F337487

General Info

Members Datasets Scaffolds Average Seq Length
225 167 199 766

Family's Representative Sequence

Representative Sequence 3300005367|Ga0070667_100008757|Ga0070667_1000087574
Length 846
Sequence VRLSLGSRARAGSRHQLVKFPGCLMSGKPLTLHYHKGTHRNIPVRRAGFAVGARQYADFAVLWGLMPDQLVLPRLDSESATTEQKGAVRRRQWGAERRSEPLSIVHPRPSRRKIILGRLGILTTLAAWVTYVISTILKELADNPNAGFRFQFETVSYLIVVTFLTFSALMYLMARQGALYRFRDHARVPRGELDRHFAEYAEGITVLVPSYAEEPQVVRATLWSAALQEFPDLKVVLLLDDPPHPSDLGDRVRLDKTRALTAEIEAELSVPASRFNAALADFRSREKAHGRGTAAEVALLIAEYEAAAEWLESMAAAETVEDHVDEFFVDLVLMGLARELRLVLLGLNAALAQQTSPPRTRIEELYLRLTWIFNVSTETFERKKYASLSHEANKAMNLNAYISLMGHTWQKETTADGVVLRKVGAGVAPELDGEIMDVRDTTYLLTLDADSLLLRDYCLRLVYFLESAGNERVAVTQTPYSSFRGAPTRIERVAGATTDLQHILHQGMTYYGATFWVGANAVIRKRALEDIVEVETNGAFEIRTYIQDRTVIEDTESSIDLGQHGWTLVNYPERLSYSATPPDFGSLVVQRRRWANGGLLILPKLWVQLRQHRSERRAILFREVLLRVNYMASIAWASFGLVFLLAYPYDSRLLSPIVFIAALPYFLAMGSDLRDCGHRFSDILRIYGFNLVLLPVNLAGVLKSLQQAVTGDKIPFARTPKVKDRTAAPAIYVLTPYAIVAFSLLTVWRDAQVGNWGNVAFASVNAILAAGAIRAYIGVFNSAVDVFLGVVNWLYVSPRPKKVKESPVIAKTAEEVDWETILYHGDRRLNRDLRGSADRRRRIAVR

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
3 2643221572 Leifsonia sp. Root60 Isolate Unclassified
4 2643221616 Leifsonia sp. Root227 Isolate Unclassified
5 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
6 2643221649 Leifsonia sp. Root4 Isolate Unclassified
7 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
8 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
9 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
10 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
11 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
12 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
13 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
14 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
15 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
16 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
17 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
18 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
19 2928153084 Leifsonia sp. 563 Isolate Unclassified
20 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
21 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
22 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
23 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
24 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
25 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
26 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
27 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
28 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
29 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
30 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
31 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
32 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
33 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
34 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
35 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
36 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
37 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
38 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
39 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
40 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
41 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
42 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
43 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
44 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
45 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
46 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
47 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
48 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
49 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
50 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
51 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
52 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
55 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
56 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
65 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
101 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
102 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
103 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
104 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
105 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
112 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
113 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
118 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
121 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
128 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
129 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
130 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
131 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
132 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
133 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
134 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
157 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
158 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
159 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
160 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
166 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
167 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.56
Metatranscriptomes 0.89
Isolates 11.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.33
Nodule 0
Rhizoplane 2.67
Rhizosphere 62.67
Stem 0
Stem Tuber 0.44
Unclassified 12.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000923 3300001979 Bacteria 13063
2 JGI24737J22298_10000194 3300001990 Bacteria 19704
3 JGI24735J21928_10000054 3300002067 Bacteria 49038
4 JGI24735J21928_10006773 3300002067 Bacteria 3759
5 JGI25164J39214_1000300 3300002772 Bacteria 33573
6 JGI25165J46597_1000044 3300003214 Bacteria 263289
7 rootL2_10069339 3300003322 Bacteria 6752
8 rootH1_10052821 3300003323 Bacteria 38162
9 Ga0006562J51391_1123486 3300003578 Bacteria 10760
10 Ga0055539_1000027 3300003752 Bacteria 258020
11 Ga0055533_1000020 3300003756 Bacteria 353998
12 Ga0055527_1000005 3300003760 Bacteria 504776
13 Ga0055542_1000006 3300003762 Bacteria 504776
14 Ga0055542_1002587 3300003762 Bacteria 5736
15 Ga0055529_1000013 3300003763 Bacteria 373267
16 Ga0070658_10000063 3300005327 Bacteria 107300
17 Ga0070676_10010181 3300005328 Bacteria 5098
18 Ga0070666_10048405 3300005335 Bacteria 2856
19 Ga0070691_10014335 3300005341 Bacteria 3635
20 Ga0070661_100013691 3300005344 Bacteria 5697
21 Ga0070673_100047968 3300005364 Bacteria 3327
22 Ga0070659_100006637 3300005366 Bacteria 8361
23 Ga0070667_100008757 3300005367 Bacteria 8387
24 Ga0070679_100022793 3300005530 Bacteria 6124
25 Ga0070679_100087214 3300005530 Bacteria 3108
26 Ga0070684_100001879 3300005535 Bacteria 15380
27 Ga0070686_100011318 3300005544 Bacteria 5058
28 Ga0070665_100046647 3300005548 Bacteria 4351
29 Ga0070665_100058160 3300005548 Bacteria 3876
30 Ga0068855_100000107 3300005563 Bacteria 103580
31 Ga0068857_100006090 3300005577 Bacteria 10301
32 Ga0068856_100000018 3300005614 Bacteria 151165
33 Ga0068856_100000200 3300005614 Bacteria 63772
34 Ga0068856_100007115 3300005614 Bacteria 10924
35 Ga0068852_100000089 3300005616 Bacteria 64388
36 Ga0068852_100002346 3300005616 Bacteria 13031
37 Ga0075365_10004437 3300006038 Bacteria 7434
38 Ga0075365_10006625 3300006038 Bacteria 6391
39 Ga0075364_10000355 3300006051 Bacteria 22611
40 Ga0075364_10001652 3300006051 Bacteria 12257
41 Ga0075369_10007545 3300006186 Bacteria 4150
42 Ga0105240_10000571 3300009093 Bacteria 68281
43 Ga0105245_10026848 3300009098 Bacteria 5070
44 Ga0105245_10076164 3300009098 Bacteria 3056
45 Ga0105243_10047117 3300009148 Bacteria 3392
46 Ga0105241_10000854 3300009174 Bacteria 23131
47 Ga0105248_10118045 3300009177 Bacteria 2992
48 Ga0105239_10000411 3300010375 Bacteria 62529
49 Ga0105246_10002109 3300011119 Bacteria 11999
50 Ga0105246_10010197 3300011119 Bacteria 5803
51 Ga0157373_10013504 3300013100 Bacteria 5989
52 Ga0157371_10001166 3300013102 Bacteria 28219
53 Ga0157370_10002562 3300013104 Bacteria 21821
54 Ga0157370_10014796 3300013104 Bacteria 7962
55 Ga0157369_10000376 3300013105 Bacteria 59223
56 Ga0157369_10000466 3300013105 Bacteria 53695
57 Ga0157369_10000752 3300013105 Bacteria 41774
58 Ga0157369_10001256 3300013105 Bacteria 31563
59 Ga0157375_10052424 3300013308 Bacteria 4010
60 Ga0157377_10000314 3300014745 Bacteria 22223
61 Ga0157376_10000035 3300014969 Bacteria 151993
62 Ga0206353_10087649 3300020082 Bacteria 6462
63 Ga0209566_100257 3300025225 Bacteria 50543
64 Ga0209674_100001 3300025226 Bacteria 4013750
65 Ga0209672_100003 3300025228 Bacteria 1560476
66 Ga0209147_100335 3300025229 Bacteria 35182
67 Ga0209563_100001 3300025230 Bacteria 4013775
68 Ga0209563_100948 3300025230 Bacteria 8553
69 Ga0207427_100126 3300025231 Bacteria 95170
70 Ga0209437_100615 3300025233 Bacteria 21824
71 Ga0209677_100001 3300025253 Bacteria 4013787
72 Ga0209677_102257 3300025253 Bacteria 7453
73 Ga0209148_1000004 3300025254 Bacteria 1844481
74 Ga0209233_1000014 3300025261 Bacteria 996641
75 Ga0209455_1000022 3300025272 Bacteria 688910
76 Ga0207697_10007355 3300025315 Bacteria 4919
77 Ga0207655_1013787 3300025728 Bacteria 4612
78 Ga0207647_10003632 3300025904 Bacteria 11550
79 Ga0207645_10000233 3300025907 Bacteria 46095
80 Ga0207705_10000093 3300025909 Bacteria 107314
81 Ga0207654_10005352 3300025911 Bacteria 6483
82 Ga0207695_10001429 3300025913 Bacteria 40195
83 Ga0207657_10001943 3300025919 Bacteria 22314
84 Ga0207652_10015608 3300025921 Bacteria 6182
85 Ga0207706_10000209 3300025933 Bacteria 64890
86 Ga0207691_10002657 3300025940 Bacteria 17468
87 Ga0207667_10000128 3300025949 Bacteria 116173
88 Ga0207658_10010496 3300025986 Bacteria 6291
89 Ga0207702_10000057 3300026078 Bacteria 131118
90 Ga0207702_10000179 3300026078 Bacteria 76263
91 Ga0207683_10006385 3300026121 Bacteria 10098
92 Ga0207698_10000122 3300026142 Bacteria 48775
93 Ga0207698_10000255 3300026142 Bacteria 32639
94 Ga0268266_10030213 3300028379 Bacteria 4604
95 Ga0268266_10042262 3300028379 Bacteria 3893
96 Ga0265338_10003036 3300028800 Bacteria 24163
97 Ga0265338_10009920 3300028800 Bacteria 11259
98 Ga0314311_1244400 3300030733 Bacteria 5688
99 Ga0316179_1065319 3300030734 Bacteria 31804
100 Ga0316183_1071450 3300030742 Bacteria 17896
101 Ga0316182_1174161 3300030745 Bacteria 3659
102 Ga0307514_10004259 3300031649 Bacteria 13222
103 Ga0395899_0002290 3300037312 Bacteria 15622
104 Ga0395899_0011243 3300037312 Bacteria 6857
105 Ga0395899_0049907 3300037312 Bacteria 3109
106 Ga0395900_0000001 3300037418 Bacteria 931146
107 Ga0395900_0015569 3300037418 Bacteria 7752
108 Ga0395900_0085714 3300037418 Bacteria 3237
109 Ga0395898_0000002 3300037466 Bacteria 931013
110 Ga0395898_0000098 3300037466 Bacteria 229806
111 Ga0395905_0002040 3300037471 Bacteria 23070
112 Ga0395901_0000060 3300038443 Bacteria 152235
113 Ga0395901_0001790 3300038443 Bacteria 22159
114 Ga0436360_0637146 3300039438 Bacteria 5226
115 Ga0439464_0000411 3300042439 Bacteria 8447
116 Ga0466961_0037209 3300044693 Bacteria 3122
117 Ga0466957_0031623 3300044842 Unclassified 3164
118 Ga0466960_0017468 3300044901 Bacteria 3127
119 Ga0495629_0048573 3300046459 Bacteria 2975
120 Ga0495645_0001027 3300046543 Bacteria 18997
121 Ga0495667_0000575 3300046559 Bacteria 23449
122 Ga0495670_0000799 3300046691 Bacteria 15144
123 Ga0495649_0001625 3300046694 Bacteria 16725
124 Ga0495677_0008903 3300047445 Bacteria 3716
125 Ga0496102_0020958 3300048905 Bacteria 5780
126 Ga0496103_0040973 3300048906 Bacteria 2847
127 Ga0496104_0068264 3300048907 Bacteria 3378
128 Ga0496110_0013811 3300048913 Bacteria 6692
129 Ga0496114_0011492 3300048917 Bacteria 7076
130 Ga0496114_0052320 3300048917 Bacteria 3402
131 Ga0496117_0000071 3300048920 Bacteria 242170
132 Ga0496117_0025494 3300048920 Bacteria 4648
133 Ga0496118_0002488 3300048921 Bacteria 24735
134 Ga0496119_0003802 3300048922 Bacteria 15438
135 Ga0496119_0011001 3300048922 Bacteria 7548
136 Ga0496119_0015209 3300048922 Bacteria 5952
137 Ga0496120_0003534 3300048923 Bacteria 14145
138 Ga0496122_0000022 3300048925 Bacteria 388704
139 Ga0496123_0000016 3300048926 Bacteria 424330
140 Ga0496123_0006310 3300048926 Bacteria 11532
141 Ga0496124_0004503 3300048927 Bacteria 16254
142 Ga0496125_0006681 3300048928 Bacteria 12413
143 Ga0496126_0000006 3300048929 Bacteria 798804
144 Ga0496126_0002608 3300048929 Bacteria 24019
145 Ga0501032_0001564 3300049569 Bacteria 18259
146 Ga0501033_0001321 3300049570 Bacteria 22055
147 Ga0501033_0077629 3300049570 Bacteria 2437
148 Ga0501034_0000042 3300049571 Bacteria 229124
149 Ga0501034_0004231 3300049571 Bacteria 16025
150 Ga0501034_0006791 3300049571 Bacteria 12240
151 Ga0501034_0010088 3300049571 Bacteria 9856
152 Ga0501034_0016162 3300049571 Bacteria 7655
153 Ga0501034_0033657 3300049571 Bacteria 5197
154 Ga0501036_0008270 3300049572 Bacteria 8529
155 Ga0501037_0010035 3300049573 Bacteria 6947
156 Ga0501037_0027794 3300049573 Bacteria 4180
157 Ga0501038_0018890 3300049574 Bacteria 6223
158 Ga0501038_0037512 3300049574 Bacteria 4249
159 Ga0501038_0054166 3300049574 Bacteria 3450
160 Ga0501039_0003494 3300049575 Bacteria 11752
161 Ga0501043_0001520 3300049579 Bacteria 20261
162 Ga0501043_0034892 3300049579 Bacteria 3956
163 Ga0501043_0063487 3300049579 Bacteria 2900
164 Ga0501046_0015175 3300049580 Bacteria 6477
165 Ga0501047_0026143 3300049581 Bacteria 5615
166 Ga0501047_0050275 3300049581 Bacteria 4025
167 Ga0501047_0057630 3300049581 Bacteria 3756
168 Ga0501069_0016275 3300049585 Bacteria 3992
169 Ga0501070_0000044 3300049586 Bacteria 108859
170 Ga0501070_0002274 3300049586 Bacteria 16887
171 Ga0501070_0056982 3300049586 Bacteria 3239
172 Ga0501073_0006376 3300049589 Bacteria 8780
173 Ga0501080_0000271 3300049742 Bacteria 39284
174 Ga0501044_0018479 3300049823 Bacteria 7469
175 Ga0501044_0026759 3300049823 Bacteria 6103
176 Ga0501044_0108868 3300049823 Bacteria 2781
177 Ga0501045_0019102 3300049824 Bacteria 4882
178 nmdc:mga00v17_13912_c1 3300050491 Bacteria 4477
179 nmdc:mga00v17_443_c1 3300050491 Bacteria 23244
180 nmdc:mga0yw44_4376_c1 3300050492 Bacteria 6466
181 nmdc:mga0yw44_716_c1 3300050492 Bacteria 12167
182 nmdc:mga0k408_8969_c1 3300050493 Bacteria 5381
183 nmdc:mga07m45_2607_c1 3300050496 Bacteria 7333
184 Ga0500635_0000027 3300053080 Bacteria 104865
185 Ga0500643_000102 3300053087 Bacteria 88029
186 Ga0500643_003908 3300053087 Bacteria 6923
187 Ga0500650_0013351 3300053098 Bacteria 3442
188 Ga0500562_000002 3300053108 Bacteria 977234
189 Ga0500559_0001482 3300053136 Bacteria 13253
190 Ga0500568_0001971 3300053139 Bacteria 12547
191 Ga0500573_0003240 3300053140 Bacteria 8378
192 Ga0500573_0003715 3300053140 Bacteria 7941
193 Ga0500573_0008104 3300053140 Bacteria 5777
194 Ga0500573_0030458 3300053140 Bacteria 3113
195 Ga0500573_0033241 3300053140 Bacteria 2977
196 Ga0500577_0002132 3300053142 Bacteria 5049
197 Ga0500616_0000010 3300053153 Bacteria 761410
198 Ga0500616_0014683 3300053153 Unclassified 4493
199 Ga0500570_001369 3300053724 Bacteria 11153

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050493 nmdc:mga0k408_8969_c1 nmdc:mga0k408_8969_c1_94_2013 639
2 3300049574 Ga0501038_0037512 Ga0501038_0037512_243_2558 667
3 3300037418 Ga0395900_0085714 Ga0395900_0085714_293_2521 680
4 3300053153 Ga0500616_0014683 Ga0500616_0014683_50_2122 687
5 3300003760 Ga0055527_1000005 Ga0055527_1000005309 700
6 3300003762 Ga0055542_1000006 Ga0055542_1000006309 700
7 3300003763 Ga0055529_1000013 Ga0055529_1000013218 700
8 3300025228 Ga0209672_100003 Ga0209672_100003651 700
9 3300025229 Ga0209147_100335 Ga0209147_1003359 700
10 3300025254 Ga0209148_1000004 Ga0209148_1000004946 700
11 3300025272 Ga0209455_1000022 Ga0209455_100002237 700
12 3300005341 Ga0070691_10014335 Ga0070691_100143352 701
13 3300005577 Ga0068857_100006090 Ga0068857_1000060907 701
14 3300048906 Ga0496103_0040973 Ga0496103_0040973_250_2574 704
15 3300048907 Ga0496104_0068264 Ga0496104_0068264_561_2885 704
16 3300048917 Ga0496114_0011492 Ga0496114_0011492_1960_4284 704
17 3300048922 Ga0496119_0015209 Ga0496119_0015209_2555_4879 704
18 3300049571 Ga0501034_0010088 Ga0501034_0010088_1718_3931 706
19 3300049573 Ga0501037_0010035 Ga0501037_0010035_2992_5205 706
20 3300049579 Ga0501043_0001520 Ga0501043_0001520_14353_16566 706
21 3300049581 Ga0501047_0057630 Ga0501047_0057630_714_2927 706
22 3300049585 Ga0501069_0016275 Ga0501069_0016275_1168_3381 706
23 3300049586 Ga0501070_0002274 Ga0501070_0002274_6539_8752 706
24 3300049742 Ga0501080_0000271 Ga0501080_0000271_26715_28928 706
25 3300038443 Ga0395901_0001790 Ga0395901_0001790_4677_6839 707
26 iso_pu_bacteria 2857740372 2857742386 708
27 iso_pu_bacteria 2933418574 2933420982 708
28 3300039438 Ga0436360_0637146 Ga0436360_0637146_2173_4383 713
29 3300044693 Ga0466961_0037209 Ga0466961_0037209_370_2685 713
30 3300044901 Ga0466960_0017468 Ga0466960_0017468_373_2688 713
31 3300049571 Ga0501034_0006791 Ga0501034_0006791_8311_10560 714
32 3300049572 Ga0501036_0008270 Ga0501036_0008270_2652_4901 714
33 3300049574 Ga0501038_0018890 Ga0501038_0018890_1462_3711 714
34 3300049581 Ga0501047_0050275 Ga0501047_0050275_1413_3662 714
35 3300049589 Ga0501073_0006376 Ga0501073_0006376_5252_7501 714
36 3300049823 Ga0501044_0018479 Ga0501044_0018479_3261_5510 714
37 3300046694 Ga0495649_0001625 Ga0495649_0001625_14389_16566 715
38 3300020082 Ga0206353_10087649 Ga0206353_100876492 718
39 3300025253 Ga0209677_102257 Ga0209677_1022572 718
40 3300037418 Ga0395900_0015569 Ga0395900_0015569_3455_5779 718
41 3300037466 Ga0395898_0000098 Ga0395898_0000098_223580_225904 718
42 3300037312 Ga0395899_0011243 Ga0395899_0011243_1813_4170 719
43 iso_pu_bacteria 2939657138 2939660023 719
44 3300028800 Ga0265338_10003036 Ga0265338_100030364 722
45 3300049586 Ga0501070_0000044 Ga0501070_0000044_99868_102201 722
46 3300053098 Ga0500650_0013351 Ga0500650_0013351_1066_3243 722
47 3300053142 Ga0500577_0002132 Ga0500577_0002132_1378_3555 722
48 3300005616 Ga0068852_100002346 Ga0068852_1000023463 723
49 iso_pu_bacteria 2585428094 2587863900 724
50 iso_pu_bacteria 2643221649 2644278757 724
51 3300048929 Ga0496126_0002608 Ga0496126_0002608_16085_18514 726
52 3300037312 Ga0395899_0002290 Ga0395899_0002290_1684_3918 729
53 3300049570 Ga0501033_0001321 Ga0501033_0001321_15628_17874 730
54 3300049579 Ga0501043_0063487 Ga0501043_0063487_104_2350 730
55 3300049823 Ga0501044_0108868 Ga0501044_0108868_464_2710 730
56 3300049571 Ga0501034_0000042 Ga0501034_0000042_127687_129921 731
57 3300049573 Ga0501037_0027794 Ga0501037_0027794_1375_3609 731
58 3300048929 Ga0496126_0000006 Ga0496126_0000006_29538_31886 732
59 3300006051 Ga0075364_10001652 Ga0075364_100016523 734
60 3300006186 Ga0075369_10007545 Ga0075369_100075452 734
61 3300048922 Ga0496119_0011001 Ga0496119_0011001_3463_5763 737
62 iso_pu_bacteria 2852643534 2852644732 738
63 3300005614 Ga0068856_100007115 Ga0068856_1000071155 739
64 3300025230 Ga0209563_100948 Ga0209563_1009482 739
65 3300048917 Ga0496114_0052320 Ga0496114_0052320_627_2999 739
66 3300048920 Ga0496117_0025494 Ga0496117_0025494_884_3325 740
67 3300049571 Ga0501034_0033657 Ga0501034_0033657_482_2740 741
68 3300002067 JGI24735J21928_10006773 JGI24735J21928_100067732 742
69 3300003578 Ga0006562J51391_1123486 Ga0006562J51391_11234863 742
70 3300026142 Ga0207698_10000255 Ga0207698_1000025516 744
71 iso_pu_bacteria 2835188231 2835190843 744
72 3300031649 Ga0307514_10004259 Ga0307514_1000425914 745
73 iso_pu_bacteria 2593339131 2595090103 745
74 3300006038 Ga0075365_10006625 Ga0075365_100066251 746
75 3300006051 Ga0075364_10000355 Ga0075364_1000035512 746
76 3300050491 nmdc:mga00v17_443_c1 nmdc:mga00v17_443_c1_10883_13141 746
77 3300050492 nmdc:mga0yw44_4376_c1 nmdc:mga0yw44_4376_c1_4077_6335 746
78 3300048920 Ga0496117_0000071 Ga0496117_0000071_215735_218176 747
79 iso_pu_bacteria 8055037949 8055038817 747
80 3300003762 Ga0055542_1002587 Ga0055542_10025876 749
81 iso_pu_bacteria 2643221632 2644183692 749
82 iso_pu_bacteria 2904497146 2904500635 749
83 3300049569 Ga0501032_0001564 Ga0501032_0001564_2153_4564 751
84 3300005535 Ga0070684_100001879 Ga0070684_10000187914 752
85 3300013105 Ga0157369_10001256 Ga0157369_1000125618 752
86 3300053140 Ga0500573_0033241 Ga0500573_0033241_54_2342 752
87 iso_pu_bacteria 2884763398 2884764567 752
88 iso_pu_bacteria 2939660829 2939662350 752
89 3300003323 rootH1_10052821 rootH1_100528215 753
90 3300005328 Ga0070676_10010181 Ga0070676_100101813 753
91 3300005335 Ga0070666_10048405 Ga0070666_100484051 753
92 3300005364 Ga0070673_100047968 Ga0070673_1000479682 753
93 3300005367 Ga0070667_100008757 Ga0070667_1000087574 753
94 3300009098 Ga0105245_10026848 Ga0105245_100268482 753
95 3300009148 Ga0105243_10047117 Ga0105243_100471172 753
96 3300013308 Ga0157375_10052424 Ga0157375_100524242 753
97 3300025315 Ga0207697_10007355 Ga0207697_100073553 753
98 3300025728 Ga0207655_1013787 Ga0207655_10137872 753
99 3300025907 Ga0207645_10000233 Ga0207645_1000023338 753
100 3300025940 Ga0207691_10002657 Ga0207691_1000265712 753
101 3300025986 Ga0207658_10010496 Ga0207658_100104963 753
102 3300026121 Ga0207683_10006385 Ga0207683_100063857 753
103 3300046459 Ga0495629_0048573 Ga0495629_0048573_55_2400 753
104 3300046543 Ga0495645_0001027 Ga0495645_0001027_16534_18879 753
105 3300046559 Ga0495667_0000575 Ga0495667_0000575_20297_22642 753
106 3300046691 Ga0495670_0000799 Ga0495670_0000799_12183_14528 753
107 3300047445 Ga0495677_0008903 Ga0495677_0008903_1129_3474 753
108 3300048905 Ga0496102_0020958 Ga0496102_0020958_564_2909 753
109 3300048913 Ga0496110_0013811 Ga0496110_0013811_2848_5193 753
110 3300048921 Ga0496118_0002488 Ga0496118_0002488_10124_12466 753
111 3300048922 Ga0496119_0003802 Ga0496119_0003802_12249_14591 753
112 3300048923 Ga0496120_0003534 Ga0496120_0003534_10016_12358 753
113 3300048925 Ga0496122_0000022 Ga0496122_0000022_383670_386012 753
114 3300048926 Ga0496123_0000016 Ga0496123_0000016_419153_421495 753
115 3300048927 Ga0496124_0004503 Ga0496124_0004503_1492_3834 753
116 3300048928 Ga0496125_0006681 Ga0496125_0006681_2654_4996 753
117 3300053140 Ga0500573_0030458 Ga0500573_0030458_183_2501 753
118 iso_pu_bacteria 2808606700 2810362807 753
119 iso_pu_bacteria 2870622029 2870625251 753
120 iso_pu_bacteria 2946003308 2946006681 753
121 iso_pu_bacteria 2964326757 2964326989 753
122 3300002772 JGI25164J39214_1000300 JGI25164J39214_10003007 754
123 3300003214 JGI25165J46597_1000044 JGI25165J46597_100004431 754
124 3300025231 Ga0207427_100126 Ga0207427_10012668 754
125 3300025233 Ga0209437_100615 Ga0209437_10061515 754
126 3300025261 Ga0209233_1000014 Ga0209233_100001430 754
127 3300037471 Ga0395905_0002040 Ga0395905_0002040_11961_14270 754
128 3300048926 Ga0496123_0006310 Ga0496123_0006310_7638_10187 754
129 3300049571 Ga0501034_0016162 Ga0501034_0016162_3950_6253 754
130 3300049574 Ga0501038_0054166 Ga0501038_0054166_293_2596 754
131 3300049575 Ga0501039_0003494 Ga0501039_0003494_7639_9942 754
132 3300049579 Ga0501043_0034892 Ga0501043_0034892_671_2974 754
133 3300049580 Ga0501046_0015175 Ga0501046_0015175_3222_5525 754
134 3300049824 Ga0501045_0019102 Ga0501045_0019102_2008_4311 754
135 iso_pu_bacteria 2844841374 2844841649 754
136 iso_pu_bacteria 2919055335 2919057310 754
137 iso_pu_bacteria 2919523602 2919523653 754
138 iso_pu_bacteria 2928153084 2928155081 754
139 3300005544 Ga0070686_100011318 Ga0070686_1000113183 755
140 3300009177 Ga0105248_10118045 Ga0105248_101180452 755
141 3300049570 Ga0501033_0077629 Ga0501033_0077629_29_2353 755
142 3300049571 Ga0501034_0004231 Ga0501034_0004231_5755_8079 755
143 3300049581 Ga0501047_0026143 Ga0501047_0026143_1575_3899 755
144 3300049586 Ga0501070_0056982 Ga0501070_0056982_730_3054 755
145 3300049823 Ga0501044_0026759 Ga0501044_0026759_2355_4679 755
146 3300053140 Ga0500573_0003240 Ga0500573_0003240_3334_5625 755
147 3300003752 Ga0055539_1000027 Ga0055539_100002738 756
148 3300003756 Ga0055533_1000020 Ga0055533_100002038 756
149 3300025225 Ga0209566_100257 Ga0209566_10025736 756
150 3300025226 Ga0209674_100001 Ga0209674_1000013860 756
151 3300025230 Ga0209563_100001 Ga0209563_1000013860 756
152 3300025253 Ga0209677_100001 Ga0209677_1000013860 756
153 3300053087 Ga0500643_000102 Ga0500643_000102_58965_61283 756
154 3300053136 Ga0500559_0001482 Ga0500559_0001482_2910_5201 756
155 3300053139 Ga0500568_0001971 Ga0500568_0001971_2735_5017 756
156 3300053153 Ga0500616_0000010 Ga0500616_0000010_599587_602010 756
157 iso_pu_bacteria 2643221616 2644095175 756
158 3300006038 Ga0075365_10004437 Ga0075365_100044372 757
159 3300009174 Ga0105241_10000854 Ga0105241_1000085418 757
160 3300025911 Ga0207654_10005352 Ga0207654_100053524 757
161 3300050492 nmdc:mga0yw44_716_c1 nmdc:mga0yw44_716_c1_354_2642 757
162 3300053140 Ga0500573_0003715 Ga0500573_0003715_3955_6258 757
163 iso_pu_bacteria 2643221572 2643874897 757
164 iso_pu_bacteria 2643221669 2644381953 757
165 iso_pu_bacteria 2895660088 2895660991 757
166 iso_pu_bacteria 8057345674 8057346367 757
167 3300005614 Ga0068856_100000200 Ga0068856_10000020060 758
168 3300010375 Ga0105239_10000411 Ga0105239_1000041160 758
169 3300026078 Ga0207702_10000057 Ga0207702_10000057152 758
170 3300037312 Ga0395899_0049907 Ga0395899_0049907_170_2452 758
171 3300037418 Ga0395900_0000001 Ga0395900_0000001_221464_223746 758
172 3300037466 Ga0395898_0000002 Ga0395898_0000002_882260_884542 758
173 3300038443 Ga0395901_0000060 Ga0395901_0000060_13951_16233 758
174 3300053080 Ga0500635_0000027 Ga0500635_0000027_54276_56612 758
175 3300005530 Ga0070679_100087214 Ga0070679_1000872142 759
176 3300005548 Ga0070665_100046647 Ga0070665_1000466472 759
177 3300028379 Ga0268266_10030213 Ga0268266_100302132 759
178 3300053140 Ga0500573_0008104 Ga0500573_0008104_1364_3835 759
179 3300005548 Ga0070665_100058160 Ga0070665_1000581602 762
180 3300028379 Ga0268266_10042262 Ga0268266_100422622 762
181 3300013105 Ga0157369_10000376 Ga0157369_1000037632 763
182 3300005563 Ga0068855_100000107 Ga0068855_10000010722 764
183 3300009093 Ga0105240_10000571 Ga0105240_1000057133 764
184 3300025913 Ga0207695_10001429 Ga0207695_100014293 764
185 3300025949 Ga0207667_10000128 Ga0207667_10000128103 764
186 3300044842 Ga0466957_0031623 Ga0466957_0031623_137_2587 764
187 3300005530 Ga0070679_100022793 Ga0070679_1000227934 765
188 3300025921 Ga0207652_10015608 Ga0207652_100156084 765
189 3300028800 Ga0265338_10009920 Ga0265338_100099202 765
190 3300053108 Ga0500562_000002 Ga0500562_000002_485440_487785 765
191 3300001979 JGI24740J21852_10000923 JGI24740J21852_100009232 766
192 3300001990 JGI24737J22298_10000194 JGI24737J22298_100001945 766
193 3300002067 JGI24735J21928_10000054 JGI24735J21928_100000543 766
194 3300003322 rootL2_10069339 rootL2_100693394 766
195 3300005327 Ga0070658_10000063 Ga0070658_1000006343 766
196 3300005344 Ga0070661_100013691 Ga0070661_1000136916 766
197 3300005366 Ga0070659_100006637 Ga0070659_1000066375 766
198 3300005614 Ga0068856_100000018 Ga0068856_10000001853 766
199 3300005616 Ga0068852_100000089 Ga0068852_1000000898 766
200 3300009098 Ga0105245_10076164 Ga0105245_100761642 766
201 3300011119 Ga0105246_10002109 Ga0105246_100021098 766
202 3300011119 Ga0105246_10010197 Ga0105246_100101972 766
203 3300013100 Ga0157373_10013504 Ga0157373_100135044 766
204 3300013102 Ga0157371_10001166 Ga0157371_1000116621 766
205 3300013104 Ga0157370_10002562 Ga0157370_1000256215 766
206 3300013104 Ga0157370_10014796 Ga0157370_100147968 766
207 3300013105 Ga0157369_10000466 Ga0157369_1000046617 766
208 3300013105 Ga0157369_10000752 Ga0157369_1000075224 766
209 3300014745 Ga0157377_10000314 Ga0157377_1000031416 766
210 3300014969 Ga0157376_10000035 Ga0157376_10000035120 766
211 3300025904 Ga0207647_10003632 Ga0207647_100036323 766
212 3300025909 Ga0207705_10000093 Ga0207705_1000009343 766
213 3300025919 Ga0207657_10001943 Ga0207657_1000194313 766
214 3300025933 Ga0207706_10000209 Ga0207706_1000020947 766
215 3300026078 Ga0207702_10000179 Ga0207702_1000017934 766
216 3300026142 Ga0207698_10000122 Ga0207698_100001228 766
217 3300030733 Ga0314311_1244400 Ga0314311_12444003 766
218 3300030734 Ga0316179_1065319 Ga0316179_106531917 766
219 3300030742 Ga0316183_1071450 Ga0316183_107145018 766
220 3300030745 Ga0316182_1174161 Ga0316182_11741611 766
221 3300042439 Ga0439464_0000411 Ga0439464_0000411_1018_3318 766
222 3300050491 nmdc:mga00v17_13912_c1 nmdc:mga00v17_13912_c1_689_2989 766
223 3300050496 nmdc:mga07m45_2607_c1 nmdc:mga07m45_2607_c1_4435_6735 766
224 3300053087 Ga0500643_003908 Ga0500643_003908_2563_4866 766
225 3300053724 Ga0500570_001369 Ga0500570_001369_7625_9928 766

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13632

Glyco_trans_2_3

Glycosyl transferase family group 2

443

669

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vxm-assembly2.cif.gz_B screening a limited structure-based library identifies udp-galnac- specific mutants of alpha-1,3 galactosyltransferase 0.7769 111 163
2rj6-assembly1.cif.gz_A b-specific alpha-1,3-galactosyltransferase g176r s235g mutant (aabb) + h-antigen disaccharide 0.7713 110 162
3i0c-assembly1.cif.gz_A-2 crystal structure of gtb c80s/c196s unliganded 0.7698 110 162
5c4c-assembly1.cif.gz_A-2 crystal structure of abbb + udp-glc + di 0.7694 110 162
5c38-assembly1.cif.gz_A-2 crystal structure of aabb + udp-c-gal + di 0.7691 110 162
ID Description Score Start End Superfamily
af_Q9U720_578_744_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8337 357 498 3.90.550.10
af_Q9RQP9_29_257_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7953 121 501 3.90.550.10
af_P37653_262_483_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7889 107 497 3.90.550.10
af_P37653_262_483_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7856 107 497 3.90.550.10
2o1hA00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7665 110 162 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A564VP22-F1-model_v4 deleted 0.9892 28 705
AF-A0A3D1ZYB3-F1-model_v4 Glycosyltransferase 0.9861 28 519 GO:0005886
GO:0016758
AF-A0A564VP22-F1-model_v4 deleted 0.9834 28 705
AF-A0A3D1ZYB3-F1-model_v4 Glycosyltransferase 0.9782 28 519 GO:0005886
GO:0016758
AF-A0A1F6R765-F1-model_v4 Glycosyltransferase 0.9762 1 582 GO:0005886
GO:0016758

Feature Viewer

pLDDT pTM Quality
86.39 0.85 High
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Predicted Structure (AlphaFold2)

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