F339655

General Info

Members Datasets Scaffolds Average Seq Length
227 146 454 709

Family's Representative Sequence

Representative Sequence 3300005438|Ga0070701_10012968|Ga0070701_100129684
Length 769
Sequence MLRSSLRTSWRTPLLSIALTAGALGAQTNSPPLTYPAAPRGSQVDLYHGTNVADPYRWLEDVDAPATTQWVAAQNRLTDSFLAQIPERTAIKDKLTNLWNYSRYSAPTKEGGRYFYFQNTGLQNQAVLYVQNGHDAPRVLLDPNLLSSDGTVALSQTAPSYDGHLLAYSISTSGSDWQELHVRNVDTGRDMPDVMKWVKFSGIAWTHDNKGFFYSRYDEPTSGNKMTNANKFHKVYYHRVGQQQSRDELVFDRPDQPDWLFDATVTDDGQYLIITVAQGTDVRTRLYFIDLDNPGKPQIDNPVVRLIDKLDAEYSFIGNRATTFYVRTDKNAPRGRIVAINIDNAREERWNTIVPENKDALVMATMAGEDIVANYLQDAHSSVRFFTASRDLRPDTRPRPGQPQQQQPPRTPGNVYDDTSTAPIVSRGERPQAIGGGYSERGELSLPGIGSVDVIHGRQGEEEMFYTFTSFLYPTTVYRYNLKSRHSEVFRAPKVAFDASAYETRQVFYNSKDGTRVPMFITAKKGIQLDGSNPTLLYAYGGFNISMTPGFSPANIAWLEMGGIYAVPNIRGGGEYGKAWHEGGMLANKQNVFDDFIAAAQYLIQQKYTSTPKLAIRGGSNGGLLIGAVLNQRPDLFGAALPEVGVMDMLRFQKFTIGWAWTSDYGSSDKPDQFKYLLAYSPLQNIKPGTCYPPTLAFTADHDDRVVPGHTFKYVATLQSAQKCPNPILVRIETKSGHGAGRPTTKLIDEAADRFAFLVRELHMRPTLQ

Samples

Sample ID Description Type Environment
1 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
84 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
85 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
101 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
102 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
103 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
106 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
109 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
113 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
114 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
115 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
116 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
117 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
123 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
126 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
131 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
132 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
142 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
146 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0.44
Isolates 0.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.88
Nodule 0
Rhizoplane 0.44
Rhizosphere 97.8
Stem 0
Stem Tuber 0
Unclassified 0.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070701_10012968 3300005438 Bacteria 3778
2 JGI25404J52841_10002460 3300003659 Bacteria 3507
3 Ga0065715_10089531 3300005293 Bacteria 9648
4 Ga0065715_10108521 3300005293 Bacteria 2714
5 Ga0070683_100000052 3300005329 Bacteria 90261
6 Ga0070683_100041547 3300005329 Bacteria 4231
7 Ga0070680_100003980 3300005336 Bacteria 11058
8 Ga0070680_100043702 3300005336 Bacteria 3639
9 Ga0070661_100008098 3300005344 Bacteria 7251
10 Ga0070661_100030823 3300005344 Bacteria 3876
11 Ga0070692_10015719 3300005345 Bacteria 3586
12 Ga0070671_100014271 3300005355 Bacteria 6415
13 Ga0070674_100016459 3300005356 Bacteria 4635
14 Ga0070703_10000214 3300005406 Bacteria 27770
15 Ga0070714_100040986 3300005435 Bacteria 3905
16 Ga0070713_100116458 3300005436 Bacteria 2337
17 Ga0070701_10000378 3300005438 Bacteria 14956
18 Ga0070700_100018172 3300005441 Bacteria 4038
19 Ga0070694_100010335 3300005444 Bacteria 5754
20 Ga0070694_100017596 3300005444 Bacteria 4519
21 Ga0070694_100037193 3300005444 Bacteria 3228
22 Ga0070708_100000016 3300005445 Bacteria 124870
23 Ga0070708_100000343 3300005445 Bacteria 35108
24 Ga0070708_100050597 3300005445 Bacteria 3680
25 Ga0070678_100006819 3300005456 Bacteria 6732
26 Ga0070681_10007806 3300005458 Bacteria 10465
27 Ga0070681_10025365 3300005458 Bacteria 5963
28 Ga0070681_10058773 3300005458 Bacteria 3825
29 Ga0070706_100024580 3300005467 Bacteria 5546
30 Ga0070707_100000867 3300005468 Bacteria 30050
31 Ga0070698_100018276 3300005471 Bacteria 7381
32 Ga0070698_100026453 3300005471 Bacteria 6039
33 Ga0070699_100000005 3300005518 Bacteria 384287
34 Ga0070699_100004761 3300005518 Bacteria 11998
35 Ga0070699_100028829 3300005518 Bacteria 4786
36 Ga0070699_100083486 3300005518 Bacteria 2786
37 Ga0070699_100096421 3300005518 Bacteria 2590
38 Ga0070679_100001158 3300005530 Bacteria 23071
39 Ga0070679_100001512 3300005530 Bacteria 20689
40 Ga0070679_100014859 3300005530 Bacteria 7479
41 Ga0070684_100000073 3300005535 Bacteria 64549
42 Ga0070684_100000156 3300005535 Bacteria 46517
43 Ga0070697_100001279 3300005536 Bacteria 18982
44 Ga0070697_100038006 3300005536 Bacteria 3888
45 Ga0068853_100042488 3300005539 Bacteria 3887
46 Ga0068853_100044639 3300005539 Bacteria 3794
47 Ga0070695_100002172 3300005545 Bacteria 11236
48 Ga0070695_100002262 3300005545 Bacteria 11029
49 Ga0070695_100003602 3300005545 Bacteria 9043
50 Ga0070695_100009483 3300005545 Bacteria 5797
51 Ga0070695_100015509 3300005545 Bacteria 4602
52 Ga0070695_100032741 3300005545 Bacteria 3250
53 Ga0070696_100007509 3300005546 Bacteria 7292
54 Ga0070696_100008923 3300005546 Bacteria 6710
55 Ga0070696_100025098 3300005546 Bacteria 4050
56 Ga0070696_100031871 3300005546 Bacteria 3615
57 Ga0070665_100046813 3300005548 Bacteria 4342
58 Ga0070704_100005172 3300005549 Bacteria 7588
59 Ga0070704_100006027 3300005549 Bacteria 7109
60 Ga0070704_100021656 3300005549 Bacteria 4171
61 Ga0068855_100001437 3300005563 Bacteria 29647
62 Ga0068855_100063852 3300005563 Bacteria 4296
63 Ga0070664_100000582 3300005564 Bacteria 27819
64 Ga0070664_100011940 3300005564 Bacteria 7052
65 Ga0068857_100019934 3300005577 Bacteria 5894
66 Ga0068857_100032749 3300005577 Bacteria 4594
67 Ga0070702_100035533 3300005615 Bacteria 2753
68 Ga0068863_100073726 3300005841 Bacteria 3230
69 Ga0081455_10008540 3300005937 Bacteria 10630
70 Ga0081540_1000382 3300005983 Bacteria 44485
71 Ga0081540_1020055 3300005983 Bacteria 4035
72 Ga0070717_10036608 3300006028 Bacteria 3981
73 Ga0075428_100030510 3300006844 Bacteria 5962
74 Ga0075428_100032948 3300006844 Bacteria 5721
75 Ga0075428_100086775 3300006844 Bacteria 3413
76 Ga0075431_100031706 3300006847 Bacteria 5444
77 Ga0075433_10000498 3300006852 Bacteria 25613
78 Ga0075433_10007070 3300006852 Bacteria 8889
79 Ga0075433_10064902 3300006852 Bacteria 3201
80 Ga0075434_100002054 3300006871 Bacteria 17480
81 Ga0075434_100003798 3300006871 Bacteria 13504
82 Ga0075434_100010303 3300006871 Bacteria 8763
83 Ga0075434_100035907 3300006871 Bacteria 4901
84 Ga0075429_100001426 3300006880 Bacteria 19616
85 Ga0068865_100017306 3300006881 Bacteria 4634
86 Ga0075436_100036396 3300006914 Bacteria 3397
87 Ga0075435_100002617 3300007076 Bacteria 12001
88 Ga0075435_100021572 3300007076 Bacteria 4956
89 Ga0099794_10000041 3300007265 Bacteria 50642
90 Ga0105240_10020738 3300009093 Bacteria 8755
91 Ga0105240_10047909 3300009093 Bacteria 5405
92 Ga0105240_10061731 3300009093 Bacteria 4669
93 Ga0111539_10000873 3300009094 Bacteria 39350
94 Ga0111539_10003596 3300009094 Bacteria 20435
95 Ga0111539_10106529 3300009094 Bacteria 3289
96 Ga0111539_10118881 3300009094 Bacteria 3097
97 Ga0111539_10187618 3300009094 Bacteria 2414
98 Ga0105245_10019786 3300009098 Bacteria 5901
99 Ga0105245_10037803 3300009098 Bacteria 4292
100 Ga0114129_10036425 3300009147 Bacteria 6947
101 Ga0114129_10177085 3300009147 Bacteria 2904
102 Ga0105241_10037365 3300009174 Bacteria 3658
103 Ga0105246_10048209 3300011119 Bacteria 2912
104 Ga0157373_10000407 3300013100 Bacteria 34540
105 Ga0157370_10000230 3300013104 Bacteria 71559
106 Ga0157369_10004985 3300013105 Bacteria 15541
107 Ga0157378_10010856 3300013297 Bacteria 7965
108 Ga0157372_10001997 3300013307 Bacteria 22153
109 Ga0163163_10040965 3300014325 Bacteria 4527
110 Ga0207653_10000037 3300025885 Bacteria 99765
111 Ga0207643_10013752 3300025908 Bacteria 4390
112 Ga0207654_10022506 3300025911 Bacteria 3363
113 Ga0207707_10004088 3300025912 Bacteria 12923
114 Ga0207707_10018922 3300025912 Bacteria 6004
115 Ga0207707_10019174 3300025912 Bacteria 5970
116 Ga0207695_10029717 3300025913 Bacteria 6030
117 Ga0207695_10033801 3300025913 Bacteria 5570
118 Ga0207660_10006562 3300025917 Bacteria 7551
119 Ga0207660_10023923 3300025917 Bacteria 4130
120 Ga0207649_10004930 3300025920 Bacteria 7215
121 Ga0207652_10007267 3300025921 Bacteria 8924
122 Ga0207652_10042017 3300025921 Bacteria 3889
123 Ga0207646_10006535 3300025922 Bacteria 12032
124 Ga0207646_10101523 3300025922 Bacteria 2579
125 Ga0207687_10021569 3300025927 Bacteria 4280
126 Ga0207700_10008105 3300025928 Bacteria 6484
127 Ga0207670_10042393 3300025936 Bacteria 2998
128 Ga0207669_10039866 3300025937 Bacteria 2719
129 Ga0207689_10111444 3300025942 Bacteria 2249
130 Ga0207661_10000065 3300025944 Bacteria 75600
131 Ga0207661_10014815 3300025944 Bacteria 5719
132 Ga0207679_10001308 3300025945 Bacteria 15750
133 Ga0207667_10011434 3300025949 Bacteria 10317
134 Ga0207677_10005273 3300026023 Bacteria 7002
135 Ga0207674_10032375 3300026116 Bacteria 5485
136 Ga0207674_10046221 3300026116 Bacteria 4471
137 Ga0207675_100037887 3300026118 Bacteria 4499
138 Ga0210000_1001220 3300027462 Bacteria 3618
139 Ga0209588_1001397 3300027671 Bacteria 6291
140 Ga0209966_1001016 3300027695 Bacteria 5237
141 Ga0207428_10038624 3300027907 Bacteria 3880
142 Ga0265334_10000021 3300028573 Bacteria 132223
143 Ga0265318_10012220 3300028577 Bacteria 3663
144 Ga0265760_10006842 3300031090 Bacteria 3267
145 Ga0265320_10029554 3300031240 Bacteria 2835
146 Ga0307408_100005061 3300031548 Bacteria 8845
147 Ga0307408_100034601 3300031548 Bacteria 3540
148 Ga0265313_10000275 3300031595 Bacteria 56249
149 Ga0316576_10001000 3300031727 Bacteria 14565
150 Ga0316576_10025129 3300031727 Bacteria 4167
151 Ga0316576_10083485 3300031727 Bacteria 2373
152 Ga0316578_10010151 3300031728 Bacteria 4874
153 Ga0307405_10000948 3300031731 Bacteria 11587
154 Ga0307413_10013181 3300031824 Bacteria 4144
155 Ga0307410_10000677 3300031852 Bacteria 14153
156 Ga0307410_10007683 3300031852 Bacteria 5917
157 Ga0307406_10005445 3300031901 Bacteria 6966
158 Ga0307406_10067812 3300031901 Bacteria 2327
159 Ga0307407_10000941 3300031903 Bacteria 9886
160 Ga0307407_10034568 3300031903 Unclassified 2769
161 Ga0307412_10076573 3300031911 Bacteria 2298
162 Ga0307409_100002193 3300031995 Bacteria 10087
163 Ga0307409_100041777 3300031995 Bacteria 3428
164 Ga0307416_100016482 3300032002 Bacteria 5139
165 Ga0307415_100006052 3300032126 Bacteria 6484
166 Ga0316583_10001480 3300032133 Bacteria 7862
167 Ga0373951_0001751 3300035091 Bacteria 5650
168 Ga0373942_0004214 3300035207 Bacteria 3347
169 Ga0316574_0002048 3300035398 Bacteria 9954
170 Ga0316574_0027722 3300035398 Bacteria 3413
171 Ga0373937_0070956 3300036401 Bacteria 3213
172 Ga0316582_0002407 3300036647 Bacteria 8772
173 Ga0316582_0007081 3300036647 Bacteria 5955
174 Ga0316582_0008599 3300036647 Bacteria 5494
175 Ga0316584_0029828 3300036712 Bacteria 4027
176 Ga0395900_0000033 3300037418 Bacteria 260271
177 Ga0400490_19881 3300038726 Bacteria 5192
178 Ga0436360_0498080 3300039438 Bacteria 19473
179 Ga0436360_1203961 3300039438 Bacteria 5305
180 Ga0436361_0544310 3300039447 Bacteria 6415
181 Ga0436362_0343093 3300039453 Bacteria 7916
182 Ga0450908_002555 3300042184 Bacteria 3569
183 Ga0439435_0000054 3300042436 Bacteria 13124
184 Ga0439460_0010849 3300042461 Bacteria 2341
185 Ga0451577_0004490 3300042876 Bacteria 14717
186 Ga0451577_0013343 3300042876 Bacteria 7695
187 Ga0466969_0005706 3300044656 Bacteria 6618
188 Ga0453683_0004230 3300044673 Bacteria 10260
189 Ga0453684_0000203 3300044712 Bacteria 258635
190 Ga0466970_0008873 3300044765 Bacteria 5069
191 Ga0466959_0004541 3300045049 Bacteria 9308
192 Ga0451576_0004648 3300045051 Bacteria 17703
193 Ga0451576_0008399 3300045051 Bacteria 12122
194 Ga0451576_0017554 3300045051 Bacteria 7864
195 Ga0451576_0021180 3300045051 Bacteria 7068
196 Ga0451576_0086640 3300045051 Bacteria 3257
197 Ga0495580_0019035 3300046472 Bacteria 5105
198 Ga0495639_0018579 3300046475 Bacteria 3028
199 Ga0495630_0001085 3300046517 Bacteria 18727
200 Ga0495630_0064181 3300046517 Bacteria 2759
201 Ga0495588_0013409 3300046674 Bacteria 3906
202 Ga0495624_0002835 3300046690 Bacteria 12977
203 Ga0496112_0000398 3300048915 Bacteria 28387
204 Ga0496116_0039263 3300048919 Eukaryota 3274
205 Ga0501034_0011631 3300049571 Bacteria 9111
206 Ga0501202_000929 3300049652 Bacteria 4512
207 Ga0501249_000577 3300049679 Bacteria 8709
208 Ga0501225_0001419 3300049705 Bacteria 7485
209 nmdc:mga05p37_170847_c1 3300050507 Bacteria 2651
210 nmdc:mga09592_3570_c1 3300050508 Bacteria 12558
211 nmdc:mga08y16_187957_c1 3300050511 Bacteria 2143
212 nmdc:mga08y16_3156_c1 3300050511 Bacteria 17073
213 nmdc:mga08y16_99825_c1 3300050511 Bacteria 3022
214 nmdc:mga0n895_12666_c1 3300050512 Bacteria 7572
215 nmdc:mga0n895_257_c1 3300050512 Bacteria 34223
216 nmdc:mga0n895_2946_c1 3300050512 Bacteria 13508
217 nmdc:mga0rr50_64535_c1 3300050513 Bacteria 2770
218 nmdc:mga08x19_20887_c1 3300050514 Bacteria 4036
219 nmdc:mga08x19_30868_c1 3300050514 Bacteria 3368
220 nmdc:mga0a205_140381_c1 3300050515 Bacteria 2316
221 Ga0495601_0018167 3300053077 Bacteria 4277
222 Ga0500622_0002506 3300053156 Bacteria 13203
223 Ga0500638_000001 3300053162 Bacteria 354827
224 Ga0501082_0000052 3300060353 Bacteria 83141
225 Ga0466962_0001624 3300061719 Bacteria 10533
226 2649119407 2648501241 Bacteria 5312320
227 2652974725 2651869818 Bacteria 5864031
228 Ga0070701_10012968
229 JGI25404J52841_10002460
230 Ga0065715_10089531
231 Ga0065715_10108521
232 Ga0070683_100000052
233 Ga0070683_100041547
234 Ga0070680_100003980
235 Ga0070680_100043702
236 Ga0070661_100008098
237 Ga0070661_100030823
238 Ga0070692_10015719
239 Ga0070671_100014271
240 Ga0070674_100016459
241 Ga0070703_10000214
242 Ga0070714_100040986
243 Ga0070713_100116458
244 Ga0070701_10000378
245 Ga0070700_100018172
246 Ga0070694_100010335
247 Ga0070694_100017596
248 Ga0070694_100037193
249 Ga0070708_100000016
250 Ga0070708_100000343
251 Ga0070708_100050597
252 Ga0070678_100006819
253 Ga0070681_10007806
254 Ga0070681_10025365
255 Ga0070681_10058773
256 Ga0070706_100024580
257 Ga0070707_100000867
258 Ga0070698_100018276
259 Ga0070698_100026453
260 Ga0070699_100000005
261 Ga0070699_100004761
262 Ga0070699_100028829
263 Ga0070699_100083486
264 Ga0070699_100096421
265 Ga0070679_100001158
266 Ga0070679_100001512
267 Ga0070679_100014859
268 Ga0070684_100000073
269 Ga0070684_100000156
270 Ga0070697_100001279
271 Ga0070697_100038006
272 Ga0068853_100042488
273 Ga0068853_100044639
274 Ga0070695_100002172
275 Ga0070695_100002262
276 Ga0070695_100003602
277 Ga0070695_100009483
278 Ga0070695_100015509
279 Ga0070695_100032741
280 Ga0070696_100007509
281 Ga0070696_100008923
282 Ga0070696_100025098
283 Ga0070696_100031871
284 Ga0070665_100046813
285 Ga0070704_100005172
286 Ga0070704_100006027
287 Ga0070704_100021656
288 Ga0068855_100001437
289 Ga0068855_100063852
290 Ga0070664_100000582
291 Ga0070664_100011940
292 Ga0068857_100019934
293 Ga0068857_100032749
294 Ga0070702_100035533
295 Ga0068863_100073726
296 Ga0081455_10008540
297 Ga0081540_1000382
298 Ga0081540_1020055
299 Ga0070717_10036608
300 Ga0075428_100030510
301 Ga0075428_100032948
302 Ga0075428_100086775
303 Ga0075431_100031706
304 Ga0075433_10000498
305 Ga0075433_10007070
306 Ga0075433_10064902
307 Ga0075434_100002054
308 Ga0075434_100003798
309 Ga0075434_100010303
310 Ga0075434_100035907
311 Ga0075429_100001426
312 Ga0068865_100017306
313 Ga0075436_100036396
314 Ga0075435_100002617
315 Ga0075435_100021572
316 Ga0099794_10000041
317 Ga0105240_10020738
318 Ga0105240_10047909
319 Ga0105240_10061731
320 Ga0111539_10000873
321 Ga0111539_10003596
322 Ga0111539_10106529
323 Ga0111539_10118881
324 Ga0111539_10187618
325 Ga0105245_10019786
326 Ga0105245_10037803
327 Ga0114129_10036425
328 Ga0114129_10177085
329 Ga0105241_10037365
330 Ga0105246_10048209
331 Ga0157373_10000407
332 Ga0157370_10000230
333 Ga0157369_10004985
334 Ga0157378_10010856
335 Ga0157372_10001997
336 Ga0163163_10040965
337 Ga0207653_10000037
338 Ga0207643_10013752
339 Ga0207654_10022506
340 Ga0207707_10004088
341 Ga0207707_10018922
342 Ga0207707_10019174
343 Ga0207695_10029717
344 Ga0207695_10033801
345 Ga0207660_10006562
346 Ga0207660_10023923
347 Ga0207649_10004930
348 Ga0207652_10007267
349 Ga0207652_10042017
350 Ga0207646_10006535
351 Ga0207646_10101523
352 Ga0207687_10021569
353 Ga0207700_10008105
354 Ga0207670_10042393
355 Ga0207669_10039866
356 Ga0207689_10111444
357 Ga0207661_10000065
358 Ga0207661_10014815
359 Ga0207679_10001308
360 Ga0207667_10011434
361 Ga0207677_10005273
362 Ga0207674_10032375
363 Ga0207674_10046221
364 Ga0207675_100037887
365 Ga0210000_1001220
366 Ga0209588_1001397
367 Ga0209966_1001016
368 Ga0207428_10038624
369 Ga0265334_10000021
370 Ga0265318_10012220
371 Ga0265760_10006842
372 Ga0265320_10029554
373 Ga0307408_100005061
374 Ga0307408_100034601
375 Ga0265313_10000275
376 Ga0316576_10001000
377 Ga0316576_10025129
378 Ga0316576_10083485
379 Ga0316578_10010151
380 Ga0307405_10000948
381 Ga0307413_10013181
382 Ga0307410_10000677
383 Ga0307410_10007683
384 Ga0307406_10005445
385 Ga0307406_10067812
386 Ga0307407_10000941
387 Ga0307407_10034568
388 Ga0307412_10076573
389 Ga0307409_100002193
390 Ga0307409_100041777
391 Ga0307416_100016482
392 Ga0307415_100006052
393 Ga0316583_10001480
394 Ga0373951_0001751
395 Ga0373942_0004214
396 Ga0316574_0002048
397 Ga0316574_0027722
398 Ga0373937_0070956
399 Ga0316582_0002407
400 Ga0316582_0007081
401 Ga0316582_0008599
402 Ga0316584_0029828
403 Ga0395900_0000033
404 Ga0400490_19881
405 Ga0436360_0498080
406 Ga0436360_1203961
407 Ga0436361_0544310
408 Ga0436362_0343093
409 Ga0450908_002555
410 Ga0439435_0000054
411 Ga0439460_0010849
412 Ga0451577_0004490
413 Ga0451577_0013343
414 Ga0466969_0005706
415 Ga0453683_0004230
416 Ga0453684_0000203
417 Ga0466970_0008873
418 Ga0466959_0004541
419 Ga0451576_0004648
420 Ga0451576_0008399
421 Ga0451576_0017554
422 Ga0451576_0021180
423 Ga0451576_0086640
424 Ga0495580_0019035
425 Ga0495639_0018579
426 Ga0495630_0001085
427 Ga0495630_0064181
428 Ga0495588_0013409
429 Ga0495624_0002835
430 Ga0496112_0000398
431 Ga0496116_0039263
432 Ga0501034_0011631
433 Ga0501202_000929
434 Ga0501249_000577
435 Ga0501225_0001419
436 nmdc:mga05p37_170847_c1
437 nmdc:mga09592_3570_c1
438 nmdc:mga08y16_187957_c1
439 nmdc:mga08y16_3156_c1
440 nmdc:mga08y16_99825_c1
441 nmdc:mga0n895_12666_c1
442 nmdc:mga0n895_257_c1
443 nmdc:mga0n895_2946_c1
444 nmdc:mga0rr50_64535_c1
445 nmdc:mga08x19_20887_c1
446 nmdc:mga08x19_30868_c1
447 nmdc:mga0a205_140381_c1
448 Ga0495601_0018167
449 Ga0500622_0002506
450 Ga0500638_000001
451 Ga0501082_0000052
452 Ga0466962_0001624
453 2649119407
454 2652974725

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02897

Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

36

493

0.97

PF00326

Peptidase_S9

Prolyl oligopeptidase family

549

765

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1e5t-assembly1.cif.gz_A prolyl oligopeptidase from porcine brain, mutant 0.9753 41 719
3ivm-assembly1.cif.gz_A appep_wt+pp closed state 0.9739 41 717
3ddu-assembly1.cif.gz_A prolyl oligopeptidase with gsk552 0.9726 41 719
3mun-assembly1.cif.gz_A appep_pepclose closed state 0.9725 41 717
1vz2-assembly1.cif.gz_A prolyl oligopeptidase from porcine brain, y73c/v427c/c255t mutant 0.9723 39 719
ID Description Score Start End Superfamily
3munA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9879 451 717 3.40.50.1820
af_A0A1D6E3C1_444_645_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9875 451 636 3.40.50.1820
af_I1JSY1_436_727_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9754 451 719 3.40.50.1820
5uw6B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9752 451 720 3.40.50.1820
5n4cC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.97 450 719 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A1I8AI13-F1-model_v4 Prolyl endopeptidase (EC 3.4.21.-) 0.9991 525 642 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-K1RMA4-F1-model_v4 prolyl oligopeptidase (EC 3.4.21.26) 0.9952 485 713 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-A0A3N5YG24-F1-model_v4 prolyl oligopeptidase (EC 3.4.21.26) 0.9917 478 719 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-A0A2V7J8K0-F1-model_v4 prolyl oligopeptidase (EC 3.4.21.26) 0.9909 476 719 GO:0004252
GO:0005829
GO:0006508
GO:0070012
AF-A0A7C7STT5-F1-model_v4 prolyl oligopeptidase (EC 3.4.21.26) 0.9906 42 719 GO:0004252
GO:0005829
GO:0006508
GO:0070012

Map