F337915

General Info

Members Datasets Scaffolds Average Seq Length
225 143 225 160

Family's Representative Sequence

Representative Sequence 3300028794|Ga0307515_10000001|Ga0307515_100000012749
Length 186
Sequence MMIIKIKAVDNCVIAVFKACFYNPGFIFAIIMTPQKFTPQQALPKAKHYCAYQERCHSEVKSKLYGFGLNSKEVDEIVSTLIEENYLNEERFAIQFAGGHFRSKKWGKVKITHALKQKQVSAYCIKKALQQINADDYENTLQKLFDEKLRTLKAEKNIFIKKRKMQDHLMQKGFETDLVRGLVNTM

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
47 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
65 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
108 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
109 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
110 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
111 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
112 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
113 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
114 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
121 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
122 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
123 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
127 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
132 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
133 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
134 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
135 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
136 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
137 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
138 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
139 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
140 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
141 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
142 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
143 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.11
Nodule 0
Rhizoplane 0.89
Rhizosphere 84.89
Stem 0
Stem Tuber 0
Unclassified 7.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10123337 3300003316 Bacteria 1499
2 rootL2_10129176 3300003322 Bacteria 4157
3 rootL2_10323597 3300003322 Unclassified 2846
4 rootH1_10249068 3300003323 Unclassified 1645
5 rootH1_10256197 3300003323 Bacteria 2160
6 Ga0065714_10073697 3300005288 Unclassified 3144
7 Ga0070658_10096000 3300005327 Bacteria 2447
8 Ga0070683_100627112 3300005329 Bacteria 1029
9 Ga0070690_100825978 3300005330 Unclassified 720
10 Ga0070670_100129056 3300005331 Bacteria 2182
11 Ga0070670_100320253 3300005331 Bacteria 1358
12 Ga0070666_10000128 3300005335 Bacteria 53252
13 Ga0070680_100330603 3300005336 Bacteria 1294
14 Ga0070680_100595420 3300005336 Bacteria 949
15 Ga0070682_100000012 3300005337 Bacteria 265658
16 Ga0070682_100213188 3300005337 Bacteria 1370
17 Ga0068868_100112792 3300005338 Bacteria 2210
18 Ga0070660_100012112 3300005339 Bacteria 6157
19 Ga0070671_100285554 3300005355 Bacteria 1404
20 Ga0070671_100296920 3300005355 Bacteria 1375
21 Ga0070673_102257101 3300005364 Bacteria 517
22 Ga0070678_100359503 3300005456 Bacteria 1254
23 Ga0070681_10911171 3300005458 Bacteria 798
24 Ga0070681_11792457 3300005458 Bacteria 541
25 Ga0070698_100248383 3300005471 Bacteria 1712
26 Ga0070679_100007464 3300005530 Bacteria 10219
27 Ga0070679_100257767 3300005530 Bacteria 1699
28 Ga0070684_100159009 3300005535 Bacteria 2049
29 Ga0070684_100738054 3300005535 Bacteria 919
30 Ga0068853_100037804 3300005539 Bacteria 4109
31 Ga0068853_100808774 3300005539 Bacteria 898
32 Ga0068855_100020850 3300005563 Bacteria 7860
33 Ga0068855_100646056 3300005563 Bacteria 1137
34 Ga0068855_101046741 3300005563 Bacteria 855
35 Ga0068855_101950774 3300005563 Bacteria 594
36 Ga0068857_100019605 3300005577 Bacteria 5941
37 Ga0068854_101477498 3300005578 Unclassified 616
38 Ga0068856_100177179 3300005614 Bacteria 2145
39 Ga0068852_100009358 3300005616 Bacteria 7275
40 Ga0068852_100019244 3300005616 Bacteria 5398
41 Ga0068859_100000018 3300005617 Bacteria 248813
42 Ga0068859_100000461 3300005617 Bacteria 40272
43 Ga0068864_100028811 3300005618 Bacteria 4698
44 Ga0068861_101183883 3300005719 Bacteria 738
45 Ga0068851_10018969 3300005834 Bacteria 3321
46 Ga0068851_10028113 3300005834 Bacteria 2776
47 Ga0068863_100008502 3300005841 Bacteria 10024
48 Ga0068858_100048939 3300005842 Bacteria 3915
49 Ga0068860_100012749 3300005843 Bacteria 8264
50 Ga0075366_10061409 3300006195 Bacteria 2234
51 Ga0075366_10292471 3300006195 Bacteria 996
52 Ga0097621_100069841 3300006237 Bacteria 2901
53 Ga0068871_100165183 3300006358 Bacteria 1895
54 Ga0097620_100000018 3300006931 Bacteria 248813
55 Ga0097620_100000461 3300006931 Bacteria 40272
56 Ga0105240_10176880 3300009093 Bacteria 2522
57 Ga0105245_10154200 3300009098 Bacteria 2174
58 Ga0105247_10055701 3300009101 Bacteria 2440
59 Ga0114129_10043715 3300009147 Bacteria 6303
60 Ga0105241_10000510 3300009174 Bacteria 29254
61 Ga0105242_10783621 3300009176 Bacteria 942
62 Ga0105248_10829356 3300009177 Bacteria 1044
63 Ga0105237_10001030 3300009545 Bacteria 37560
64 Ga0105237_11050663 3300009545 Unclassified 821
65 Ga0105238_10235832 3300009551 Bacteria 1807
66 Ga0105249_10005809 3300009553 Bacteria 10672
67 Ga0105249_10517038 3300009553 Bacteria 1241
68 Ga0105239_10006413 3300010375 Bacteria 13656
69 Ga0105239_10017205 3300010375 Bacteria 7992
70 Ga0105239_10019481 3300010375 Bacteria 7490
71 Ga0105239_10148007 3300010375 Bacteria 2620
72 Ga0105246_10473918 3300011119 Bacteria 1057
73 Ga0157373_10006366 3300013100 Bacteria 8820
74 Ga0157373_10611227 3300013100 Bacteria 794
75 Ga0157371_10002756 3300013102 Bacteria 16506
76 Ga0157371_10002926 3300013102 Bacteria 15940
77 Ga0157371_10012575 3300013102 Bacteria 6465
78 Ga0157371_10187823 3300013102 Unclassified 1479
79 Ga0157370_10000628 3300013104 Bacteria 43950
80 Ga0157370_10178528 3300013104 Bacteria 1973
81 Ga0157370_10306086 3300013104 Bacteria 1467
82 Ga0157370_10788907 3300013104 Bacteria 865
83 Ga0157369_10887357 3300013105 Bacteria 915
84 Ga0157369_11226327 3300013105 Bacteria 765
85 Ga0157374_10127045 3300013296 Bacteria 2465
86 Ga0157374_10304318 3300013296 Bacteria 1577
87 Ga0157374_10410560 3300013296 Bacteria 1352
88 Ga0157378_10042760 3300013297 Unclassified 4021
89 Ga0163162_10000599 3300013306 Bacteria 33336
90 Ga0157372_10009138 3300013307 Bacteria 10528
91 Ga0157372_10087427 3300013307 Bacteria 3537
92 Ga0157372_10246680 3300013307 Bacteria 2072
93 Ga0157372_10296245 3300013307 Bacteria 1881
94 Ga0157372_10400870 3300013307 Bacteria 1599
95 Ga0157372_10414735 3300013307 Bacteria 1569
96 Ga0157372_10864246 3300013307 Unclassified 1050
97 Ga0157372_11054257 3300013307 Bacteria 941
98 Ga0157375_10179316 3300013308 Unclassified 2269
99 Ga0157375_10954581 3300013308 Bacteria 999
100 Ga0163163_10083604 3300014325 Bacteria 3197
101 Ga0163163_10304314 3300014325 Bacteria 1647
102 Ga0157380_11279962 3300014326 Bacteria 780
103 Ga0157377_10419227 3300014745 Bacteria 916
104 Ga0157376_10041339 3300014969 Bacteria 3773
105 Ga0209258_111027 3300025242 Bacteria 1153
106 Ga0209646_1001044 3300025246 Bacteria 8347
107 Ga0207656_10016602 3300025321 Bacteria 2869
108 Ga0207680_10000212 3300025903 Bacteria 27928
109 Ga0207647_10007138 3300025904 Bacteria 8101
110 Ga0207705_10022510 3300025909 Bacteria 4494
111 Ga0207705_10397880 3300025909 Bacteria 1065
112 Ga0207705_11158158 3300025909 Bacteria 594
113 Ga0207654_10213259 3300025911 Bacteria 1277
114 Ga0207707_10079032 3300025912 Bacteria 2872
115 Ga0207695_10012275 3300025913 Bacteria 10290
116 Ga0207695_10017332 3300025913 Bacteria 8385
117 Ga0207671_10001806 3300025914 Bacteria 23915
118 Ga0207660_10014976 3300025917 Bacteria 5111
119 Ga0207660_10171526 3300025917 Bacteria 1679
120 Ga0207657_10011455 3300025919 Bacteria 8805
121 Ga0207657_10084365 3300025919 Bacteria 2663
122 Ga0207652_10000051 3300025921 Bacteria 120327
123 Ga0207652_10079076 3300025921 Bacteria 2872
124 Ga0207652_10265842 3300025921 Bacteria 1547
125 Ga0207644_10206172 3300025931 Bacteria 1552
126 Ga0207644_10222339 3300025931 Bacteria 1497
127 Ga0207644_10393732 3300025931 Bacteria 1131
128 Ga0207690_10041309 3300025932 Bacteria 3021
129 Ga0207711_10239114 3300025941 Bacteria 1665
130 Ga0207689_10000602 3300025942 Bacteria 34433
131 Ga0207661_10088987 3300025944 Bacteria 2568
132 Ga0207667_10018305 3300025949 Bacteria 7861
133 Ga0207667_11121717 3300025949 Bacteria 769
134 Ga0207667_11147619 3300025949 Bacteria 758
135 Ga0207667_11224903 3300025949 Unclassified 729
136 Ga0207712_10076081 3300025961 Bacteria 2429
137 Ga0207640_11314141 3300025981 Bacteria 646
138 Ga0207658_10082300 3300025986 Bacteria 2471
139 Ga0207703_10013242 3300026035 Bacteria 6423
140 Ga0207703_10356910 3300026035 Unclassified 1347
141 Ga0207639_10030877 3300026041 Bacteria 3933
142 Ga0207678_10086923 3300026067 Bacteria 2672
143 Ga0207702_10130908 3300026078 Bacteria 2257
144 Ga0207702_10245043 3300026078 Bacteria 1681
145 Ga0207702_10490703 3300026078 Bacteria 1196
146 Ga0207641_10000015 3300026088 Bacteria 321332
147 Ga0207641_10597535 3300026088 Bacteria 1080
148 Ga0207648_10207140 3300026089 Bacteria 1740
149 Ga0207676_10021431 3300026095 Bacteria 4740
150 Ga0207676_10505417 3300026095 Bacteria 1148
151 Ga0207674_10296396 3300026116 Bacteria 1566
152 Ga0207674_10555083 3300026116 Unclassified 1110
153 Ga0207675_100790307 3300026118 Bacteria 962
154 Ga0207698_10005291 3300026142 Bacteria 7946
155 Ga0207698_10013452 3300026142 Bacteria 5399
156 Ga0207698_10904280 3300026142 Bacteria 890
157 Ga0207698_11226688 3300026142 Unclassified 764
158 Ga0268264_10000844 3300028381 Bacteria 32786
159 Ga0307517_10016737 3300028786 Bacteria 9612
160 Ga0307515_10000001 3300028794 Bacteria 4259510
161 Ga0265327_10000024 3300031251 Bacteria 382499
162 Ga0265327_10103433 3300031251 Bacteria 1370
163 Ga0307513_10055755 3300031456 Bacteria 4226
164 Ga0307513_10548226 3300031456 Bacteria 869
165 Ga0307509_10083473 3300031507 Bacteria 3293
166 Ga0373927_0200828 3300035695 Bacteria 1309
167 Ga0395899_0026173 3300037312 Bacteria 4402
168 Ga0395899_0250463 3300037312 Bacteria 1216
169 Ga0395900_0011131 3300037418 Bacteria 9194
170 Ga0395900_0095451 3300037418 Unclassified 3055
171 Ga0395900_0224754 3300037418 Unclassified 1890
172 Ga0395900_0246994 3300037418 Bacteria 1787
173 Ga0395898_0001425 3300037466 Bacteria 34011
174 Ga0395898_0381669 3300037466 Bacteria 1344
175 Ga0395898_0447865 3300037466 Bacteria 1230
176 Ga0395905_0055864 3300037471 Bacteria 3695
177 Ga0395901_0022855 3300038443 Bacteria 6411
178 Ga0395901_0537654 3300038443 Bacteria 1185
179 Ga0395901_0731434 3300038443 Bacteria 984
180 Ga0451793_1644898 3300041452 Bacteria 579
181 Ga0451804_0412770 3300041463 Bacteria 683
182 Ga0451833_0900869 3300041491 Bacteria 776
183 Ga0451841_1325702 3300041498 Bacteria 788
184 Ga0451847_0646331 3300041503 Bacteria 606
185 Ga0451851_0584695 3300041507 Bacteria 621
186 Ga0451853_3288883 3300041512 Bacteria 904
187 Ga0466969_0001229 3300044656 Bacteria 13855
188 Ga0466972_0000044 3300044658 Bacteria 131031
189 Ga0466972_0008989 3300044658 Bacteria 5015
190 Ga0466965_0103938 3300044683 Bacteria 1455
191 Ga0466966_0034190 3300044684 Bacteria 3288
192 Ga0466964_0070694 3300044706 Bacteria 1475
193 Ga0453684_0053373 3300044712 Bacteria 5276
194 Ga0466971_0194903 3300044719 Bacteria 955
195 Ga0466968_0091100 3300044735 Bacteria 1351
196 Ga0466968_0236335 3300044735 Bacteria 864
197 Ga0466957_0001392 3300044842 Bacteria 12620
198 Ga0466959_0000014 3300045049 Bacteria 150962
199 Ga0495638_0095363 3300046460 Bacteria 1787
200 Ga0495632_0371483 3300046519 Bacteria 627
201 Ga0495672_0095601 3300047320 Bacteria 1622
202 Ga0495686_0235611 3300047472 Bacteria 1034
203 Ga0495686_0461514 3300047472 Bacteria 673
204 Ga0501047_0100811 3300049581 Bacteria 2767
205 Ga0501047_0420823 3300049581 Bacteria 1167
206 Ga0501070_0473665 3300049586 Bacteria 1008
207 Ga0501080_0168781 3300049742 Bacteria 2019
208 nmdc:mga0k408_21724_c1 3300050493 Bacteria 3607
209 nmdc:mga0k408_599689_c1 3300050493 Bacteria 649
210 nmdc:mga0k408_65159_c1 3300050493 Bacteria 2120
211 nmdc:mga05p37_54569_c2 3300050507 Bacteria 3092
212 nmdc:mga08y16_1589906_c1 3300050511 Bacteria 612
213 nmdc:mga0rr50_844629_c1 3300050513 Bacteria 781
214 Ga0500578_0004806 3300053086 Bacteria 9368
215 Ga0500646_0046804 3300053090 Bacteria 1235
216 Ga0500583_0000001 3300053092 Bacteria 241642
217 Ga0500583_0001901 3300053092 Bacteria 6107
218 Ga0500594_0067144 3300053118 Bacteria 1047
219 Ga0500573_0046679 3300053140 Bacteria 2496
220 Ga0500589_004998 3300053147 Bacteria 5098
221 Ga0500639_227899 3300053163 Bacteria 770
222 Ga0500636_0041775 3300053177 Bacteria 2712
223 Ga0500636_0480432 3300053177 Bacteria 554
224 Ga0466962_0204533 3300061719 Unclassified 965
225 Ga0466962_0218059 3300061719 Bacteria 934

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005563 Ga0068855_101046741 Ga0068855_1010467411 147
2 3300009093 Ga0105240_10176880 Ga0105240_101768805 147
3 3300013100 Ga0157373_10611227 Ga0157373_106112272 147
4 3300013104 Ga0157370_10788907 Ga0157370_107889071 147
5 3300013105 Ga0157369_11226327 Ga0157369_112263272 147
6 3300013307 Ga0157372_10296245 Ga0157372_102962452 147
7 3300025242 Ga0209258_111027 Ga0209258_1110272 147
8 3300025913 Ga0207695_10012275 Ga0207695_100122752 147
9 3300025949 Ga0207667_11147619 Ga0207667_111476192 147
10 3300010375 Ga0105239_10017205 Ga0105239_100172052 148
11 3300037312 Ga0395899_0026173 Ga0395899_0026173_2272_2739 149
12 3300037418 Ga0395900_0095451 Ga0395900_0095451_673_1140 149
13 3300037466 Ga0395898_0001425 Ga0395898_0001425_18708_19175 149
14 3300038443 Ga0395901_0022855 Ga0395901_0022855_4521_4988 149
15 3300050511 nmdc:mga08y16_1589906_c1 nmdc:mga08y16_1589906_c1_99_554 151
16 3300013307 Ga0157372_10400870 Ga0157372_104008702 153
17 3300003323 rootH1_10249068 rootH1_102490682 154
18 3300005331 Ga0070670_100320253 Ga0070670_1003202532 154
19 3300011119 Ga0105246_10473918 Ga0105246_104739181 154
20 3300013296 Ga0157374_10410560 Ga0157374_104105602 154
21 3300005329 Ga0070683_100627112 Ga0070683_1006271122 155
22 3300005330 Ga0070690_100825978 Ga0070690_1008259782 155
23 3300005336 Ga0070680_100330603 Ga0070680_1003306032 155
24 3300005458 Ga0070681_10911171 Ga0070681_109111712 155
25 3300005458 Ga0070681_11792457 Ga0070681_117924571 155
26 3300005530 Ga0070679_100007464 Ga0070679_1000074648 155
27 3300005535 Ga0070684_100738054 Ga0070684_1007380542 155
28 3300005539 Ga0068853_100808774 Ga0068853_1008087742 155
29 3300005563 Ga0068855_100646056 Ga0068855_1006460562 155
30 3300005578 Ga0068854_101477498 Ga0068854_1014774981 155
31 3300005617 Ga0068859_100000461 Ga0068859_10000046112 155
32 3300006931 Ga0097620_100000461 Ga0097620_10000046112 155
33 3300013100 Ga0157373_10006366 Ga0157373_100063666 155
34 3300013102 Ga0157371_10002756 Ga0157371_100027568 155
35 3300013102 Ga0157371_10002926 Ga0157371_100029269 155
36 3300013102 Ga0157371_10012575 Ga0157371_100125756 155
37 3300013102 Ga0157371_10187823 Ga0157371_101878232 155
38 3300013104 Ga0157370_10000628 Ga0157370_1000062826 155
39 3300013104 Ga0157370_10178528 Ga0157370_101785282 155
40 3300013104 Ga0157370_10306086 Ga0157370_103060862 155
41 3300013105 Ga0157369_10887357 Ga0157369_108873572 155
42 3300013307 Ga0157372_10009138 Ga0157372_100091382 155
43 3300013307 Ga0157372_10087427 Ga0157372_100874273 155
44 3300013307 Ga0157372_10414735 Ga0157372_104147352 155
45 3300013307 Ga0157372_11054257 Ga0157372_110542571 155
46 3300025904 Ga0207647_10007138 Ga0207647_100071386 155
47 3300025909 Ga0207705_10022510 Ga0207705_100225102 155
48 3300025917 Ga0207660_10171526 Ga0207660_101715262 155
49 3300025919 Ga0207657_10011455 Ga0207657_100114559 155
50 3300025921 Ga0207652_10000051 Ga0207652_100000519 155
51 3300025921 Ga0207652_10079076 Ga0207652_100790763 155
52 3300025932 Ga0207690_10041309 Ga0207690_100413091 155
53 3300025944 Ga0207661_10088987 Ga0207661_100889872 155
54 3300025949 Ga0207667_11121717 Ga0207667_111217172 155
55 3300025949 Ga0207667_11224903 Ga0207667_112249032 155
56 3300026067 Ga0207678_10086923 Ga0207678_100869234 155
57 3300026078 Ga0207702_10245043 Ga0207702_102450432 155
58 3300026078 Ga0207702_10490703 Ga0207702_104907032 155
59 3300026088 Ga0207641_10597535 Ga0207641_105975352 155
60 3300026116 Ga0207674_10555083 Ga0207674_105550832 155
61 3300031251 Ga0265327_10000024 Ga0265327_10000024114 155
62 3300031456 Ga0307513_10548226 Ga0307513_105482261 155
63 3300037312 Ga0395899_0250463 Ga0395899_0250463_296_763 155
64 3300037418 Ga0395900_0011131 Ga0395900_0011131_2147_2614 155
65 3300037418 Ga0395900_0224754 Ga0395900_0224754_1128_1595 155
66 3300037418 Ga0395900_0246994 Ga0395900_0246994_816_1283 155
67 3300037466 Ga0395898_0381669 Ga0395898_0381669_80_547 155
68 3300037466 Ga0395898_0447865 Ga0395898_0447865_476_943 155
69 3300037471 Ga0395905_0055864 Ga0395905_0055864_2856_3323 155
70 3300038443 Ga0395901_0537654 Ga0395901_0537654_560_1027 155
71 3300038443 Ga0395901_0731434 Ga0395901_0731434_264_731 155
72 3300041452 Ga0451793_1644898 Ga0451793_1644898_41_508 155
73 3300041491 Ga0451833_0900869 Ga0451833_0900869_210_683 155
74 3300047320 Ga0495672_0095601 Ga0495672_0095601_489_956 155
75 3300005355 Ga0070671_100296920 Ga0070671_1002969202 156
76 3300014326 Ga0157380_11279962 Ga0157380_112799622 156
77 3300025931 Ga0207644_10393732 Ga0207644_103937322 156
78 3300028794 Ga0307515_10000001 Ga0307515_100000012749 156
79 3300031251 Ga0265327_10103433 Ga0265327_101034332 156
80 3300044712 Ga0453684_0053373 Ga0453684_0053373_227_700 156
81 3300006195 Ga0075366_10292471 Ga0075366_102924712 157
82 3300026142 Ga0207698_11226688 Ga0207698_112266881 157
83 3300041503 Ga0451847_0646331 Ga0451847_0646331_112_594 157
84 3300047472 Ga0495686_0235611 Ga0495686_0235611_182_712 157
85 3300049742 Ga0501080_0168781 Ga0501080_0168781_1033_1506 157
86 3300050493 nmdc:mga0k408_599689_c1 nmdc:mga0k408_599689_c1_37_513 157
87 3300003322 rootL2_10323597 rootL2_103235974 158
88 3300003323 rootH1_10256197 rootH1_102561971 158
89 3300005288 Ga0065714_10073697 Ga0065714_100736972 158
90 3300005327 Ga0070658_10096000 Ga0070658_100960002 158
91 3300005336 Ga0070680_100595420 Ga0070680_1005954202 158
92 3300005337 Ga0070682_100000012 Ga0070682_10000001297 158
93 3300005337 Ga0070682_100213188 Ga0070682_1002131882 158
94 3300005339 Ga0070660_100012112 Ga0070660_1000121126 158
95 3300005364 Ga0070673_102257101 Ga0070673_1022571011 158
96 3300005530 Ga0070679_100257767 Ga0070679_1002577671 158
97 3300005535 Ga0070684_100159009 Ga0070684_1001590092 158
98 3300005539 Ga0068853_100037804 Ga0068853_1000378044 158
99 3300005563 Ga0068855_100020850 Ga0068855_1000208509 158
100 3300005563 Ga0068855_101950774 Ga0068855_1019507741 158
101 3300005577 Ga0068857_100019605 Ga0068857_1000196052 158
102 3300005614 Ga0068856_100177179 Ga0068856_1001771792 158
103 3300005616 Ga0068852_100009358 Ga0068852_1000093588 158
104 3300005719 Ga0068861_101183883 Ga0068861_1011838831 158
105 3300006195 Ga0075366_10061409 Ga0075366_100614092 158
106 3300009545 Ga0105237_11050663 Ga0105237_110506632 158
107 3300009553 Ga0105249_10517038 Ga0105249_105170382 158
108 3300010375 Ga0105239_10006413 Ga0105239_100064132 158
109 3300013307 Ga0157372_10246680 Ga0157372_102466802 158
110 3300013307 Ga0157372_10864246 Ga0157372_108642462 158
111 3300025909 Ga0207705_10397880 Ga0207705_103978802 158
112 3300025909 Ga0207705_11158158 Ga0207705_111581581 158
113 3300025912 Ga0207707_10079032 Ga0207707_100790322 158
114 3300025917 Ga0207660_10014976 Ga0207660_100149766 158
115 3300025919 Ga0207657_10084365 Ga0207657_100843651 158
116 3300025921 Ga0207652_10265842 Ga0207652_102658421 158
117 3300025949 Ga0207667_10018305 Ga0207667_100183052 158
118 3300025981 Ga0207640_11314141 Ga0207640_113141411 158
119 3300026078 Ga0207702_10130908 Ga0207702_101309084 158
120 3300026116 Ga0207674_10296396 Ga0207674_102963962 158
121 3300026118 Ga0207675_100790307 Ga0207675_1007903071 158
122 3300026142 Ga0207698_10005291 Ga0207698_100052918 158
123 3300026142 Ga0207698_10904280 Ga0207698_109042802 158
124 3300044656 Ga0466969_0001229 Ga0466969_0001229_9426_9905 158
125 3300044683 Ga0466965_0103938 Ga0466965_0103938_333_812 158
126 3300044684 Ga0466966_0034190 Ga0466966_0034190_2515_2994 158
127 3300044706 Ga0466964_0070694 Ga0466964_0070694_681_1160 158
128 3300044735 Ga0466968_0091100 Ga0466968_0091100_386_865 158
129 3300044735 Ga0466968_0236335 Ga0466968_0236335_373_852 158
130 3300045049 Ga0466959_0000014 Ga0466959_0000014_143852_144331 158
131 3300049586 Ga0501070_0473665 Ga0501070_0473665_215_694 158
132 3300050493 nmdc:mga0k408_65159_c1 nmdc:mga0k408_65159_c1_700_1179 158
133 3300061719 Ga0466962_0204533 Ga0466962_0204533_460_939 158
134 3300061719 Ga0466962_0218059 Ga0466962_0218059_204_683 158
135 3300005331 Ga0070670_100129056 Ga0070670_1001290563 159
136 3300005335 Ga0070666_10000128 Ga0070666_1000012834 159
137 3300005355 Ga0070671_100285554 Ga0070671_1002855541 159
138 3300005456 Ga0070678_100359503 Ga0070678_1003595032 159
139 3300005471 Ga0070698_100248383 Ga0070698_1002483832 159
140 3300005616 Ga0068852_100019244 Ga0068852_1000192444 159
141 3300005617 Ga0068859_100000018 Ga0068859_10000001883 159
142 3300005618 Ga0068864_100028811 Ga0068864_1000288112 159
143 3300005834 Ga0068851_10028113 Ga0068851_100281132 159
144 3300005841 Ga0068863_100008502 Ga0068863_1000085024 159
145 3300005842 Ga0068858_100048939 Ga0068858_1000489395 159
146 3300005843 Ga0068860_100012749 Ga0068860_1000127492 159
147 3300006237 Ga0097621_100069841 Ga0097621_1000698412 159
148 3300006358 Ga0068871_100165183 Ga0068871_1001651832 159
149 3300006931 Ga0097620_100000018 Ga0097620_10000001883 159
150 3300009098 Ga0105245_10154200 Ga0105245_101542002 159
151 3300009101 Ga0105247_10055701 Ga0105247_100557014 159
152 3300009147 Ga0114129_10043715 Ga0114129_100437155 159
153 3300009174 Ga0105241_10000510 Ga0105241_1000051015 159
154 3300009176 Ga0105242_10783621 Ga0105242_107836212 159
155 3300009177 Ga0105248_10829356 Ga0105248_108293562 159
156 3300009545 Ga0105237_10001030 Ga0105237_1000103013 159
157 3300009551 Ga0105238_10235832 Ga0105238_102358322 159
158 3300009553 Ga0105249_10005809 Ga0105249_100058097 159
159 3300010375 Ga0105239_10019481 Ga0105239_100194812 159
160 3300010375 Ga0105239_10148007 Ga0105239_101480073 159
161 3300013296 Ga0157374_10127045 Ga0157374_101270452 159
162 3300013306 Ga0163162_10000599 Ga0163162_1000059914 159
163 3300013308 Ga0157375_10954581 Ga0157375_109545812 159
164 3300014325 Ga0163163_10083604 Ga0163163_100836045 159
165 3300014969 Ga0157376_10041339 Ga0157376_100413394 159
166 3300025246 Ga0209646_1001044 Ga0209646_10010445 159
167 3300025321 Ga0207656_10016602 Ga0207656_100166022 159
168 3300025903 Ga0207680_10000212 Ga0207680_100002122 159
169 3300025911 Ga0207654_10213259 Ga0207654_102132591 159
170 3300025913 Ga0207695_10017332 Ga0207695_100173327 159
171 3300025914 Ga0207671_10001806 Ga0207671_1000180619 159
172 3300025931 Ga0207644_10222339 Ga0207644_102223391 159
173 3300025941 Ga0207711_10239114 Ga0207711_102391142 159
174 3300025942 Ga0207689_10000602 Ga0207689_1000060215 159
175 3300025961 Ga0207712_10076081 Ga0207712_100760814 159
176 3300025986 Ga0207658_10082300 Ga0207658_100823002 159
177 3300026035 Ga0207703_10013242 Ga0207703_100132427 159
178 3300026041 Ga0207639_10030877 Ga0207639_100308772 159
179 3300026088 Ga0207641_10000015 Ga0207641_1000001523 159
180 3300026089 Ga0207648_10207140 Ga0207648_102071402 159
181 3300026095 Ga0207676_10021431 Ga0207676_100214312 159
182 3300026142 Ga0207698_10013452 Ga0207698_100134524 159
183 3300028381 Ga0268264_10000844 Ga0268264_1000084417 159
184 3300028786 Ga0307517_10016737 Ga0307517_100167374 159
185 3300031456 Ga0307513_10055755 Ga0307513_100557553 159
186 3300031507 Ga0307509_10083473 Ga0307509_100834733 159
187 3300035695 Ga0373927_0200828 Ga0373927_0200828_664_1161 159
188 3300041463 Ga0451804_0412770 Ga0451804_0412770_113_595 159
189 3300041507 Ga0451851_0584695 Ga0451851_0584695_117_599 159
190 3300041512 Ga0451853_3288883 Ga0451853_3288883_283_819 159
191 3300044658 Ga0466972_0000044 Ga0466972_0000044_77658_78182 159
192 3300044658 Ga0466972_0008989 Ga0466972_0008989_2545_3030 159
193 3300044719 Ga0466971_0194903 Ga0466971_0194903_388_882 159
194 3300044842 Ga0466957_0001392 Ga0466957_0001392_11840_12334 159
195 3300047472 Ga0495686_0461514 Ga0495686_0461514_116_601 159
196 3300049581 Ga0501047_0100811 Ga0501047_0100811_1041_1523 159
197 3300049581 Ga0501047_0420823 Ga0501047_0420823_251_736 159
198 3300050493 nmdc:mga0k408_21724_c1 nmdc:mga0k408_21724_c1_2182_2676 159
199 3300050507 nmdc:mga05p37_54569_c2 nmdc:mga05p37_54569_c2_577_1062 159
200 3300050513 nmdc:mga0rr50_844629_c1 nmdc:mga0rr50_844629_c1_42_524 159
201 3300053086 Ga0500578_0004806 Ga0500578_0004806_6282_6767 159
202 3300053090 Ga0500646_0046804 Ga0500646_0046804_558_1040 159
203 3300053092 Ga0500583_0000001 Ga0500583_0000001_128109_128597 159
204 3300053118 Ga0500594_0067144 Ga0500594_0067144_161_646 159
205 3300053140 Ga0500573_0046679 Ga0500573_0046679_1796_2293 159
206 3300053163 Ga0500639_227899 Ga0500639_227899_143_640 159
207 3300053177 Ga0500636_0041775 Ga0500636_0041775_1110_1607 159
208 3300053177 Ga0500636_0480432 Ga0500636_0480432_37_522 159
209 3300003316 rootH1_10123337 rootH1_101233372 160
210 3300003322 rootL2_10129176 rootL2_101291762 160
211 3300005338 Ga0068868_100112792 Ga0068868_1001127922 160
212 3300005834 Ga0068851_10018969 Ga0068851_100189692 160
213 3300013296 Ga0157374_10304318 Ga0157374_103043182 160
214 3300013297 Ga0157378_10042760 Ga0157378_100427604 160
215 3300013308 Ga0157375_10179316 Ga0157375_101793162 160
216 3300014325 Ga0163163_10304314 Ga0163163_103043142 160
217 3300014745 Ga0157377_10419227 Ga0157377_104192271 160
218 3300025931 Ga0207644_10206172 Ga0207644_102061722 160
219 3300026035 Ga0207703_10356910 Ga0207703_103569102 160
220 3300026095 Ga0207676_10505417 Ga0207676_105054172 160
221 3300041498 Ga0451841_1325702 Ga0451841_1325702_195_692 160
222 3300046460 Ga0495638_0095363 Ga0495638_0095363_1062_1559 160
223 3300046519 Ga0495632_0371483 Ga0495632_0371483_39_551 160
224 3300053092 Ga0500583_0001901 Ga0500583_0001901_2080_2577 160
225 3300053147 Ga0500589_004998 Ga0500589_004998_4194_4691 160

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02631

RecX_HTH2

RecX, second three-helix domain

88

129

0.99

PF21981

RecX_HTH3

RecX, third three-helix domain

135

183

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e3v-assembly1.cif.gz_A crystal structure of recx from lactobacillus salivarius 0.923 9 158
3d5l-assembly2.cif.gz_B crystal structure of regulatory protein recx 0.8977 9 152
3d5l-assembly1.cif.gz_A crystal structure of regulatory protein recx 0.8941 9 152
3e3v-assembly1.cif.gz_A crystal structure of recx from lactobacillus salivarius 0.8895 9 158
3c1d-assembly3.cif.gz_A x-ray crystal structure of recx 0.8676 9 152
ID Description Score Start End Superfamily
3e3vA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9483 58 102 1.10.10.10
3d5lB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9445 58 102 1.10.10.10
3d5lA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9316 58 102 1.10.10.10
af_I1M6D9_259_316_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9294 108 159 1.10.10.10
3e3vA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9291 58 102 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A5J5IN95-F1-model_v4 Regulatory protein RecX 0.9893 7 154 GO:0005737
GO:0006282
AF-A0A388Q2Z9-F1-model_v4 Regulatory protein RecX 0.9887 13 155 GO:0005737
GO:0006282
AF-A0A4Q3EVV8-F1-model_v4 Regulatory protein RecX 0.9857 11 158 GO:0005737
GO:0006282
AF-A0A654E368-F1-model_v4 Regulatory protein RecX 0.9855 9 159 GO:0005737
GO:0006282
AF-A0A7K1XYE0-F1-model_v4 Regulatory protein RecX 0.9848 13 158 GO:0005737
GO:0006282

Feature Viewer

pLDDT pTM Quality
94.03 0.86 High
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Predicted Structure (AlphaFold2)

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