F338160

General Info

Members Datasets Scaffolds Average Seq Length
225 155 450 516

Family's Representative Sequence

Representative Sequence 3300048906|Ga0496103_0013923|Ga0496103_0013923_1792_3606
Length 594
Sequence MSTHDVSSLVAEAALDRPEMLAVVESGGRSVTWGGLEDEVARVATGLGAAGVVAGQRAMVAMGNRIEFVTAYLGVLRAQVVAVPVNPRATSGELARMIADSGSRLVLADAETIATVRDAVRLVRAARAGDTDELDPDLVDRSHDPRVYVVGAEPEDGEQTYDALRAAAPRPVPPLPDPEKLACLLYTSGTSGRPRAAMLTHRALLANIEQAAEVEPPMIHGDDVVLGVLPLFHVYGLNAVLGSVLRHRAKLVLVERFDPQATLDLIDDEAVSVVPVAPPVFAYWMPQEHLRERLGPVRLMLSGSAPLSPELKDRFTEATGIPIHQGYGLTEAAPIVTSTLCSAEPQNGSVGAALPGIEIKLLDEVGQSPEGDDSGEIWIRGANMFSGYWPDGDDGPAAFLDASGDLFLVDRLKELVIVSGFNVYPVEVEDVIREVPGVAEAAVIGVDDPATGEAVVAYVVPAGEAGGVADAVRDHCAVRLARFKQPSRIEVAHGHRQGAEGPAARHRAPPTAGAARMTARVTLYTRPGCHLCDDARVLIERVCAELGEHYDEISIAGDPELERRFGHEVPVTLVDGQQHDYWRVDPARLRAALS

Samples

Sample ID Description Type Environment
1 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
64 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
65 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
72 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
75 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
76 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
81 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
82 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
85 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
89 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
90 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
118 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
121 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
122 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
123 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
126 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
127 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
129 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
130 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
131 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
132 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
133 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
143 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
144 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
145 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
149 2643221615 Nocardioides sp. Root224 Isolate Unclassified
150 2643221641 Nocardioides sp. Root122 Isolate Unclassified
151 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
152 2739367898 Nocardioides sp. CF479 Isolate Unclassified
153 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
154 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
155 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.89
Metatranscriptomes 0
Isolates 3.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.89
Nodule 0.44
Rhizoplane 8
Rhizosphere 73.33
Stem 0
Stem Tuber 0
Unclassified 0.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496103_0013923 3300048906 Bacteria 4775
2 JGI24735J21928_10012939 3300002067 Bacteria 2632
3 JGI25406J46586_10028327 3300003203 Bacteria 2136
4 rootL2_10047026 3300003322 Bacteria 2264
5 Ga0070658_10005154 3300005327 Bacteria 10635
6 Ga0070658_10006407 3300005327 Bacteria 9539
7 Ga0070658_10067680 3300005327 Bacteria 2918
8 Ga0070683_100000595 3300005329 Bacteria 25935
9 Ga0070683_100006572 3300005329 Bacteria 9765
10 Ga0070682_100004727 3300005337 Bacteria 7566
11 Ga0070668_100002088 3300005347 Bacteria 14615
12 Ga0070667_100108124 3300005367 Bacteria 2409
13 Ga0070684_100000974 3300005535 Bacteria 20418
14 Ga0070665_100010276 3300005548 Bacteria 9470
15 Ga0070664_100127734 3300005564 Bacteria 2231
16 Ga0068857_100019761 3300005577 Bacteria 5917
17 Ga0068864_100033828 3300005618 Bacteria 4346
18 Ga0068861_100159634 3300005719 Unclassified 1858
19 Ga0068860_100003178 3300005843 Bacteria 16944
20 Ga0068860_100135146 3300005843 Bacteria 2368
21 Ga0081455_10008117 3300005937 Bacteria 10958
22 Ga0081455_10045196 3300005937 Bacteria 3834
23 Ga0081455_10118372 3300005937 Bacteria 2091
24 Ga0081539_10000015 3300005985 Bacteria 395781
25 Ga0081539_10000362 3300005985 Bacteria 99991
26 Ga0081539_10008025 3300005985 Bacteria 9361
27 Ga0081539_10052531 3300005985 Bacteria 2288
28 Ga0075365_10006841 3300006038 Bacteria 6323
29 Ga0075365_10007449 3300006038 Bacteria 6129
30 Ga0075365_10044969 3300006038 Bacteria 2895
31 Ga0075365_10074571 3300006038 Bacteria 2288
32 Ga0075368_10000043 3300006042 Bacteria 29599
33 Ga0075368_10018026 3300006042 Bacteria 2648
34 Ga0075363_100003991 3300006048 Bacteria 6384
35 Ga0075363_100006037 3300006048 Bacteria 5459
36 Ga0075363_100017067 3300006048 Bacteria 3594
37 Ga0075364_10059681 3300006051 Bacteria 2501
38 Ga0075362_10035683 3300006177 Bacteria 2172
39 Ga0075367_10017387 3300006178 Bacteria 3947
40 Ga0075367_10052787 3300006178 Bacteria 2407
41 Ga0075370_10011164 3300006353 Bacteria 4714
42 Ga0075428_100011787 3300006844 Bacteria 9732
43 Ga0075430_100002550 3300006846 Bacteria 15197
44 Ga0075430_100030995 3300006846 Bacteria 4541
45 Ga0075431_100002750 3300006847 Bacteria 17058
46 Ga0075433_10066522 3300006852 Bacteria 3162
47 Ga0075434_100154013 3300006871 Bacteria 2318
48 Ga0075429_100007467 3300006880 Bacteria 9487
49 Ga0075429_100073532 3300006880 Bacteria 2977
50 Ga0075435_100004060 3300007076 Bacteria 10016
51 Ga0111539_10210432 3300009094 Bacteria 2266
52 Ga0111539_10228442 3300009094 Bacteria 2167
53 Ga0114129_10002093 3300009147 Bacteria 27442
54 Ga0114129_10004135 3300009147 Bacteria 20508
55 Ga0105243_10003944 3300009148 Bacteria 11845
56 Ga0105242_10008402 3300009176 Bacteria 7936
57 Ga0105248_10067837 3300009177 Bacteria 4005
58 Ga0105239_10001253 3300010375 Bacteria 34499
59 Ga0105246_10004009 3300011119 Bacteria 8938
60 Ga0157372_10003008 3300013307 Bacteria 18176
61 Ga0157375_10020640 3300013308 Bacteria 6023
62 Ga0157375_10074307 3300013308 Bacteria 3421
63 Ga0163163_10238423 3300014325 Bacteria 1868
64 Ga0163163_10274591 3300014325 Bacteria 1737
65 Ga0157379_10004243 3300014968 Bacteria 12239
66 Ga0207688_10006289 3300025901 Bacteria 6466
67 Ga0207647_10011271 3300025904 Bacteria 6273
68 Ga0207647_10019396 3300025904 Bacteria 4575
69 Ga0207705_10043819 3300025909 Bacteria 3215
70 Ga0207705_10071321 3300025909 Bacteria 2518
71 Ga0207705_10083058 3300025909 Bacteria 2337
72 Ga0207687_10084580 3300025927 Bacteria 2300
73 Ga0207690_10021621 3300025932 Bacteria 3992
74 Ga0207709_10028465 3300025935 Bacteria 3231
75 Ga0207709_10050588 3300025935 Bacteria 2542
76 Ga0207711_10052648 3300025941 Bacteria 3489
77 Ga0207661_10002542 3300025944 Bacteria 12561
78 Ga0207661_10006484 3300025944 Bacteria 8274
79 Ga0207668_10006741 3300025972 Bacteria 6797
80 Ga0207668_10079776 3300025972 Bacteria 2369
81 Ga0207640_10039820 3300025981 Bacteria 2978
82 Ga0207658_10020758 3300025986 Bacteria 4551
83 Ga0207708_10058464 3300026075 Bacteria 2942
84 Ga0207676_10087604 3300026095 Bacteria 2547
85 Ga0207674_10025492 3300026116 Bacteria 6305
86 Ga0207675_100009144 3300026118 Bacteria 9293
87 Ga0207675_100053880 3300026118 Bacteria 3753
88 Ga0207683_10030078 3300026121 Bacteria 4704
89 Ga0207428_10001674 3300027907 Bacteria 22894
90 Ga0268266_10000509 3300028379 Bacteria 54900
91 Ga0268264_10000193 3300028381 Bacteria 126247
92 Ga0307508_10002658 3300031616 Bacteria 18756
93 Ga0316576_10049287 3300031727 Bacteria 3058
94 Ga0307405_10093649 3300031731 Bacteria 1996
95 Ga0307410_10043056 3300031852 Bacteria 2989
96 Ga0326468_10000266 3300031889 Bacteria 5501
97 Ga0307409_100002523 3300031995 Bacteria 9595
98 Ga0307409_100003817 3300031995 Bacteria 8312
99 Ga0307409_100073744 3300031995 Unclassified 2724
100 Ga0307409_100130127 3300031995 Bacteria 2149
101 Ga0307416_100095511 3300032002 Bacteria 2567
102 Ga0307411_10057363 3300032005 Bacteria 2572
103 Ga0307415_100000142 3300032126 Bacteria 31723
104 Ga0307415_100042298 3300032126 Bacteria 3031
105 Ga0307507_10025428 3300033179 Bacteria 6422
106 Ga0307510_10047878 3300033180 Bacteria 4570
107 Ga0373938_0001873 3300034957 Bacteria 3363
108 Ga0373940_0000286 3300035088 Bacteria 7291
109 Ga0373942_0000185 3300035207 Bacteria 15769
110 Ga0316574_0001260 3300035398 Bacteria 11812
111 Ga0316584_0147549 3300036712 Bacteria 1752
112 Ga0395901_0006072 3300038443 Bacteria 12241
113 Ga0439448_0012649 3300042005 Bacteria 2528
114 Ga0439450_005497 3300042008 Bacteria 2231
115 Ga0439460_0017271 3300042461 Bacteria 1932
116 Ga0466972_0019323 3300044658 Bacteria 3408
117 Ga0466964_0014063 3300044706 Bacteria 3041
118 Ga0466970_0004651 3300044765 Bacteria 6772
119 Ga0466960_0002015 3300044901 Bacteria 7536
120 Ga0466960_0006245 3300044901 Bacteria 4771
121 Ga0466960_0009859 3300044901 Bacteria 3949
122 Ga0466967_0014343 3300045976 Bacteria 6169
123 Ga0466967_0027920 3300045976 Bacteria 4703
124 Ga0466967_0034639 3300045976 Bacteria 4288
125 Ga0466967_0089217 3300045976 Bacteria 2799
126 Ga0495657_0083783 3300046675 Bacteria 2058
127 Ga0495669_0011615 3300046684 Bacteria 3742
128 Ga0496101_0030920 3300048904 Bacteria 3759
129 Ga0496102_0002966 3300048905 Bacteria 14371
130 Ga0496102_0006928 3300048905 Bacteria 9670
131 Ga0496102_0021720 3300048905 Bacteria 5679
132 Ga0496102_0025322 3300048905 Bacteria 5281
133 Ga0496105_0013742 3300048908 Bacteria 6428
134 Ga0496107_0006668 3300048910 Bacteria 7947
135 Ga0496108_0001910 3300048911 Bacteria 16663
136 Ga0496108_0033635 3300048911 Bacteria 4258
137 Ga0496109_0001848 3300048912 Bacteria 17542
138 Ga0496109_0053190 3300048912 Bacteria 3692
139 Ga0496110_0000438 3300048913 Bacteria 28365
140 Ga0496111_0000246 3300048914 Bacteria 26045
141 Ga0496114_0022245 3300048917 Bacteria 5165
142 Ga0496114_0054773 3300048917 Bacteria 3325
143 Ga0496115_0001052 3300048918 Bacteria 20018
144 Ga0496115_0079166 3300048918 Bacteria 2675
145 Ga0496121_0008851 3300048924 Bacteria 11725
146 Ga0496124_0152365 3300048927 Bacteria 1812
147 Ga0501032_0080417 3300049569 Bacteria 2169
148 Ga0501034_0156757 3300049571 Bacteria 2250
149 Ga0501036_0006136 3300049572 Bacteria 9750
150 Ga0501036_0213752 3300049572 Bacteria 1620
151 Ga0501038_0010937 3300049574 Bacteria 8290
152 Ga0501039_0015347 3300049575 Bacteria 5864
153 Ga0501039_0020916 3300049575 Bacteria 5017
154 Ga0501040_0007205 3300049576 Bacteria 7201
155 Ga0501041_0011564 3300049577 Bacteria 5220
156 Ga0501042_0044985 3300049578 Bacteria 3146
157 Ga0501043_0160332 3300049579 Bacteria 1758
158 Ga0501047_0031462 3300049581 Bacteria 5118
159 Ga0501048_0013523 3300049582 Bacteria 6056
160 Ga0501067_0001160 3300049583 Bacteria 14313
161 Ga0501068_0026407 3300049584 Bacteria 3421
162 Ga0501068_0039730 3300049584 Bacteria 2822
163 Ga0501068_0042504 3300049584 Bacteria 2733
164 Ga0501069_0016109 3300049585 Bacteria 4010
165 Ga0501069_0030687 3300049585 Bacteria 2953
166 Ga0501069_0055363 3300049585 Bacteria 2210
167 Ga0501070_0007836 3300049586 Bacteria 9051
168 Ga0501070_0008197 3300049586 Bacteria 8836
169 Ga0501070_0074833 3300049586 Bacteria 2803
170 Ga0501071_0021394 3300049587 Bacteria 4503
171 Ga0501072_0022964 3300049588 Bacteria 4842
172 Ga0501073_0006673 3300049589 Bacteria 8593
173 Ga0501073_0016694 3300049589 Bacteria 5319
174 Ga0501074_0004980 3300049590 Bacteria 9528
175 Ga0501074_0006712 3300049590 Bacteria 8303
176 Ga0501076_0010264 3300049592 Bacteria 6942
177 Ga0501076_0098955 3300049592 Bacteria 2350
178 Ga0501077_0085012 3300049593 Bacteria 2005
179 Ga0501079_0085218 3300049741 Bacteria 2445
180 Ga0501080_0009471 3300049742 Bacteria 8883
181 Ga0501080_0024811 3300049742 Bacteria 5561
182 Ga0501081_0056769 3300049743 Bacteria 2706
183 Ga0501083_0011449 3300049744 Bacteria 6222
184 Ga0501035_0058207 3300049822 Bacteria 3445
185 Ga0501045_0008344 3300049824 Bacteria 7216
186 nmdc:mga03n38_1279_c1 3300050490 Bacteria 7077
187 nmdc:mga03n38_34459_c1 3300050490 Bacteria 2163
188 nmdc:mga00v17_2610_c1 3300050491 Bacteria 9242
189 nmdc:mga00v17_28301_c1 3300050491 Bacteria 3281
190 nmdc:mga0yw44_15176_c1 3300050492 Bacteria 4117
191 nmdc:mga0yw44_18854_c1 3300050492 Bacteria 3790
192 nmdc:mga0yw44_43105_c1 3300050492 Bacteria 2692
193 nmdc:mga0yw44_7948_c1 3300050492 Bacteria 5256
194 nmdc:mga06z11_16060_c2 3300050494 Bacteria 2831
195 nmdc:mga06z11_33898_c1 3300050494 Bacteria 2502
196 nmdc:mga06z11_56041_c1 3300050494 Bacteria 2037
197 nmdc:mga07m45_20033_c1 3300050496 Bacteria 3630
198 nmdc:mga05p37_36012_c1 3300050507 Bacteria 6072
199 nmdc:mga05p37_6169_c1 3300050507 Bacteria 14111
200 nmdc:mga09592_22772_c1 3300050508 Bacteria 5170
201 nmdc:mga0qj67_25612_c1 3300050509 Bacteria 4559
202 nmdc:mga0qj67_69553_c1 3300050509 Bacteria 2808
203 nmdc:mga06r32_6031_c1 3300050510 Bacteria 10902
204 nmdc:mga08y16_188408_c1 3300050511 Bacteria 2140
205 nmdc:mga08y16_219919_c1 3300050511 Bacteria 1966
206 nmdc:mga0rr50_217115_c1 3300050513 Bacteria 1578
207 nmdc:mga08x19_41781_c1 3300050514 Bacteria 2920
208 nmdc:mga0a205_150987_c1 3300050515 Bacteria 2223
209 Ga0495619_0028579 3300053085 Bacteria 3598
210 Ga0500643_000483 3300053087 Bacteria 29043
211 Ga0500644_0000104 3300053088 Bacteria 53398
212 Ga0500593_000066 3300053117 Bacteria 38736
213 Ga0501084_0003006 3300054114 Bacteria 13661
214 Ga0501084_0050301 3300054114 Bacteria 3488
215 Ga0501082_0024831 3300060353 Bacteria 5165
216 Ga0501082_0129334 3300060353 Bacteria 2191
217 Ga0501082_0143324 3300060353 Bacteria 2073
218 Ga0530510_0051963 3300061734 Bacteria 2961
219 2644093134 2643221615 Bacteria 5487866
220 2644229659 2643221641 Bacteria 4490190
221 2644322745 2643221657 Bacteria 5490246
222 2740168312 2739367898 Bacteria 4367674
223 2857484836 2857481737 Bacteria 4761446
224 2917741314 2917736166 Bacteria 9690793
225 8054614285 8054609563 Bacteria 5170090
226 Ga0496103_0013923
227 JGI24735J21928_10012939
228 JGI25406J46586_10028327
229 rootL2_10047026
230 Ga0070658_10005154
231 Ga0070658_10006407
232 Ga0070658_10067680
233 Ga0070683_100000595
234 Ga0070683_100006572
235 Ga0070682_100004727
236 Ga0070668_100002088
237 Ga0070667_100108124
238 Ga0070684_100000974
239 Ga0070665_100010276
240 Ga0070664_100127734
241 Ga0068857_100019761
242 Ga0068864_100033828
243 Ga0068861_100159634
244 Ga0068860_100003178
245 Ga0068860_100135146
246 Ga0081455_10008117
247 Ga0081455_10045196
248 Ga0081455_10118372
249 Ga0081539_10000015
250 Ga0081539_10000362
251 Ga0081539_10008025
252 Ga0081539_10052531
253 Ga0075365_10006841
254 Ga0075365_10007449
255 Ga0075365_10044969
256 Ga0075365_10074571
257 Ga0075368_10000043
258 Ga0075368_10018026
259 Ga0075363_100003991
260 Ga0075363_100006037
261 Ga0075363_100017067
262 Ga0075364_10059681
263 Ga0075362_10035683
264 Ga0075367_10017387
265 Ga0075367_10052787
266 Ga0075370_10011164
267 Ga0075428_100011787
268 Ga0075430_100002550
269 Ga0075430_100030995
270 Ga0075431_100002750
271 Ga0075433_10066522
272 Ga0075434_100154013
273 Ga0075429_100007467
274 Ga0075429_100073532
275 Ga0075435_100004060
276 Ga0111539_10210432
277 Ga0111539_10228442
278 Ga0114129_10002093
279 Ga0114129_10004135
280 Ga0105243_10003944
281 Ga0105242_10008402
282 Ga0105248_10067837
283 Ga0105239_10001253
284 Ga0105246_10004009
285 Ga0157372_10003008
286 Ga0157375_10020640
287 Ga0157375_10074307
288 Ga0163163_10238423
289 Ga0163163_10274591
290 Ga0157379_10004243
291 Ga0207688_10006289
292 Ga0207647_10011271
293 Ga0207647_10019396
294 Ga0207705_10043819
295 Ga0207705_10071321
296 Ga0207705_10083058
297 Ga0207687_10084580
298 Ga0207690_10021621
299 Ga0207709_10028465
300 Ga0207709_10050588
301 Ga0207711_10052648
302 Ga0207661_10002542
303 Ga0207661_10006484
304 Ga0207668_10006741
305 Ga0207668_10079776
306 Ga0207640_10039820
307 Ga0207658_10020758
308 Ga0207708_10058464
309 Ga0207676_10087604
310 Ga0207674_10025492
311 Ga0207675_100009144
312 Ga0207675_100053880
313 Ga0207683_10030078
314 Ga0207428_10001674
315 Ga0268266_10000509
316 Ga0268264_10000193
317 Ga0307508_10002658
318 Ga0316576_10049287
319 Ga0307405_10093649
320 Ga0307410_10043056
321 Ga0326468_10000266
322 Ga0307409_100002523
323 Ga0307409_100003817
324 Ga0307409_100073744
325 Ga0307409_100130127
326 Ga0307416_100095511
327 Ga0307411_10057363
328 Ga0307415_100000142
329 Ga0307415_100042298
330 Ga0307507_10025428
331 Ga0307510_10047878
332 Ga0373938_0001873
333 Ga0373940_0000286
334 Ga0373942_0000185
335 Ga0316574_0001260
336 Ga0316584_0147549
337 Ga0395901_0006072
338 Ga0439448_0012649
339 Ga0439450_005497
340 Ga0439460_0017271
341 Ga0466972_0019323
342 Ga0466964_0014063
343 Ga0466970_0004651
344 Ga0466960_0002015
345 Ga0466960_0006245
346 Ga0466960_0009859
347 Ga0466967_0014343
348 Ga0466967_0027920
349 Ga0466967_0034639
350 Ga0466967_0089217
351 Ga0495657_0083783
352 Ga0495669_0011615
353 Ga0496101_0030920
354 Ga0496102_0002966
355 Ga0496102_0006928
356 Ga0496102_0021720
357 Ga0496102_0025322
358 Ga0496105_0013742
359 Ga0496107_0006668
360 Ga0496108_0001910
361 Ga0496108_0033635
362 Ga0496109_0001848
363 Ga0496109_0053190
364 Ga0496110_0000438
365 Ga0496111_0000246
366 Ga0496114_0022245
367 Ga0496114_0054773
368 Ga0496115_0001052
369 Ga0496115_0079166
370 Ga0496121_0008851
371 Ga0496124_0152365
372 Ga0501032_0080417
373 Ga0501034_0156757
374 Ga0501036_0006136
375 Ga0501036_0213752
376 Ga0501038_0010937
377 Ga0501039_0015347
378 Ga0501039_0020916
379 Ga0501040_0007205
380 Ga0501041_0011564
381 Ga0501042_0044985
382 Ga0501043_0160332
383 Ga0501047_0031462
384 Ga0501048_0013523
385 Ga0501067_0001160
386 Ga0501068_0026407
387 Ga0501068_0039730
388 Ga0501068_0042504
389 Ga0501069_0016109
390 Ga0501069_0030687
391 Ga0501069_0055363
392 Ga0501070_0007836
393 Ga0501070_0008197
394 Ga0501070_0074833
395 Ga0501071_0021394
396 Ga0501072_0022964
397 Ga0501073_0006673
398 Ga0501073_0016694
399 Ga0501074_0004980
400 Ga0501074_0006712
401 Ga0501076_0010264
402 Ga0501076_0098955
403 Ga0501077_0085012
404 Ga0501079_0085218
405 Ga0501080_0009471
406 Ga0501080_0024811
407 Ga0501081_0056769
408 Ga0501083_0011449
409 Ga0501035_0058207
410 Ga0501045_0008344
411 nmdc:mga03n38_1279_c1
412 nmdc:mga03n38_34459_c1
413 nmdc:mga00v17_2610_c1
414 nmdc:mga00v17_28301_c1
415 nmdc:mga0yw44_15176_c1
416 nmdc:mga0yw44_18854_c1
417 nmdc:mga0yw44_43105_c1
418 nmdc:mga0yw44_7948_c1
419 nmdc:mga06z11_16060_c2
420 nmdc:mga06z11_33898_c1
421 nmdc:mga06z11_56041_c1
422 nmdc:mga07m45_20033_c1
423 nmdc:mga05p37_36012_c1
424 nmdc:mga05p37_6169_c1
425 nmdc:mga09592_22772_c1
426 nmdc:mga0qj67_25612_c1
427 nmdc:mga0qj67_69553_c1
428 nmdc:mga06r32_6031_c1
429 nmdc:mga08y16_188408_c1
430 nmdc:mga08y16_219919_c1
431 nmdc:mga0rr50_217115_c1
432 nmdc:mga08x19_41781_c1
433 nmdc:mga0a205_150987_c1
434 Ga0495619_0028579
435 Ga0500643_000483
436 Ga0500644_0000104
437 Ga0500593_000066
438 Ga0501084_0003006
439 Ga0501084_0050301
440 Ga0501082_0024831
441 Ga0501082_0129334
442 Ga0501082_0143324
443 Ga0530510_0051963
444 2644093134
445 2644229659
446 2644322745
447 2740168312
448 2857484836
449 2917741314
450 8054614285

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05768

Glrx-like

Glutaredoxin-like domain (DUF836)

520

594

0.98

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

427

495

0.92

PF00501

AMP-binding

AMP-binding enzyme

10

389

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u5y-assembly1.cif.gz_D crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.91 417 500
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.8906 3 414
3t5c-assembly2.cif.gz_B crystal structure of n-terminal domain of facl13 from mycobacterium tuberculosis in different space group c2 0.8812 4 410
3o84-assembly1.cif.gz_A structure of base n-terminal domain from acinetobacter baumannii bound to 6-phenyl-1-(pyridin-4-ylmethyl)-1h-pyrazolo[3,4-b]pyridine-4-carboxylic acid. 0.8795 3 406
3u16-assembly2.cif.gz_B structure of base n-terminal domain from acinetobacter baumannii bound to 6-(p-benzyloxy)phenyl-1-(pyridin-4-ylmethyl)-1h-pyrazolo[3,4-b]pyridine-4-carboxylic acid. 0.8774 3 406
ID Description Score Start End Superfamily
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9595 417 499 3.30.300.30
af_Q9LQS1_441_544_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9442 417 501 3.30.300.30
af_P38137_433_538_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9397 416 507 3.30.300.30
af_I1LI90_433_534_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.939 417 502 3.30.300.30
af_Q2G294_455_568_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9379 416 503 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A0S8JBR2-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.9555 416 503 GO:0016878
GO:0044550
GO:0046417
AF-A0A482RQG2-F1-model_v4 deleted 0.9465 29 122
AF-A0A380BDY4-F1-model_v4 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.9461 431 499 GO:0004467
GO:0044550
AF-A0A2M4CGV4-F1-model_v4 Medium-chain acyl-CoA ligase ACSF2, mitochondrial 0.9429 1 108 GO:0006631
GO:0031956
AF-A0A317K1Y5-F1-model_v4 Non-ribosomal peptide synthetase 0.937 4 108 GO:0005829
GO:0008610
GO:0009239
GO:0009366
GO:0031177
GO:0043041
GO:0047527

Map