F340427

General Info

Members Datasets Scaffolds Average Seq Length
227 170 196 204

Family's Representative Sequence

Representative Sequence 3300053136|Ga0500559_0010956|Ga0500559_0010956_599_1324
Length 241
Sequence LRDVVDFVRRHRGERVKILDESLDNLVTGYDFRVRTVAICLASLAGYIDALGFMELGGFFVSFMSGNSTRLAVGMTANLVNATMAASLILTFLVGVILGSLVAQFAKHHRRVAVMSFVAALLFGAASLNAIGFKHAAIVAMGLAMGAENAVFERDGEVSIGLTYMTGTLVKLGQRLAAAFMGGSKTAWGPYFLLWSGLVGGAVLGSLAYAHLGLNALWLAVTASVGLSIALARIGHGEISP

Samples

Sample ID Description Type Environment
1 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
2 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
3 2643221584 Caulobacter sp. Root656 Isolate Unclassified
4 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
5 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
6 2643221733 Bosea sp. Root381 Isolate Unclassified
7 2643221734 Bosea sp. Root670 Isolate Unclassified
8 2643221736 Bosea sp. Root483D1 Isolate Unclassified
9 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
10 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
11 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
12 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
13 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
14 2818991467 Bosea vestrisii 3192 Isolate Unclassified
15 2841760612 Bosea sp. Tri-49 Isolate Nodule
16 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
17 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
18 2844104063 Bosea sp. Tri-39 Isolate Nodule
19 2851182111 Bosea sp. Tri-44 Isolate Nodule
20 2851246043 Bosea sp. Tri-54 Isolate Nodule
21 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
22 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
23 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
24 2922554459 Rhodococcus sp. 66b Isolate Unclassified
25 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
26 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
27 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
28 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
29 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
30 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
31 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
32 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
33 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
34 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
35 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
36 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
37 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
38 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
39 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
40 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
41 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
42 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
43 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
44 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
45 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
46 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
47 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
48 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
49 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
50 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
51 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
55 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
56 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
57 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
58 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
59 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
60 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
61 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
62 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
78 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
80 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
82 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
85 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
119 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
122 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
123 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
124 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
127 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
142 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
143 3300049676 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_A_3_control Metagenome Rhizosphere
144 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
147 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
148 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
149 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
150 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
151 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
152 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
153 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
154 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
155 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
156 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
157 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
158 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
159 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
160 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
161 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
164 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
165 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
166 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
167 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
168 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere
169 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere
170 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.34
Metatranscriptomes 0
Isolates 13.66

Biome Distribution

Category Percentage (%)
Aerial Root 0.88
Bulb 0
Endosphere 31.28
Nodule 3.08
Rhizoplane 1.32
Rhizosphere 45.37
Stem 0
Stem Tuber 0
Unclassified 18.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000092 3300001904 Bacteria 14705
2 JGI24741J21665_1000050 3300001915 Bacteria 29389
3 JGI24740J21852_10001976 3300001979 Bacteria 9370
4 JGI24739J22299_10138349 3300001989 Bacteria 722
5 JGI24737J22298_10071745 3300001990 Bacteria 1034
6 JGI24738J21930_10001605 3300002075 Bacteria 6226
7 JGI25159J45721_1007061 3300002987 Bacteria 3272
8 JGI25151J46595_10000028 3300003187 Bacteria 208373
9 JGI25151J46595_10000114 3300003187 Bacteria 107534
10 Ga0055526_1001215 3300003771 Bacteria 18542
11 Ga0055526_1003557 3300003771 Bacteria 9812
12 Ga0055524_1000020 3300003775 Bacteria 227971
13 Ga0055534_1012682 3300003784 Bacteria 1654
14 Ga0055530_10019047 3300003791 Bacteria 2092
15 Ga0065165_1000551 3300005262 Bacteria 56364
16 Ga0065704_10103376 3300005289 Bacteria 2174
17 Ga0070660_100096685 3300005339 Bacteria 2336
18 Ga0070661_100028460 3300005344 Bacteria 4031
19 Ga0070668_100119356 3300005347 Bacteria 2106
20 Ga0070671_100055204 3300005355 Bacteria 3304
21 Ga0070667_100198407 3300005367 Bacteria 1780
22 Ga0070662_100317086 3300005457 Bacteria 1270
23 Ga0070665_100148133 3300005548 Bacteria 2350
24 Ga0070665_100323638 3300005548 Unclassified 1546
25 Ga0068857_100262463 3300005577 Bacteria 1585
26 Ga0068856_100017541 3300005614 Bacteria 6937
27 Ga0068858_100132263 3300005842 Bacteria 2340
28 Ga0068862_100063492 3300005844 Bacteria 3177
29 Ga0075365_10104831 3300006038 Bacteria 1939
30 Ga0075365_10406028 3300006038 Bacteria 961
31 Ga0075368_10000560 3300006042 Bacteria 11151
32 Ga0075363_100002123 3300006048 Bacteria 7960
33 Ga0075363_100019224 3300006048 Bacteria 3412
34 Ga0075364_10075080 3300006051 Bacteria 2230
35 Ga0075432_10000407 3300006058 Bacteria 12595
36 Ga0075362_10001259 3300006177 Bacteria 7999
37 Ga0075367_10007398 3300006178 Bacteria 5618
38 Ga0075367_10065766 3300006178 Bacteria 2172
39 Ga0075366_10006304 3300006195 Bacteria 6489
40 Ga0075366_10037109 3300006195 Bacteria 2875
41 Ga0075370_10000502 3300006353 Bacteria 14842
42 Ga0075370_10022917 3300006353 Bacteria 3435
43 Ga0075370_10072522 3300006353 Bacteria 1971
44 Ga0075435_100428080 3300007076 Bacteria 1140
45 Ga0105240_10771390 3300009093 Bacteria 1044
46 Ga0105241_10000593 3300009174 Bacteria 27250
47 Ga0105248_10054106 3300009177 Bacteria 4501
48 Ga0105237_10054537 3300009545 Bacteria 4005
49 Ga0105237_10447331 3300009545 Bacteria 1298
50 Ga0105238_10260086 3300009551 Bacteria 1715
51 Ga0105238_10747169 3300009551 Bacteria 992
52 Ga0105239_10373526 3300010375 Bacteria 1611
53 Ga0157373_10013484 3300013100 Bacteria 5996
54 Ga0157371_10264066 3300013102 Bacteria 1241
55 Ga0157371_10399491 3300013102 Bacteria 1005
56 Ga0157371_10487250 3300013102 Bacteria 909
57 Ga0157369_10071541 3300013105 Bacteria 3723
58 Ga0157369_10582336 3300013105 Bacteria 1156
59 Ga0157369_10592741 3300013105 Bacteria 1144
60 Ga0171462_1047 3300013250 Bacteria 46389
61 Ga0163162_10002136 3300013306 Bacteria 18555
62 Ga0157380_10008108 3300014326 Bacteria 7486
63 Ga0209673_1016106 3300025273 Bacteria 2810
64 Ga0209130_1000190 3300025284 Bacteria 86573
65 Ga0209675_1000629 3300025291 Bacteria 25161
66 Ga0209025_1000008 3300025294 Bacteria 1130876
67 Ga0209025_1002163 3300025294 Bacteria 21889
68 Ga0209025_1014643 3300025294 Bacteria 4802
69 Ga0209025_1016418 3300025294 Bacteria 4371
70 Ga0209564_1000049 3300025295 Bacteria 362075
71 Ga0209564_1000065 3300025295 Bacteria 315205
72 Ga0209758_1064495 3300025297 Bacteria 1187
73 Ga0209050_1006316 3300025298 Bacteria 7060
74 Ga0209256_1000014 3300025299 Bacteria 687409
75 Ga0209256_1000200 3300025299 Bacteria 112931
76 Ga0207426_1004849 3300025302 Bacteria 6374
77 Ga0207656_10103736 3300025321 Bacteria 1306
78 Ga0207705_10152417 3300025909 Bacteria 1732
79 Ga0207654_10026963 3300025911 Bacteria 3118
80 Ga0207695_10309953 3300025913 Bacteria 1469
81 Ga0207671_10287264 3300025914 Bacteria 1298
82 Ga0207657_10004343 3300025919 Bacteria 15013
83 Ga0207649_10485788 3300025920 Bacteria 937
84 Ga0207694_10902560 3300025924 Bacteria 747
85 Ga0207644_10047988 3300025931 Bacteria 3050
86 Ga0207706_10050209 3300025933 Bacteria 3687
87 Ga0207667_10106930 3300025949 Bacteria 2886
88 Ga0207667_10348142 3300025949 Bacteria 1511
89 Ga0207668_10002117 3300025972 Bacteria 11587
90 Ga0207640_10039337 3300025981 Bacteria 2993
91 Ga0207640_10523634 3300025981 Bacteria 991
92 Ga0207658_10061410 3300025986 Bacteria 2808
93 Ga0207703_10200546 3300026035 Bacteria 1773
94 Ga0207639_10000343 3300026041 Bacteria 32196
95 Ga0207678_10000083 3300026067 Bacteria 77023
96 Ga0207702_10011316 3300026078 Bacteria 7439
97 Ga0207674_10014271 3300026116 Bacteria 8779
98 Ga0207698_10047631 3300026142 Bacteria 3249
99 Ga0207698_10555141 3300026142 Bacteria 1126
100 Ga0209813_10000504 3300027866 Bacteria 9206
101 Ga0207428_10138471 3300027907 Bacteria 1860
102 Ga0268265_10220702 3300028380 Bacteria 1658
103 Ga0268264_10295910 3300028381 Bacteria 1522
104 Ga0307515_10000004 3300028794 Bacteria 846506
105 Ga0307408_100537252 3300031548 Bacteria 1029
106 Ga0307406_10139178 3300031901 Bacteria 1715
107 Ga0307409_100063630 3300031995 Bacteria 2893
108 Ga0307416_101002265 3300032002 Bacteria 938
109 Ga0307414_10004354 3300032004 Bacteria 7684
110 Ga0307414_10013561 3300032004 Bacteria 4856
111 Ga0307414_10086188 3300032004 Bacteria 2316
112 Ga0307414_10125179 3300032004 Bacteria 1984
113 Ga0307414_10168635 3300032004 Bacteria 1747
114 Ga0307414_10234718 3300032004 Bacteria 1514
115 Ga0307414_10355019 3300032004 Bacteria 1259
116 Ga0307414_10913625 3300032004 Bacteria 805
117 Ga0307415_100443112 3300032126 Bacteria 1121
118 Ga0395899_0000003 3300037312 Bacteria 1232684
119 Ga0395905_0000387 3300037471 Bacteria 62704
120 Ga0395905_0406766 3300037471 Bacteria 1256
121 Ga0237819_00130 3300038705 Bacteria 28324
122 Ga0237816_00269 3300039145 Bacteria 4395
123 Ga0436365_1616465 3300039437 Bacteria 802
124 Ga0451843_1194258 3300041509 Bacteria 1283
125 Ga0451853_3256631 3300041512 Bacteria 937
126 Ga0495607_0049014 3300046501 Bacteria 2466
127 Ga0495620_0007327 3300046515 Bacteria 6003
128 Ga0495648_0000466 3300046524 Bacteria 43545
129 Ga0495654_0043911 3300046530 Bacteria 2214
130 Ga0495633_0079622 3300046558 Bacteria 1525
131 Ga0495633_0191038 3300046558 Bacteria 941
132 Ga0495668_0016595 3300046616 Bacteria 4280
133 Ga0495671_0108297 3300046692 Bacteria 1357
134 Ga0496108_0087816 3300048911 Bacteria 2641
135 Ga0496110_0020636 3300048913 Bacteria 5566
136 Ga0496113_0090761 3300048916 Bacteria 2354
137 Ga0496117_0003487 3300048920 Bacteria 18243
138 Ga0496118_0012405 3300048921 Bacteria 8184
139 Ga0496121_0003683 3300048924 Bacteria 21514
140 Ga0496121_0048217 3300048924 Bacteria 3626
141 Ga0496121_0183959 3300048924 Bacteria 1505
142 Ga0496121_0313944 3300048924 Bacteria 1058
143 Ga0496122_0002860 3300048925 Bacteria 23639
144 Ga0496122_0018546 3300048925 Bacteria 6420
145 Ga0496122_0020285 3300048925 Bacteria 6015
146 Ga0496122_0026237 3300048925 Bacteria 5031
147 Ga0496123_0001072 3300048926 Bacteria 41355
148 Ga0496123_0005991 3300048926 Bacteria 11955
149 Ga0496123_0014200 3300048926 Bacteria 6620
150 Ga0496124_0002572 3300048927 Bacteria 23517
151 Ga0496124_0257099 3300048927 Bacteria 1288
152 Ga0496124_0522515 3300048927 Bacteria 790
153 Ga0496125_0396135 3300048928 Bacteria 808
154 Ga0496125_0396808 3300048928 Bacteria 807
155 Ga0496126_0169752 3300048929 Bacteria 1859
156 Ga0496126_0173432 3300048929 Bacteria 1836
157 Ga0501209_000692 3300049656 Bacteria 4238
158 Ga0501223_000048 3300049663 Bacteria 41037
159 Ga0501246_001399 3300049676 Bacteria 1842
160 Ga0501225_0000159 3300049705 Bacteria 20527
161 Ga0501225_0003123 3300049705 Bacteria 5062
162 Ga0501044_0285831 3300049823 Bacteria 1582
163 Ga0501044_0780056 3300049823 Bacteria 836
164 nmdc:mga03683_150277_c1 3300050489 Bacteria 1051
165 nmdc:mga0k408_6839_c1 3300050493 Bacteria 6083
166 nmdc:mga06z11_55896_c1 3300050494 Bacteria 2040
167 nmdc:mga04h51_410_c1 3300050495 Bacteria 10383
168 nmdc:mga07m45_24098_c1 3300050496 Bacteria 3331
169 nmdc:mga07m45_91_c1 3300050496 Bacteria 31768
170 nmdc:mga07m45_9_c1 3300050496 Bacteria 171776
171 nmdc:mga0sz30_31609_c1 3300050516 Bacteria 2191
172 nmdc:mga0sz30_50_c1 3300050516 Bacteria 43433
173 Ga0500643_001149 3300053087 Bacteria 15809
174 Ga0500643_002837 3300053087 Bacteria 8648
175 Ga0500647_0101246 3300053091 Bacteria 1375
176 Ga0500641_0010935 3300053096 Bacteria 3290
177 Ga0500593_001757 3300053117 Bacteria 7804
178 Ga0500594_0002835 3300053118 Bacteria 3781
179 Ga0500595_007463 3300053119 Bacteria 4538
180 Ga0500608_000538 3300053122 Bacteria 14197
181 Ga0500608_006632 3300053122 Bacteria 4730
182 Ga0500614_009095 3300053123 Bacteria 2116
183 Ga0500559_0000015 3300053136 Bacteria 158494
184 Ga0500559_0000914 3300053136 Bacteria 18771
185 Ga0500559_0003300 3300053136 Bacteria 8003
186 Ga0500559_0010956 3300053136 Bacteria 3883
187 Ga0500559_0155521 3300053136 Bacteria 1074
188 Ga0500564_000028 3300053138 Bacteria 42633
189 Ga0500564_000171 3300053138 Bacteria 17218
190 Ga0500568_0000002 3300053139 Bacteria 880601
191 Ga0500624_000149 3300053157 Bacteria 28817
192 Ga0500636_0008289 3300053177 Bacteria 6029
193 Ga0500636_0041042 3300053177 Bacteria 2737
194 Ga0500567_014627 3300053723 Bacteria 3778
195 Ga0500625_000238 3300053729 Bacteria 12873
196 Ga0500661_000050 3300055283 Bacteria 18211

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046692 Ga0495671_0108297 Ga0495671_0108297_22_558 133
2 3300048928 Ga0496125_0396135 Ga0496125_0396135_219_773 135
3 3300048928 Ga0496125_0396808 Ga0496125_0396808_36_590 135
4 3300014326 Ga0157380_10008108 Ga0157380_100081084 149
5 3300025294 Ga0209025_1002163 Ga0209025_10021638 152
6 3300032004 Ga0307414_10913625 Ga0307414_109136251 155
7 3300025294 Ga0209025_1016418 Ga0209025_10164183 156
8 3300032126 Ga0307415_100443112 Ga0307415_1004431122 157
9 3300048911 Ga0496108_0087816 Ga0496108_0087816_76_741 158
10 3300013250 Ga0171462_1047 Ga0171462_10474 159
11 3300046616 Ga0495668_0016595 Ga0495668_0016595_1338_2003 160
12 3300053087 Ga0500643_001149 Ga0500643_001149_7571_8218 160
13 3300053096 Ga0500641_0010935 Ga0500641_0010935_1410_2081 160
14 3300053136 Ga0500559_0000914 Ga0500559_0000914_11982_12629 160
15 3300055283 Ga0500661_000050 Ga0500661_000050_1198_1845 160
16 3300053119 Ga0500595_007463 Ga0500595_007463_2928_3584 162
17 3300032004 Ga0307414_10086188 Ga0307414_100861882 163
18 3300037471 Ga0395905_0000387 Ga0395905_0000387_46200_46844 164
19 3300053123 Ga0500614_009095 Ga0500614_009095_1485_2072 165
20 3300005548 Ga0070665_100148133 Ga0070665_1001481333 169
21 3300005842 Ga0068858_100132263 Ga0068858_1001322632 169
22 3300013306 Ga0163162_10002136 Ga0163162_1000213619 169
23 3300026035 Ga0207703_10200546 Ga0207703_102005463 169
24 3300028381 Ga0268264_10295910 Ga0268264_102959103 169
25 3300048925 Ga0496122_0020285 Ga0496122_0020285_2322_2969 169
26 3300048926 Ga0496123_0005991 Ga0496123_0005991_904_1551 169
27 3300048927 Ga0496124_0257099 Ga0496124_0257099_444_1151 169
28 3300046558 Ga0495633_0191038 Ga0495633_0191038_69_716 170
29 3300048929 Ga0496126_0169752 Ga0496126_0169752_66_773 170
30 3300049656 Ga0501209_000692 Ga0501209_000692_610_1254 170
31 3300053087 Ga0500643_002837 Ga0500643_002837_6797_7444 170
32 3300053157 Ga0500624_000149 Ga0500624_000149_18142_18789 170
33 3300053177 Ga0500636_0008289 Ga0500636_0008289_4982_5629 170
34 3300006058 Ga0075432_10000407 Ga0075432_100004077 171
35 3300007076 Ga0075435_100428080 Ga0075435_1004280802 171
36 3300027907 Ga0207428_10138471 Ga0207428_101384713 171
37 3300039437 Ga0436365_1616465 Ga0436365_1616465_126_758 171
38 3300046515 Ga0495620_0007327 Ga0495620_0007327_3466_4113 171
39 3300006048 Ga0075363_100019224 Ga0075363_1000192241 172
40 3300006178 Ga0075367_10065766 Ga0075367_100657662 172
41 3300006353 Ga0075370_10022917 Ga0075370_100229172 172
42 3300049823 Ga0501044_0780056 Ga0501044_0780056_70_717 172
43 3300050496 nmdc:mga07m45_24098_c1 nmdc:mga07m45_24098_c1_2281_2946 172
44 3300009545 Ga0105237_10447331 Ga0105237_104473312 173
45 3300025914 Ga0207671_10287264 Ga0207671_102872642 173
46 3300032004 Ga0307414_10013561 Ga0307414_100135617 174
47 3300041512 Ga0451853_3256631 Ga0451853_3256631_143_760 174
48 3300046501 Ga0495607_0049014 Ga0495607_0049014_1527_2141 174
49 3300053177 Ga0500636_0041042 Ga0500636_0041042_290_985 175
50 3300006353 Ga0075370_10000502 Ga0075370_1000050214 176
51 3300009093 Ga0105240_10771390 Ga0105240_107713902 176
52 3300009174 Ga0105241_10000593 Ga0105241_1000059325 176
53 3300009545 Ga0105237_10054537 Ga0105237_100545372 176
54 3300009551 Ga0105238_10260086 Ga0105238_102600862 176
55 3300009551 Ga0105238_10747169 Ga0105238_107471692 176
56 3300010375 Ga0105239_10373526 Ga0105239_103735262 176
57 3300013100 Ga0157373_10013484 Ga0157373_100134845 176
58 3300013102 Ga0157371_10264066 Ga0157371_102640662 176
59 3300013102 Ga0157371_10399491 Ga0157371_103994911 176
60 3300013102 Ga0157371_10487250 Ga0157371_104872501 176
61 3300013105 Ga0157369_10582336 Ga0157369_105823362 176
62 3300013105 Ga0157369_10592741 Ga0157369_105927412 176
63 3300031901 Ga0307406_10139178 Ga0307406_101391781 176
64 3300032004 Ga0307414_10125179 Ga0307414_101251792 176
65 3300049705 Ga0501225_0003123 Ga0501225_0003123_262_882 176
66 3300050496 nmdc:mga07m45_91_c1 nmdc:mga07m45_91_c1_4159_4803 176
67 iso_pu_bacteria 2941485952 2941486530 176
68 3300048925 Ga0496122_0018546 Ga0496122_0018546_4712_5359 177
69 3300048926 Ga0496123_0014200 Ga0496123_0014200_1054_1701 177
70 3300049663 Ga0501223_000048 Ga0501223_000048_6529_7158 178
71 3300049676 Ga0501246_001399 Ga0501246_001399_1083_1712 178
72 3300049705 Ga0501225_0000159 Ga0501225_0000159_10935_11564 178
73 3300053122 Ga0500608_006632 Ga0500608_006632_2143_2772 178
74 iso_pu_bacteria 2643221734 2644735043 178
75 iso_pu_bacteria 2643221736 2644745476 178
76 iso_pu_bacteria 2739367664 2739650890 178
77 iso_pu_bacteria 2739367865 2740029363 178
78 iso_pu_bacteria 2818991467 2819719608 178
79 iso_pu_bacteria 2841760612 2841761017 178
80 iso_pu_bacteria 2841911363 2841912965 178
81 iso_pu_bacteria 2841917233 2841918712 178
82 iso_pu_bacteria 2844104063 2844106674 178
83 iso_pu_bacteria 2851182111 2851183808 178
84 iso_pu_bacteria 2851246043 2851247030 178
85 iso_pu_bacteria 2917699015 2917704842 178
86 iso_pu_bacteria 8057529695 8057530784 178
87 3300005367 Ga0070667_100198407 Ga0070667_1001984072 179
88 3300013105 Ga0157369_10071541 Ga0157369_100715414 179
89 3300025986 Ga0207658_10061410 Ga0207658_100614103 179
90 3300046524 Ga0495648_0000466 Ga0495648_0000466_11558_12214 179
91 3300048925 Ga0496122_0002860 Ga0496122_0002860_4158_4796 179
92 3300048926 Ga0496123_0001072 Ga0496123_0001072_28217_28855 179
93 3300053136 Ga0500559_0155521 Ga0500559_0155521_201_842 179
94 3300053138 Ga0500564_000028 Ga0500564_000028_11116_11784 179
95 iso_pu_bacteria 2643221588 2643951067 179
96 3300038705 Ga0237819_00130 Ga0237819_00130_24513_25154 180
97 3300039145 Ga0237816_00269 Ga0237816_00269_3006_3647 180
98 iso_pu_bacteria 2565956761 2566993667 180
99 iso_pu_bacteria 2643221574 2643884839 180
100 iso_pu_bacteria 2643221584 2643931150 180
101 iso_pu_bacteria 2643221699 2644549711 180
102 iso_pu_bacteria 2738541308 2738889007 180
103 iso_pu_bacteria 2896253425 2896253464 180
104 iso_pu_bacteria 2904535858 2904536756 180
105 iso_pu_bacteria 2922554459 2922555196 180
106 iso_pu_bacteria 8054302542 8054303199 180
107 iso_pu_bacteria 8057101203 8057105300 180
108 iso_pu_bacteria 2738543005 2739202765 181
109 iso_pu_bacteria 2775507255 2778125942 181
110 iso_pu_bacteria 2928142448 2928143019 181
111 3300002987 JGI25159J45721_1007061 JGI25159J45721_10070612 182
112 3300003187 JGI25151J46595_10000028 JGI25151J46595_1000002856 182
113 3300003187 JGI25151J46595_10000114 JGI25151J46595_10000114100 182
114 3300003771 Ga0055526_1001215 Ga0055526_10012154 182
115 3300003771 Ga0055526_1003557 Ga0055526_10035578 182
116 3300003775 Ga0055524_1000020 Ga0055524_1000020133 182
117 3300003784 Ga0055534_1012682 Ga0055534_10126821 182
118 3300005262 Ga0065165_1000551 Ga0065165_10005514 182
119 3300006038 Ga0075365_10406028 Ga0075365_104060282 182
120 3300025273 Ga0209673_1016106 Ga0209673_10161062 182
121 3300025284 Ga0209130_1000190 Ga0209130_100019049 182
122 3300025291 Ga0209675_1000629 Ga0209675_10006292 182
123 3300025294 Ga0209025_1000008 Ga0209025_1000008856 182
124 3300025294 Ga0209025_1014643 Ga0209025_10146432 182
125 3300025295 Ga0209564_1000049 Ga0209564_1000049256 182
126 3300025295 Ga0209564_1000065 Ga0209564_100006527 182
127 3300025297 Ga0209758_1064495 Ga0209758_10644951 182
128 3300025299 Ga0209256_1000014 Ga0209256_1000014383 182
129 3300025299 Ga0209256_1000200 Ga0209256_100020081 182
130 3300025302 Ga0207426_1004849 Ga0207426_10048497 182
131 3300037471 Ga0395905_0406766 Ga0395905_0406766_355_1011 182
132 3300046530 Ga0495654_0043911 Ga0495654_0043911_554_1192 182
133 3300048916 Ga0496113_0090761 Ga0496113_0090761_896_1537 182
134 3300048927 Ga0496124_0522515 Ga0496124_0522515_70_711 182
135 3300050516 nmdc:mga0sz30_31609_c1 nmdc:mga0sz30_31609_c1_192_830 182
136 3300053091 Ga0500647_0101246 Ga0500647_0101246_654_1292 182
137 3300053118 Ga0500594_0002835 Ga0500594_0002835_64_702 182
138 3300053122 Ga0500608_000538 Ga0500608_000538_2035_2673 182
139 3300053138 Ga0500564_000171 Ga0500564_000171_12215_12853 182
140 3300053723 Ga0500567_014627 Ga0500567_014627_2807_3445 182
141 3300053729 Ga0500625_000238 Ga0500625_000238_6883_7521 182
142 iso_pu_bacteria 2643221733 2644732156 182
143 3300006038 Ga0075365_10104831 Ga0075365_101048312 183
144 3300006042 Ga0075368_10000560 Ga0075368_100005607 183
145 3300006048 Ga0075363_100002123 Ga0075363_1000021236 183
146 3300006051 Ga0075364_10075080 Ga0075364_100750802 183
147 3300006177 Ga0075362_10001259 Ga0075362_100012595 183
148 3300006178 Ga0075367_10007398 Ga0075367_100073984 183
149 3300006195 Ga0075366_10037109 Ga0075366_100371094 183
150 3300006353 Ga0075370_10072522 Ga0075370_100725223 183
151 3300027866 Ga0209813_10000504 Ga0209813_100005043 183
152 3300028794 Ga0307515_10000004 Ga0307515_10000004553 183
153 3300049823 Ga0501044_0285831 Ga0501044_0285831_10_651 183
154 3300050489 nmdc:mga03683_150277_c1 nmdc:mga03683_150277_c1_141_782 183
155 3300050494 nmdc:mga06z11_55896_c1 nmdc:mga06z11_55896_c1_560_1201 183
156 3300050495 nmdc:mga04h51_410_c1 nmdc:mga04h51_410_c1_5953_6594 183
157 3300050496 nmdc:mga07m45_9_c1 nmdc:mga07m45_9_c1_98718_99359 183
158 3300050516 nmdc:mga0sz30_50_c1 nmdc:mga0sz30_50_c1_2957_3595 183
159 3300003791 Ga0055530_10019047 Ga0055530_100190473 184
160 3300005347 Ga0070668_100119356 Ga0070668_1001193562 184
161 3300005355 Ga0070671_100055204 Ga0070671_1000552042 184
162 3300005548 Ga0070665_100323638 Ga0070665_1003236382 184
163 3300005844 Ga0068862_100063492 Ga0068862_1000634923 184
164 3300006195 Ga0075366_10006304 Ga0075366_100063043 184
165 3300009177 Ga0105248_10054106 Ga0105248_100541065 184
166 3300025298 Ga0209050_1006316 Ga0209050_10063164 184
167 3300025931 Ga0207644_10047988 Ga0207644_100479884 184
168 3300025972 Ga0207668_10002117 Ga0207668_100021179 184
169 3300028380 Ga0268265_10220702 Ga0268265_102207021 184
170 3300032004 Ga0307414_10004354 Ga0307414_100043543 184
171 3300032004 Ga0307414_10168635 Ga0307414_101686352 184
172 3300032004 Ga0307414_10234718 Ga0307414_102347182 184
173 3300032004 Ga0307414_10355019 Ga0307414_103550192 184
174 3300037312 Ga0395899_0000003 Ga0395899_0000003_802509_803183 184
175 3300041509 Ga0451843_1194258 Ga0451843_1194258_188_844 184
176 3300046558 Ga0495633_0079622 Ga0495633_0079622_98_766 184
177 3300048920 Ga0496117_0003487 Ga0496117_0003487_10094_10756 184
178 3300048921 Ga0496118_0012405 Ga0496118_0012405_7475_8137 184
179 3300048924 Ga0496121_0003683 Ga0496121_0003683_622_1269 184
180 3300048924 Ga0496121_0183959 Ga0496121_0183959_378_1031 184
181 3300048924 Ga0496121_0313944 Ga0496121_0313944_83_730 184
182 3300048927 Ga0496124_0002572 Ga0496124_0002572_966_1613 184
183 3300048929 Ga0496126_0173432 Ga0496126_0173432_768_1436 184
184 3300050493 nmdc:mga0k408_6839_c1 nmdc:mga0k408_6839_c1_1451_2101 184
185 3300053117 Ga0500593_001757 Ga0500593_001757_3208_3855 184
186 3300053136 Ga0500559_0000015 Ga0500559_0000015_58290_58943 184
187 3300053136 Ga0500559_0003300 Ga0500559_0003300_66_713 184
188 3300053136 Ga0500559_0010956 Ga0500559_0010956_599_1324 184
189 3300053139 Ga0500568_0000002 Ga0500568_0000002_489756_490406 184
190 iso_pu_bacteria 2990265787 2990268396 184
191 iso_pu_bacteria 2993693658 2993696572 184
192 3300001904 JGI24736J21556_1000092 JGI24736J21556_10000925 185
193 3300001915 JGI24741J21665_1000050 JGI24741J21665_100005013 185
194 3300001979 JGI24740J21852_10001976 JGI24740J21852_100019763 185
195 3300001989 JGI24739J22299_10138349 JGI24739J22299_101383491 185
196 3300001990 JGI24737J22298_10071745 JGI24737J22298_100717452 185
197 3300002075 JGI24738J21930_10001605 JGI24738J21930_100016052 185
198 3300005289 Ga0065704_10103376 Ga0065704_101033762 185
199 3300005339 Ga0070660_100096685 Ga0070660_1000966852 185
200 3300005344 Ga0070661_100028460 Ga0070661_1000284602 185
201 3300005457 Ga0070662_100317086 Ga0070662_1003170862 185
202 3300005577 Ga0068857_100262463 Ga0068857_1002624632 185
203 3300005614 Ga0068856_100017541 Ga0068856_1000175413 185
204 3300025321 Ga0207656_10103736 Ga0207656_101037361 185
205 3300025909 Ga0207705_10152417 Ga0207705_101524172 185
206 3300025911 Ga0207654_10026963 Ga0207654_100269633 185
207 3300025913 Ga0207695_10309953 Ga0207695_103099532 185
208 3300025919 Ga0207657_10004343 Ga0207657_1000434310 185
209 3300025920 Ga0207649_10485788 Ga0207649_104857881 185
210 3300025924 Ga0207694_10902560 Ga0207694_109025601 185
211 3300025933 Ga0207706_10050209 Ga0207706_100502094 185
212 3300025949 Ga0207667_10106930 Ga0207667_101069302 185
213 3300025949 Ga0207667_10348142 Ga0207667_103481422 185
214 3300025981 Ga0207640_10039337 Ga0207640_100393371 185
215 3300025981 Ga0207640_10523634 Ga0207640_105236342 185
216 3300026041 Ga0207639_10000343 Ga0207639_1000034318 185
217 3300026067 Ga0207678_10000083 Ga0207678_1000008312 185
218 3300026078 Ga0207702_10011316 Ga0207702_100113163 185
219 3300026116 Ga0207674_10014271 Ga0207674_100142713 185
220 3300026142 Ga0207698_10047631 Ga0207698_100476313 185
221 3300026142 Ga0207698_10555141 Ga0207698_105551412 185
222 3300031548 Ga0307408_100537252 Ga0307408_1005372521 185
223 3300031995 Ga0307409_100063630 Ga0307409_1000636302 185
224 3300032002 Ga0307416_101002265 Ga0307416_1010022652 185
225 3300048913 Ga0496110_0020636 Ga0496110_0020636_4209_4856 185
226 3300048924 Ga0496121_0048217 Ga0496121_0048217_259_906 185
227 3300048925 Ga0496122_0026237 Ga0496122_0026237_3755_4402 185

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06912

DUF1275

Protein of unknown function (DUF1275)

37

230

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8sc1-assembly1.cif.gz_A human oct1 (apo) in inward-open conformation 0.563 7 176
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.5549 7 176
7lo7-assembly1.cif.gz_Z nora in complex with fab25 0.5537 6 175
4d2c-assembly1.cif.gz_A structure of a di peptide bound pot family peptide transporter 0.5483 1 183
8sc4-assembly1.cif.gz_A human oct1 bound to metformin in inward-open conformation 0.5479 7 176
ID Description Score Start End Superfamily
af_I1M3G2_109_523_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.619 7 184 1.20.1250.20
af_F7FL53_266_606_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6103 54 178 1.20.1250.20
af_G5EC34_39_523_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6072 7 181 1.20.1250.20
af_A0A0P0X7B4_1_270_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5908 7 183 1.20.1250.20
af_A0A0R4IKJ8_119_526_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5905 7 183 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A839QFY1-F1-model_v4 Uncharacterized membrane protein YoaK (UPF0700 family) 0.927 3 178 GO:0016020
AF-R7WND6-F1-model_v4 DUF1275 domain-containing protein 0.918 1 178 GO:0016020
AF-A0A7Y9MCV7-F1-model_v4 Uncharacterized membrane protein YoaK (UPF0700 family) 0.908 1 178 GO:0016020
AF-A0A848KFI4-F1-model_v4 DUF1275 domain-containing protein 0.9061 1 179 GO:0016020
AF-A0A4Q3UEY6-F1-model_v4 DUF1275 domain-containing protein 0.9059 1 183 GO:0016020

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pLDDT pTM Quality
77.96 0.79 High
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Predicted Structure (AlphaFold2)

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