9422 1 462
4f4f-assembly2.cif.gz_B x-ray crystal structure of plp bound threonine synthase from brucella melitensis 0.9344 1 462
1vb3-assembly1.cif.gz_A crystal structure of threonine synthase from escherichia coli 0.9235 1 460
1vb3-assembly1.cif.gz_A crystal structure of threonine synthase from escherichia coli 0.9173 1 460
1kl7-assembly2.cif.gz_B crystal structure of threonine synthase from yeast 0.9147 2 460
ID Description Score Start End Superfamily
4f4fB01 Alpha Beta;Alpha-Beta Complex;threonine synthase, domain 1, chain A;Threonine synthase, N-terminal domain 0.97 1 86 3.90.1380.10
4f4fB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9595 87 430 3.40.50.1100
4f4fB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9555 87 430 3.40.50.1100
af_Q5M7T9_1_87_3.90.1380.10 Alpha Beta;Alpha-Beta Complex;threonine synthase, domain 1, chain A;Threonine synthase, N-terminal domain 0.9518 1 85 3.90.1380.10
4f4fB01 Alpha Beta;Alpha-Beta Complex;threonine synthase, domain 1, chain A;Threonine synthase, N-terminal domain 0.9485 1 86 3.90.1380.10
ID Description Score Start End GO Terms
AF-A0A3S1FTA5-F1-model_v4 Threonine synthase (EC 4.2.3.1) 0.9874 1 119 GO:0004795
GO:0006520
GO:0030170
AF-A0A7W2BRD1-F1-model_v4 deleted 0.987 1 122
AF-A0A350DFV3-F1-model_v4 Threonine synthase (EC 4.2.3.1) 0.986 1 116 GO:0004795
GO:0006520
GO:0030170
AF-A0A3B9S1J6-F1-model_v4 Threonine synthase (EC 4.2.3.1) 0.9834 1 119 GO:0004795
AF-A0A356SP52-F1-model_v4 deleted 0.9816 1 99

Map