F339910
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 227 | 173 | 454 | 315 |
Family's Representative Sequence
| Representative Sequence | 3300013102|Ga0157371_10151065|Ga0157371_101510652 |
| Length | 354 |
| Sequence | LVIQAVKYNNQFSIKSRQLTTARLKPIMIHISRRPRRNRKSSAIRDLVQETTLQVSDFIFPMFVQEGTNQKVEVKSMPGIYRFSLDNLLEELKEVTDLGIRAIDLFPNYPESKKDRIASESYQEDTFYLKAISAVKEKFPELVIMTDAAMDPYSSDGHDGLVENGKILNDATLEILAKMTLAQAKAGADIIGPSDMMDGRVGYIRNNLDVNGFTDVSIMSYSAKYASAFYGPFRDALESAPKFGDKKTYQMNPANKREALLEAQLDFEEGADMLMVKPALSYLDIIRLLDENFDIPIAAYNVSGEYAMVKAAAQNGWLDGDRAMMEVLMSIRRAGAKCILTYFAKEAAVLLNSK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 2 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 3 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 4 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 5 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 6 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 7 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 8 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 9 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 17 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 21 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 30 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 32 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 36 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 37 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 38 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 39 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 40 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 41 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 42 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 43 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 44 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 45 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 46 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 47 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 48 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 49 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 50 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 61 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 62 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 63 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 65 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 83 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 86 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 87 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 88 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 89 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 90 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 91 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 92 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 93 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 94 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 95 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 96 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 97 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 98 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 99 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 100 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 101 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 102 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 103 | 3300041408 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 | Metagenome | Rhizosphere |
| 104 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 105 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 106 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 107 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 108 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 109 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300046526 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300046537 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 123 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 124 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 125 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 126 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 127 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 128 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 129 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 130 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 131 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 132 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 133 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 135 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 136 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 138 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 139 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 140 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 141 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 142 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 143 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 144 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 145 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 146 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 147 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 148 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 149 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 150 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 151 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 152 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 153 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 154 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 155 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 156 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 157 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 158 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 159 | 2522125168 | Dyadobacter beijingensis DSM 21582 | Isolate | Rhizosphere |
| 160 | 2721755487 | Sphingobacterium sp. B29 | Isolate | Rhizosphere |
| 161 | 2738541358 | Bacillus sp. OV752 | Isolate | Unclassified |
| 162 | 2738543006 | Bacillus sp. OK077 | Isolate | Unclassified |
| 163 | 2739367866 | Hymenobacter sp. YR204 | Isolate | Unclassified |
| 164 | 2904780799 | Sphingobacterium sp. 1304 | Isolate | Rhizosphere |
| 165 | 2910245624 | Adhaeribacter radiodurans KUDC8001 | Isolate | Rhizosphere |
| 166 | 2911138879 | Spirosoma sp. KUDC1026 | Isolate | Rhizosphere |
| 167 | 2919177583 | Sphingobacterium sp. 2149 | Isolate | Rhizosphere |
| 168 | 2964375228 | Anaerobacillus alkaliphilus B16-10 | Isolate | Rhizosphere |
| 169 | 3006826541 | Bacillus haikouensis CrR16 | Isolate | Unclassified |
| 170 | 3006858327 | Bacillus paralicheniformis SUBG0010 | Isolate | Unclassified |
| 171 | 3006984091 | Lederbergia citrea FJAT-49754 | Isolate | Rhizosphere |
| 172 | 8007375930 | Clostridium sp. YIM B02565 | Isolate | Unclassified |
| 173 | 8055588893 | Parapedobacter lycopersici KACC 18788 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 92.07 |
| Metatranscriptomes | 1.32 |
| Isolates | 6.61 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.57 |
| Nodule | 0 |
| Rhizoplane | 1.76 |
| Rhizosphere | 80.62 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.88 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0157371_10151065 | 3300013102 | Bacteria | 1656 |
| 2 | Ga0055532_1000038 | 3300003758 | Bacteria | 198387 |
| 3 | Ga0065165_1000097 | 3300005262 | Bacteria | 144227 |
| 4 | Ga0065715_10003226 | 3300005293 | Bacteria | 5017 |
| 5 | Ga0070683_100001587 | 3300005329 | Bacteria | 17593 |
| 6 | Ga0068869_100084893 | 3300005334 | Bacteria | 2371 |
| 7 | Ga0068868_100042877 | 3300005338 | Bacteria | 3534 |
| 8 | Ga0070689_100002727 | 3300005340 | Bacteria | 11579 |
| 9 | Ga0070675_100036191 | 3300005354 | Bacteria | 4014 |
| 10 | Ga0070675_100045679 | 3300005354 | Bacteria | 3584 |
| 11 | Ga0070671_100367335 | 3300005355 | Bacteria | 1229 |
| 12 | Ga0070674_100027054 | 3300005356 | Bacteria | 3755 |
| 13 | Ga0070673_100112744 | 3300005364 | Bacteria | 2258 |
| 14 | Ga0070667_100060884 | 3300005367 | Bacteria | 3195 |
| 15 | Ga0070709_10006640 | 3300005434 | Bacteria | 6315 |
| 16 | Ga0070714_100029385 | 3300005435 | Bacteria | 4570 |
| 17 | Ga0070714_100143242 | 3300005435 | Bacteria | 2148 |
| 18 | Ga0070714_100307567 | 3300005435 | Bacteria | 1479 |
| 19 | Ga0070713_100049719 | 3300005436 | Bacteria | 3460 |
| 20 | Ga0070701_10026132 | 3300005438 | Bacteria | 2843 |
| 21 | Ga0070700_100015432 | 3300005441 | Bacteria | 4331 |
| 22 | Ga0070700_100101880 | 3300005441 | Bacteria | 1893 |
| 23 | Ga0070681_10149182 | 3300005458 | Bacteria | 2266 |
| 24 | Ga0068867_100050302 | 3300005459 | Bacteria | 3071 |
| 25 | Ga0070685_10032296 | 3300005466 | Bacteria | 2932 |
| 26 | Ga0070706_100064438 | 3300005467 | Bacteria | 3387 |
| 27 | Ga0070707_100014909 | 3300005468 | Bacteria | 7291 |
| 28 | Ga0070684_100061550 | 3300005535 | Bacteria | 3285 |
| 29 | Ga0070697_100011043 | 3300005536 | Bacteria | 7057 |
| 30 | Ga0070672_100031636 | 3300005543 | Bacteria | 3985 |
| 31 | Ga0070696_100079402 | 3300005546 | Bacteria | 2322 |
| 32 | Ga0070704_100027956 | 3300005549 | Bacteria | 3746 |
| 33 | Ga0068855_100161597 | 3300005563 | Bacteria | 2541 |
| 34 | Ga0070702_100119765 | 3300005615 | Bacteria | 1646 |
| 35 | Ga0068861_100024605 | 3300005719 | Bacteria | 4356 |
| 36 | Ga0068863_100020282 | 3300005841 | Bacteria | 6358 |
| 37 | Ga0068858_100176245 | 3300005842 | Bacteria | 2017 |
| 38 | Ga0068860_100038325 | 3300005843 | Bacteria | 4584 |
| 39 | Ga0081539_10000397 | 3300005985 | Bacteria | 93458 |
| 40 | Ga0075365_10010869 | 3300006038 | Bacteria | 5327 |
| 41 | Ga0075368_10017020 | 3300006042 | Bacteria | 2716 |
| 42 | Ga0075363_100057436 | 3300006048 | Bacteria | 2088 |
| 43 | Ga0075364_10145018 | 3300006051 | Bacteria | 1598 |
| 44 | Ga0075362_10002367 | 3300006177 | Bacteria | 6310 |
| 45 | Ga0075367_10050662 | 3300006178 | Bacteria | 2452 |
| 46 | Ga0075367_10073536 | 3300006178 | Bacteria | 2059 |
| 47 | Ga0075366_10022418 | 3300006195 | Bacteria | 3674 |
| 48 | Ga0075370_10021531 | 3300006353 | Bacteria | 3532 |
| 49 | Ga0075370_10149886 | 3300006353 | Bacteria | 1367 |
| 50 | Ga0068871_100125196 | 3300006358 | Bacteria | 2175 |
| 51 | Ga0075428_100039254 | 3300006844 | Bacteria | 5210 |
| 52 | Ga0075428_100098304 | 3300006844 | Bacteria | 3191 |
| 53 | Ga0075430_100329929 | 3300006846 | Bacteria | 1261 |
| 54 | Ga0075431_100132570 | 3300006847 | Bacteria | 2570 |
| 55 | Ga0075429_100040077 | 3300006880 | Bacteria | 4077 |
| 56 | Ga0068865_100082994 | 3300006881 | Bacteria | 2305 |
| 57 | Ga0105251_10011350 | 3300009011 | Bacteria | 5093 |
| 58 | Ga0111539_10000070 | 3300009094 | Bacteria | 103017 |
| 59 | Ga0111539_10034591 | 3300009094 | Bacteria | 6124 |
| 60 | Ga0105245_10039974 | 3300009098 | Bacteria | 4176 |
| 61 | Ga0114129_10240670 | 3300009147 | Bacteria | 2433 |
| 62 | Ga0114129_10299545 | 3300009147 | Bacteria | 2144 |
| 63 | Ga0105243_10000009 | 3300009148 | Bacteria | 354419 |
| 64 | Ga0105243_10098840 | 3300009148 | Bacteria | 2418 |
| 65 | Ga0105242_10072607 | 3300009176 | Bacteria | 2858 |
| 66 | Ga0157371_10066618 | 3300013102 | Bacteria | 2550 |
| 67 | Ga0157370_10023890 | 3300013104 | Bacteria | 6061 |
| 68 | Ga0157370_10059941 | 3300013104 | Bacteria | 3615 |
| 69 | Ga0157370_10287672 | 3300013104 | Bacteria | 1518 |
| 70 | Ga0157369_10011499 | 3300013105 | Bacteria | 10052 |
| 71 | Ga0157375_10129821 | 3300013308 | Bacteria | 2638 |
| 72 | Ga0157380_10010275 | 3300014326 | Bacteria | 6728 |
| 73 | Ga0157380_10023008 | 3300014326 | Bacteria | 4700 |
| 74 | Ga0197907_10095412 | 3300020069 | Bacteria | 1334 |
| 75 | Ga0206354_10709584 | 3300020081 | Bacteria | 3323 |
| 76 | Ga0206353_11885056 | 3300020082 | Bacteria | 1583 |
| 77 | Ga0209147_100081 | 3300025229 | Bacteria | 195314 |
| 78 | Ga0209455_1014686 | 3300025272 | Bacteria | 1760 |
| 79 | Ga0209676_1000191 | 3300025292 | Bacteria | 139979 |
| 80 | Ga0207643_10008834 | 3300025908 | Bacteria | 5408 |
| 81 | Ga0207657_10377822 | 3300025919 | Bacteria | 1116 |
| 82 | Ga0207646_10012376 | 3300025922 | Bacteria | 8204 |
| 83 | Ga0207646_10070753 | 3300025922 | Bacteria | 3116 |
| 84 | Ga0207681_10208856 | 3300025923 | Bacteria | 1504 |
| 85 | Ga0207659_10184052 | 3300025926 | Bacteria | 1657 |
| 86 | Ga0207664_10069598 | 3300025929 | Bacteria | 2830 |
| 87 | Ga0207706_10014829 | 3300025933 | Bacteria | 7055 |
| 88 | Ga0207709_10000026 | 3300025935 | Bacteria | 354467 |
| 89 | Ga0207670_10328414 | 3300025936 | Bacteria | 1205 |
| 90 | Ga0207667_10616135 | 3300025949 | Bacteria | 1093 |
| 91 | Ga0207658_10504747 | 3300025986 | Bacteria | 1078 |
| 92 | Ga0207678_10007359 | 3300026067 | Bacteria | 9746 |
| 93 | Ga0207708_10003941 | 3300026075 | Bacteria | 10926 |
| 94 | Ga0207702_10121216 | 3300026078 | Bacteria | 2341 |
| 95 | Ga0207648_10009858 | 3300026089 | Bacteria | 9109 |
| 96 | Ga0207683_10271754 | 3300026121 | Bacteria | 1548 |
| 97 | Ga0207428_10000093 | 3300027907 | Bacteria | 123740 |
| 98 | Ga0207428_10306199 | 3300027907 | Bacteria | 1175 |
| 99 | Ga0268265_10402376 | 3300028380 | Bacteria | 1266 |
| 100 | Ga0268264_10163376 | 3300028381 | Bacteria | 2008 |
| 101 | Ga0265338_10207910 | 3300028800 | Bacteria | 1471 |
| 102 | Ga0265340_10049925 | 3300031247 | Bacteria | 2031 |
| 103 | Ga0265327_10000743 | 3300031251 | Bacteria | 50644 |
| 104 | Ga0265327_10006047 | 3300031251 | Bacteria | 9820 |
| 105 | Ga0265314_10050116 | 3300031711 | Bacteria | 2919 |
| 106 | Ga0316576_10002744 | 3300031727 | Bacteria | 10093 |
| 107 | Ga0316576_10020822 | 3300031727 | Bacteria | 4524 |
| 108 | Ga0316576_10054939 | 3300031727 | Bacteria | 2905 |
| 109 | Ga0316576_10068631 | 3300031727 | Bacteria | 2613 |
| 110 | Ga0316578_10002301 | 3300031728 | Bacteria | 8303 |
| 111 | Ga0316578_10074610 | 3300031728 | Bacteria | 2011 |
| 112 | Ga0307405_10063847 | 3300031731 | Bacteria | 2337 |
| 113 | Ga0316577_10005619 | 3300031733 | Bacteria | 6583 |
| 114 | Ga0316577_10098489 | 3300031733 | Bacteria | 1638 |
| 115 | Ga0307414_10048291 | 3300032004 | Bacteria | 2935 |
| 116 | Ga0316574_0132006 | 3300035398 | Bacteria | 1607 |
| 117 | Ga0316584_0148624 | 3300036712 | Bacteria | 1745 |
| 118 | Ga0316584_0155252 | 3300036712 | Bacteria | 1702 |
| 119 | Ga0316584_0170409 | 3300036712 | Bacteria | 1615 |
| 120 | Ga0395899_0220759 | 3300037312 | Bacteria | 1313 |
| 121 | Ga0395900_0104896 | 3300037418 | Bacteria | 2904 |
| 122 | Ga0395900_0466252 | 3300037418 | Bacteria | 1217 |
| 123 | Ga0395898_0527738 | 3300037466 | Bacteria | 1122 |
| 124 | Ga0395905_0000001 | 3300037471 | Bacteria | 2037079 |
| 125 | Ga0395905_0040647 | 3300037471 | Bacteria | 4363 |
| 126 | Ga0436364_0542540 | 3300037853 | Bacteria | 1020 |
| 127 | Ga0395901_0000797 | 3300038443 | Bacteria | 35092 |
| 128 | Ga0395901_0185462 | 3300038443 | Bacteria | 2182 |
| 129 | Ga0400487_22763 | 3300039110 | Bacteria | 1609 |
| 130 | Ga0439453_0007036 | 3300041408 | Bacteria | 1771 |
| 131 | Ga0451577_0000078 | 3300042876 | Bacteria | 219860 |
| 132 | Ga0451577_0007137 | 3300042876 | Bacteria | 11018 |
| 133 | Ga0451577_0171863 | 3300042876 | Bacteria | 1953 |
| 134 | Ga0453683_0002904 | 3300044673 | Bacteria | 12955 |
| 135 | Ga0453683_0009450 | 3300044673 | Bacteria | 6506 |
| 136 | Ga0453683_0014655 | 3300044673 | Bacteria | 5087 |
| 137 | Ga0453684_0000120 | 3300044712 | Bacteria | 345098 |
| 138 | Ga0453684_0000243 | 3300044712 | Bacteria | 233640 |
| 139 | Ga0453684_0000368 | 3300044712 | Bacteria | 185018 |
| 140 | Ga0453684_0001376 | 3300044712 | Bacteria | 70460 |
| 141 | Ga0453684_0004893 | 3300044712 | Bacteria | 27417 |
| 142 | Ga0453684_0291157 | 3300044712 | Bacteria | 1859 |
| 143 | Ga0453684_0418901 | 3300044712 | Bacteria | 1496 |
| 144 | Ga0453684_0646545 | 3300044712 | Bacteria | 1154 |
| 145 | Ga0451576_0000623 | 3300045051 | Bacteria | 73938 |
| 146 | Ga0451576_0000908 | 3300045051 | Bacteria | 56053 |
| 147 | Ga0451576_0003543 | 3300045051 | Bacteria | 21277 |
| 148 | Ga0451576_0025151 | 3300045051 | Bacteria | 6418 |
| 149 | Ga0451576_0046102 | 3300045051 | Bacteria | 4591 |
| 150 | Ga0451576_0054098 | 3300045051 | Bacteria | 4203 |
| 151 | Ga0451576_0180034 | 3300045051 | Bacteria | 2207 |
| 152 | Ga0466967_0027663 | 3300045976 | Bacteria | 4720 |
| 153 | Ga0466967_0203568 | 3300045976 | Bacteria | 1875 |
| 154 | Ga0495638_0027190 | 3300046460 | Bacteria | 3704 |
| 155 | Ga0495580_0035346 | 3300046472 | Bacteria | 3594 |
| 156 | Ga0495582_0040013 | 3300046473 | Bacteria | 2581 |
| 157 | Ga0495664_0000051 | 3300046477 | Bacteria | 59070 |
| 158 | Ga0495664_0093232 | 3300046477 | Bacteria | 1812 |
| 159 | Ga0495585_0157615 | 3300046492 | Bacteria | 1180 |
| 160 | Ga0495594_0015513 | 3300046499 | Bacteria | 4003 |
| 161 | Ga0495666_0060038 | 3300046526 | Bacteria | 1818 |
| 162 | Ga0495598_0002746 | 3300046537 | Bacteria | 3655 |
| 163 | Ga0495622_0106709 | 3300046557 | Unclassified | 1283 |
| 164 | Ga0495656_0000005 | 3300046615 | Bacteria | 238208 |
| 165 | Ga0495656_0197404 | 3300046615 | Bacteria | 997 |
| 166 | Ga0495659_0000419 | 3300046664 | Bacteria | 16169 |
| 167 | Ga0495669_0019193 | 3300046684 | Bacteria | 2949 |
| 168 | Ga0495636_0021273 | 3300047318 | Unclassified | 2619 |
| 169 | Ga0496103_0393532 | 3300048906 | Bacteria | 890 |
| 170 | Ga0496105_0219018 | 3300048908 | Bacteria | 1550 |
| 171 | Ga0496113_0190741 | 3300048916 | Bacteria | 1627 |
| 172 | Ga0496115_0364271 | 3300048918 | Bacteria | 1177 |
| 173 | Ga0496116_0022816 | 3300048919 | Bacteria | 4677 |
| 174 | Ga0496117_0011076 | 3300048920 | Bacteria | 8114 |
| 175 | Ga0496118_0073536 | 3300048921 | Bacteria | 2448 |
| 176 | Ga0496121_0156645 | 3300048924 | Bacteria | 1671 |
| 177 | Ga0496122_0000019 | 3300048925 | Bacteria | 411199 |
| 178 | Ga0496123_0026335 | 3300048926 | Bacteria | 4358 |
| 179 | Ga0496126_0001172 | 3300048929 | Bacteria | 43141 |
| 180 | Ga0496126_0115416 | 3300048929 | Bacteria | 2335 |
| 181 | Ga0501031_0007910 | 3300049568 | Bacteria | 6920 |
| 182 | Ga0501040_0002692 | 3300049576 | Bacteria | 11458 |
| 183 | Ga0501043_0000725 | 3300049579 | Bacteria | 29210 |
| 184 | Ga0501071_0005907 | 3300049587 | Bacteria | 7918 |
| 185 | Ga0501072_0195553 | 3300049588 | Bacteria | 1613 |
| 186 | Ga0501076_0017078 | 3300049592 | Bacteria | 5511 |
| 187 | Ga0501076_0031160 | 3300049592 | Bacteria | 4158 |
| 188 | Ga0501076_0193647 | 3300049592 | Bacteria | 1659 |
| 189 | Ga0501222_006707 | 3300049662 | Bacteria | 1544 |
| 190 | Ga0501257_000951 | 3300049686 | Bacteria | 5850 |
| 191 | Ga0501225_0011523 | 3300049705 | Bacteria | 2486 |
| 192 | Ga0501079_0014740 | 3300049741 | Bacteria | 5958 |
| 193 | Ga0501081_0032389 | 3300049743 | Bacteria | 3546 |
| 194 | Ga0501045_0004417 | 3300049824 | Bacteria | 9706 |
| 195 | nmdc:mga03683_6149_c1 | 3300050489 | Bacteria | 4099 |
| 196 | nmdc:mga03n38_23463_c1 | 3300050490 | Bacteria | 2510 |
| 197 | nmdc:mga00v17_153152_c1 | 3300050491 | Bacteria | 1482 |
| 198 | nmdc:mga0yw44_150693_c1 | 3300050492 | Bacteria | 1517 |
| 199 | nmdc:mga0k408_365_c1 | 3300050493 | Bacteria | 24745 |
| 200 | nmdc:mga06z11_5045_c1 | 3300050494 | Bacteria | 5255 |
| 201 | nmdc:mga04h51_21486_c1 | 3300050495 | Bacteria | 1942 |
| 202 | nmdc:mga07m45_51682_c1 | 3300050496 | Bacteria | 2318 |
| 203 | nmdc:mga05p37_250984_c1 | 3300050507 | Bacteria | 2122 |
| 204 | nmdc:mga05p37_511601_c1 | 3300050507 | Bacteria | 1375 |
| 205 | nmdc:mga09592_42353_c1 | 3300050508 | Bacteria | 3829 |
| 206 | nmdc:mga06r32_120249_c1 | 3300050510 | Bacteria | 2590 |
| 207 | nmdc:mga08y16_25261_c1 | 3300050511 | Bacteria | 6263 |
| 208 | nmdc:mga08y16_3873_c1 | 3300050511 | Bacteria | 15569 |
| 209 | Ga0500573_0108476 | 3300053140 | Bacteria | 1556 |
| 210 | Ga0501082_0071216 | 3300060353 | Bacteria | 2994 |
| 211 | Ga0501082_0095889 | 3300060353 | Bacteria | 2564 |
| 212 | Ga0501082_0377163 | 3300060353 | Bacteria | 1237 |
| 213 | 2522552399 | 2522125168 | Bacteria | 7376607 |
| 214 | 2722726249 | 2721755487 | Bacteria | 6357185 |
| 215 | 2739157771 | 2738541358 | Bacteria | 5932299 |
| 216 | 2739209862 | 2738543006 | Bacteria | 5904091 |
| 217 | 2740031857 | 2739367866 | Bacteria | 4215900 |
| 218 | 2904782852 | 2904780799 | Bacteria | 5840761 |
| 219 | 2910246081 | 2910245624 | Bacteria | 6935613 |
| 220 | 2911139764 | 2911138879 | Bacteria | 5811561 |
| 221 | 2919180463 | 2919177583 | Bacteria | 5641607 |
| 222 | 2964379235 | 2964375228 | Bacteria | 4909004 |
| 223 | 3006829458 | 3006826541 | Bacteria | 4678913 |
| 224 | 3006861312 | 3006858327 | Bacteria | 4317835 |
| 225 | 3006984385 | 3006984091 | Bacteria | 4207523 |
| 226 | 8007379158 | 8007375930 | Bacteria | 4080554 |
| 227 | 8055591251 | 8055588893 | Bacteria | 3619545 |
| 228 | Ga0157371_10151065 | |||
| 229 | Ga0055532_1000038 | |||
| 230 | Ga0065165_1000097 | |||
| 231 | Ga0065715_10003226 | |||
| 232 | Ga0070683_100001587 | |||
| 233 | Ga0068869_100084893 | |||
| 234 | Ga0068868_100042877 | |||
| 235 | Ga0070689_100002727 | |||
| 236 | Ga0070675_100036191 | |||
| 237 | Ga0070675_100045679 | |||
| 238 | Ga0070671_100367335 | |||
| 239 | Ga0070674_100027054 | |||
| 240 | Ga0070673_100112744 | |||
| 241 | Ga0070667_100060884 | |||
| 242 | Ga0070709_10006640 | |||
| 243 | Ga0070714_100029385 | |||
| 244 | Ga0070714_100143242 | |||
| 245 | Ga0070714_100307567 | |||
| 246 | Ga0070713_100049719 | |||
| 247 | Ga0070701_10026132 | |||
| 248 | Ga0070700_100015432 | |||
| 249 | Ga0070700_100101880 | |||
| 250 | Ga0070681_10149182 | |||
| 251 | Ga0068867_100050302 | |||
| 252 | Ga0070685_10032296 | |||
| 253 | Ga0070706_100064438 | |||
| 254 | Ga0070707_100014909 | |||
| 255 | Ga0070684_100061550 | |||
| 256 | Ga0070697_100011043 | |||
| 257 | Ga0070672_100031636 | |||
| 258 | Ga0070696_100079402 | |||
| 259 | Ga0070704_100027956 | |||
| 260 | Ga0068855_100161597 | |||
| 261 | Ga0070702_100119765 | |||
| 262 | Ga0068861_100024605 | |||
| 263 | Ga0068863_100020282 | |||
| 264 | Ga0068858_100176245 | |||
| 265 | Ga0068860_100038325 | |||
| 266 | Ga0081539_10000397 | |||
| 267 | Ga0075365_10010869 | |||
| 268 | Ga0075368_10017020 | |||
| 269 | Ga0075363_100057436 | |||
| 270 | Ga0075364_10145018 | |||
| 271 | Ga0075362_10002367 | |||
| 272 | Ga0075367_10050662 | |||
| 273 | Ga0075367_10073536 | |||
| 274 | Ga0075366_10022418 | |||
| 275 | Ga0075370_10021531 | |||
| 276 | Ga0075370_10149886 | |||
| 277 | Ga0068871_100125196 | |||
| 278 | Ga0075428_100039254 | |||
| 279 | Ga0075428_100098304 | |||
| 280 | Ga0075430_100329929 | |||
| 281 | Ga0075431_100132570 | |||
| 282 | Ga0075429_100040077 | |||
| 283 | Ga0068865_100082994 | |||
| 284 | Ga0105251_10011350 | |||
| 285 | Ga0111539_10000070 | |||
| 286 | Ga0111539_10034591 | |||
| 287 | Ga0105245_10039974 | |||
| 288 | Ga0114129_10240670 | |||
| 289 | Ga0114129_10299545 | |||
| 290 | Ga0105243_10000009 | |||
| 291 | Ga0105243_10098840 | |||
| 292 | Ga0105242_10072607 | |||
| 293 | Ga0157371_10066618 | |||
| 294 | Ga0157370_10023890 | |||
| 295 | Ga0157370_10059941 | |||
| 296 | Ga0157370_10287672 | |||
| 297 | Ga0157369_10011499 | |||
| 298 | Ga0157375_10129821 | |||
| 299 | Ga0157380_10010275 | |||
| 300 | Ga0157380_10023008 | |||
| 301 | Ga0197907_10095412 | |||
| 302 | Ga0206354_10709584 | |||
| 303 | Ga0206353_11885056 | |||
| 304 | Ga0209147_100081 | |||
| 305 | Ga0209455_1014686 | |||
| 306 | Ga0209676_1000191 | |||
| 307 | Ga0207643_10008834 | |||
| 308 | Ga0207657_10377822 | |||
| 309 | Ga0207646_10012376 | |||
| 310 | Ga0207646_10070753 | |||
| 311 | Ga0207681_10208856 | |||
| 312 | Ga0207659_10184052 | |||
| 313 | Ga0207664_10069598 | |||
| 314 | Ga0207706_10014829 | |||
| 315 | Ga0207709_10000026 | |||
| 316 | Ga0207670_10328414 | |||
| 317 | Ga0207667_10616135 | |||
| 318 | Ga0207658_10504747 | |||
| 319 | Ga0207678_10007359 | |||
| 320 | Ga0207708_10003941 | |||
| 321 | Ga0207702_10121216 | |||
| 322 | Ga0207648_10009858 | |||
| 323 | Ga0207683_10271754 | |||
| 324 | Ga0207428_10000093 | |||
| 325 | Ga0207428_10306199 | |||
| 326 | Ga0268265_10402376 | |||
| 327 | Ga0268264_10163376 | |||
| 328 | Ga0265338_10207910 | |||
| 329 | Ga0265340_10049925 | |||
| 330 | Ga0265327_10000743 | |||
| 331 | Ga0265327_10006047 | |||
| 332 | Ga0265314_10050116 | |||
| 333 | Ga0316576_10002744 | |||
| 334 | Ga0316576_10020822 | |||
| 335 | Ga0316576_10054939 | |||
| 336 | Ga0316576_10068631 | |||
| 337 | Ga0316578_10002301 | |||
| 338 | Ga0316578_10074610 | |||
| 339 | Ga0307405_10063847 | |||
| 340 | Ga0316577_10005619 | |||
| 341 | Ga0316577_10098489 | |||
| 342 | Ga0307414_10048291 | |||
| 343 | Ga0316574_0132006 | |||
| 344 | Ga0316584_0148624 | |||
| 345 | Ga0316584_0155252 | |||
| 346 | Ga0316584_0170409 | |||
| 347 | Ga0395899_0220759 | |||
| 348 | Ga0395900_0104896 | |||
| 349 | Ga0395900_0466252 | |||
| 350 | Ga0395898_0527738 | |||
| 351 | Ga0395905_0000001 | |||
| 352 | Ga0395905_0040647 | |||
| 353 | Ga0436364_0542540 | |||
| 354 | Ga0395901_0000797 | |||
| 355 | Ga0395901_0185462 | |||
| 356 | Ga0400487_22763 | |||
| 357 | Ga0439453_0007036 | |||
| 358 | Ga0451577_0000078 | |||
| 359 | Ga0451577_0007137 | |||
| 360 | Ga0451577_0171863 | |||
| 361 | Ga0453683_0002904 | |||
| 362 | Ga0453683_0009450 | |||
| 363 | Ga0453683_0014655 | |||
| 364 | Ga0453684_0000120 | |||
| 365 | Ga0453684_0000243 | |||
| 366 | Ga0453684_0000368 | |||
| 367 | Ga0453684_0001376 | |||
| 368 | Ga0453684_0004893 | |||
| 369 | Ga0453684_0291157 | |||
| 370 | Ga0453684_0418901 | |||
| 371 | Ga0453684_0646545 | |||
| 372 | Ga0451576_0000623 | |||
| 373 | Ga0451576_0000908 | |||
| 374 | Ga0451576_0003543 | |||
| 375 | Ga0451576_0025151 | |||
| 376 | Ga0451576_0046102 | |||
| 377 | Ga0451576_0054098 | |||
| 378 | Ga0451576_0180034 | |||
| 379 | Ga0466967_0027663 | |||
| 380 | Ga0466967_0203568 | |||
| 381 | Ga0495638_0027190 | |||
| 382 | Ga0495580_0035346 | |||
| 383 | Ga0495582_0040013 | |||
| 384 | Ga0495664_0000051 | |||
| 385 | Ga0495664_0093232 | |||
| 386 | Ga0495585_0157615 | |||
| 387 | Ga0495594_0015513 | |||
| 388 | Ga0495666_0060038 | |||
| 389 | Ga0495598_0002746 | |||
| 390 | Ga0495622_0106709 | |||
| 391 | Ga0495656_0000005 | |||
| 392 | Ga0495656_0197404 | |||
| 393 | Ga0495659_0000419 | |||
| 394 | Ga0495669_0019193 | |||
| 395 | Ga0495636_0021273 | |||
| 396 | Ga0496103_0393532 | |||
| 397 | Ga0496105_0219018 | |||
| 398 | Ga0496113_0190741 | |||
| 399 | Ga0496115_0364271 | |||
| 400 | Ga0496116_0022816 | |||
| 401 | Ga0496117_0011076 | |||
| 402 | Ga0496118_0073536 | |||
| 403 | Ga0496121_0156645 | |||
| 404 | Ga0496122_0000019 | |||
| 405 | Ga0496123_0026335 | |||
| 406 | Ga0496126_0001172 | |||
| 407 | Ga0496126_0115416 | |||
| 408 | Ga0501031_0007910 | |||
| 409 | Ga0501040_0002692 | |||
| 410 | Ga0501043_0000725 | |||
| 411 | Ga0501071_0005907 | |||
| 412 | Ga0501072_0195553 | |||
| 413 | Ga0501076_0017078 | |||
| 414 | Ga0501076_0031160 | |||
| 415 | Ga0501076_0193647 | |||
| 416 | Ga0501222_006707 | |||
| 417 | Ga0501257_000951 | |||
| 418 | Ga0501225_0011523 | |||
| 419 | Ga0501079_0014740 | |||
| 420 | Ga0501081_0032389 | |||
| 421 | Ga0501045_0004417 | |||
| 422 | nmdc:mga03683_6149_c1 | |||
| 423 | nmdc:mga03n38_23463_c1 | |||
| 424 | nmdc:mga00v17_153152_c1 | |||
| 425 | nmdc:mga0yw44_150693_c1 | |||
| 426 | nmdc:mga0k408_365_c1 | |||
| 427 | nmdc:mga06z11_5045_c1 | |||
| 428 | nmdc:mga04h51_21486_c1 | |||
| 429 | nmdc:mga07m45_51682_c1 | |||
| 430 | nmdc:mga05p37_250984_c1 | |||
| 431 | nmdc:mga05p37_511601_c1 | |||
| 432 | nmdc:mga09592_42353_c1 | |||
| 433 | nmdc:mga06r32_120249_c1 | |||
| 434 | nmdc:mga08y16_25261_c1 | |||
| 435 | nmdc:mga08y16_3873_c1 | |||
| 436 | Ga0500573_0108476 | |||
| 437 | Ga0501082_0071216 | |||
| 438 | Ga0501082_0095889 | |||
| 439 | Ga0501082_0377163 | |||
| 440 | 2522552399 | |||
| 441 | 2722726249 | |||
| 442 | 2739157771 | |||
| 443 | 2739209862 | |||
| 444 | 2740031857 | |||
| 445 | 2904782852 | |||
| 446 | 2910246081 | |||
| 447 | 2911139764 | |||
| 448 | 2919180463 | |||
| 449 | 2964379235 | |||
| 450 | 3006829458 | |||
| 451 | 3006861312 | |||
| 452 | 3006984385 | |||
| 453 | 8007379158 | |||
| 454 | 8055591251 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2c1h-assembly1.cif.gz_A | the x-ray structure of chlorobium vibrioforme 5-aminolaevulinic acid dehydratase complexed with a diacid inhibitor | 0.9895 | 6 | 322 |
| 3obk-assembly1.cif.gz_H | crystal structure of delta-aminolevulinic acid dehydratase (porphobilinogen synthase) from toxoplasma gondii me49 in complex with the reaction product porphobilinogen | 0.984 | 6 | 327 |
| 2c1h-assembly1.cif.gz_A | the x-ray structure of chlorobium vibrioforme 5-aminolaevulinic acid dehydratase complexed with a diacid inhibitor | 0.9803 | 6 | 322 |
| 1w56-assembly1.cif.gz_A | stepwise introduction of zinc binding site into porphobilinogen synthase of pseudomonas aeruginosa (mutations a129c and d131c) | 0.9793 | 4 | 324 |
| 1b4e-assembly1.cif.gz_A | x-ray structure of 5-aminolevulinic acid dehydratase complexed with the inhibitor levulinic acid | 0.9779 | 7 | 324 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q60178_5_334_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9841 | 2 | 322 | 3.20.20.70 |
| 1i8jA00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9778 | 6 | 324 | 3.20.20.70 |
| 2c19A00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9747 | 4 | 321 | 3.20.20.70 |
| af_P9WMP5_2_329_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9691 | 1 | 322 | 3.20.20.70 |
| af_I1KAC1_73_398_3.20.20.70 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9682 | 7 | 327 | 3.20.20.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A354BNY5-F1-model_v4 | Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) (Porphobilinogen synthase) | 0.9984 | 95 | 177 |
GO:0004655
GO:0005829 GO:0006782 GO:0008270 |
| AF-T0Z7S0-F1-model_v4 | porphobilinogen synthase (EC 4.2.1.24) (Porphobilinogen synthase) | 0.9979 | 223 | 316 |
GO:0004655
GO:0005829 GO:0006782 GO:0008270 |
| AF-A0A356UGF9-F1-model_v4 | Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) | 0.9955 | 36 | 324 |
GO:0004655
GO:0005829 GO:0006782 GO:0008270 |
| AF-A0A3C1TBA4-F1-model_v4 | Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) | 0.9953 | 238 | 323 |
GO:0004655
GO:0005829 GO:0006782 GO:0008270 |
| AF-A0A535MK06-F1-model_v4 | Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) | 0.9951 | 233 | 320 |
GO:0004655
GO:0005829 GO:0006782 GO:0008270 |