F340264

General Info

Members Datasets Scaffolds Average Seq Length
227 181 454 349

Family's Representative Sequence

Representative Sequence 3300046462|Ga0495651_0109745|Ga0495651_0109745_505_1644
Length 379
Sequence MRFYRTKTERLAFSQNLSRRSNMMTGNSKRFLVTGGAGFIGSAVVRHLVRDTEHHVLVIDKLTYAGNLESLAPVAGDPRYELARVDIVDCKKVRKLFEQFQPDVVIHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAALAYWRALPHADRRQFRFHHVSTDEVFGSLGADGRFTETTSYAPRSPYSASKAASDHLVRSWHHTYGLPVLITNCSNNYGPYHFPEKLIPLTIINGLEGVELPVYGNGGNVRDWLYVEDHARALVTVAMAGRVGETYCVGGQSERANIDVVKAICALLDELAPSPEVGRREKLITFVADRPGHDLRYAIDPARMLNELGWEPLETFDTGLRKTVEWYLTNRAWWQRIRSGVYRAERLGVPA

Samples

Sample ID Description Type Environment
1 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
47 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
68 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
84 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
85 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
86 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
87 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
88 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
89 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
90 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
93 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
94 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
95 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
96 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
102 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
117 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
118 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
140 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
153 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
154 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
155 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
156 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
157 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
158 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
159 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
160 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
161 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
162 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
163 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
164 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
165 2643221736 Bosea sp. Root483D1 Isolate Unclassified
166 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
167 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
168 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
169 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
170 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
171 2841760612 Bosea sp. Tri-49 Isolate Nodule
172 2844104063 Bosea sp. Tri-39 Isolate Nodule
173 2851182111 Bosea sp. Tri-44 Isolate Nodule
174 2851246043 Bosea sp. Tri-54 Isolate Nodule
175 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
176 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
177 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
178 2932406140 Serratia sp. 2723 Isolate Rhizosphere
179 2939577877 Serratia sp. 509 Isolate Rhizosphere
180 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
181 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.75
Metatranscriptomes 0.88
Isolates 8.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.78
Nodule 3.08
Rhizoplane 9.69
Rhizosphere 66.96
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495651_0109745 3300046462 Bacteria 2042
2 JGI25406J46586_10009903 3300003203 Bacteria 4256
3 Ga0065165_1000132 3300005262 Bacteria 128732
4 Ga0070658_10113587 3300005327 Bacteria 2246
5 Ga0070676_10282468 3300005328 Bacteria 1119
6 Ga0070683_100039033 3300005329 Bacteria 4356
7 Ga0068869_100070153 3300005334 Bacteria 2592
8 Ga0070680_100013908 3300005336 Bacteria 6279
9 Ga0070687_100066337 3300005343 Bacteria 1922
10 Ga0070675_100232508 3300005354 Bacteria 1608
11 Ga0070713_100015321 3300005436 Bacteria 5725
12 Ga0070711_100064203 3300005439 Bacteria 2565
13 Ga0070662_100025428 3300005457 Bacteria 4088
14 Ga0070681_10222608 3300005458 Bacteria 1802
15 Ga0070681_10233830 3300005458 Bacteria 1752
16 Ga0070706_100157104 3300005467 Bacteria 2123
17 Ga0070706_100490923 3300005467 Bacteria 1143
18 Ga0070698_100144610 3300005471 Bacteria 2328
19 Ga0070699_100022020 3300005518 Bacteria 5490
20 Ga0070679_100005565 3300005530 Bacteria 11677
21 Ga0070679_100160343 3300005530 Bacteria 2224
22 Ga0068852_100390326 3300005616 Bacteria 1367
23 Ga0068859_100071171 3300005617 Bacteria 3513
24 Ga0068864_100211033 3300005618 Bacteria 1788
25 Ga0068860_100401188 3300005843 Bacteria 1357
26 Ga0070717_10204435 3300006028 Bacteria 1731
27 Ga0075365_10007895 3300006038 Bacteria 5995
28 Ga0075365_10110578 3300006038 Bacteria 1888
29 Ga0075362_10001377 3300006177 Bacteria 7711
30 Ga0075366_10003296 3300006195 Bacteria 8490
31 Ga0075370_10134681 3300006353 Bacteria 1443
32 Ga0075428_100156405 3300006844 Bacteria 2476
33 Ga0075434_100008644 3300006871 Bacteria 9485
34 Ga0097620_100071171 3300006931 Bacteria 3513
35 Ga0105240_10005566 3300009093 Bacteria 18739
36 Ga0111539_10077995 3300009094 Bacteria 3898
37 Ga0111539_10195233 3300009094 Bacteria 2361
38 Ga0111539_10401270 3300009094 Bacteria 1597
39 Ga0105245_10039989 3300009098 Bacteria 4175
40 Ga0114129_10040146 3300009147 Bacteria 6598
41 Ga0105243_10497377 3300009148 Bacteria 1154
42 Ga0105238_10160420 3300009551 Bacteria 2224
43 Ga0105239_10585552 3300010375 Bacteria 1272
44 Ga0105246_10077639 3300011119 Bacteria 2356
45 Ga0157373_10000162 3300013100 Bacteria 54140
46 Ga0163162_10373529 3300013306 Bacteria 1559
47 Ga0157375_10627390 3300013308 Bacteria 1232
48 Ga0163163_10060142 3300014325 Bacteria 3761
49 Ga0213872_10000995 3300021361 Bacteria 19804
50 Ga0213874_10028785 3300021377 Bacteria 1590
51 Ga0213876_10010506 3300021384 Bacteria 4964
52 Ga0209130_1000327 3300025284 Bacteria 54775
53 Ga0209025_1004962 3300025294 Bacteria 11136
54 Ga0209025_1025258 3300025294 Bacteria 3031
55 Ga0207426_1004218 3300025302 Bacteria 7147
56 Ga0207684_10095477 3300025910 Bacteria 2537
57 Ga0207654_10088469 3300025911 Bacteria 1882
58 Ga0207695_10013042 3300025913 Bacteria 9926
59 Ga0207671_10151750 3300025914 Bacteria 1790
60 Ga0207662_10042863 3300025918 Bacteria 2668
61 Ga0207657_10036385 3300025919 Bacteria 4406
62 Ga0207652_10135644 3300025921 Bacteria 2198
63 Ga0207694_10038775 3300025924 Bacteria 3664
64 Ga0207700_10082912 3300025928 Bacteria 2509
65 Ga0207706_10069558 3300025933 Bacteria 3096
66 Ga0207670_10069749 3300025936 Bacteria 2426
67 Ga0207661_10064793 3300025944 Bacteria 2964
68 Ga0207641_10105965 3300026088 Bacteria 2484
69 Ga0207674_10034009 3300026116 Bacteria 5332
70 Ga0207683_10133799 3300026121 Bacteria 2231
71 Ga0207698_10362634 3300026142 Bacteria 1373
72 Ga0209971_1013800 3300027682 Bacteria 1915
73 Ga0209966_1005179 3300027695 Bacteria 2231
74 Ga0265338_10008072 3300028800 Bacteria 12869
75 Ga0265760_10025751 3300031090 Bacteria 1719
76 Ga0265320_10034123 3300031240 Bacteria 2592
77 Ga0265325_10003975 3300031241 Bacteria 9464
78 Ga0265325_10008527 3300031241 Bacteria 6041
79 Ga0265340_10099724 3300031247 Bacteria 1351
80 Ga0265339_10000078 3300031249 Bacteria 83767
81 Ga0265339_10031828 3300031249 Bacteria 2978
82 Ga0265331_10061482 3300031250 Bacteria 1773
83 Ga0307513_10113918 3300031456 Bacteria 2691
84 Ga0265313_10000212 3300031595 Bacteria 62415
85 Ga0265313_10094016 3300031595 Bacteria 1340
86 Ga0265314_10039232 3300031711 Bacteria 3414
87 Ga0265342_10112841 3300031712 Bacteria 1537
88 Ga0307510_10258016 3300033180 Bacteria 1226
89 Ga0373937_0207190 3300036401 Bacteria 1844
90 Ga0373925_0218025 3300037068 Bacteria 1522
91 Ga0436364_1337555 3300037853 Bacteria 8926
92 Ga0436365_0376728 3300039437 Bacteria 9186
93 Ga0436361_0006123 3300039447 Bacteria 7543
94 Ga0436361_0321492 3300039447 Bacteria 10788
95 Ga0436361_0752593 3300039447 Bacteria 4297
96 Ga0439453_0015545 3300041408 Bacteria 1317
97 Ga0439452_000103 3300042010 Bacteria 70370
98 Ga0439435_0038301 3300042436 Bacteria 1332
99 Ga0466969_0000508 3300044656 Bacteria 21352
100 Ga0466972_0000312 3300044658 Bacteria 28150
101 Ga0466965_0047779 3300044683 Bacteria 2119
102 Ga0466966_0016966 3300044684 Bacteria 4812
103 Ga0466966_0044830 3300044684 Bacteria 2829
104 Ga0466961_0000271 3300044693 Bacteria 34668
105 Ga0466957_0230279 3300044842 Bacteria 1226
106 Ga0466960_0053948 3300044901 Bacteria 1950
107 Ga0466959_0000117 3300045049 Bacteria 51375
108 Ga0466958_0023351 3300045836 Bacteria 3630
109 Ga0495592_0204597 3300046454 Bacteria 1330
110 Ga0495638_0008701 3300046460 Bacteria 7175
111 Ga0495618_0127631 3300046514 Bacteria 1628
112 Ga0495628_0155591 3300046516 Bacteria 1739
113 Ga0495587_0039119 3300046536 Bacteria 2841
114 Ga0495635_0267179 3300046663 Bacteria 1151
115 Ga0495660_0021693 3300046810 Bacteria 3674
116 Ga0495674_0141006 3300047319 Bacteria 2026
117 Ga0495686_0000065 3300047472 Bacteria 225907
118 Ga0496101_0256241 3300048904 Bacteria 1364
119 Ga0496104_0012871 3300048907 Bacteria 7535
120 Ga0496104_0168768 3300048907 Bacteria 2099
121 Ga0496104_0516911 3300048907 Bacteria 1105
122 Ga0496105_0005515 3300048908 Bacteria 9603
123 Ga0496105_0060446 3300048908 Bacteria 3127
124 Ga0496105_0253354 3300048908 Bacteria 1426
125 Ga0496106_0270813 3300048909 Bacteria 1360
126 Ga0496106_0366215 3300048909 Bacteria 1158
127 Ga0496107_0061375 3300048910 Bacteria 2722
128 Ga0496109_0000839 3300048912 Bacteria 25665
129 Ga0496110_0062499 3300048913 Bacteria 3288
130 Ga0496111_0002183 3300048914 Bacteria 11720
131 Ga0496112_0026191 3300048915 Bacteria 5608
132 Ga0496112_0087793 3300048915 Bacteria 3077
133 Ga0496112_0218603 3300048915 Bacteria 1862
134 Ga0496112_0259143 3300048915 Bacteria 1689
135 Ga0496112_0338032 3300048915 Bacteria 1449
136 Ga0496113_0008534 3300048916 Bacteria 6682
137 Ga0496113_0038668 3300048916 Bacteria 3509
138 Ga0496114_0065674 3300048917 Bacteria 3040
139 Ga0496115_0009381 3300048918 Bacteria 7271
140 Ga0496117_0088013 3300048920 Bacteria 2011
141 Ga0496121_0000573 3300048924 Bacteria 69111
142 Ga0496122_0032281 3300048925 Bacteria 4335
143 Ga0496125_0000341 3300048928 Bacteria 89076
144 Ga0496126_0124153 3300048929 Bacteria 2236
145 Ga0501315_001448 3300049531 Bacteria 2038
146 Ga0501032_0003514 3300049569 Bacteria 11971
147 Ga0501033_0177941 3300049570 Bacteria 1525
148 Ga0501034_0001162 3300049571 Bacteria 36485
149 Ga0501034_0006944 3300049571 Bacteria 12103
150 Ga0501034_0082824 3300049571 Bacteria 3210
151 Ga0501034_0418935 3300049571 Bacteria 1260
152 Ga0501036_0008612 3300049572 Bacteria 8370
153 Ga0501037_0182720 3300049573 Bacteria 1487
154 Ga0501038_0000019 3300049574 Bacteria 154763
155 Ga0501038_0011373 3300049574 Bacteria 8122
156 Ga0501038_0062526 3300049574 Bacteria 3181
157 Ga0501039_0003066 3300049575 Bacteria 12496
158 Ga0501043_0014039 3300049579 Bacteria 6268
159 Ga0501043_0263173 3300049579 Bacteria 1326
160 Ga0501046_0199866 3300049580 Bacteria 1487
161 Ga0501067_0000919 3300049583 Bacteria 15812
162 Ga0501067_0017026 3300049583 Bacteria 4016
163 Ga0501069_0004823 3300049585 Bacteria 6983
164 Ga0501071_0069003 3300049587 Bacteria 2573
165 Ga0501073_0000023 3300049589 Bacteria 129568
166 Ga0501073_0003978 3300049589 Bacteria 11086
167 Ga0501073_0227533 3300049589 Bacteria 1288
168 Ga0501074_0008981 3300049590 Bacteria 7251
169 Ga0501077_0000814 3300049593 Bacteria 18937
170 Ga0501079_0027244 3300049741 Bacteria 4381
171 Ga0501080_0005555 3300049742 Bacteria 11263
172 Ga0501080_0064842 3300049742 Bacteria 3398
173 Ga0501083_0015187 3300049744 Bacteria 5392
174 Ga0501044_0001648 3300049823 Bacteria 26221
175 Ga0501044_0018098 3300049823 Bacteria 7555
176 Ga0501044_0037449 3300049823 Bacteria 5071
177 Ga0501044_0041527 3300049823 Bacteria 4789
178 Ga0501044_0100174 3300049823 Bacteria 2916
179 Ga0501044_0125083 3300049823 Bacteria 2569
180 nmdc:mga03683_64285_c1 3300050489 Bacteria 1557
181 nmdc:mga03n38_2362_c1 3300050490 Bacteria 5809
182 nmdc:mga00v17_103167_c1 3300050491 Bacteria 1802
183 nmdc:mga00v17_24168_c1 3300050491 Bacteria 3522
184 nmdc:mga00v17_60355_c1 3300050491 Bacteria 2328
185 nmdc:mga00v17_68214_c1 3300050491 Bacteria 2198
186 nmdc:mga0yw44_17002_c1 3300050492 Bacteria 3946
187 nmdc:mga0k408_74329_c1 3300050493 Bacteria 1986
188 nmdc:mga06z11_125021_c1 3300050494 Bacteria 1438
189 nmdc:mga08y16_134743_c1 3300050511 Bacteria 2567
190 nmdc:mga08y16_299607_c1 3300050511 Bacteria 1657
191 nmdc:mga0n895_60259_c1 3300050512 Bacteria 3745
192 nmdc:mga0a205_8045_c1 3300050515 Bacteria 8504
193 Ga0495601_0025905 3300053077 Bacteria 3618
194 Ga0495612_0021742 3300053078 Bacteria 2573
195 Ga0495619_0016568 3300053085 Bacteria 4666
196 Ga0500641_0046754 3300053096 Bacteria 1767
197 Ga0500607_000001 3300053121 Bacteria 185408
198 Ga0500559_0000361 3300053136 Bacteria 33778
199 Ga0500559_0000971 3300053136 Bacteria 17934
200 Ga0500590_093953 3300053148 Bacteria 1452
201 Ga0500604_0010190 3300053151 Bacteria 2511
202 Ga0500622_0000166 3300053156 Bacteria 70429
203 Ga0500622_0007285 3300053156 Bacteria 6298
204 Ga0500637_0011539 3300053178 Bacteria 4575
205 Ga0500645_000645 3300053730 Bacteria 22128
206 Ga0501082_0000073 3300060353 Bacteria 73297
207 Ga0501082_0000906 3300060353 Bacteria 26083
208 Ga0466962_0030672 3300061719 Bacteria 2575
209 2509080250 2508501114 Bacteria 7082538
210 2644743532 2643221736 Bacteria 6608466
211 2656277246 2654587920 Bacteria 5475511
212 2776261548 2775506901 Bacteria 9631051
213 2824706754 2824704595 Bacteria 9667483
214 2824760479 2824753945 Bacteria 9787441
215 2824768129 2824763712 Bacteria 9792355
216 2841764564 2841760612 Bacteria 6454112
217 2844107988 2844104063 Bacteria 6440972
218 2851186613 2851182111 Bacteria 6047226
219 2851187919 2851182111 Bacteria 6047226
220 2851250094 2851246043 Bacteria 6439203
221 2869551977 2869551831 Bacteria 5474685
222 2884298975 2884298095 Bacteria 3823049
223 2904712826 2904711408 Bacteria 9771557
224 2932409021 2932406140 Bacteria 5134491
225 2939581675 2939577877 Bacteria 5132791
226 3001895048 3001892409 Bacteria 6328293
227 8057533362 8057529695 Bacteria 6306553
228 Ga0495651_0109745
229 JGI25406J46586_10009903
230 Ga0065165_1000132
231 Ga0070658_10113587
232 Ga0070676_10282468
233 Ga0070683_100039033
234 Ga0068869_100070153
235 Ga0070680_100013908
236 Ga0070687_100066337
237 Ga0070675_100232508
238 Ga0070713_100015321
239 Ga0070711_100064203
240 Ga0070662_100025428
241 Ga0070681_10222608
242 Ga0070681_10233830
243 Ga0070706_100157104
244 Ga0070706_100490923
245 Ga0070698_100144610
246 Ga0070699_100022020
247 Ga0070679_100005565
248 Ga0070679_100160343
249 Ga0068852_100390326
250 Ga0068859_100071171
251 Ga0068864_100211033
252 Ga0068860_100401188
253 Ga0070717_10204435
254 Ga0075365_10007895
255 Ga0075365_10110578
256 Ga0075362_10001377
257 Ga0075366_10003296
258 Ga0075370_10134681
259 Ga0075428_100156405
260 Ga0075434_100008644
261 Ga0097620_100071171
262 Ga0105240_10005566
263 Ga0111539_10077995
264 Ga0111539_10195233
265 Ga0111539_10401270
266 Ga0105245_10039989
267 Ga0114129_10040146
268 Ga0105243_10497377
269 Ga0105238_10160420
270 Ga0105239_10585552
271 Ga0105246_10077639
272 Ga0157373_10000162
273 Ga0163162_10373529
274 Ga0157375_10627390
275 Ga0163163_10060142
276 Ga0213872_10000995
277 Ga0213874_10028785
278 Ga0213876_10010506
279 Ga0209130_1000327
280 Ga0209025_1004962
281 Ga0209025_1025258
282 Ga0207426_1004218
283 Ga0207684_10095477
284 Ga0207654_10088469
285 Ga0207695_10013042
286 Ga0207671_10151750
287 Ga0207662_10042863
288 Ga0207657_10036385
289 Ga0207652_10135644
290 Ga0207694_10038775
291 Ga0207700_10082912
292 Ga0207706_10069558
293 Ga0207670_10069749
294 Ga0207661_10064793
295 Ga0207641_10105965
296 Ga0207674_10034009
297 Ga0207683_10133799
298 Ga0207698_10362634
299 Ga0209971_1013800
300 Ga0209966_1005179
301 Ga0265338_10008072
302 Ga0265760_10025751
303 Ga0265320_10034123
304 Ga0265325_10003975
305 Ga0265325_10008527
306 Ga0265340_10099724
307 Ga0265339_10000078
308 Ga0265339_10031828
309 Ga0265331_10061482
310 Ga0307513_10113918
311 Ga0265313_10000212
312 Ga0265313_10094016
313 Ga0265314_10039232
314 Ga0265342_10112841
315 Ga0307510_10258016
316 Ga0373937_0207190
317 Ga0373925_0218025
318 Ga0436364_1337555
319 Ga0436365_0376728
320 Ga0436361_0006123
321 Ga0436361_0321492
322 Ga0436361_0752593
323 Ga0439453_0015545
324 Ga0439452_000103
325 Ga0439435_0038301
326 Ga0466969_0000508
327 Ga0466972_0000312
328 Ga0466965_0047779
329 Ga0466966_0016966
330 Ga0466966_0044830
331 Ga0466961_0000271
332 Ga0466957_0230279
333 Ga0466960_0053948
334 Ga0466959_0000117
335 Ga0466958_0023351
336 Ga0495592_0204597
337 Ga0495638_0008701
338 Ga0495618_0127631
339 Ga0495628_0155591
340 Ga0495587_0039119
341 Ga0495635_0267179
342 Ga0495660_0021693
343 Ga0495674_0141006
344 Ga0495686_0000065
345 Ga0496101_0256241
346 Ga0496104_0012871
347 Ga0496104_0168768
348 Ga0496104_0516911
349 Ga0496105_0005515
350 Ga0496105_0060446
351 Ga0496105_0253354
352 Ga0496106_0270813
353 Ga0496106_0366215
354 Ga0496107_0061375
355 Ga0496109_0000839
356 Ga0496110_0062499
357 Ga0496111_0002183
358 Ga0496112_0026191
359 Ga0496112_0087793
360 Ga0496112_0218603
361 Ga0496112_0259143
362 Ga0496112_0338032
363 Ga0496113_0008534
364 Ga0496113_0038668
365 Ga0496114_0065674
366 Ga0496115_0009381
367 Ga0496117_0088013
368 Ga0496121_0000573
369 Ga0496122_0032281
370 Ga0496125_0000341
371 Ga0496126_0124153
372 Ga0501315_001448
373 Ga0501032_0003514
374 Ga0501033_0177941
375 Ga0501034_0001162
376 Ga0501034_0006944
377 Ga0501034_0082824
378 Ga0501034_0418935
379 Ga0501036_0008612
380 Ga0501037_0182720
381 Ga0501038_0000019
382 Ga0501038_0011373
383 Ga0501038_0062526
384 Ga0501039_0003066
385 Ga0501043_0014039
386 Ga0501043_0263173
387 Ga0501046_0199866
388 Ga0501067_0000919
389 Ga0501067_0017026
390 Ga0501069_0004823
391 Ga0501071_0069003
392 Ga0501073_0000023
393 Ga0501073_0003978
394 Ga0501073_0227533
395 Ga0501074_0008981
396 Ga0501077_0000814
397 Ga0501079_0027244
398 Ga0501080_0005555
399 Ga0501080_0064842
400 Ga0501083_0015187
401 Ga0501044_0001648
402 Ga0501044_0018098
403 Ga0501044_0037449
404 Ga0501044_0041527
405 Ga0501044_0100174
406 Ga0501044_0125083
407 nmdc:mga03683_64285_c1
408 nmdc:mga03n38_2362_c1
409 nmdc:mga00v17_103167_c1
410 nmdc:mga00v17_24168_c1
411 nmdc:mga00v17_60355_c1
412 nmdc:mga00v17_68214_c1
413 nmdc:mga0yw44_17002_c1
414 nmdc:mga0k408_74329_c1
415 nmdc:mga06z11_125021_c1
416 nmdc:mga08y16_134743_c1
417 nmdc:mga08y16_299607_c1
418 nmdc:mga0n895_60259_c1
419 nmdc:mga0a205_8045_c1
420 Ga0495601_0025905
421 Ga0495612_0021742
422 Ga0495619_0016568
423 Ga0500641_0046754
424 Ga0500607_000001
425 Ga0500559_0000361
426 Ga0500559_0000971
427 Ga0500590_093953
428 Ga0500604_0010190
429 Ga0500622_0000166
430 Ga0500622_0007285
431 Ga0500637_0011539
432 Ga0500645_000645
433 Ga0501082_0000073
434 Ga0501082_0000906
435 Ga0466962_0030672
436 2509080250
437 2644743532
438 2656277246
439 2776261548
440 2824706754
441 2824760479
442 2824768129
443 2841764564
444 2844107988
445 2851186613
446 2851187919
447 2851250094
448 2869551977
449 2884298975
450 2904712826
451 2932409021
452 2939581675
453 3001895048
454 8057533362

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

31

278

0.95

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

32

351

0.92

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

31

144

0.86

PF04321

RmlD_sub_bind

RmlD substrate binding domain

29

209

0.86

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

32

273

0.75

PF07993

NAD_binding_4

Male sterility protein

33

225

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bi4-assembly2.cif.gz_B 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9679 3 340
6bi4-assembly2.cif.gz_C 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.966 3 340
6bi4-assembly2.cif.gz_B 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9617 3 340
6bi4-assembly2.cif.gz_C 2.9 angstrom resolution crystal structure of dtdp-glucose 4,6-dehydratase (rfbb) from bacillus anthracis str. ames in complex with nad. 0.9599 3 340
1g1a-assembly1.cif.gz_A the crystal structure of dtdp-d-glucose 4,6-dehydratase (rmlb)from salmonella enterica serovar typhimurium 0.9598 5 346
ID Description Score Start End Superfamily
1bxkA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9459 4 320 3.40.50.720
4egbB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9457 5 316 3.40.50.720
1bxkA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9385 4 320 3.40.50.720
4egbB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9368 5 316 3.40.50.720
6bwlA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9237 5 254 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A382YHF9-F1-model_v4 NAD(P)-binding domain-containing protein 1.002 5 75
AF-A0A662ZRW6-F1-model_v4 deleted 0.9893 174 333
AF-A0A444QZH8-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9777 156 324
AF-A0A5C6M0R7-F1-model_v4 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.9722 4 319 GO:0008460
GO:0009225
GO:0016491
AF-A0A2X1PPC2-F1-model_v4 dTDP-glucose 46-dehydratase (EC 4.2.1.46) 0.9721 184 277 GO:0008460

Map