F340478

General Info

Members Datasets Scaffolds Average Seq Length
227 159 187 323

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2870801768|2870803723
Length 358
Sequence SAPSRAPRTVTVTGAAGNIGYALLFRIAAGGMLGPDTPVRLRLLEIPAALRAAEGTAMELADAAFPLLADVEVTDDPAVAFDGVQHAMLVGARPRTKGMERGDLLEANGGIFGPQGRAINDHAADDVRVVVVGNPANTNALIAAAHAPDVPAERFTALTRLDHNRAVAQLAARAGVAVTDVAGVTIWGNHSATQFPDLTHARVRVDGGWRPALEVVDPAWAAEEFVPRVAKRGAEIIEVRGASSAASAASAAVDHMRDWTLGTDAGADGTGTDAAQPGAGTDAGPRWTSAAVVSDGSYEVPEGLISSFPVTSDGGAAWRIVPGLAPDESLLPGTGGRLAATVAELEAERDAVRGLGLL

Samples

Sample ID Description Type Environment
1 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
2 2643221553 Microbacterium sp. Root553 Isolate Unclassified
3 2643221566 Microbacterium sp. Root166 Isolate Unclassified
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2643221616 Leifsonia sp. Root227 Isolate Unclassified
6 2643221630 Microbacterium sp. Root322 Isolate Unclassified
7 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
8 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
9 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
10 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
11 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
12 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
13 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
14 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
15 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
16 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
17 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
18 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
19 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
20 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
21 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
22 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
23 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
24 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
25 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
26 2919395869 Microbacterium resistens 2980 Isolate Unclassified
27 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
28 2928153084 Leifsonia sp. 563 Isolate Unclassified
29 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
30 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
31 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
32 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
33 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
34 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
35 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
36 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
37 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
38 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
39 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
40 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
42 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
43 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
44 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
45 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
46 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
47 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
48 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
49 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
50 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
51 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
52 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
53 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
54 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
55 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
56 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
57 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
58 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
59 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
60 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
68 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
74 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
75 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
77 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
80 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
101 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
102 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
103 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
104 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
110 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
114 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
115 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
116 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
117 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
118 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
119 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
131 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
132 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
133 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
154 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
157 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
158 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
159 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.62
Metatranscriptomes 1.76
Isolates 17.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.1
Nodule 0
Rhizoplane 11.45
Rhizosphere 51.98
Stem 0
Stem Tuber 0.44
Unclassified 22.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10023348 3300001979 Bacteria 2114
2 JGI24735J21928_10000910 3300002067 Bacteria 10554
3 JGI25164J39214_1000818 3300002772 Bacteria 10906
4 JGI25406J46586_10015190 3300003203 Bacteria 3252
5 JGI25165J46597_1000055 3300003214 Bacteria 224187
6 rootH2_10009211 3300003320 Bacteria 15403
7 JGI25407J50210_10007783 3300003373 Bacteria 2691
8 Ga0006562J51391_1058126 3300003578 Bacteria 12450
9 Ga0006562J51391_1058127 3300003578 Bacteria 12505
10 Ga0055539_1000019 3300003752 Bacteria 341727
11 Ga0055533_1000023 3300003756 Bacteria 341727
12 Ga0055525_1000088 3300003759 Bacteria 143732
13 Ga0055527_1000025 3300003760 Bacteria 195817
14 Ga0055542_1000048 3300003762 Bacteria 195800
15 Ga0055529_1000057 3300003763 Bacteria 195807
16 Ga0055540_1002339 3300003792 Bacteria 10142
17 Ga0055540_1002798 3300003792 Bacteria 8923
18 Ga0055540_1004377 3300003792 Bacteria 6401
19 Ga0070660_100034221 3300005339 Bacteria 3837
20 Ga0070668_100154096 3300005347 Bacteria 1861
21 Ga0070663_100077139 3300005455 Bacteria 2438
22 Ga0070684_100246241 3300005535 Bacteria 1633
23 Ga0068855_100108316 3300005563 Bacteria 3191
24 Ga0068857_100042951 3300005577 Bacteria 4010
25 Ga0081538_10003827 3300005981 Bacteria 14052
26 Ga0081539_10004169 3300005985 Bacteria 16405
27 Ga0081539_10070731 3300005985 Bacteria 1872
28 Ga0075430_100000840 3300006846 Bacteria 24062
29 Ga0105243_10704346 3300009148 Bacteria 985
30 Ga0105249_10000013 3300009553 Bacteria 283609
31 Ga0157369_10584368 3300013105 Bacteria 1153
32 Ga0157369_10644729 3300013105 Bacteria 1092
33 Ga0157372_10438826 3300013307 Bacteria 1522
34 Ga0157372_10447942 3300013307 Bacteria 1505
35 Ga0157379_10015671 3300014968 Bacteria 6660
36 Ga0206351_10965500 3300020077 Bacteria 1154
37 Ga0154015_1264013 3300020610 Bacteria 1529
38 Ga0209566_100031 3300025225 Bacteria 341555
39 Ga0209674_100001 3300025226 Bacteria 4013750
40 Ga0209672_100011 3300025228 Bacteria 856297
41 Ga0209147_103115 3300025229 Bacteria 3457
42 Ga0209563_100001 3300025230 Bacteria 4013775
43 Ga0209563_100155 3300025230 Bacteria 64311
44 Ga0207427_100028 3300025231 Bacteria 388949
45 Ga0209437_100698 3300025233 Bacteria 17557
46 Ga0209258_102337 3300025242 Bacteria 5013
47 Ga0209646_1000041 3300025246 Bacteria 346024
48 Ga0209677_100001 3300025253 Bacteria 4013787
49 Ga0209148_1000023 3300025254 Bacteria 680511
50 Ga0209233_1000001 3300025261 Bacteria 2992747
51 Ga0209455_1000023 3300025272 Bacteria 680449
52 Ga0209673_1038991 3300025273 Bacteria 1376
53 Ga0209051_1000630 3300025303 Bacteria 40553
54 Ga0209051_1009122 3300025303 Bacteria 5149
55 Ga0209051_1014771 3300025303 Bacteria 3626
56 Ga0209051_1027861 3300025303 Bacteria 2243
57 Ga0207647_10009043 3300025904 Bacteria 7091
58 Ga0207671_10007113 3300025914 Bacteria 9775
59 Ga0207661_10096050 3300025944 Bacteria 2479
60 Ga0207712_10000018 3300025961 Bacteria 317921
61 Ga0207678_10063739 3300026067 Bacteria 3167
62 Ga0207674_10495514 3300026116 Bacteria 1180
63 Ga0307408_100214966 3300031548 Bacteria 1565
64 Ga0307405_10092460 3300031731 Bacteria 2007
65 Ga0307406_10005223 3300031901 Bacteria 7095
66 Ga0307406_10015470 3300031901 Bacteria 4416
67 Ga0307406_10055534 3300031901 Bacteria 2532
68 Ga0307407_10191133 3300031903 Bacteria 1365
69 Ga0307416_100134079 3300032002 Bacteria 2236
70 Ga0307414_10048597 3300032004 Bacteria 2928
71 Ga0307414_10121717 3300032004 Bacteria 2007
72 Ga0307414_10163018 3300032004 Bacteria 1773
73 Ga0307414_10185382 3300032004 Bacteria 1678
74 Ga0307414_10222268 3300032004 Bacteria 1551
75 Ga0373925_0000008 3300037068 Bacteria 249158
76 Ga0395899_0073534 3300037312 Bacteria 2499
77 Ga0395900_0019597 3300037418 Bacteria 6898
78 Ga0395898_0000100 3300037466 Bacteria 226446
79 Ga0395898_0408712 3300037466 Bacteria 1294
80 Ga0395901_0494283 3300038443 Bacteria 1246
81 Ga0451793_0165128 3300041452 Bacteria 1181
82 Ga0451839_0772621 3300041496 Bacteria 1151
83 Ga0439462_0046145 3300042015 Bacteria 1167
84 Ga0466972_0098733 3300044658 Bacteria 1382
85 Ga0466965_0000455 3300044683 Bacteria 14384
86 Ga0466965_0029511 3300044683 Bacteria 2669
87 Ga0466961_0182241 3300044693 Bacteria 1303
88 Ga0466961_0185837 3300044693 Bacteria 1289
89 Ga0466970_0000403 3300044765 Bacteria 21038
90 Ga0466970_0016924 3300044765 Bacteria 3763
91 Ga0466970_0026167 3300044765 Bacteria 3058
92 Ga0466970_0133495 3300044765 Bacteria 1364
93 Ga0466970_0215102 3300044765 Bacteria 1071
94 Ga0466957_0276713 3300044842 Bacteria 1122
95 Ga0466960_0034826 3300044901 Bacteria 2349
96 Ga0466960_0178667 3300044901 Bacteria 1149
97 Ga0466958_0162276 3300045836 Bacteria 1412
98 Ga0466967_0215918 3300045976 Bacteria 1821
99 Ga0466967_0235308 3300045976 Bacteria 1745
100 Ga0466967_0409008 3300045976 Bacteria 1321
101 Ga0466967_0425130 3300045976 Bacteria 1295
102 Ga0495606_0012313 3300046507 Bacteria 6877
103 Ga0495656_0029313 3300046615 Bacteria 2215
104 Ga0495671_0230971 3300046692 Bacteria 895
105 Ga0496100_0000495 3300048903 Bacteria 19031
106 Ga0496100_0399489 3300048903 Bacteria 1046
107 Ga0496101_0000008 3300048904 Bacteria 309720
108 Ga0496101_0172306 3300048904 Bacteria 1664
109 Ga0496102_0000005 3300048905 Bacteria 481937
110 Ga0496102_0132324 3300048905 Bacteria 2336
111 Ga0496102_0239760 3300048905 Bacteria 1710
112 Ga0496103_0000002 3300048906 Bacteria 605387
113 Ga0496103_0096123 3300048906 Bacteria 1872
114 Ga0496104_0038611 3300048907 Bacteria 4468
115 Ga0496105_0044519 3300048908 Bacteria 3661
116 Ga0496105_0054922 3300048908 Bacteria 3288
117 Ga0496105_0170678 3300048908 Bacteria 1783
118 Ga0496106_0099849 3300048909 Bacteria 2250
119 Ga0496107_0003489 3300048910 Bacteria 10518
120 Ga0496107_0014066 3300048910 Bacteria 5602
121 Ga0496108_0093304 3300048911 Bacteria 2560
122 Ga0496109_0018703 3300048912 Bacteria 6091
123 Ga0496109_0059758 3300048912 Bacteria 3483
124 Ga0496112_0366180 3300048915 Bacteria 1383
125 Ga0496113_0043731 3300048916 Bacteria 3316
126 Ga0496115_0018378 3300048918 Bacteria 5366
127 Ga0496115_0027940 3300048918 Bacteria 4416
128 Ga0496115_0069526 3300048918 Bacteria 2852
129 Ga0496115_0089527 3300048918 Bacteria 2513
130 Ga0496116_0000034 3300048919 Bacteria 409567
131 Ga0496117_0000003 3300048920 Bacteria 1881097
132 Ga0496117_0009172 3300048920 Bacteria 9270
133 Ga0496117_0041942 3300048920 Bacteria 3345
134 Ga0496117_0143552 3300048920 Bacteria 1425
135 Ga0496118_0000001 3300048921 Bacteria 1881100
136 Ga0496118_0020977 3300048921 Bacteria 5771
137 Ga0496118_0030338 3300048921 Bacteria 4515
138 Ga0496119_0000127 3300048922 Bacteria 107730
139 Ga0496119_0050482 3300048922 Bacteria 2564
140 Ga0496120_0002389 3300048923 Bacteria 19126
141 Ga0496121_0000120 3300048924 Bacteria 174571
142 Ga0496121_0008003 3300048924 Bacteria 12619
143 Ga0496122_0084713 3300048925 Bacteria 2191
144 Ga0496122_0091261 3300048925 Bacteria 2075
145 Ga0496124_0004485 3300048927 Bacteria 16290
146 Ga0496125_0052686 3300048928 Bacteria 3344
147 Ga0496125_0173487 3300048928 Bacteria 1446
148 Ga0496126_0000417 3300048929 Bacteria 86182
149 Ga0496126_0004489 3300048929 Bacteria 16645
150 Ga0496126_0004570 3300048929 Bacteria 16426
151 Ga0496126_0076229 3300048929 Bacteria 2975
152 Ga0496126_0175658 3300048929 Bacteria 1822
153 Ga0501032_0035668 3300049569 Bacteria 3398
154 Ga0501032_0095918 3300049569 Bacteria 1966
155 Ga0501033_0022424 3300049570 Bacteria 4763
156 Ga0501033_0052162 3300049570 Bacteria 3031
157 Ga0501033_0080132 3300049570 Bacteria 2396
158 Ga0501034_0000382 3300049571 Bacteria 75673
159 Ga0501034_0026638 3300049571 Bacteria 5884
160 Ga0501034_0036148 3300049571 Bacteria 5005
161 Ga0501034_0091839 3300049571 Bacteria 3033
162 Ga0501034_0159606 3300049571 Bacteria 2227
163 Ga0501034_0171382 3300049571 Bacteria 2137
164 Ga0501034_0339116 3300049571 Bacteria 1433
165 Ga0501036_0376337 3300049572 Bacteria 1185
166 Ga0501037_0076102 3300049573 Bacteria 2437
167 Ga0501037_0091607 3300049573 Bacteria 2198
168 Ga0501038_0055912 3300049574 Bacteria 3389
169 Ga0501038_0198272 3300049574 Bacteria 1612
170 Ga0501039_0053371 3300049575 Bacteria 3128
171 Ga0501043_0054490 3300049579 Bacteria 3140
172 Ga0501046_0016201 3300049580 Bacteria 6248
173 Ga0501047_0037740 3300049581 Bacteria 4672
174 Ga0501047_0102857 3300049581 Bacteria 2736
175 Ga0501048_0136449 3300049582 Bacteria 1734
176 Ga0501070_0000065 3300049586 Bacteria 88506
177 Ga0501070_0001032 3300049586 Bacteria 25035
178 Ga0501035_0059167 3300049822 Bacteria 3412
179 Ga0501044_0054359 3300049823 Bacteria 4116
180 Ga0501044_0085256 3300049823 Bacteria 3192
181 Ga0501044_0133269 3300049823 Bacteria 2478
182 Ga0501044_0203184 3300049823 Bacteria 1939
183 nmdc:mga00v17_43792_c1 3300050491 Bacteria 2697
184 nmdc:mga0qj67_13104_c1 3300050509 Bacteria 6262
185 Ga0500635_0000002 3300053080 Bacteria 265613
186 Ga0500568_0004201 3300053139 Bacteria 7766
187 Ga0466962_0145525 3300061719 Bacteria 1149

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046692 Ga0495671_0230971 Ga0495671_0230971_13_876 269
2 3300009148 Ga0105243_10704346 Ga0105243_107043461 279
3 iso_pu_bacteria 2939582691 2939587912 279
4 3300048909 Ga0496106_0099849 Ga0496106_0099849_1318_2199 283
5 iso_pu_bacteria 2747842429 2747955456 289
6 3300049582 Ga0501048_0136449 Ga0501048_0136449_688_1662 300
7 3300003373 JGI25407J50210_10007783 JGI25407J50210_100077833 301
8 3300005981 Ga0081538_10003827 Ga0081538_100038275 301
9 3300037466 Ga0395898_0408712 Ga0395898_0408712_50_1024 301
10 3300038443 Ga0395901_0494283 Ga0395901_0494283_50_1024 301
11 3300048908 Ga0496105_0170678 Ga0496105_0170678_328_1302 301
12 3300048915 Ga0496112_0366180 Ga0496112_0366180_394_1368 301
13 3300005339 Ga0070660_100034221 Ga0070660_1000342211 303
14 3300046615 Ga0495656_0029313 Ga0495656_0029313_832_1800 304
15 3300013105 Ga0157369_10584368 Ga0157369_105843681 305
16 3300032004 Ga0307414_10222268 Ga0307414_102222681 305
17 3300042015 Ga0439462_0046145 Ga0439462_0046145_54_1034 306
18 3300045976 Ga0466967_0425130 Ga0466967_0425130_319_1269 306
19 3300049569 Ga0501032_0035668 Ga0501032_0035668_1134_2114 306
20 3300049570 Ga0501033_0080132 Ga0501033_0080132_446_1426 306
21 3300049571 Ga0501034_0026638 Ga0501034_0026638_1067_2047 306
22 3300049571 Ga0501034_0339116 Ga0501034_0339116_418_1398 306
23 3300049573 Ga0501037_0091607 Ga0501037_0091607_143_1123 306
24 3300049574 Ga0501038_0055912 Ga0501038_0055912_2197_3177 306
25 3300049575 Ga0501039_0053371 Ga0501039_0053371_716_1696 306
26 3300049579 Ga0501043_0054490 Ga0501043_0054490_1081_2061 306
27 3300049823 Ga0501044_0203184 Ga0501044_0203184_635_1615 306
28 3300053139 Ga0500568_0004201 Ga0500568_0004201_631_1608 306
29 3300049569 Ga0501032_0095918 Ga0501032_0095918_574_1551 308
30 3300049570 Ga0501033_0022424 Ga0501033_0022424_3184_4161 308
31 3300049571 Ga0501034_0091839 Ga0501034_0091839_2028_3005 308
32 3300049571 Ga0501034_0171382 Ga0501034_0171382_893_1870 308
33 3300049572 Ga0501036_0376337 Ga0501036_0376337_102_1079 308
34 3300049581 Ga0501047_0102857 Ga0501047_0102857_206_1186 308
35 3300049823 Ga0501044_0133269 Ga0501044_0133269_1063_2043 308
36 3300045976 Ga0466967_0409008 Ga0466967_0409008_311_1267 309
37 iso_pu_bacteria 2946033335 2946035184 310
38 3300044683 Ga0466965_0000455 Ga0466965_0000455_6506_7483 311
39 3300053080 Ga0500635_0000002 Ga0500635_0000002_240003_240965 311
40 iso_pu_bacteria 2643221542 2643734519 311
41 iso_pu_bacteria 2643221553 2643783967 311
42 iso_pu_bacteria 2643221630 2644172645 311
43 iso_pu_bacteria 2643221724 2644678878 311
44 iso_pu_bacteria 2728369380 2730228386 311
45 iso_pu_bacteria 2852646457 2852648243 311
46 iso_pu_bacteria 2852663356 2852666598 311
47 iso_pu_bacteria 2857723135 2857726751 311
48 iso_pu_bacteria 2945968032 2945970298 311
49 iso_pu_bacteria 2946041624 2946042677 311
50 iso_pu_bacteria 2946080515 2946082455 311
51 iso_pu_bacteria 8004182704 8004183229 311
52 3300003203 JGI25406J46586_10015190 JGI25406J46586_100151902 312
53 3300005985 Ga0081539_10004169 Ga0081539_1000416915 312
54 3300044765 Ga0466970_0215102 Ga0466970_0215102_22_984 312
55 3300048924 Ga0496121_0008003 Ga0496121_0008003_2131_3108 312
56 3300061719 Ga0466962_0145525 Ga0466962_0145525_125_1087 312
57 iso_pu_bacteria 2919395869 2919396997 312
58 3300005455 Ga0070663_100077139 Ga0070663_1000771391 313
59 3300020077 Ga0206351_10965500 Ga0206351_109655001 313
60 3300020610 Ga0154015_1264013 Ga0154015_12640131 313
61 3300026067 Ga0207678_10063739 Ga0207678_100637393 313
62 iso_pu_bacteria 2643221566 2643847515 313
63 iso_pu_bacteria 2643221597 2643997519 313
64 iso_pu_bacteria 2773857763 2774401079 313
65 iso_pu_bacteria 2811994872 2812325360 313
66 iso_pu_bacteria 2833709550 2833713202 313
67 iso_pu_bacteria 2870628048 2870628423 313
68 iso_pu_bacteria 2966921586 2966923468 313
69 iso_pu_bacteria 8045830549 8045830590 313
70 3300003752 Ga0055539_1000019 Ga0055539_1000019195 314
71 3300003756 Ga0055533_1000023 Ga0055533_1000023130 314
72 3300003759 Ga0055525_1000088 Ga0055525_100008853 314
73 3300005985 Ga0081539_10070731 Ga0081539_100707311 314
74 3300025225 Ga0209566_100031 Ga0209566_100031130 314
75 3300025226 Ga0209674_100001 Ga0209674_1000012022 314
76 3300025230 Ga0209563_100001 Ga0209563_1000012022 314
77 3300025253 Ga0209677_100001 Ga0209677_1000012022 314
78 3300037068 Ga0373925_0000008 Ga0373925_0000008_81548_82522 314
79 3300044693 Ga0466961_0182241 Ga0466961_0182241_102_1088 314
80 3300044765 Ga0466970_0016924 Ga0466970_0016924_2451_3419 314
81 3300044765 Ga0466970_0133495 Ga0466970_0133495_359_1327 314
82 3300044901 Ga0466960_0034826 Ga0466960_0034826_1253_2221 314
83 3300048920 Ga0496117_0009172 Ga0496117_0009172_4909_5877 314
84 3300049580 Ga0501046_0016201 Ga0501046_0016201_4716_5708 314
85 iso_pu_bacteria 8055034563 8055036401 314
86 3300003320 rootH2_10009211 rootH2_100092115 315
87 3300005347 Ga0070668_100154096 Ga0070668_1001540962 315
88 3300005535 Ga0070684_100246241 Ga0070684_1002462411 315
89 3300005577 Ga0068857_100042951 Ga0068857_1000429513 315
90 3300006846 Ga0075430_100000840 Ga0075430_1000008405 315
91 3300014968 Ga0157379_10015671 Ga0157379_100156712 315
92 3300025246 Ga0209646_1000041 Ga0209646_100004156 315
93 3300025944 Ga0207661_10096050 Ga0207661_100960503 315
94 3300026116 Ga0207674_10495514 Ga0207674_104955141 315
95 3300031548 Ga0307408_100214966 Ga0307408_1002149662 315
96 3300031731 Ga0307405_10092460 Ga0307405_100924601 315
97 3300031901 Ga0307406_10005223 Ga0307406_100052235 315
98 3300031901 Ga0307406_10015470 Ga0307406_100154704 315
99 3300031901 Ga0307406_10055534 Ga0307406_100555342 315
100 3300032002 Ga0307416_100134079 Ga0307416_1001340792 315
101 3300032004 Ga0307414_10048597 Ga0307414_100485975 315
102 3300032004 Ga0307414_10121717 Ga0307414_101217173 315
103 3300032004 Ga0307414_10163018 Ga0307414_101630182 315
104 3300032004 Ga0307414_10185382 Ga0307414_101853821 315
105 3300044765 Ga0466970_0026167 Ga0466970_0026167_1742_2731 315
106 3300045836 Ga0466958_0162276 Ga0466958_0162276_286_1275 315
107 3300045976 Ga0466967_0235308 Ga0466967_0235308_115_1095 315
108 3300048921 Ga0496118_0030338 Ga0496118_0030338_201_1190 315
109 3300048925 Ga0496122_0084713 Ga0496122_0084713_891_1880 315
110 3300048925 Ga0496122_0091261 Ga0496122_0091261_320_1309 315
111 3300048928 Ga0496125_0052686 Ga0496125_0052686_568_1557 315
112 3300048928 Ga0496125_0173487 Ga0496125_0173487_234_1223 315
113 3300048929 Ga0496126_0076229 Ga0496126_0076229_1285_2274 315
114 3300049571 Ga0501034_0000382 Ga0501034_0000382_740_1729 315
115 3300049571 Ga0501034_0036148 Ga0501034_0036148_2247_3224 315
116 3300049574 Ga0501038_0198272 Ga0501038_0198272_70_1059 315
117 3300050491 nmdc:mga00v17_43792_c1 nmdc:mga00v17_43792_c1_663_1652 315
118 3300050509 nmdc:mga0qj67_13104_c1 nmdc:mga0qj67_13104_c1_4308_5282 315
119 iso_pu_bacteria 2995726249 2995727630 315
120 iso_pu_bacteria 8055037949 8055038127 315
121 3300009553 Ga0105249_10000013 Ga0105249_10000013131 316
122 3300013105 Ga0157369_10644729 Ga0157369_106447291 316
123 3300013307 Ga0157372_10447942 Ga0157372_104479422 316
124 3300025961 Ga0207712_10000018 Ga0207712_10000018161 316
125 3300044765 Ga0466970_0000403 Ga0466970_0000403_4869_5861 316
126 3300044842 Ga0466957_0276713 Ga0466957_0276713_109_1101 316
127 3300044901 Ga0466960_0178667 Ga0466960_0178667_48_1058 316
128 3300045976 Ga0466967_0215918 Ga0466967_0215918_129_1121 316
129 3300048927 Ga0496124_0004485 Ga0496124_0004485_137_1117 316
130 3300048929 Ga0496126_0004489 Ga0496126_0004489_15250_16230 316
131 iso_pu_bacteria 2939660829 2939661688 316
132 3300005563 Ga0068855_100108316 Ga0068855_1001083163 317
133 3300025914 Ga0207671_10007113 Ga0207671_100071139 317
134 3300031903 Ga0307407_10191133 Ga0307407_101911331 317
135 3300044683 Ga0466965_0029511 Ga0466965_0029511_1030_2049 317
136 3300046507 Ga0495606_0012313 Ga0495606_0012313_891_1874 317
137 3300048903 Ga0496100_0000495 Ga0496100_0000495_14486_15469 317
138 3300048904 Ga0496101_0000008 Ga0496101_0000008_168208_169191 317
139 3300048904 Ga0496101_0172306 Ga0496101_0172306_61_1089 317
140 3300048905 Ga0496102_0000005 Ga0496102_0000005_319516_320499 317
141 3300048906 Ga0496103_0000002 Ga0496103_0000002_161469_162452 317
142 3300048907 Ga0496104_0038611 Ga0496104_0038611_2483_3511 317
143 3300048908 Ga0496105_0054922 Ga0496105_0054922_1832_2860 317
144 3300048910 Ga0496107_0003489 Ga0496107_0003489_9021_10004 317
145 3300048911 Ga0496108_0093304 Ga0496108_0093304_369_1397 317
146 3300048912 Ga0496109_0059758 Ga0496109_0059758_1369_2397 317
147 3300048916 Ga0496113_0043731 Ga0496113_0043731_1190_2218 317
148 3300048919 Ga0496116_0000034 Ga0496116_0000034_247382_248365 317
149 3300048920 Ga0496117_0000003 Ga0496117_0000003_753605_754588 317
150 3300048921 Ga0496118_0000001 Ga0496118_0000001_753608_754591 317
151 3300048922 Ga0496119_0000127 Ga0496119_0000127_97054_98037 317
152 3300048923 Ga0496120_0002389 Ga0496120_0002389_9822_10805 317
153 3300048924 Ga0496121_0000120 Ga0496121_0000120_43299_44282 317
154 3300048929 Ga0496126_0000417 Ga0496126_0000417_77657_78640 317
155 3300048929 Ga0496126_0175658 Ga0496126_0175658_224_1207 317
156 iso_pu_bacteria 2844841374 2844843579 317
157 iso_pu_bacteria 2902837492 2902842468 317
158 iso_pu_bacteria 2919055335 2919055566 317
159 iso_pu_bacteria 2928153084 2928153712 317
160 3300003760 Ga0055527_1000025 Ga0055527_1000025178 318
161 3300003762 Ga0055542_1000048 Ga0055542_1000048178 318
162 3300003763 Ga0055529_1000057 Ga0055529_10000573 318
163 3300003792 Ga0055540_1002798 Ga0055540_10027988 318
164 3300013307 Ga0157372_10438826 Ga0157372_104388262 318
165 3300025228 Ga0209672_100011 Ga0209672_100011836 318
166 3300025229 Ga0209147_103115 Ga0209147_1031153 318
167 3300025242 Ga0209258_102337 Ga0209258_1023373 318
168 3300025254 Ga0209148_1000023 Ga0209148_1000023674 318
169 3300025272 Ga0209455_1000023 Ga0209455_1000023674 318
170 3300025303 Ga0209051_1009122 Ga0209051_10091224 318
171 3300025904 Ga0207647_10009043 Ga0207647_100090431 318
172 3300037312 Ga0395899_0073534 Ga0395899_0073534_1122_2102 318
173 3300037418 Ga0395900_0019597 Ga0395900_0019597_1637_2617 318
174 3300037466 Ga0395898_0000100 Ga0395898_0000100_81020_82000 318
175 3300048903 Ga0496100_0399489 Ga0496100_0399489_44_1024 318
176 3300048905 Ga0496102_0132324 Ga0496102_0132324_1330_2310 318
177 3300048906 Ga0496103_0096123 Ga0496103_0096123_735_1715 318
178 3300048910 Ga0496107_0014066 Ga0496107_0014066_3011_4024 318
179 3300048912 Ga0496109_0018703 Ga0496109_0018703_1627_2640 318
180 3300048918 Ga0496115_0018378 Ga0496115_0018378_2760_3773 318
181 3300048918 Ga0496115_0089527 Ga0496115_0089527_356_1336 318
182 3300048922 Ga0496119_0050482 Ga0496119_0050482_1188_2201 318
183 3300049586 Ga0501070_0000065 Ga0501070_0000065_39819_40799 318
184 3300049822 Ga0501035_0059167 Ga0501035_0059167_2309_3289 318
185 iso_pu_bacteria 2870801768 2870803723 318
186 3300048905 Ga0496102_0239760 Ga0496102_0239760_519_1502 319
187 3300048908 Ga0496105_0044519 Ga0496105_0044519_470_1453 319
188 3300048918 Ga0496115_0027940 Ga0496115_0027940_832_1815 319
189 3300048918 Ga0496115_0069526 Ga0496115_0069526_1541_2524 319
190 3300048920 Ga0496117_0041942 Ga0496117_0041942_2019_3002 319
191 3300048920 Ga0496117_0143552 Ga0496117_0143552_344_1327 319
192 3300048921 Ga0496118_0020977 Ga0496118_0020977_4096_5079 319
193 3300049586 Ga0501070_0001032 Ga0501070_0001032_16069_17109 319
194 3300049570 Ga0501033_0052162 Ga0501033_0052162_57_1076 320
195 3300049573 Ga0501037_0076102 Ga0501037_0076102_62_1081 320
196 3300049581 Ga0501047_0037740 Ga0501047_0037740_2836_3855 320
197 3300049823 Ga0501044_0054359 Ga0501044_0054359_3058_4077 320
198 3300001979 JGI24740J21852_10023348 JGI24740J21852_100233482 321
199 3300002067 JGI24735J21928_10000910 JGI24735J21928_100009106 321
200 3300002772 JGI25164J39214_1000818 JGI25164J39214_10008186 321
201 3300003214 JGI25165J46597_1000055 JGI25165J46597_100005515 321
202 3300003578 Ga0006562J51391_1058126 Ga0006562J51391_10581266 321
203 3300003578 Ga0006562J51391_1058127 Ga0006562J51391_10581278 321
204 3300003792 Ga0055540_1002339 Ga0055540_100233910 321
205 3300003792 Ga0055540_1004377 Ga0055540_10043775 321
206 3300025230 Ga0209563_100155 Ga0209563_10015515 321
207 3300025231 Ga0207427_100028 Ga0207427_100028319 321
208 3300025233 Ga0209437_100698 Ga0209437_10069812 321
209 3300025261 Ga0209233_1000001 Ga0209233_1000001817 321
210 3300025273 Ga0209673_1038991 Ga0209673_10389912 321
211 3300025303 Ga0209051_1000630 Ga0209051_10006305 321
212 3300025303 Ga0209051_1014771 Ga0209051_10147714 321
213 3300025303 Ga0209051_1027861 Ga0209051_10278612 321
214 3300041452 Ga0451793_0165128 Ga0451793_0165128_115_1143 321
215 3300041496 Ga0451839_0772621 Ga0451839_0772621_99_1124 321
216 3300044658 Ga0466972_0098733 Ga0466972_0098733_161_1150 321
217 3300044693 Ga0466961_0185837 Ga0466961_0185837_238_1227 321
218 3300048929 Ga0496126_0004570 Ga0496126_0004570_3349_4365 321
219 3300049571 Ga0501034_0159606 Ga0501034_0159606_288_1328 321
220 3300049823 Ga0501044_0085256 Ga0501044_0085256_1346_2386 321
221 iso_pu_bacteria 2643221616 2644097977 321
222 iso_pu_bacteria 2643221687 2644489684 321
223 iso_pu_bacteria 2857479173 2857480820 321
224 iso_pu_bacteria 2857632687 2857633430 321
225 iso_pu_bacteria 2870804320 2870805677 321
226 iso_pu_bacteria 2884763398 2884766746 321
227 iso_pu_bacteria 2919523602 2919525702 321

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00056

Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

8

156

0.94

PF02866

Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

159

351

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1wzi-assembly1.cif.gz_A structural basis for alteration of cofactor specificity of malate dehydrogenase from thermus flavus 0.968 5 321
1bmd-assembly1.cif.gz_B determinants of protein thermostability observed in the 1.9 angstroms crystal structure of malate dehydrogenase from the thermophilic bacterium thermus flavus 0.9659 5 321
2cvq-assembly1.cif.gz_B crystal structure of nad(h)-dependent malate dehydrogenase complexed with nadph 0.9655 5 321
1bdm-assembly1.cif.gz_B the structure at 1.8 angstroms resolution of a single site mutant (t189i) of malate dehydrogenase from thermus flavus with increased enzymatic activity 0.9652 5 321
3d5t-assembly2.cif.gz_C crystal structure of malate dehydrogenase from burkholderia pseudomallei 0.9652 5 317
ID Description Score Start End Superfamily
4uuoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9824 6 151 3.40.50.720
af_Q4D123_7_158_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9813 8 151 3.40.50.720
7mdhC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9765 5 154 3.40.50.720
7mdhC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9516 5 154 3.40.50.720
af_A0A1D6HWW8_53_199_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9514 14 155 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3C1DL03-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 1.002 4 85 GO:0006108
GO:0030060
AF-A0A6M1ZFR5-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 0.9951 6 87 GO:0006108
GO:0030060
AF-A0A382N203-F1-model_v4 Lactate/malate dehydrogenase N-terminal domain-containing protein 0.9942 6 91 GO:0006108
GO:0016615
AF-A0A7V9HCJ0-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 0.9936 4 96 GO:0006108
GO:0016020
GO:0030060
AF-A0A7K2EB87-F1-model_v4 Malate dehydrogenase (EC 1.1.1.37) 0.9931 2 83 GO:0006108
GO:0030060

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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