F339349

General Info

Members Datasets Scaffolds Average Seq Length
226 166 226 245

Family's Representative Sequence

Representative Sequence 3300053077|Ga0495601_0006389|Ga0495601_0006389_329_1162
Length 277
Sequence LSNTTAARFAIAPSYDRPVPAGFTDGSLIPRYGRARRDPSLAVLEGLHPLKHALRFGATVREVLCADLAGLERLAERLAPDVCAEMVSLAREVPEEVFAELAPLTPSTGVISLAERPTIDPDAVLADPRRAPVVLLEDPRDLGNMGACVRVSAAADAAAVLTTGGHDPWHPDALRGGAGLHYALPVARLPGGLPPAGDRPLLALDPEGDALDPERLPARAILAFGTERHGLSAELLARADARVAIPMRTGVSSLNLATSVAAVLFAWRLCPRASGLR

Samples

Sample ID Description Type Environment
1 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
81 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
90 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
91 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
101 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
110 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
119 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
161 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
162 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
163 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.44
Nodule 0
Rhizoplane 11.06
Rhizosphere 82.74
Stem 0
Stem Tuber 0
Unclassified 5.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24746J21847_1000018 3300001977 Bacteria 15938
2 Ga0070683_100002841 3300005329 Bacteria 13861
3 Ga0070683_100132410 3300005329 Bacteria 2360
4 Ga0070666_10007072 3300005335 Bacteria 6916
5 Ga0070682_100000080 3300005337 Bacteria 85683
6 Ga0068868_100001009 3300005338 Bacteria 19259
7 Ga0070668_100572569 3300005347 Bacteria 985
8 Ga0070674_100000006 3300005356 Bacteria 150063
9 Ga0070688_100054975 3300005365 Bacteria 2496
10 Ga0070667_100018275 3300005367 Bacteria 5812
11 Ga0070713_100046002 3300005436 Bacteria 3579
12 Ga0070710_10087513 3300005437 Bacteria 1831
13 Ga0070711_100013523 3300005439 Bacteria 5125
14 Ga0070711_100215618 3300005439 Bacteria 1489
15 Ga0070663_100017344 3300005455 Bacteria 4699
16 Ga0070663_100045078 3300005455 Bacteria 3114
17 Ga0070681_10151883 3300005458 Bacteria 2242
18 Ga0070685_10028970 3300005466 Bacteria 3073
19 Ga0070679_100006595 3300005530 Bacteria 10815
20 Ga0070684_100179796 3300005535 Bacteria 1923
21 Ga0070684_100312504 3300005535 Bacteria 1443
22 Ga0070672_100000004 3300005543 Bacteria 129970
23 Ga0070686_100237584 3300005544 Bacteria 1325
24 Ga0070665_100001712 3300005548 Bacteria 25155
25 Ga0070665_100259132 3300005548 Bacteria 1740
26 Ga0070664_100099470 3300005564 Bacteria 2528
27 Ga0070664_100228346 3300005564 Bacteria 1668
28 Ga0068854_100000212 3300005578 Bacteria 39011
29 Ga0068856_100000064 3300005614 Bacteria 98907
30 Ga0070702_100051617 3300005615 Bacteria 2355
31 Ga0068852_100000467 3300005616 Bacteria 26599
32 Ga0068866_10000793 3300005718 Bacteria 14172
33 Ga0068851_10002468 3300005834 Bacteria 8127
34 Ga0068858_100000033 3300005842 Bacteria 142748
35 Ga0068858_100131866 3300005842 Bacteria 2344
36 Ga0081455_10029901 3300005937 Bacteria 4960
37 Ga0070716_100060764 3300006173 Bacteria 2184
38 Ga0070712_100001953 3300006175 Bacteria 12628
39 Ga0070712_100400199 3300006175 Bacteria 1134
40 Ga0068871_100147886 3300006358 Bacteria 2002
41 Ga0075433_10000101 3300006852 Bacteria 41420
42 Ga0068865_100000017 3300006881 Bacteria 109636
43 Ga0105245_10000056 3300009098 Bacteria 124109
44 Ga0105242_10028838 3300009176 Bacteria 4421
45 Ga0105248_10000032 3300009177 Bacteria 201114
46 Ga0105238_10946714 3300009551 Bacteria 881
47 Ga0105239_10020981 3300010375 Bacteria 7209
48 Ga0105239_10253380 3300010375 Bacteria 1977
49 Ga0157369_10000099 3300013105 Bacteria 120032
50 Ga0157372_10000473 3300013307 Bacteria 44380
51 Ga0157379_10282139 3300014968 Bacteria 1512
52 Ga0157376_10016239 3300014969 Bacteria 5645
53 Ga0207656_10001327 3300025321 Bacteria 8138
54 Ga0207642_10000379 3300025899 Bacteria 13344
55 Ga0207680_10012913 3300025903 Bacteria 4269
56 Ga0207680_10030920 3300025903 Bacteria 3027
57 Ga0207654_10072990 3300025911 Bacteria 2044
58 Ga0207707_10561212 3300025912 Bacteria 969
59 Ga0207693_10000853 3300025915 Bacteria 27203
60 Ga0207693_10055706 3300025915 Bacteria 3102
61 Ga0207663_10021032 3300025916 Bacteria 3707
62 Ga0207663_10021348 3300025916 Bacteria 3685
63 Ga0207649_10436474 3300025920 Bacteria 986
64 Ga0207652_10004934 3300025921 Bacteria 10799
65 Ga0207687_10000007 3300025927 Bacteria 604185
66 Ga0207700_10071665 3300025928 Bacteria 2669
67 Ga0207664_10440092 3300025929 Bacteria 1163
68 Ga0207686_10375043 3300025934 Bacteria 1077
69 Ga0207669_10000010 3300025937 Bacteria 150070
70 Ga0207704_10000025 3300025938 Bacteria 135523
71 Ga0207711_10000020 3300025941 Bacteria 363325
72 Ga0207661_10029167 3300025944 Bacteria 4235
73 Ga0207661_10034229 3300025944 Bacteria 3949
74 Ga0207661_10063127 3300025944 Bacteria 2999
75 Ga0207651_10227581 3300025960 Bacteria 1512
76 Ga0207668_10216447 3300025972 Bacteria 1535
77 Ga0207640_10000137 3300025981 Bacteria 54133
78 Ga0207658_10032091 3300025986 Bacteria 3735
79 Ga0207677_10003422 3300026023 Bacteria 8412
80 Ga0207703_10000577 3300026035 Bacteria 37419
81 Ga0207678_10035563 3300026067 Bacteria 4337
82 Ga0207698_10000041 3300026142 Bacteria 97882
83 Ga0268266_10000216 3300028379 Bacteria 100792
84 Ga0268266_10000553 3300028379 Bacteria 52199
85 Ga0268266_10106688 3300028379 Bacteria 2476
86 Ga0265319_1000129 3300028563 Bacteria 56419
87 Ga0265318_10007380 3300028577 Bacteria 4973
88 Ga0265336_10000017 3300028666 Bacteria 231370
89 Ga0265338_10000044 3300028800 Bacteria 223643
90 Ga0265324_10001180 3300029957 Bacteria 15573
91 Ga0265340_10000003 3300031247 Bacteria 320583
92 Ga0265339_10027067 3300031249 Bacteria 3279
93 Ga0265327_10011652 3300031251 Bacteria 6029
94 Ga0265316_10161747 3300031344 Bacteria 1673
95 Ga0373937_0666441 3300036401 Bacteria 986
96 Ga0466969_0049326 3300044656 Bacteria 2078
97 Ga0466965_0090533 3300044683 Unclassified 1556
98 Ga0466963_0017300 3300044694 Bacteria 4493
99 Ga0466957_0007826 3300044842 Bacteria 6056
100 Ga0466959_0006975 3300045049 Bacteria 7894
101 Ga0466958_0020834 3300045836 Bacteria 3826
102 Ga0466967_0282728 3300045976 Bacteria 1592
103 Ga0466967_0659116 3300045976 Bacteria 1035
104 Ga0466967_0721449 3300045976 Bacteria 988
105 Ga0495603_0000049 3300046455 Bacteria 51075
106 Ga0495603_0001792 3300046455 Bacteria 12677
107 Ga0495629_0006328 3300046459 Bacteria 8782
108 Ga0495629_0017132 3300046459 Bacteria 5197
109 Ga0495641_0049969 3300046461 Bacteria 1913
110 Ga0495653_0000091 3300046463 Bacteria 75172
111 Ga0495653_0020752 3300046463 Bacteria 5321
112 Ga0495662_0044699 3300046476 Bacteria 2138
113 Ga0495606_0000211 3300046507 Bacteria 103386
114 Ga0495618_0000053 3300046514 Bacteria 84115
115 Ga0495618_0000107 3300046514 Bacteria 60640
116 Ga0495628_0058008 3300046516 Bacteria 3044
117 Ga0495630_0000180 3300046517 Bacteria 49275
118 Ga0495630_0000560 3300046517 Bacteria 27056
119 Ga0495652_0285782 3300046529 Bacteria 1206
120 Ga0495640_0020999 3300046533 Bacteria 4799
121 Ga0495645_0000032 3300046543 Bacteria 106333
122 Ga0495645_0000315 3300046543 Bacteria 34756
123 Ga0495634_0002325 3300046642 Bacteria 15909
124 Ga0495634_0157130 3300046642 Bacteria 1435
125 Ga0495588_0000311 3300046674 Bacteria 33416
126 Ga0495657_0000016 3300046675 Bacteria 183127
127 Ga0495646_0085317 3300046680 Unclassified 1833
128 Ga0495647_0002292 3300046681 Bacteria 6002
129 Ga0495647_0230766 3300046681 Unclassified 819
130 Ga0495658_0000876 3300046683 Bacteria 16174
131 Ga0495658_0033911 3300046683 Bacteria 2799
132 Ga0495613_0000042 3300046689 Bacteria 130403
133 Ga0495613_0114024 3300046689 Bacteria 1946
134 Ga0495600_0001563 3300046809 Bacteria 12740
135 Ga0495604_0000013 3300047317 Bacteria 234578
136 Ga0495676_0036876 3300047321 Bacteria 4077
137 Ga0495676_0216856 3300047321 Bacteria 1321
138 Ga0495675_0104237 3300047444 Bacteria 1773
139 Ga0495685_039042 3300047447 Bacteria 1625
140 Ga0495684_0074347 3300047471 Bacteria 2582
141 Ga0495684_0268577 3300047471 Bacteria 1235
142 Ga0496100_0000049 3300048903 Bacteria 75590
143 Ga0496100_0000105 3300048903 Bacteria 48698
144 Ga0496101_0000010 3300048904 Bacteria 281990
145 Ga0496101_0005434 3300048904 Bacteria 8119
146 Ga0496102_0194574 3300048905 Bacteria 1911
147 Ga0496103_0012702 3300048906 Bacteria 4996
148 Ga0496104_0019646 3300048907 Bacteria 6186
149 Ga0496105_0005011 3300048908 Bacteria 10025
150 Ga0496106_0000018 3300048909 Bacteria 175028
151 Ga0496107_0000032 3300048910 Bacteria 99848
152 Ga0496108_0011356 3300048911 Bacteria 7240
153 Ga0496108_0060928 3300048911 Bacteria 3175
154 Ga0496109_0000252 3300048912 Bacteria 51599
155 Ga0496109_0079876 3300048912 Bacteria 3014
156 Ga0496110_0000386 3300048913 Bacteria 29667
157 Ga0496110_0023131 3300048913 Bacteria 5285
158 Ga0496111_0000225 3300048914 Bacteria 26948
159 Ga0496112_0000003 3300048915 Bacteria 660147
160 Ga0496112_0000362 3300048915 Bacteria 29649
161 Ga0496113_0000127 3300048916 Bacteria 33059
162 Ga0496113_0027791 3300048916 Bacteria 4060
163 Ga0496113_0202184 3300048916 Bacteria 1579
164 Ga0496113_0231086 3300048916 Bacteria 1475
165 Ga0496115_0000020 3300048918 Bacteria 171995
166 Ga0496115_0182318 3300048918 Bacteria 1735
167 Ga0496117_0002954 3300048920 Bacteria 20541
168 Ga0496117_0315178 3300048920 Bacteria 822
169 Ga0496118_0004753 3300048921 Bacteria 15891
170 Ga0496119_0003832 3300048922 Bacteria 15365
171 Ga0496119_0143612 3300048922 Bacteria 1286
172 Ga0496120_0005784 3300048923 Bacteria 9702
173 Ga0496121_0010383 3300048924 Bacteria 10516
174 Ga0496124_0101859 3300048927 Bacteria 2326
175 Ga0496125_0012003 3300048928 Bacteria 8626
176 Ga0496125_0042797 3300048928 Bacteria 3852
177 Ga0496126_0028565 3300048929 Bacteria 5313
178 Ga0496126_0113403 3300048929 Bacteria 2359
179 Ga0496126_0123850 3300048929 Bacteria 2239
180 Ga0501032_0008043 3300049569 Bacteria 7687
181 Ga0501032_0235271 3300049569 Bacteria 1191
182 Ga0501033_0002263 3300049570 Bacteria 16466
183 Ga0501034_0059181 3300049571 Bacteria 3849
184 Ga0501034_0069874 3300049571 Bacteria 3522
185 Ga0501034_0480997 3300049571 Bacteria 1157
186 Ga0501036_0003410 3300049572 Bacteria 12699
187 Ga0501037_0002972 3300049573 Bacteria 12304
188 Ga0501038_0002428 3300049574 Bacteria 17360
189 Ga0501040_0013934 3300049576 Bacteria 5294
190 Ga0501042_0028268 3300049578 Bacteria 3949
191 Ga0501043_0003413 3300049579 Bacteria 13058
192 Ga0501046_0002383 3300049580 Bacteria 17661
193 Ga0501047_0001696 3300049581 Bacteria 21417
194 Ga0501047_0006433 3300049581 Bacteria 11052
195 Ga0501047_0034767 3300049581 Bacteria 4866
196 Ga0501047_0234452 3300049581 Bacteria 1687
197 Ga0501048_0003200 3300049582 Bacteria 12478
198 Ga0501067_0060339 3300049583 Bacteria 2099
199 Ga0501068_0008089 3300049584 Bacteria 5836
200 Ga0501069_0041967 3300049585 Bacteria 2529
201 Ga0501070_0003901 3300049586 Bacteria 12866
202 Ga0501070_0003918 3300049586 Bacteria 12842
203 Ga0501070_0046080 3300049586 Bacteria 3625
204 Ga0501072_0210121 3300049588 Bacteria 1551
205 Ga0501073_0002918 3300049589 Bacteria 12833
206 Ga0501074_0029971 3300049590 Bacteria 3943
207 Ga0501074_0264401 3300049590 Bacteria 1223
208 Ga0501075_0089310 3300049591 Bacteria 2337
209 Ga0501079_0078012 3300049741 Bacteria 2562
210 Ga0501080_0042855 3300049742 Bacteria 4213
211 Ga0501083_0002677 3300049744 Bacteria 12264
212 Ga0501083_0038051 3300049744 Bacteria 3271
213 Ga0501035_0004873 3300049822 Bacteria 12731
214 Ga0501044_0002144 3300049823 Bacteria 22621
215 Ga0501044_0028263 3300049823 Bacteria 5920
216 Ga0501044_0389052 3300049823 Bacteria 1309
217 Ga0501045_0072762 3300049824 Bacteria 2531
218 nmdc:mga0a205_911_c1 3300050515 Bacteria 24353
219 Ga0495601_0006389 3300053077 Bacteria 6891
220 Ga0495612_0000127 3300053078 Bacteria 32175
221 Ga0495619_0000022 3300053085 Bacteria 184144
222 Ga0495619_0001462 3300053085 Bacteria 15570
223 Ga0495619_0004386 3300053085 Bacteria 8998
224 Ga0495619_0373277 3300053085 Bacteria 986
225 Ga0500566_0007985 3300053094 Bacteria 6264
226 Ga0466962_0214688 3300061719 Unclassified 941

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049588 Ga0501072_0210121 Ga0501072_0210121_903_1541 206
2 3300048922 Ga0496119_0003832 Ga0496119_0003832_224_985 207
3 3300046463 Ga0495653_0020752 Ga0495653_0020752_4410_5171 214
4 3300048920 Ga0496117_0315178 Ga0496117_0315178_33_698 214
5 3300013307 Ga0157372_10000473 Ga0157372_1000047319 215
6 3300046455 Ga0495603_0001792 Ga0495603_0001792_8835_9518 216
7 3300048913 Ga0496110_0000386 Ga0496110_0000386_15683_16438 216
8 3300048914 Ga0496111_0000225 Ga0496111_0000225_10257_11012 216
9 3300048915 Ga0496112_0000003 Ga0496112_0000003_273794_274564 216
10 3300046514 Ga0495618_0000107 Ga0495618_0000107_15194_16183 218
11 3300047471 Ga0495684_0268577 Ga0495684_0268577_429_1178 218
12 3300005337 Ga0070682_100000080 Ga0070682_10000008031 219
13 3300005842 Ga0068858_100000033 Ga0068858_10000003332 219
14 3300010375 Ga0105239_10020981 Ga0105239_100209814 219
15 3300025911 Ga0207654_10072990 Ga0207654_100729903 219
16 3300026035 Ga0207703_10000577 Ga0207703_1000057734 219
17 3300045976 Ga0466967_0659116 Ga0466967_0659116_360_1025 219
18 3300006881 Ga0068865_100000017 Ga0068865_10000001779 221
19 3300025938 Ga0207704_10000025 Ga0207704_1000002570 221
20 3300046459 Ga0495629_0006328 Ga0495629_0006328_1739_2491 221
21 3300005439 Ga0070711_100215618 Ga0070711_1002156182 222
22 3300009177 Ga0105248_10000032 Ga0105248_1000003284 222
23 3300025929 Ga0207664_10440092 Ga0207664_104400922 222
24 3300025941 Ga0207711_10000020 Ga0207711_10000020290 222
25 3300044694 Ga0466963_0017300 Ga0466963_0017300_190_966 222
26 3300048903 Ga0496100_0000105 Ga0496100_0000105_18492_19268 222
27 3300048904 Ga0496101_0005434 Ga0496101_0005434_1825_2601 222
28 3300046683 Ga0495658_0000876 Ga0495658_0000876_2059_2832 224
29 3300053085 Ga0495619_0000022 Ga0495619_0000022_98068_98841 224
30 3300005937 Ga0081455_10029901 Ga0081455_100299012 225
31 3300006852 Ga0075433_10000101 Ga0075433_1000010132 225
32 3300025972 Ga0207668_10216447 Ga0207668_102164472 225
33 3300044842 Ga0466957_0007826 Ga0466957_0007826_4193_4876 225
34 3300045049 Ga0466959_0006975 Ga0466959_0006975_6166_6849 225
35 3300045836 Ga0466958_0020834 Ga0466958_0020834_229_912 225
36 3300046543 Ga0495645_0000032 Ga0495645_0000032_136_915 225
37 3300049569 Ga0501032_0008043 Ga0501032_0008043_4532_5227 225
38 3300049570 Ga0501033_0002263 Ga0501033_0002263_9526_10221 225
39 3300049571 Ga0501034_0069874 Ga0501034_0069874_2106_2801 225
40 3300049572 Ga0501036_0003410 Ga0501036_0003410_2451_3146 225
41 3300049573 Ga0501037_0002972 Ga0501037_0002972_2056_2751 225
42 3300049574 Ga0501038_0002428 Ga0501038_0002428_2199_2894 225
43 3300049576 Ga0501040_0013934 Ga0501040_0013934_2446_3141 225
44 3300049578 Ga0501042_0028268 Ga0501042_0028268_2577_3272 225
45 3300049579 Ga0501043_0003413 Ga0501043_0003413_2657_3352 225
46 3300049580 Ga0501046_0002383 Ga0501046_0002383_2490_3185 225
47 3300049581 Ga0501047_0001696 Ga0501047_0001696_14477_15172 225
48 3300049582 Ga0501048_0003200 Ga0501048_0003200_9708_10403 225
49 3300049583 Ga0501067_0060339 Ga0501067_0060339_81_776 225
50 3300049584 Ga0501068_0008089 Ga0501068_0008089_4805_5500 225
51 3300049586 Ga0501070_0003901 Ga0501070_0003901_9610_10305 225
52 3300049589 Ga0501073_0002918 Ga0501073_0002918_9648_10343 225
53 3300049590 Ga0501074_0029971 Ga0501074_0029971_1192_1887 225
54 3300049741 Ga0501079_0078012 Ga0501079_0078012_16_711 225
55 3300049744 Ga0501083_0002677 Ga0501083_0002677_9543_10238 225
56 3300049822 Ga0501035_0004873 Ga0501035_0004873_2515_3210 225
57 3300049823 Ga0501044_0002144 Ga0501044_0002144_12373_13068 225
58 3300049824 Ga0501045_0072762 Ga0501045_0072762_1369_2064 225
59 3300050515 nmdc:mga0a205_911_c1 nmdc:mga0a205_911_c1_11627_12412 225
60 3300061719 Ga0466962_0214688 Ga0466962_0214688_122_805 225
61 3300048915 Ga0496112_0000362 Ga0496112_0000362_15918_16703 226
62 3300048916 Ga0496113_0000127 Ga0496113_0000127_12971_13756 226
63 3300005544 Ga0070686_100237584 Ga0070686_1002375842 227
64 3300005834 Ga0068851_10002468 Ga0068851_100024687 227
65 3300025321 Ga0207656_10001327 Ga0207656_100013274 227
66 3300046533 Ga0495640_0020999 Ga0495640_0020999_911_1714 229
67 3300046642 Ga0495634_0157130 Ga0495634_0157130_484_1218 229
68 3300048913 Ga0496110_0023131 Ga0496110_0023131_2522_3292 229
69 3300005548 Ga0070665_100001712 Ga0070665_1000017124 230
70 3300006173 Ga0070716_100060764 Ga0070716_1000607641 230
71 3300009098 Ga0105245_10000056 Ga0105245_1000005637 230
72 3300025927 Ga0207687_10000007 Ga0207687_1000000785 230
73 3300028379 Ga0268266_10000553 Ga0268266_100005536 230
74 3300046680 Ga0495646_0085317 Ga0495646_0085317_549_1328 230
75 3300005338 Ga0068868_100001009 Ga0068868_1000010096 231
76 3300005347 Ga0070668_100572569 Ga0070668_1005725692 231
77 3300025960 Ga0207651_10227581 Ga0207651_102275812 231
78 3300026023 Ga0207677_10003422 Ga0207677_100034223 231
79 3300031344 Ga0265316_10161747 Ga0265316_101617472 231
80 3300005365 Ga0070688_100054975 Ga0070688_1000549753 232
81 3300005466 Ga0070685_10028970 Ga0070685_100289702 232
82 3300006175 Ga0070712_100001953 Ga0070712_10000195313 232
83 3300025915 Ga0207693_10000853 Ga0207693_100008539 232
84 3300046459 Ga0495629_0017132 Ga0495629_0017132_543_1283 232
85 3300047317 Ga0495604_0000013 Ga0495604_0000013_212723_213487 232
86 3300048911 Ga0496108_0011356 Ga0496108_0011356_1184_1957 232
87 3300048912 Ga0496109_0000252 Ga0496109_0000252_11882_12655 232
88 3300053094 Ga0500566_0007985 Ga0500566_0007985_4093_4833 232
89 3300005436 Ga0070713_100046002 Ga0070713_1000460023 233
90 3300025916 Ga0207663_10021348 Ga0207663_100213482 233
91 3300025928 Ga0207700_10071665 Ga0207700_100716653 233
92 3300048911 Ga0496108_0060928 Ga0496108_0060928_2048_2794 233
93 3300048912 Ga0496109_0079876 Ga0496109_0079876_104_850 233
94 3300048916 Ga0496113_0202184 Ga0496113_0202184_297_1043 233
95 3300045976 Ga0466967_0282728 Ga0466967_0282728_24_767 235
96 3300046514 Ga0495618_0000053 Ga0495618_0000053_16862_17596 237
97 3300046809 Ga0495600_0001563 Ga0495600_0001563_9320_10054 237
98 3300048903 Ga0496100_0000049 Ga0496100_0000049_64983_65723 237
99 3300048904 Ga0496101_0000010 Ga0496101_0000010_34837_35577 237
100 3300048909 Ga0496106_0000018 Ga0496106_0000018_37702_38442 237
101 3300048910 Ga0496107_0000032 Ga0496107_0000032_64320_65060 237
102 3300005578 Ga0068854_100000212 Ga0068854_10000021210 238
103 3300005616 Ga0068852_100000467 Ga0068852_10000046719 238
104 3300025981 Ga0207640_10000137 Ga0207640_1000013733 238
105 3300026142 Ga0207698_10000041 Ga0207698_1000004111 238
106 3300025944 Ga0207661_10063127 Ga0207661_100631272 239
107 3300046516 Ga0495628_0058008 Ga0495628_0058008_38_757 239
108 3300005439 Ga0070711_100013523 Ga0070711_1000135236 242
109 3300025916 Ga0207663_10021032 Ga0207663_100210322 242
110 3300005329 Ga0070683_100132410 Ga0070683_1001324102 243
111 3300005335 Ga0070666_10007072 Ga0070666_100070721 243
112 3300005367 Ga0070667_100018275 Ga0070667_1000182756 243
113 3300005455 Ga0070663_100017344 Ga0070663_1000173442 243
114 3300005458 Ga0070681_10151883 Ga0070681_101518831 243
115 3300005530 Ga0070679_100006595 Ga0070679_1000065955 243
116 3300005535 Ga0070684_100179796 Ga0070684_1001797962 243
117 3300005548 Ga0070665_100259132 Ga0070665_1002591323 243
118 3300005842 Ga0068858_100131866 Ga0068858_1001318663 243
119 3300009551 Ga0105238_10946714 Ga0105238_109467141 243
120 3300010375 Ga0105239_10253380 Ga0105239_102533802 243
121 3300014968 Ga0157379_10282139 Ga0157379_102821392 243
122 3300014969 Ga0157376_10016239 Ga0157376_100162392 243
123 3300025903 Ga0207680_10012913 Ga0207680_100129133 243
124 3300025903 Ga0207680_10030920 Ga0207680_100309204 243
125 3300025912 Ga0207707_10561212 Ga0207707_105612121 243
126 3300025920 Ga0207649_10436474 Ga0207649_104364741 243
127 3300025921 Ga0207652_10004934 Ga0207652_100049348 243
128 3300025944 Ga0207661_10034229 Ga0207661_100342292 243
129 3300025986 Ga0207658_10032091 Ga0207658_100320913 243
130 3300026067 Ga0207678_10035563 Ga0207678_100355635 243
131 3300028379 Ga0268266_10000216 Ga0268266_1000021659 243
132 3300028379 Ga0268266_10106688 Ga0268266_101066882 243
133 3300044656 Ga0466969_0049326 Ga0466969_0049326_959_1711 243
134 3300048905 Ga0496102_0194574 Ga0496102_0194574_651_1412 243
135 3300048906 Ga0496103_0012702 Ga0496103_0012702_2967_3728 243
136 3300048907 Ga0496104_0019646 Ga0496104_0019646_599_1354 243
137 3300048908 Ga0496105_0005011 Ga0496105_0005011_2549_3304 243
138 3300048918 Ga0496115_0000020 Ga0496115_0000020_77097_77837 243
139 3300048920 Ga0496117_0002954 Ga0496117_0002954_10719_11480 243
140 3300048921 Ga0496118_0004753 Ga0496118_0004753_9609_10370 243
141 3300048922 Ga0496119_0143612 Ga0496119_0143612_468_1229 243
142 3300048923 Ga0496120_0005784 Ga0496120_0005784_2955_3716 243
143 3300048924 Ga0496121_0010383 Ga0496121_0010383_6121_6882 243
144 3300048927 Ga0496124_0101859 Ga0496124_0101859_1506_2264 243
145 3300048928 Ga0496125_0012003 Ga0496125_0012003_5821_6582 243
146 3300048928 Ga0496125_0042797 Ga0496125_0042797_2052_2807 243
147 3300048929 Ga0496126_0028565 Ga0496126_0028565_2670_3437 243
148 3300048929 Ga0496126_0113403 Ga0496126_0113403_1555_2322 243
149 3300048929 Ga0496126_0123850 Ga0496126_0123850_356_1114 243
150 3300049569 Ga0501032_0235271 Ga0501032_0235271_26_790 243
151 3300049571 Ga0501034_0059181 Ga0501034_0059181_2034_2792 243
152 3300049571 Ga0501034_0480997 Ga0501034_0480997_101_856 243
153 3300049581 Ga0501047_0006433 Ga0501047_0006433_8099_8863 243
154 3300049581 Ga0501047_0034767 Ga0501047_0034767_2031_2792 243
155 3300049581 Ga0501047_0234452 Ga0501047_0234452_506_1261 243
156 3300049590 Ga0501074_0264401 Ga0501074_0264401_233_988 243
157 3300049744 Ga0501083_0038051 Ga0501083_0038051_478_1239 243
158 3300049823 Ga0501044_0028263 Ga0501044_0028263_4141_4902 243
159 3300049823 Ga0501044_0389052 Ga0501044_0389052_293_1048 243
160 3300005356 Ga0070674_100000006 Ga0070674_10000000632 244
161 3300005535 Ga0070684_100312504 Ga0070684_1003125041 244
162 3300005564 Ga0070664_100099470 Ga0070664_1000994704 244
163 3300005564 Ga0070664_100228346 Ga0070664_1002283462 244
164 3300005615 Ga0070702_100051617 Ga0070702_1000516172 244
165 3300005718 Ga0068866_10000793 Ga0068866_1000079316 244
166 3300006175 Ga0070712_100400199 Ga0070712_1004001992 244
167 3300006358 Ga0068871_100147886 Ga0068871_1001478863 244
168 3300009176 Ga0105242_10028838 Ga0105242_100288381 244
169 3300025899 Ga0207642_10000379 Ga0207642_1000037912 244
170 3300025915 Ga0207693_10055706 Ga0207693_100557064 244
171 3300025934 Ga0207686_10375043 Ga0207686_103750432 244
172 3300025937 Ga0207669_10000010 Ga0207669_10000010126 244
173 3300025944 Ga0207661_10029167 Ga0207661_100291674 244
174 3300028563 Ga0265319_1000129 Ga0265319_100012913 244
175 3300028577 Ga0265318_10007380 Ga0265318_100073804 244
176 3300028666 Ga0265336_10000017 Ga0265336_10000017197 244
177 3300028800 Ga0265338_10000044 Ga0265338_10000044197 244
178 3300029957 Ga0265324_10001180 Ga0265324_100011806 244
179 3300031247 Ga0265340_10000003 Ga0265340_10000003313 244
180 3300031249 Ga0265339_10027067 Ga0265339_100270673 244
181 3300031251 Ga0265327_10011652 Ga0265327_100116522 244
182 3300036401 Ga0373937_0666441 Ga0373937_0666441_186_947 244
183 3300046461 Ga0495641_0049969 Ga0495641_0049969_243_977 244
184 3300046476 Ga0495662_0044699 Ga0495662_0044699_696_1448 244
185 3300046517 Ga0495630_0000560 Ga0495630_0000560_10216_10950 244
186 3300046543 Ga0495645_0000315 Ga0495645_0000315_28516_29304 244
187 3300046681 Ga0495647_0002292 Ga0495647_0002292_4065_4799 244
188 3300046683 Ga0495658_0033911 Ga0495658_0033911_472_1215 244
189 3300046689 Ga0495613_0000042 Ga0495613_0000042_49659_50393 244
190 3300046689 Ga0495613_0114024 Ga0495613_0114024_186_941 244
191 3300047321 Ga0495676_0036876 Ga0495676_0036876_2000_2770 244
192 3300047321 Ga0495676_0216856 Ga0495676_0216856_52_795 244
193 3300047447 Ga0495685_039042 Ga0495685_039042_699_1433 244
194 3300048916 Ga0496113_0027791 Ga0496113_0027791_1841_2593 244
195 3300048916 Ga0496113_0231086 Ga0496113_0231086_454_1194 244
196 3300049585 Ga0501069_0041967 Ga0501069_0041967_884_1675 244
197 3300049586 Ga0501070_0003918 Ga0501070_0003918_7390_8163 244
198 3300049586 Ga0501070_0046080 Ga0501070_0046080_2536_3327 244
199 3300049742 Ga0501080_0042855 Ga0501080_0042855_1794_2585 244
200 3300053085 Ga0495619_0001462 Ga0495619_0001462_13719_14453 244
201 3300053085 Ga0495619_0004386 Ga0495619_0004386_7509_8261 244
202 3300053085 Ga0495619_0373277 Ga0495619_0373277_60_800 244
203 3300001977 JGI24746J21847_1000018 JGI24746J21847_100001812 245
204 3300005329 Ga0070683_100002841 Ga0070683_1000028414 245
205 3300005437 Ga0070710_10087513 Ga0070710_100875132 245
206 3300005455 Ga0070663_100045078 Ga0070663_1000450784 245
207 3300005543 Ga0070672_100000004 Ga0070672_10000000461 245
208 3300005614 Ga0068856_100000064 Ga0068856_1000000647 245
209 3300013105 Ga0157369_10000099 Ga0157369_1000009960 245
210 3300044683 Ga0466965_0090533 Ga0466965_0090533_244_1002 245
211 3300045976 Ga0466967_0721449 Ga0466967_0721449_89_904 245
212 3300046455 Ga0495603_0000049 Ga0495603_0000049_12112_12876 245
213 3300046463 Ga0495653_0000091 Ga0495653_0000091_41153_41932 245
214 3300046507 Ga0495606_0000211 Ga0495606_0000211_84935_85711 245
215 3300046517 Ga0495630_0000180 Ga0495630_0000180_4998_5777 245
216 3300046529 Ga0495652_0285782 Ga0495652_0285782_322_1104 245
217 3300046642 Ga0495634_0002325 Ga0495634_0002325_9340_10101 245
218 3300046674 Ga0495588_0000311 Ga0495588_0000311_22682_23458 245
219 3300046675 Ga0495657_0000016 Ga0495657_0000016_5051_5830 245
220 3300046681 Ga0495647_0230766 Ga0495647_0230766_42_797 245
221 3300047444 Ga0495675_0104237 Ga0495675_0104237_784_1638 245
222 3300047471 Ga0495684_0074347 Ga0495684_0074347_329_1108 245
223 3300048918 Ga0496115_0182318 Ga0496115_0182318_838_1602 245
224 3300049591 Ga0501075_0089310 Ga0501075_0089310_1269_2009 245
225 3300053077 Ga0495601_0006389 Ga0495601_0006389_329_1162 245
226 3300053078 Ga0495612_0000127 Ga0495612_0000127_19549_20382 245

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00588

SpoU_methylase

SpoU rRNA Methylase family

131

265

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gz0-assembly4.cif.gz_E 23s ribosomal rna g2251 2'o-methyltransferase rlmb 0.8834 97 243
4cng-assembly1.cif.gz_B crystal structure of sulfolobus acidocaldarius trmj in complex with s-adenosyl-l-homocysteine 0.8608 108 241
4cne-assembly1.cif.gz_B crystal structure of e.coli trmj in complex with s-adenosyl-l- homocysteine 0.8556 104 244
2ha8-assembly1.cif.gz_B methyltransferase domain of human tar (hiv-1) rna binding protein 1 0.8347 109 244
7e3q-assembly1.cif.gz_B crystal structure of sah bound trml from vibrio vulnificus 0.8277 109 242
ID Description Score Start End Superfamily
3nk7A02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8992 95 242 3.40.1280.10
4x3lA02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8992 108 244 3.40.1280.10
af_Q2FZE0_99_246_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8969 110 243 3.40.1280.10
1x7pB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8851 104 244 3.40.1280.10
af_P9WFY3_121_283_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8796 97 242 3.40.1280.10
ID Description Score Start End GO Terms
AF-A0A3C0EC72-F1-model_v4 tRNA/rRNA methyltransferase SpoU type domain-containing protein 0.9915 91 244 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A7C7IA53-F1-model_v4 rRNA methyltransferase 0.9806 1 244 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-A0A2N0L4D5-F1-model_v4 RNA 2-O ribose methyltransferase substrate binding domain-containing protein 0.9797 1 244 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-A0A1M3BHA3-F1-model_v4 tRNA/rRNA methyltransferase SpoU type domain-containing protein 0.9765 2 244 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A6L7TJP5-F1-model_v4 rRNA methyltransferase 0.9729 1 241 GO:0003723
GO:0006396
GO:0008173
GO:0032259

Feature Viewer

pLDDT pTM Quality
94.4 0.91 High
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Predicted Structure (AlphaFold2)

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