F339950

General Info

Members Datasets Scaffolds Average Seq Length
227 153 454 198

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10965155|Ga0157380_109651552
Length 215
Sequence MWPAFDQMDTLYLVAGLGNPGAEYSRTRHNAGFIVVERFGKKFSAAWKDAPKFQSRVSRIEAGVGKTGGRKVILCEPQTYMNASGEAIVPLAAYYKVPPERILVVVDDADLPFGQIRLRAEGSSGGHHGLESIEQHLGTRQFARLRVGIGRTERGLREITGHVLGKFSAEEAEILEKVLERTAAQIECFLEEGVRKAMSQFNGSVIPPPVKKEEK

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
81 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
82 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
83 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
84 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
85 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
86 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
87 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
88 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
89 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
100 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
101 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
102 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
128 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
129 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
151 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
152 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
153 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 1.32
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 0
Rhizosphere 98.68
Stem 0
Stem Tuber 0
Unclassified 30.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10965155 3300014326 Unclassified 883
2 Ga0058863_10045919 3300004799 Unclassified 2640
3 Ga0070658_10020046 3300005327 Bacteria 5356
4 Ga0070683_100429419 3300005329 Unclassified 1260
5 Ga0070690_100039609 3300005330 Unclassified 2977
6 Ga0070690_100116705 3300005330 Bacteria 1787
7 Ga0070677_10022767 3300005333 Unclassified 2311
8 Ga0068869_100154993 3300005334 Bacteria 1779
9 Ga0070660_100673101 3300005339 Bacteria 867
10 Ga0070689_100024370 3300005340 Bacteria 4538
11 Ga0070689_100052080 3300005340 Unclassified 3165
12 Ga0070689_100062483 3300005340 Bacteria 2898
13 Ga0070689_100399804 3300005340 Bacteria 1161
14 Ga0070689_100774603 3300005340 Unclassified 842
15 Ga0070691_10042751 3300005341 Unclassified 2145
16 Ga0070675_100159444 3300005354 Bacteria 1939
17 Ga0070688_100004400 3300005365 Bacteria 7324
18 Ga0070688_100017670 3300005365 Bacteria 4097
19 Ga0070714_100119185 3300005435 Unclassified 2346
20 Ga0070713_101183512 3300005436 Bacteria 740
21 Ga0070701_10002361 3300005438 Bacteria 7251
22 Ga0070711_100097399 3300005439 Bacteria 2133
23 Ga0070705_100015074 3300005440 Bacteria 3989
24 Ga0070700_100178008 3300005441 Bacteria 1478
25 Ga0070694_100025824 3300005444 Unclassified 3803
26 Ga0070681_10026491 3300005458 Bacteria 5826
27 Ga0070681_10056358 3300005458 Bacteria 3911
28 Ga0070685_10035938 3300005466 Bacteria 2799
29 Ga0070685_10081057 3300005466 Bacteria 1945
30 Ga0070706_100085138 3300005467 Bacteria 2929
31 Ga0070679_100040024 3300005530 Bacteria 4662
32 Ga0070679_100533197 3300005530 Unclassified 1118
33 Ga0070697_100246420 3300005536 Bacteria 1527
34 Ga0070672_101067136 3300005543 Unclassified 717
35 Ga0070686_100007698 3300005544 Bacteria 6021
36 Ga0068855_100015729 3300005563 Bacteria 9102
37 Ga0068855_100082910 3300005563 Unclassified 3715
38 Ga0068857_100688956 3300005577 Bacteria 970
39 Ga0070702_100189567 3300005615 Bacteria 1352
40 Ga0068859_100483991 3300005617 Bacteria 1333
41 Ga0068859_100495917 3300005617 Bacteria 1316
42 Ga0068859_101094396 3300005617 Unclassified 876
43 Ga0068864_100719343 3300005618 Bacteria 976
44 Ga0068861_100098781 3300005719 Bacteria 2318
45 Ga0068860_100525880 3300005843 Bacteria 1183
46 Ga0068862_100566949 3300005844 Unclassified 1086
47 Ga0068862_100632844 3300005844 Bacteria 1030
48 Ga0068862_100659172 3300005844 Bacteria 1010
49 Ga0068862_100739176 3300005844 Bacteria 956
50 Ga0070717_10389338 3300006028 Bacteria 1251
51 Ga0070716_100335405 3300006173 Bacteria 1065
52 Ga0097621_100408773 3300006237 Bacteria 1216
53 Ga0068871_100161145 3300006358 Bacteria 1919
54 Ga0075428_100134726 3300006844 Unclassified 2686
55 Ga0075428_100606696 3300006844 Bacteria 1169
56 Ga0075428_101649053 3300006844 Bacteria 670
57 Ga0075430_100449428 3300006846 Unclassified 1063
58 Ga0075433_10107994 3300006852 Unclassified 2468
59 Ga0097620_100483981 3300006931 Bacteria 1333
60 Ga0097620_100495911 3300006931 Bacteria 1316
61 Ga0097620_101094362 3300006931 Unclassified 876
62 Ga0105240_10065880 3300009093 Bacteria 4495
63 Ga0105240_10450139 3300009093 Unclassified 1441
64 Ga0105240_10928878 3300009093 Unclassified 934
65 Ga0111539_10334332 3300009094 Bacteria 1763
66 Ga0105241_10740027 3300009174 Bacteria 901
67 Ga0105242_10318056 3300009176 Bacteria 1427
68 Ga0105237_10576340 3300009545 Bacteria 1132
69 Ga0105238_10032407 3300009551 Bacteria 5318
70 Ga0105238_10128578 3300009551 Unclassified 2512
71 Ga0105238_10174750 3300009551 Unclassified 2124
72 Ga0105238_10378176 3300009551 Bacteria 1407
73 Ga0105249_11758817 3300009553 Unclassified 692
74 Ga0157370_10020139 3300013104 Bacteria 6668
75 Ga0157370_10327855 3300013104 Bacteria 1412
76 Ga0157369_11397136 3300013105 Bacteria 713
77 Ga0157372_11526130 3300013307 Unclassified 769
78 Ga0157375_11876366 3300013308 Bacteria 711
79 Ga0163163_10000049 3300014325 Bacteria 130036
80 Ga0163163_10084382 3300014325 Unclassified 3182
81 Ga0157377_10056493 3300014745 Bacteria 2229
82 Ga0157377_10374292 3300014745 Bacteria 962
83 Ga0207705_10217611 3300025909 Unclassified 1450
84 Ga0207684_10084335 3300025910 Bacteria 2706
85 Ga0207707_10094357 3300025912 Bacteria 2614
86 Ga0207707_10141411 3300025912 Bacteria 2104
87 Ga0207695_10084638 3300025913 Bacteria 3201
88 Ga0207660_10586503 3300025917 Bacteria 907
89 Ga0207652_10321668 3300025921 Bacteria 1396
90 Ga0207694_10137344 3300025924 Bacteria 1964
91 Ga0207694_10530350 3300025924 Bacteria 987
92 Ga0207659_10611724 3300025926 Bacteria 929
93 Ga0207700_10110596 3300025928 Bacteria 2210
94 Ga0207686_10517884 3300025934 Bacteria 928
95 Ga0207670_10057075 3300025936 Bacteria 2647
96 Ga0207670_10078344 3300025936 Bacteria 2305
97 Ga0207670_10584799 3300025936 Unclassified 915
98 Ga0207670_10619093 3300025936 Bacteria 890
99 Ga0207670_10620064 3300025936 Unclassified 890
100 Ga0207689_10230503 3300025942 Bacteria 1530
101 Ga0207661_10169293 3300025944 Unclassified 1901
102 Ga0207667_10100733 3300025949 Unclassified 2980
103 Ga0207667_10435306 3300025949 Unclassified 1333
104 Ga0207712_10079046 3300025961 Bacteria 2388
105 Ga0207708_10019995 3300026075 Bacteria 5049
106 Ga0207702_10213532 3300026078 Bacteria 1795
107 Ga0207702_10244415 3300026078 Bacteria 1683
108 Ga0207641_10091657 3300026088 Bacteria 2660
109 Ga0207648_10098212 3300026089 Bacteria 2564
110 Ga0207674_10175563 3300026116 Bacteria 2095
111 Ga0207674_10637140 3300026116 Bacteria 1029
112 Ga0207674_10949465 3300026116 Bacteria 828
113 Ga0207675_100130839 3300026118 Bacteria 2380
114 Ga0207698_10540048 3300026142 Bacteria 1141
115 Ga0268265_10353367 3300028380 Unclassified 1343
116 Ga0268265_10421786 3300028380 Bacteria 1239
117 Ga0268264_10969444 3300028381 Bacteria 856
118 Ga0265337_1118271 3300028556 Unclassified 719
119 Ga0265326_10037499 3300028558 Unclassified 1378
120 Ga0265334_10006275 3300028573 Bacteria 5136
121 Ga0265336_10000836 3300028666 Bacteria 16045
122 Ga0265338_10000008 3300028800 Bacteria 481542
123 Ga0265338_10000836 3300028800 Bacteria 51897
124 Ga0265338_10001224 3300028800 Bacteria 42394
125 Ga0265338_10001643 3300028800 Bacteria 35770
126 Ga0265338_10004555 3300028800 Bacteria 18659
127 Ga0265338_10022110 3300028800 Bacteria 6604
128 Ga0265338_10068445 3300028800 Bacteria 3058
129 Ga0265338_10171455 3300028800 Bacteria 1663
130 Ga0265338_10628726 3300028800 Bacteria 746
131 Ga0265324_10002960 3300029957 Unclassified 8313
132 Ga0265324_10008695 3300029957 Bacteria 4015
133 Ga0265324_10065962 3300029957 Bacteria 1235
134 Ga0265324_10081693 3300029957 Unclassified 1099
135 Ga0265324_10132769 3300029957 Bacteria 845
136 Ga0265328_10089661 3300031239 Unclassified 1136
137 Ga0265320_10016284 3300031240 Bacteria 4171
138 Ga0265320_10183330 3300031240 Bacteria 938
139 Ga0265320_10202622 3300031240 Unclassified 886
140 Ga0265340_10097856 3300031247 Bacteria 1366
141 Ga0265340_10269739 3300031247 Unclassified 757
142 Ga0265339_10011701 3300031249 Bacteria 5387
143 Ga0265339_10046152 3300031249 Unclassified 2396
144 Ga0265339_10050790 3300031249 Unclassified 2266
145 Ga0265327_10001858 3300031251 Bacteria 24482
146 Ga0265327_10027993 3300031251 Bacteria 3234
147 Ga0265316_10094526 3300031344 Unclassified 2277
148 Ga0265314_10005913 3300031711 Bacteria 10940
149 Ga0265314_10107791 3300031711 Bacteria 1777
150 Ga0265314_10168608 3300031711 Eukaryota 1324
151 Ga0265314_10175998 3300031711 Unclassified 1287
152 Ga0316576_10071683 3300031727 Bacteria 2556
153 Ga0307405_10124195 3300031731 Bacteria 1772
154 Ga0307407_10590477 3300031903 Bacteria 826
155 Ga0307416_100202523 3300032002 Bacteria 1885
156 Ga0316593_10017113 3300032168 Bacteria 2207
157 Ga0316596_1001414 3300033541 Bacteria 4829
158 Ga0373926_0031808 3300035083 Bacteria 1861
159 Ga0373953_0173106 3300035117 Unclassified 930
160 Ga0373954_0063137 3300035118 Unclassified 1750
161 Ga0373946_0173429 3300035171 Bacteria 1019
162 Ga0373931_0719073 3300035691 Unclassified 661
163 Ga0373935_0310035 3300035692 Bacteria 1117
164 Ga0373927_0012159 3300035695 Bacteria 5726
165 Ga0373927_0029709 3300035695 Unclassified 3564
166 Ga0373947_0034434 3300035725 Bacteria 2995
167 Ga0373937_0186652 3300036401 Unclassified 1948
168 Ga0373925_0039202 3300037068 Unclassified 3504
169 Ga0373925_0082760 3300037068 Bacteria 2443
170 Ga0373925_0318924 3300037068 Unclassified 1257
171 Ga0451577_0035196 3300042876 Bacteria 4511
172 Ga0451577_0853595 3300042876 Unclassified 821
173 Ga0451577_1032654 3300042876 Bacteria 737
174 Ga0453684_0013422 3300044712 Bacteria 13304
175 Ga0466957_0794329 3300044842 Bacteria 672
176 Ga0451576_0137732 3300045051 Bacteria 2546
177 Ga0451576_0274921 3300045051 Bacteria 1761
178 Ga0451576_0777595 3300045051 Bacteria 1005
179 Ga0495592_0000315 3300046454 Bacteria 40668
180 Ga0495592_0043302 3300046454 Bacteria 3368
181 Ga0495651_0390943 3300046462 Bacteria 910
182 Ga0495639_0373753 3300046475 Bacteria 718
183 Ga0495662_0015663 3300046476 Bacteria 3680
184 Ga0495664_0027447 3300046477 Bacteria 3319
185 Ga0495618_0008156 3300046514 Bacteria 6346
186 Ga0495628_0000127 3300046516 Bacteria 63790
187 Ga0495628_0437798 3300046516 Unclassified 951
188 Ga0495628_0537774 3300046516 Unclassified 840
189 Ga0495628_0714552 3300046516 Eukaryota 707
190 Ga0495630_0176547 3300046517 Bacteria 1628
191 Ga0495666_0124568 3300046526 Bacteria 1205
192 Ga0495652_0057511 3300046529 Unclassified 3297
193 Ga0495640_0031755 3300046533 Unclassified 3767
194 Ga0495586_0000930 3300046535 Bacteria 16619
195 Ga0495645_0009409 3300046543 Bacteria 6829
196 Ga0495599_0016977 3300046678 Unclassified 4523
197 Ga0495647_0074113 3300046681 Bacteria 1368
198 Ga0495658_0272405 3300046683 Bacteria 1067
199 Ga0495624_0433994 3300046690 Unclassified 787
200 Ga0495604_0081893 3300047317 Unclassified 2415
201 Ga0495674_0014682 3300047319 Bacteria 7329
202 Ga0495680_0115283 3300047322 Unclassified 1988
203 Ga0495675_0192660 3300047444 Bacteria 1244
204 Ga0495684_0594201 3300047471 Bacteria 748
205 Ga0495602_0566900 3300048088 Unclassified 785
206 Ga0501032_0033815 3300049569 Bacteria 3502
207 Ga0501033_0048200 3300049570 Unclassified 3165
208 Ga0501033_0049085 3300049570 Bacteria 3134
209 Ga0501034_0037164 3300049571 Bacteria 4931
210 Ga0501034_0173431 3300049571 Unclassified 2123
211 Ga0501036_0206865 3300049572 Bacteria 1650
212 Ga0501037_0581064 3300049573 Bacteria 754
213 Ga0501043_0020213 3300049579 Bacteria 5228
214 Ga0501047_0376528 3300049581 Unclassified 1254
215 Ga0501035_0190467 3300049822 Bacteria 1763
216 Ga0501044_0015650 3300049823 Bacteria 8168
217 Ga0501044_0426249 3300049823 Unclassified 1236
218 nmdc:mga05p37_108551_c1 3300050507 Bacteria 3414
219 nmdc:mga05p37_1224223_c1 3300050507 Unclassified 773
220 nmdc:mga0qj67_462134_c1 3300050509 Unclassified 1022
221 nmdc:mga08y16_1101890_c1 3300050511 Unclassified 769
222 nmdc:mga08x19_593997_c1 3300050514 Unclassified 784
223 nmdc:mga0a205_429797_c1 3300050515 Bacteria 1182
224 Ga0500650_0026661 3300053098 Bacteria 2594
225 Ga0500595_068760 3300053119 Bacteria 1054
226 Ga0500636_0089811 3300053177 Bacteria 1761
227 Ga0590071_047372 3300059421 Unclassified 1040
228 Ga0157380_10965155
229 Ga0058863_10045919
230 Ga0070658_10020046
231 Ga0070683_100429419
232 Ga0070690_100039609
233 Ga0070690_100116705
234 Ga0070677_10022767
235 Ga0068869_100154993
236 Ga0070660_100673101
237 Ga0070689_100024370
238 Ga0070689_100052080
239 Ga0070689_100062483
240 Ga0070689_100399804
241 Ga0070689_100774603
242 Ga0070691_10042751
243 Ga0070675_100159444
244 Ga0070688_100004400
245 Ga0070688_100017670
246 Ga0070714_100119185
247 Ga0070713_101183512
248 Ga0070701_10002361
249 Ga0070711_100097399
250 Ga0070705_100015074
251 Ga0070700_100178008
252 Ga0070694_100025824
253 Ga0070681_10026491
254 Ga0070681_10056358
255 Ga0070685_10035938
256 Ga0070685_10081057
257 Ga0070706_100085138
258 Ga0070679_100040024
259 Ga0070679_100533197
260 Ga0070697_100246420
261 Ga0070672_101067136
262 Ga0070686_100007698
263 Ga0068855_100015729
264 Ga0068855_100082910
265 Ga0068857_100688956
266 Ga0070702_100189567
267 Ga0068859_100483991
268 Ga0068859_100495917
269 Ga0068859_101094396
270 Ga0068864_100719343
271 Ga0068861_100098781
272 Ga0068860_100525880
273 Ga0068862_100566949
274 Ga0068862_100632844
275 Ga0068862_100659172
276 Ga0068862_100739176
277 Ga0070717_10389338
278 Ga0070716_100335405
279 Ga0097621_100408773
280 Ga0068871_100161145
281 Ga0075428_100134726
282 Ga0075428_100606696
283 Ga0075428_101649053
284 Ga0075430_100449428
285 Ga0075433_10107994
286 Ga0097620_100483981
287 Ga0097620_100495911
288 Ga0097620_101094362
289 Ga0105240_10065880
290 Ga0105240_10450139
291 Ga0105240_10928878
292 Ga0111539_10334332
293 Ga0105241_10740027
294 Ga0105242_10318056
295 Ga0105237_10576340
296 Ga0105238_10032407
297 Ga0105238_10128578
298 Ga0105238_10174750
299 Ga0105238_10378176
300 Ga0105249_11758817
301 Ga0157370_10020139
302 Ga0157370_10327855
303 Ga0157369_11397136
304 Ga0157372_11526130
305 Ga0157375_11876366
306 Ga0163163_10000049
307 Ga0163163_10084382
308 Ga0157377_10056493
309 Ga0157377_10374292
310 Ga0207705_10217611
311 Ga0207684_10084335
312 Ga0207707_10094357
313 Ga0207707_10141411
314 Ga0207695_10084638
315 Ga0207660_10586503
316 Ga0207652_10321668
317 Ga0207694_10137344
318 Ga0207694_10530350
319 Ga0207659_10611724
320 Ga0207700_10110596
321 Ga0207686_10517884
322 Ga0207670_10057075
323 Ga0207670_10078344
324 Ga0207670_10584799
325 Ga0207670_10619093
326 Ga0207670_10620064
327 Ga0207689_10230503
328 Ga0207661_10169293
329 Ga0207667_10100733
330 Ga0207667_10435306
331 Ga0207712_10079046
332 Ga0207708_10019995
333 Ga0207702_10213532
334 Ga0207702_10244415
335 Ga0207641_10091657
336 Ga0207648_10098212
337 Ga0207674_10175563
338 Ga0207674_10637140
339 Ga0207674_10949465
340 Ga0207675_100130839
341 Ga0207698_10540048
342 Ga0268265_10353367
343 Ga0268265_10421786
344 Ga0268264_10969444
345 Ga0265337_1118271
346 Ga0265326_10037499
347 Ga0265334_10006275
348 Ga0265336_10000836
349 Ga0265338_10000008
350 Ga0265338_10000836
351 Ga0265338_10001224
352 Ga0265338_10001643
353 Ga0265338_10004555
354 Ga0265338_10022110
355 Ga0265338_10068445
356 Ga0265338_10171455
357 Ga0265338_10628726
358 Ga0265324_10002960
359 Ga0265324_10008695
360 Ga0265324_10065962
361 Ga0265324_10081693
362 Ga0265324_10132769
363 Ga0265328_10089661
364 Ga0265320_10016284
365 Ga0265320_10183330
366 Ga0265320_10202622
367 Ga0265340_10097856
368 Ga0265340_10269739
369 Ga0265339_10011701
370 Ga0265339_10046152
371 Ga0265339_10050790
372 Ga0265327_10001858
373 Ga0265327_10027993
374 Ga0265316_10094526
375 Ga0265314_10005913
376 Ga0265314_10107791
377 Ga0265314_10168608
378 Ga0265314_10175998
379 Ga0316576_10071683
380 Ga0307405_10124195
381 Ga0307407_10590477
382 Ga0307416_100202523
383 Ga0316593_10017113
384 Ga0316596_1001414
385 Ga0373926_0031808
386 Ga0373953_0173106
387 Ga0373954_0063137
388 Ga0373946_0173429
389 Ga0373931_0719073
390 Ga0373935_0310035
391 Ga0373927_0012159
392 Ga0373927_0029709
393 Ga0373947_0034434
394 Ga0373937_0186652
395 Ga0373925_0039202
396 Ga0373925_0082760
397 Ga0373925_0318924
398 Ga0451577_0035196
399 Ga0451577_0853595
400 Ga0451577_1032654
401 Ga0453684_0013422
402 Ga0466957_0794329
403 Ga0451576_0137732
404 Ga0451576_0274921
405 Ga0451576_0777595
406 Ga0495592_0000315
407 Ga0495592_0043302
408 Ga0495651_0390943
409 Ga0495639_0373753
410 Ga0495662_0015663
411 Ga0495664_0027447
412 Ga0495618_0008156
413 Ga0495628_0000127
414 Ga0495628_0437798
415 Ga0495628_0537774
416 Ga0495628_0714552
417 Ga0495630_0176547
418 Ga0495666_0124568
419 Ga0495652_0057511
420 Ga0495640_0031755
421 Ga0495586_0000930
422 Ga0495645_0009409
423 Ga0495599_0016977
424 Ga0495647_0074113
425 Ga0495658_0272405
426 Ga0495624_0433994
427 Ga0495604_0081893
428 Ga0495674_0014682
429 Ga0495680_0115283
430 Ga0495675_0192660
431 Ga0495684_0594201
432 Ga0495602_0566900
433 Ga0501032_0033815
434 Ga0501033_0048200
435 Ga0501033_0049085
436 Ga0501034_0037164
437 Ga0501034_0173431
438 Ga0501036_0206865
439 Ga0501037_0581064
440 Ga0501043_0020213
441 Ga0501047_0376528
442 Ga0501035_0190467
443 Ga0501044_0015650
444 Ga0501044_0426249
445 nmdc:mga05p37_108551_c1
446 nmdc:mga05p37_1224223_c1
447 nmdc:mga0qj67_462134_c1
448 nmdc:mga08y16_1101890_c1
449 nmdc:mga08x19_593997_c1
450 nmdc:mga0a205_429797_c1
451 Ga0500650_0026661
452 Ga0500595_068760
453 Ga0500636_0089811
454 Ga0590071_047372

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01195

Pept_tRNA_hydro

Peptidyl-tRNA hydrolase

13

202

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7brd-assembly1.cif.gz_A crystal structure of peptidyl-trna hydrolase from klebsiella pneumoniae 0.9584 1 186
4qt4-assembly2.cif.gz_B crystal structure of peptidyl-trna hydrolase from a gram-positive bacterium, streptococcus pyogenes at 2.19 angstrom resolution shows the closed structure of the substrate binding cleft 0.9578 2 187
8axp-assembly1.cif.gz_B neisseria gonorrhoeae peptidyl-trna hydrolase complexed with an xchem hit. 0.9549 2 187
4p7b-assembly2.cif.gz_C crystal structure of s. typhimurium peptidyl-trna hydrolase 0.9534 2 186
7wt6-assembly1.cif.gz_A crystal structure of full-length peptidyl-trna hydrolase from mycobacterium tuberculosis 0.9523 2 187
ID Description Score Start End Superfamily
af_Q54V95_265_452_3.40.50.1470 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidyl-tRNA hydrolase 0.9585 62 187 3.40.50.1470
4q55B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidyl-tRNA hydrolase 0.9576 2 187 3.40.50.1470
af_F1M8A9_28_144_3.40.50.1470 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidyl-tRNA hydrolase 0.949 2 109 3.40.50.1470
af_Q86Y79_27_209_3.40.50.1470 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidyl-tRNA hydrolase 0.9452 2 179 3.40.50.1470
1rynA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Peptidyl-tRNA hydrolase 0.941 2 186 3.40.50.1470
ID Description Score Start End GO Terms
AF-A0A1W9LGN1-F1-model_v4 Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29) 0.9804 1 185 GO:0004045
GO:0005737
GO:0006412
AF-A0A800AR57-F1-model_v4 Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29) 0.9796 1 186 GO:0004045
GO:0005737
GO:0006412
AF-A0A136Q8J1-F1-model_v4 Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29) 0.9792 1 187 GO:0004045
GO:0005737
GO:0006412
AF-A0A6M1YH46-F1-model_v4 Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29) 0.9782 2 183 GO:0004045
GO:0005737
GO:0006412
AF-A0A2Z4FMK8-F1-model_v4 Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29) 0.9772 2 186 GO:0004045
GO:0005737
GO:0006412

Map