F338146

General Info

Members Datasets Scaffolds Average Seq Length
225 166 225 193

Family's Representative Sequence

Representative Sequence 3300047315|Ga0495581_0178910|Ga0495581_0178910_79_699
Length 206
Sequence MGKSRLEAFSDGVIAIIITIMVLELRAPHSDATLHALRPLLPRFISYVLSFIYIGIYWNNHHHLMHATQRVSGPVLWANMHLLFWLSLVPFTTDWMGESGFAAVPVATYGVILLLAGIAFWILTHALIRLHGPDSILARAVGNDRKGKASVLIYALGVLSVLINPWAGFAVYAIVAMIWFIPDRRIARRLAHERAVPAHHDAPPSS

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
86 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
87 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
88 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
89 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
90 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
91 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
99 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
100 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
101 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
102 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
103 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
104 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
105 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
106 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
107 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
108 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
116 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
117 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
121 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
122 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
127 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
128 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
129 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
130 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
131 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
132 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
133 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
149 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
153 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
154 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
159 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
160 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
161 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
164 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
165 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.33
Nodule 0
Rhizoplane 3.11
Rhizosphere 93.33
Stem 0
Stem Tuber 0
Unclassified 2.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10530509 3300005293 Bacteria 756
2 Ga0070683_100482541 3300005329 Bacteria 1184
3 Ga0070690_100050763 3300005330 Bacteria 2646
4 Ga0070670_100146145 3300005331 Bacteria 2046
5 Ga0070689_100000005 3300005340 Bacteria 396551
6 Ga0070689_100580416 3300005340 Bacteria 969
7 Ga0070668_100812660 3300005347 Bacteria 831
8 Ga0070688_100891787 3300005365 Bacteria 701
9 Ga0070709_10127267 3300005434 Bacteria 1734
10 Ga0070710_10447443 3300005437 Bacteria 875
11 Ga0070708_100457001 3300005445 Bacteria 1205
12 Ga0070681_10016093 3300005458 Bacteria 7455
13 Ga0070685_10151292 3300005466 Bacteria 1471
14 Ga0070685_10173791 3300005466 Bacteria 1382
15 Ga0070698_100258878 3300005471 Bacteria 1672
16 Ga0070699_100384305 3300005518 Bacteria 1268
17 Ga0070679_100569709 3300005530 Bacteria 1076
18 Ga0070684_100035825 3300005535 Bacteria 4250
19 Ga0070697_100107570 3300005536 Bacteria 2320
20 Ga0070697_100888109 3300005536 Bacteria 790
21 Ga0070686_100222224 3300005544 Bacteria 1365
22 Ga0070665_100000422 3300005548 Bacteria 61821
23 Ga0068857_100291806 3300005577 Bacteria 1502
24 Ga0068856_101209542 3300005614 Bacteria 772
25 Ga0068859_101448905 3300005617 Bacteria 758
26 Ga0068863_100289397 3300005841 Bacteria 1588
27 Ga0068860_100107434 3300005843 Bacteria 2667
28 Ga0068862_100599914 3300005844 Bacteria 1057
29 Ga0081455_10020438 3300005937 Bacteria 6234
30 Ga0081539_10025263 3300005985 Bacteria 3831
31 Ga0070717_10405497 3300006028 Bacteria 1225
32 Ga0070717_10447801 3300006028 Bacteria 1163
33 Ga0075364_10317842 3300006051 Bacteria 1060
34 Ga0070712_100126566 3300006175 Bacteria 1930
35 Ga0075428_100116811 3300006844 Bacteria 2906
36 Ga0075433_10004571 3300006852 Bacteria 10795
37 Ga0075433_10114395 3300006852 Bacteria 2394
38 Ga0075433_10205338 3300006852 Bacteria 1751
39 Ga0075434_100000051 3300006871 Bacteria 57214
40 Ga0075434_100012056 3300006871 Bacteria 8182
41 Ga0075434_100437787 3300006871 Bacteria 1328
42 Ga0075436_100001049 3300006914 Bacteria 18662
43 Ga0075436_100001089 3300006914 Bacteria 18302
44 Ga0075436_100060691 3300006914 Bacteria 2612
45 Ga0075436_100156423 3300006914 Bacteria 1606
46 Ga0075436_100327956 3300006914 Bacteria 1100
47 Ga0075436_100441046 3300006914 Bacteria 947
48 Ga0097620_101449008 3300006931 Bacteria 758
49 Ga0075435_100000006 3300007076 Bacteria 119843
50 Ga0075435_100021934 3300007076 Bacteria 4922
51 Ga0075435_100158992 3300007076 Bacteria 1902
52 Ga0105240_10004990 3300009093 Bacteria 19934
53 Ga0105240_10436485 3300009093 Bacteria 1468
54 Ga0111539_10134395 3300009094 Bacteria 2896
55 Ga0105245_10051194 3300009098 Bacteria 3702
56 Ga0105245_10790995 3300009098 Bacteria 986
57 Ga0114129_10582265 3300009147 Bacteria 1452
58 Ga0105241_10912390 3300009174 Bacteria 816
59 Ga0105248_10184301 3300009177 Bacteria 2352
60 Ga0105237_10083815 3300009545 Bacteria 3178
61 Ga0105237_10253214 3300009545 Bacteria 1763
62 Ga0105238_10000426 3300009551 Bacteria 44433
63 Ga0105249_10809653 3300009553 Bacteria 1001
64 Ga0157373_10182447 3300013100 Bacteria 1478
65 Ga0157369_11134187 3300013105 Bacteria 799
66 Ga0157374_10000190 3300013296 Bacteria 56853
67 Ga0157374_11409959 3300013296 Bacteria 719
68 Ga0163162_11747701 3300013306 Bacteria 711
69 Ga0163162_11915811 3300013306 Bacteria 679
70 Ga0157372_10023359 3300013307 Bacteria 6702
71 Ga0157372_10298036 3300013307 Bacteria 1875
72 Ga0157372_11003684 3300013307 Bacteria 967
73 Ga0157375_10827131 3300013308 Bacteria 1074
74 Ga0163163_11826429 3300014325 Bacteria 668
75 Ga0157376_10051036 3300014969 Bacteria 3435
76 Ga0157376_11081497 3300014969 Bacteria 827
77 Ga0163161_10123663 3300017792 Bacteria 1946
78 Ga0163161_11160919 3300017792 Bacteria 666
79 Ga0213872_10002034 3300021361 Bacteria 12290
80 Ga0213871_10020972 3300021441 Bacteria 1625
81 Ga0207707_10001135 3300025912 Bacteria 25236
82 Ga0207707_10010065 3300025912 Bacteria 8202
83 Ga0207695_10323280 3300025913 Bacteria 1432
84 Ga0207695_10572654 3300025913 Bacteria 1011
85 Ga0207671_10393859 3300025914 Bacteria 1101
86 Ga0207671_10631559 3300025914 Bacteria 853
87 Ga0207652_10235441 3300025921 Bacteria 1650
88 Ga0207650_10173360 3300025925 Bacteria 1715
89 Ga0207687_10056768 3300025927 Bacteria 2747
90 Ga0207700_10537695 3300025928 Bacteria 1036
91 Ga0207644_10537887 3300025931 Bacteria 966
92 Ga0207670_10000004 3300025936 Bacteria 707262
93 Ga0207665_10185370 3300025939 Bacteria 1509
94 Ga0207711_10031456 3300025941 Bacteria 4480
95 Ga0207667_10222947 3300025949 Bacteria 1932
96 Ga0207712_10657629 3300025961 Bacteria 911
97 Ga0207712_10999215 3300025961 Bacteria 742
98 Ga0207708_10082998 3300026075 Bacteria 2463
99 Ga0207641_10051508 3300026088 Bacteria 3487
100 Ga0207674_10318368 3300026116 Bacteria 1505
101 Ga0207683_10408022 3300026121 Bacteria 1250
102 Ga0209971_1014456 3300027682 Bacteria 1871
103 Ga0209974_10001176 3300027876 Bacteria 9338
104 Ga0265355_1007543 3300028036 Bacteria 862
105 Ga0268266_10443759 3300028379 Bacteria 1233
106 Ga0268265_10582324 3300028380 Bacteria 1067
107 Ga0268264_10144486 3300028381 Bacteria 2125
108 Ga0265338_10269319 3300028800 Bacteria 1249
109 Ga0265328_10015237 3300031239 Bacteria 3016
110 Ga0265316_10124368 3300031344 Bacteria 1946
111 Ga0307509_10333698 3300031507 Bacteria 1247
112 Ga0307408_100004437 3300031548 Bacteria 9526
113 Ga0307408_100026087 3300031548 Bacteria 4008
114 Ga0307408_100453236 3300031548 Bacteria 1113
115 Ga0307406_10773136 3300031901 Bacteria 808
116 Ga0307416_100189950 3300032002 Bacteria 1936
117 Ga0373936_0212609 3300035113 Bacteria 856
118 Ga0373953_0014938 3300035117 Bacteria 2802
119 Ga0373956_0015609 3300035119 Bacteria 3183
120 Ga0373955_0085489 3300035172 Bacteria 1790
121 Ga0373955_0254798 3300035172 Bacteria 1053
122 Ga0373924_0309860 3300035410 Bacteria 701
123 Ga0373933_0005830 3300035724 Bacteria 6699
124 Ga0373947_0043012 3300035725 Bacteria 2697
125 Ga0373937_0101338 3300036401 Bacteria 2672
126 Ga0373925_0132434 3300037068 Bacteria 1945
127 Ga0373925_1035465 3300037068 Bacteria 676
128 Ga0395905_0000003 3300037471 Bacteria 1347396
129 Ga0436365_0148499 3300039437 Bacteria 3117
130 Ga0436365_0578592 3300039437 Bacteria 1425
131 Ga0436360_0689178 3300039438 Bacteria 2012
132 Ga0436360_1088030 3300039438 Unclassified 997
133 Ga0436361_0882074 3300039447 Bacteria 7849
134 Ga0436361_0944950 3300039447 Bacteria 1019
135 Ga0436363_1075948 3300039450 Bacteria 4076
136 Ga0436362_0177798 3300039453 Bacteria 3146
137 Ga0439439_0007661 3300041406 Bacteria 2530
138 Ga0451798_0095075 3300041458 Bacteria 769
139 Ga0451849_0276884 3300041505 Bacteria 614
140 Ga0439448_0249903 3300042005 Bacteria 626
141 Ga0439457_076469 3300042014 Bacteria 767
142 Ga0439446_0021685 3300042156 Bacteria 1817
143 Ga0439434_0070347 3300042435 Bacteria 1101
144 Ga0451577_0339933 3300042876 Bacteria 1361
145 Ga0466963_0021421 3300044694 Bacteria 4078
146 Ga0453684_0007672 3300044712 Bacteria 19730
147 Ga0453684_0104225 3300044712 Bacteria 3463
148 Ga0451576_0110137 3300045051 Bacteria 2866
149 Ga0451576_0214013 3300045051 Bacteria 2013
150 Ga0451576_0236618 3300045051 Bacteria 1907
151 Ga0495603_0111492 3300046455 Bacteria 1596
152 Ga0495629_0385136 3300046459 Bacteria 954
153 Ga0495651_0000107 3300046462 Bacteria 61202
154 Ga0495653_0372311 3300046463 Bacteria 914
155 Ga0495580_0018314 3300046472 Bacteria 5215
156 Ga0495639_0019879 3300046475 Bacteria 2932
157 Ga0495608_0604043 3300046511 Bacteria 658
158 Ga0495628_0068574 3300046516 Bacteria 2767
159 Ga0495630_0002128 3300046517 Bacteria 13772
160 Ga0495665_0349255 3300046531 Bacteria 753
161 Ga0495640_0413922 3300046533 Bacteria 826
162 Ga0495645_0028857 3300046543 Bacteria 4032
163 Ga0495667_0001432 3300046559 Bacteria 15715
164 Ga0495667_0294809 3300046559 Bacteria 1028
165 Ga0495657_0193005 3300046675 Bacteria 1244
166 Ga0495624_0010175 3300046690 Bacteria 6486
167 Ga0495600_0341203 3300046809 Unclassified 939
168 Ga0495581_0178910 3300047315 Bacteria 1240
169 Ga0495581_0229788 3300047315 Bacteria 1085
170 Ga0495674_0263325 3300047319 Bacteria 1416
171 Ga0495676_0052368 3300047321 Bacteria 3259
172 Ga0495680_0001758 3300047322 Bacteria 22952
173 Ga0495684_0002958 3300047471 Bacteria 13376
174 Ga0495684_0436245 3300047471 Bacteria 913
175 Ga0496101_0633909 3300048904 Bacteria 845
176 Ga0496104_0949561 3300048907 Bacteria 764
177 Ga0496105_0592290 3300048908 Bacteria 861
178 Ga0496112_0127744 3300048915 Bacteria 2513
179 Ga0496114_0170788 3300048917 Bacteria 1895
180 Ga0496115_0297047 3300048918 Bacteria 1324
181 Ga0501031_0017449 3300049568 Bacteria 4665
182 Ga0501036_0010449 3300049572 Bacteria 7666
183 Ga0501037_0006723 3300049573 Bacteria 8416
184 Ga0501038_0015927 3300049574 Bacteria 6832
185 Ga0501039_0018165 3300049575 Bacteria 5397
186 Ga0501039_0862493 3300049575 Bacteria 705
187 Ga0501043_0024251 3300049579 Bacteria 4760
188 Ga0501046_0063894 3300049580 Bacteria 2874
189 Ga0501047_0039875 3300049581 Bacteria 4542
190 Ga0501047_0480685 3300049581 Unclassified 1070
191 Ga0501069_0000151 3300049585 Bacteria 31227
192 Ga0501070_0002083 3300049586 Bacteria 17572
193 Ga0501073_0002668 3300049589 Bacteria 13360
194 Ga0501073_0129658 3300049589 Unclassified 1748
195 Ga0501073_0161213 3300049589 Bacteria 1554
196 Ga0501074_0009722 3300049590 Bacteria 6983
197 Ga0501225_0150224 3300049705 Bacteria 710
198 Ga0501079_0006795 3300049741 Bacteria 8611
199 Ga0501079_0913906 3300049741 Bacteria 691
200 Ga0501080_0007828 3300049742 Bacteria 9666
201 Ga0501080_0016910 3300049742 Bacteria 6737
202 Ga0501080_0146767 3300049742 Unclassified 2181
203 Ga0501083_0000992 3300049744 Bacteria 18864
204 Ga0501083_0012850 3300049744 Bacteria 5855
205 Ga0501044_0053526 3300049823 Bacteria 4152
206 Ga0501044_0091364 3300049823 Bacteria 3071
207 nmdc:mga00v17_267307_c1 3300050491 Bacteria 1110
208 nmdc:mga08y16_463876_c1 3300050511 Bacteria 1290
209 nmdc:mga0n895_31552_c1 3300050512 Bacteria 5074
210 nmdc:mga0n895_52_c1 3300050512 Bacteria 69311
211 nmdc:mga0n895_77465_c1 3300050512 Bacteria 3308
212 nmdc:mga0rr50_15_c1 3300050513 Bacteria 189079
213 nmdc:mga0rr50_391107_c1 3300050513 Bacteria 1173
214 nmdc:mga0rr50_953371_c1 3300050513 Bacteria 731
215 nmdc:mga08x19_118688_c1 3300050514 Bacteria 1771
216 nmdc:mga08x19_576094_c1 3300050514 Bacteria 797
217 nmdc:mga08x19_609_c1 3300050514 Bacteria 23121
218 nmdc:mga08x19_9343_c1 3300050514 Bacteria 5868
219 nmdc:mga0a205_224_c2 3300050515 Bacteria 15077
220 nmdc:mga0a205_448335_c1 3300050515 Bacteria 1151
221 nmdc:mga0a205_87750_c1 3300050515 Bacteria 3005
222 Ga0495601_0008082 3300053077 Bacteria 6202
223 Ga0495612_0047772 3300053078 Bacteria 1754
224 Ga0500566_0082336 3300053094 Bacteria 1789
225 Ga0530510_0107538 3300061734 Bacteria 2041

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300041458 Ga0451798_0095075 Ga0451798_0095075_16_525 169
2 3300013100 Ga0157373_10182447 Ga0157373_101824471 177
3 3300013105 Ga0157369_11134187 Ga0157369_111341871 177
4 3300013307 Ga0157372_11003684 Ga0157372_110036841 177
5 3300025949 Ga0207667_10222947 Ga0207667_102229472 177
6 3300042005 Ga0439448_0249903 Ga0439448_0249903_13_606 177
7 3300037068 Ga0373925_1035465 Ga0373925_1035465_22_576 184
8 3300005548 Ga0070665_100000422 Ga0070665_10000042240 185
9 3300005841 Ga0068863_100289397 Ga0068863_1002893971 185
10 3300026088 Ga0207641_10051508 Ga0207641_100515082 185
11 3300049568 Ga0501031_0017449 Ga0501031_0017449_2438_3016 185
12 3300049572 Ga0501036_0010449 Ga0501036_0010449_4142_4720 185
13 3300049573 Ga0501037_0006723 Ga0501037_0006723_1800_2378 185
14 3300049574 Ga0501038_0015927 Ga0501038_0015927_2863_3441 185
15 3300049575 Ga0501039_0018165 Ga0501039_0018165_1173_1751 185
16 3300049579 Ga0501043_0024251 Ga0501043_0024251_1171_1749 185
17 3300049580 Ga0501046_0063894 Ga0501046_0063894_491_1069 185
18 3300049581 Ga0501047_0480685 Ga0501047_0480685_92_670 185
19 3300049589 Ga0501073_0129658 Ga0501073_0129658_688_1266 185
20 3300049742 Ga0501080_0146767 Ga0501080_0146767_1353_1931 185
21 3300049823 Ga0501044_0053526 Ga0501044_0053526_2513_3091 185
22 3300031239 Ga0265328_10015237 Ga0265328_100152373 187
23 3300028036 Ga0265355_1007543 Ga0265355_10075432 188
24 3300005544 Ga0070686_100222224 Ga0070686_1002222242 189
25 3300006028 Ga0070717_10405497 Ga0070717_104054971 189
26 3300026075 Ga0207708_10082998 Ga0207708_100829982 189
27 3300031344 Ga0265316_10124368 Ga0265316_101243681 189
28 3300041505 Ga0451849_0276884 Ga0451849_0276884_23_592 189
29 3300046462 Ga0495651_0000107 Ga0495651_0000107_15885_16454 189
30 3300046543 Ga0495645_0028857 Ga0495645_0028857_1543_2112 189
31 3300046559 Ga0495667_0001432 Ga0495667_0001432_6848_7417 189
32 3300046809 Ga0495600_0341203 Ga0495600_0341203_82_651 189
33 3300047322 Ga0495680_0001758 Ga0495680_0001758_10220_10789 189
34 3300006914 Ga0075436_100060691 Ga0075436_1000606913 190
35 3300006914 Ga0075436_100156423 Ga0075436_1001564232 190
36 3300014325 Ga0163163_11826429 Ga0163163_118264291 190
37 3300035117 Ga0373953_0014938 Ga0373953_0014938_1849_2421 190
38 3300035119 Ga0373956_0015609 Ga0373956_0015609_659_1231 190
39 3300035172 Ga0373955_0085489 Ga0373955_0085489_129_701 190
40 3300035724 Ga0373933_0005830 Ga0373933_0005830_44_616 190
41 3300036401 Ga0373937_0101338 Ga0373937_0101338_1404_1976 190
42 3300037068 Ga0373925_0132434 Ga0373925_0132434_217_789 190
43 3300044712 Ga0453684_0104225 Ga0453684_0104225_654_1256 190
44 3300045051 Ga0451576_0214013 Ga0451576_0214013_425_1027 190
45 3300046511 Ga0495608_0604043 Ga0495608_0604043_10_582 190
46 3300046533 Ga0495640_0413922 Ga0495640_0413922_32_604 190
47 3300046559 Ga0495667_0294809 Ga0495667_0294809_419_991 190
48 3300046675 Ga0495657_0193005 Ga0495657_0193005_285_857 190
49 3300047471 Ga0495684_0436245 Ga0495684_0436245_72_644 190
50 3300050514 nmdc:mga08x19_118688_c1 nmdc:mga08x19_118688_c1_366_938 190
51 3300005329 Ga0070683_100482541 Ga0070683_1004825412 191
52 3300005331 Ga0070670_100146145 Ga0070670_1001461452 191
53 3300005340 Ga0070689_100580416 Ga0070689_1005804162 191
54 3300005347 Ga0070668_100812660 Ga0070668_1008126602 191
55 3300005365 Ga0070688_100891787 Ga0070688_1008917871 191
56 3300005434 Ga0070709_10127267 Ga0070709_101272672 191
57 3300005437 Ga0070710_10447443 Ga0070710_104474431 191
58 3300005458 Ga0070681_10016093 Ga0070681_100160934 191
59 3300005466 Ga0070685_10151292 Ga0070685_101512922 191
60 3300005530 Ga0070679_100569709 Ga0070679_1005697092 191
61 3300005536 Ga0070697_100107570 Ga0070697_1001075702 191
62 3300005577 Ga0068857_100291806 Ga0068857_1002918061 191
63 3300005614 Ga0068856_101209542 Ga0068856_1012095421 191
64 3300005617 Ga0068859_101448905 Ga0068859_1014489051 191
65 3300005844 Ga0068862_100599914 Ga0068862_1005999142 191
66 3300005937 Ga0081455_10020438 Ga0081455_100204383 191
67 3300005985 Ga0081539_10025263 Ga0081539_100252632 191
68 3300006028 Ga0070717_10447801 Ga0070717_104478011 191
69 3300006051 Ga0075364_10317842 Ga0075364_103178422 191
70 3300006175 Ga0070712_100126566 Ga0070712_1001265662 191
71 3300006852 Ga0075433_10004571 Ga0075433_100045717 191
72 3300006852 Ga0075433_10114395 Ga0075433_101143951 191
73 3300006852 Ga0075433_10205338 Ga0075433_102053382 191
74 3300006871 Ga0075434_100437787 Ga0075434_1004377872 191
75 3300006914 Ga0075436_100441046 Ga0075436_1004410462 191
76 3300006931 Ga0097620_101449008 Ga0097620_1014490081 191
77 3300009093 Ga0105240_10004990 Ga0105240_100049905 191
78 3300009094 Ga0111539_10134395 Ga0111539_101343952 191
79 3300009098 Ga0105245_10051194 Ga0105245_100511944 191
80 3300009098 Ga0105245_10790995 Ga0105245_107909951 191
81 3300009147 Ga0114129_10582265 Ga0114129_105822651 191
82 3300009174 Ga0105241_10912390 Ga0105241_109123901 191
83 3300009545 Ga0105237_10253214 Ga0105237_102532142 191
84 3300009553 Ga0105249_10809653 Ga0105249_108096532 191
85 3300013296 Ga0157374_11409959 Ga0157374_114099592 191
86 3300013307 Ga0157372_10023359 Ga0157372_100233592 191
87 3300013308 Ga0157375_10827131 Ga0157375_108271312 191
88 3300021361 Ga0213872_10002034 Ga0213872_100020343 191
89 3300021441 Ga0213871_10020972 Ga0213871_100209722 191
90 3300025912 Ga0207707_10010065 Ga0207707_100100657 191
91 3300025913 Ga0207695_10323280 Ga0207695_103232802 191
92 3300025921 Ga0207652_10235441 Ga0207652_102354412 191
93 3300025925 Ga0207650_10173360 Ga0207650_101733602 191
94 3300025927 Ga0207687_10056768 Ga0207687_100567682 191
95 3300025928 Ga0207700_10537695 Ga0207700_105376952 191
96 3300025939 Ga0207665_10185370 Ga0207665_101853702 191
97 3300026116 Ga0207674_10318368 Ga0207674_103183682 191
98 3300026121 Ga0207683_10408022 Ga0207683_104080222 191
99 3300028380 Ga0268265_10582324 Ga0268265_105823242 191
100 3300028800 Ga0265338_10269319 Ga0265338_102693192 191
101 3300031548 Ga0307408_100453236 Ga0307408_1004532362 191
102 3300031901 Ga0307406_10773136 Ga0307406_107731361 191
103 3300035113 Ga0373936_0212609 Ga0373936_0212609_217_792 191
104 3300035410 Ga0373924_0309860 Ga0373924_0309860_14_589 191
105 3300039437 Ga0436365_0148499 Ga0436365_0148499_738_1313 191
106 3300039437 Ga0436365_0578592 Ga0436365_0578592_198_800 191
107 3300039438 Ga0436360_0689178 Ga0436360_0689178_801_1376 191
108 3300039447 Ga0436361_0882074 Ga0436361_0882074_5226_5801 191
109 3300039447 Ga0436361_0944950 Ga0436361_0944950_103_678 191
110 3300039450 Ga0436363_1075948 Ga0436363_1075948_1423_1998 191
111 3300039453 Ga0436362_0177798 Ga0436362_0177798_2268_2870 191
112 3300042876 Ga0451577_0339933 Ga0451577_0339933_687_1262 191
113 3300045051 Ga0451576_0110137 Ga0451576_0110137_1423_1998 191
114 3300046455 Ga0495603_0111492 Ga0495603_0111492_593_1168 191
115 3300046459 Ga0495629_0385136 Ga0495629_0385136_255_830 191
116 3300046463 Ga0495653_0372311 Ga0495653_0372311_129_836 191
117 3300047319 Ga0495674_0263325 Ga0495674_0263325_305_880 191
118 3300048904 Ga0496101_0633909 Ga0496101_0633909_70_645 191
119 3300048915 Ga0496112_0127744 Ga0496112_0127744_1035_1610 191
120 3300048917 Ga0496114_0170788 Ga0496114_0170788_614_1189 191
121 3300049575 Ga0501039_0862493 Ga0501039_0862493_116_691 191
122 3300049581 Ga0501047_0039875 Ga0501047_0039875_3652_4227 191
123 3300049585 Ga0501069_0000151 Ga0501069_0000151_5380_5955 191
124 3300049586 Ga0501070_0002083 Ga0501070_0002083_117_692 191
125 3300049589 Ga0501073_0002668 Ga0501073_0002668_6228_6803 191
126 3300049589 Ga0501073_0161213 Ga0501073_0161213_943_1518 191
127 3300049590 Ga0501074_0009722 Ga0501074_0009722_6292_6867 191
128 3300049741 Ga0501079_0006795 Ga0501079_0006795_1938_2513 191
129 3300049741 Ga0501079_0913906 Ga0501079_0913906_95_670 191
130 3300049742 Ga0501080_0007828 Ga0501080_0007828_5667_6242 191
131 3300049742 Ga0501080_0016910 Ga0501080_0016910_1067_1642 191
132 3300049744 Ga0501083_0012850 Ga0501083_0012850_2388_2963 191
133 3300049823 Ga0501044_0091364 Ga0501044_0091364_2125_2700 191
134 3300050491 nmdc:mga00v17_267307_c1 nmdc:mga00v17_267307_c1_228_803 191
135 3300050511 nmdc:mga08y16_463876_c1 nmdc:mga08y16_463876_c1_406_981 191
136 3300050513 nmdc:mga0rr50_391107_c1 nmdc:mga0rr50_391107_c1_265_840 191
137 3300050514 nmdc:mga08x19_576094_c1 nmdc:mga08x19_576094_c1_35_610 191
138 3300050515 nmdc:mga0a205_224_c2 nmdc:mga0a205_224_c2_9893_10468 191
139 3300050515 nmdc:mga0a205_448335_c1 nmdc:mga0a205_448335_c1_171_746 191
140 3300050515 nmdc:mga0a205_87750_c1 nmdc:mga0a205_87750_c1_645_1220 191
141 3300053077 Ga0495601_0008082 Ga0495601_0008082_4228_4803 191
142 3300061734 Ga0530510_0107538 Ga0530510_0107538_799_1374 191
143 3300025931 Ga0207644_10537887 Ga0207644_105378871 192
144 3300035725 Ga0373947_0043012 Ga0373947_0043012_1837_2415 192
145 3300044712 Ga0453684_0007672 Ga0453684_0007672_15169_15783 192
146 3300045051 Ga0451576_0236618 Ga0451576_0236618_78_656 192
147 3300049744 Ga0501083_0000992 Ga0501083_0000992_1302_1880 192
148 3300017792 Ga0163161_10123663 Ga0163161_101236632 193
149 3300025961 Ga0207712_10657629 Ga0207712_106576292 193
150 3300035172 Ga0373955_0254798 Ga0373955_0254798_168_749 193
151 3300037471 Ga0395905_0000003 Ga0395905_0000003_204155_204739 193
152 3300046516 Ga0495628_0068574 Ga0495628_0068574_296_877 193
153 3300053078 Ga0495612_0047772 Ga0495612_0047772_531_1112 193
154 3300005445 Ga0070708_100457001 Ga0070708_1004570011 194
155 3300005471 Ga0070698_100258878 Ga0070698_1002588782 194
156 3300005518 Ga0070699_100384305 Ga0070699_1003843052 194
157 3300005536 Ga0070697_100888109 Ga0070697_1008881091 194
158 3300006844 Ga0075428_100116811 Ga0075428_1001168111 194
159 3300027682 Ga0209971_1014456 Ga0209971_10144562 194
160 3300027876 Ga0209974_10001176 Ga0209974_100011762 194
161 3300028379 Ga0268266_10443759 Ga0268266_104437591 194
162 3300039438 Ga0436360_1088030 Ga0436360_1088030_105_689 194
163 3300050512 nmdc:mga0n895_31552_c1 nmdc:mga0n895_31552_c1_3291_3875 194
164 3300053094 Ga0500566_0082336 Ga0500566_0082336_232_816 194
165 3300005293 Ga0065715_10530509 Ga0065715_105305091 195
166 3300005330 Ga0070690_100050763 Ga0070690_1000507633 195
167 3300005340 Ga0070689_100000005 Ga0070689_10000000543 195
168 3300005466 Ga0070685_10173791 Ga0070685_101737912 195
169 3300005535 Ga0070684_100035825 Ga0070684_1000358254 195
170 3300005843 Ga0068860_100107434 Ga0068860_1001074342 195
171 3300006871 Ga0075434_100000051 Ga0075434_10000005160 195
172 3300006871 Ga0075434_100012056 Ga0075434_1000120565 195
173 3300006914 Ga0075436_100001049 Ga0075436_1000010494 195
174 3300006914 Ga0075436_100001089 Ga0075436_1000010897 195
175 3300006914 Ga0075436_100327956 Ga0075436_1003279561 195
176 3300007076 Ga0075435_100000006 Ga0075435_10000000672 195
177 3300007076 Ga0075435_100021934 Ga0075435_1000219343 195
178 3300007076 Ga0075435_100158992 Ga0075435_1001589922 195
179 3300009093 Ga0105240_10436485 Ga0105240_104364852 195
180 3300009177 Ga0105248_10184301 Ga0105248_101843012 195
181 3300009545 Ga0105237_10083815 Ga0105237_100838153 195
182 3300009551 Ga0105238_10000426 Ga0105238_1000042634 195
183 3300013296 Ga0157374_10000190 Ga0157374_1000019020 195
184 3300013306 Ga0163162_11747701 Ga0163162_117477011 195
185 3300013306 Ga0163162_11915811 Ga0163162_119158111 195
186 3300013307 Ga0157372_10298036 Ga0157372_102980362 195
187 3300014969 Ga0157376_10051036 Ga0157376_100510361 195
188 3300014969 Ga0157376_11081497 Ga0157376_110814971 195
189 3300017792 Ga0163161_11160919 Ga0163161_111609191 195
190 3300025912 Ga0207707_10001135 Ga0207707_1000113512 195
191 3300025913 Ga0207695_10572654 Ga0207695_105726541 195
192 3300025914 Ga0207671_10393859 Ga0207671_103938592 195
193 3300025914 Ga0207671_10631559 Ga0207671_106315592 195
194 3300025936 Ga0207670_10000004 Ga0207670_10000004417 195
195 3300025941 Ga0207711_10031456 Ga0207711_100314563 195
196 3300025961 Ga0207712_10999215 Ga0207712_109992151 195
197 3300028381 Ga0268264_10144486 Ga0268264_101444862 195
198 3300031507 Ga0307509_10333698 Ga0307509_103336981 195
199 3300031548 Ga0307408_100004437 Ga0307408_1000044375 195
200 3300031548 Ga0307408_100026087 Ga0307408_1000260872 195
201 3300032002 Ga0307416_100189950 Ga0307416_1001899501 195
202 3300041406 Ga0439439_0007661 Ga0439439_0007661_1320_1907 195
203 3300042014 Ga0439457_076469 Ga0439457_076469_101_688 195
204 3300042156 Ga0439446_0021685 Ga0439446_0021685_711_1298 195
205 3300042435 Ga0439434_0070347 Ga0439434_0070347_421_1008 195
206 3300044694 Ga0466963_0021421 Ga0466963_0021421_3215_3808 195
207 3300046472 Ga0495580_0018314 Ga0495580_0018314_4269_4886 195
208 3300046475 Ga0495639_0019879 Ga0495639_0019879_1968_2585 195
209 3300046517 Ga0495630_0002128 Ga0495630_0002128_1682_2299 195
210 3300046531 Ga0495665_0349255 Ga0495665_0349255_118_735 195
211 3300046690 Ga0495624_0010175 Ga0495624_0010175_683_1300 195
212 3300047315 Ga0495581_0178910 Ga0495581_0178910_79_699 195
213 3300047315 Ga0495581_0229788 Ga0495581_0229788_183_800 195
214 3300047321 Ga0495676_0052368 Ga0495676_0052368_448_1065 195
215 3300047471 Ga0495684_0002958 Ga0495684_0002958_351_968 195
216 3300048907 Ga0496104_0949561 Ga0496104_0949561_109_696 195
217 3300048908 Ga0496105_0592290 Ga0496105_0592290_113_700 195
218 3300048918 Ga0496115_0297047 Ga0496115_0297047_398_985 195
219 3300049705 Ga0501225_0150224 Ga0501225_0150224_61_657 195
220 3300050512 nmdc:mga0n895_52_c1 nmdc:mga0n895_52_c1_54425_55012 195
221 3300050512 nmdc:mga0n895_77465_c1 nmdc:mga0n895_77465_c1_2243_2836 195
222 3300050513 nmdc:mga0rr50_15_c1 nmdc:mga0rr50_15_c1_71714_72301 195
223 3300050513 nmdc:mga0rr50_953371_c1 nmdc:mga0rr50_953371_c1_44_631 195
224 3300050514 nmdc:mga08x19_609_c1 nmdc:mga08x19_609_c1_9658_10245 195
225 3300050514 nmdc:mga08x19_9343_c1 nmdc:mga08x19_9343_c1_1306_1899 195

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06736

TMEM175

Endosomal/lysosomal potassium channel TMEM175

5

90

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vre-assembly1.cif.gz_D crystal structure of a lysosomal potassium-selective channel tmem175 homolog from chamaesiphon minutus 0.8589 3 179
5vre-assembly1.cif.gz_D crystal structure of a lysosomal potassium-selective channel tmem175 homolog from chamaesiphon minutus 0.8067 3 179
6w8p-assembly1.cif.gz_B structure of membrane protein with ions 0.7985 5 175
8fyf-assembly1.cif.gz_B human tmem175-lamp1 transmembrane domain only complex 0.7829 2 193
7unl-assembly1.cif.gz_A human tmem175 in an open state 0.7781 1 194
ID Description Score Start End Superfamily
af_Q8MZ67_1_133_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.6267 41 179 1.20.140.150
af_A0A2R8Q5Z1_5_176_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.58 30 179 1.20.1070.10
af_Q8MZ67_1_133_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5466 41 179 1.20.140.150
af_Q71LX4_2207_2375_1.20.1410.10 Mainly Alpha;Up-down Bundle;I/LWEQ domain;I/LWEQ domain 0.5314 1 138 1.20.1410.10
af_Q6P0S3_121_241_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.5128 38 168 1.20.58.390
ID Description Score Start End GO Terms
AF-A0A524JF56-F1-model_v4 DUF1211 domain-containing protein 0.9952 1 178 GO:0005267
GO:0015252
GO:0016020
AF-A0A2V5PTR6-F1-model_v4 DUF1211 domain-containing protein 0.9926 1 175 GO:0005267
GO:0015252
GO:0016020
AF-A0A7V8XUC2-F1-model_v4 DUF1211 domain-containing protein 0.9923 1 194 GO:0005267
GO:0015252
GO:0016020
AF-A0A529ZQU9-F1-model_v4 DUF1211 domain-containing protein 0.9909 1 124 GO:0005267
GO:0015252
GO:0016020
AF-A0A524JF56-F1-model_v4 DUF1211 domain-containing protein 0.9897 1 178 GO:0005267
GO:0015252
GO:0016020

Feature Viewer

pLDDT pTM Quality
90.45 0.86 High
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Predicted Structure (AlphaFold2)

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