F337476

General Info

Members Datasets Scaffolds Average Seq Length
225 182 201 680

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100008287|Ga0070671_1000082877
Length 729
Sequence MQRRFARACGPRRRPGFQYELPATLLRHDLDDSLLPEHVPAALRTARRWRRALLWAALVGLLVVAQTLLIALTARHERNRLQEQTDGSAVASAGDVKQVFARDLQGLQALLWREPTPQQWARDAAVLLRDHPEMLRVEVRTPQQGILQALDTPYRRGPFSTIAREDIDLETEVACNAATRLNGAVWSHSYFVPQGDGVGAEVVDVCLPMSLQGQRTGYMAASVDLRAVLDTGVATDILRQYELSFVEGDGTRLARAGVPRGAGVYVSERLVDLQGVTLALKVDNSRGEPGLIPNVATALVIGLSFMLAGLVFLLVRDVRRRAQAESRLAQELTLRRAMENSLVTGLRARDLQGRITYVNPAFCDMVGFAPGDLLGQDVPPYWPPEFRNEYRARQARRHAGNAPPREGFESIFVNAGGERFPVMVYEAPLIGVDGQQTGWMSAVLDLSAQRRVEELSRQQQERLQATARLATVGEMASLLGHELNQPLAAIASFATGSLNLIGADGHAPDAQMLPMLREAIARIAEQAERAGRVIKSVHDFVRRREQHREAISVDQLVEAVMPLVRLQARKSSTRVDLDLPKPSPRVACDRTMVEQVLLNLTRNAMQAMEGLDAAERLLTLRVRVHGDASLERVSFSVIDRGPGISDTVAAQLFTPFFTTRSEGMGLGLSLCRTVAEQHGGALEYENVRDLDGRTLGAEFRFSLPTPRSSARVAPDGLRAASQQTSGLPS

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
6 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
7 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
8 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
9 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
10 2643221658 Variovorax sp. Root411 Isolate Unclassified
11 2643221660 Methylibium sp. Root1272 Isolate Unclassified
12 2738541277 Variovorax sp. GV051 Isolate Unclassified
13 2738541307 Variovorax sp. GV008 Isolate Unclassified
14 2738543019 Variovorax sp. GV040 Isolate Unclassified
15 2842677519 Variovorax sp. R-72495 Isolate Unclassified
16 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
17 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
18 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
19 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
20 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
21 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
22 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
23 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
24 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
25 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
26 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
27 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
28 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
29 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
30 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
31 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
32 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
33 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
34 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
35 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
36 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
37 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
38 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
39 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
40 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
41 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
42 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
43 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
44 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
45 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
46 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
47 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
51 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
55 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
56 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
62 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
75 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
76 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
79 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
115 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
116 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
117 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
118 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
119 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
120 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
121 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
122 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
123 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
124 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
125 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
126 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
127 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
128 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
129 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
130 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
131 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
132 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
133 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
134 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
140 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
141 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
142 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
143 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
144 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
145 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
146 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
147 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
148 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
149 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
150 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
151 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
152 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
153 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
154 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
166 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
167 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
168 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
175 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
176 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
177 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
178 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
179 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
180 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0.44
Isolates 10.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.67
Nodule 1.78
Rhizoplane 1.78
Rhizosphere 59.11
Stem 0
Stem Tuber 0
Unclassified 14.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10002519 3300003215 Bacteria 10517
2 JGI25153J46596_10008650 3300003215 Bacteria 4838
3 Ga0006562J51391_1058358 3300003578 Bacteria 7110
4 Ga0055526_1005045 3300003771 Bacteria 7710
5 Ga0055537_1000137 3300003773 Bacteria 54996
6 Ga0055524_1000033 3300003775 Bacteria 180833
7 Ga0055534_1000118 3300003784 Bacteria 58554
8 Ga0055528_1000152 3300003790 Bacteria 57369
9 Ga0055530_10003438 3300003791 Bacteria 9000
10 Ga0055540_1000184 3300003792 Bacteria 60646
11 Ga0055540_1001728 3300003792 Bacteria 12564
12 Ga0070676_10022472 3300005328 Bacteria 3537
13 Ga0070670_100050724 3300005331 Bacteria 3565
14 Ga0068869_100035005 3300005334 Bacteria 3557
15 Ga0068868_100018528 3300005338 Bacteria 5206
16 Ga0068868_100072068 3300005338 Bacteria 2756
17 Ga0070661_100002070 3300005344 Bacteria 13804
18 Ga0070669_100016212 3300005353 Bacteria 5314
19 Ga0070675_100052117 3300005354 Bacteria 3363
20 Ga0070671_100008287 3300005355 Bacteria 8315
21 Ga0070671_100038518 3300005355 Bacteria 3968
22 Ga0070671_100051774 3300005355 Bacteria 3415
23 Ga0070674_100014694 3300005356 Bacteria 4870
24 Ga0070673_100002966 3300005364 Bacteria 10466
25 Ga0070663_100000177 3300005455 Bacteria 32482
26 Ga0070678_100034300 3300005456 Bacteria 3532
27 Ga0068867_100000279 3300005459 Bacteria 33713
28 Ga0068867_100007596 3300005459 Bacteria 7669
29 Ga0068867_100041419 3300005459 Bacteria 3366
30 Ga0070672_100020087 3300005543 Bacteria 4866
31 Ga0070672_100043991 3300005543 Bacteria 3447
32 Ga0070665_100032458 3300005548 Bacteria 5255
33 Ga0068855_100015273 3300005563 Bacteria 9243
34 Ga0070664_100004129 3300005564 Bacteria 11663
35 Ga0068857_100031355 3300005577 Bacteria 4696
36 Ga0068859_100056532 3300005617 Bacteria 3950
37 Ga0068863_100008325 3300005841 Bacteria 10131
38 Ga0075365_10040833 3300006038 Bacteria 3027
39 Ga0075363_100002936 3300006048 Bacteria 7107
40 Ga0075362_10010620 3300006177 Bacteria 3602
41 Ga0075366_10001573 3300006195 Bacteria 11415
42 Ga0075366_10023210 3300006195 Bacteria 3614
43 Ga0075370_10001072 3300006353 Bacteria 11389
44 Ga0075370_10006277 3300006353 Bacteria 5968
45 Ga0075370_10062840 3300006353 Bacteria 2116
46 Ga0068865_100070335 3300006881 Bacteria 2479
47 Ga0097620_100056530 3300006931 Bacteria 3950
48 Ga0079104_1000009 3300006946 Bacteria 367015
49 Ga0099826_10000746 3300006948 Bacteria 17106
50 Ga0105240_10000602 3300009093 Bacteria 66714
51 Ga0114129_10088404 3300009147 Bacteria 4295
52 Ga0105243_10000513 3300009148 Bacteria 39564
53 Ga0105248_10000345 3300009177 Bacteria 54458
54 Ga0105237_10000372 3300009545 Bacteria 63675
55 Ga0105237_10098905 3300009545 Bacteria 2908
56 Ga0105238_10021064 3300009551 Bacteria 6643
57 Ga0105239_10000623 3300010375 Bacteria 50370
58 Ga0157373_10032060 3300013100 Bacteria 3783
59 Ga0157375_10104694 3300013308 Bacteria 2919
60 Ga0182008_10000871 3300014497 Bacteria 20984
61 Ga0157377_10000006 3300014745 Bacteria 419853
62 Ga0207425_1001448 3300025245 Bacteria 9912
63 Ga0209129_1000309 3300025258 Bacteria 44354
64 Ga0209565_1000262 3300025263 Bacteria 55325
65 Ga0209673_1000286 3300025273 Bacteria 94581
66 Ga0209673_1013522 3300025273 Bacteria 3214
67 Ga0209130_1002607 3300025284 Bacteria 8730
68 Ga0209675_1000164 3300025291 Bacteria 81617
69 Ga0209676_1013881 3300025292 Bacteria 3068
70 Ga0209025_1000637 3300025294 Bacteria 62014
71 Ga0209564_1000162 3300025295 Bacteria 162265
72 Ga0209758_1000152 3300025297 Bacteria 162418
73 Ga0209758_1000969 3300025297 Bacteria 38697
74 Ga0209050_1000202 3300025298 Bacteria 133468
75 Ga0209050_1001724 3300025298 Bacteria 21768
76 Ga0209050_1015093 3300025298 Bacteria 3273
77 Ga0209256_1000019 3300025299 Bacteria 558627
78 Ga0209051_1000004 3300025303 Bacteria 1155596
79 Ga0209257_1000038 3300025304 Bacteria 609032
80 Ga0209257_1000044 3300025304 Bacteria 486709
81 Ga0207682_10006026 3300025893 Bacteria 4902
82 Ga0207645_10009502 3300025907 Bacteria 6722
83 Ga0207643_10034024 3300025908 Bacteria 2854
84 Ga0207695_10006330 3300025913 Bacteria 15399
85 Ga0207671_10002794 3300025914 Bacteria 18202
86 Ga0207649_10002913 3300025920 Bacteria 9423
87 Ga0207681_10031448 3300025923 Bacteria 3466
88 Ga0207694_10004873 3300025924 Bacteria 10422
89 Ga0207650_10039834 3300025925 Bacteria 3435
90 Ga0207659_10001776 3300025926 Bacteria 12728
91 Ga0207687_10038468 3300025927 Bacteria 3270
92 Ga0207644_10016216 3300025931 Bacteria 5013
93 Ga0207644_10048408 3300025931 Bacteria 3039
94 Ga0207709_10000398 3300025935 Bacteria 42657
95 Ga0207669_10001977 3300025937 Bacteria 8691
96 Ga0207691_10006899 3300025940 Bacteria 10953
97 Ga0207691_10010898 3300025940 Bacteria 8724
98 Ga0207711_10013649 3300025941 Bacteria 6747
99 Ga0207679_10001298 3300025945 Bacteria 15795
100 Ga0207667_10018251 3300025949 Bacteria 7874
101 Ga0207651_10005996 3300025960 Bacteria 6302
102 Ga0207640_10056578 3300025981 Bacteria 2576
103 Ga0207677_10013278 3300026023 Bacteria 4767
104 Ga0207677_10030066 3300026023 Bacteria 3462
105 Ga0207678_10000060 3300026067 Bacteria 85708
106 Ga0207648_10000873 3300026089 Bacteria 33984
107 Ga0207648_10004697 3300026089 Bacteria 13967
108 Ga0207648_10016965 3300026089 Bacteria 6636
109 Ga0207648_10028501 3300026089 Bacteria 4949
110 Ga0207674_10017002 3300026116 Bacteria 7942
111 Ga0207683_10059473 3300026121 Bacteria 3357
112 Ga0207698_10020341 3300026142 Bacteria 4567
113 Ga0209281_1000023 3300027111 Bacteria 519955
114 Ga0209282_1008697 3300027666 Bacteria 6408
115 Ga0307517_10000058 3300028786 Bacteria 148725
116 Ga0307515_10000123 3300028794 Bacteria 186601
117 Ga0307515_10000870 3300028794 Bacteria 69361
118 Ga0307515_10001602 3300028794 Bacteria 50484
119 Ga0307515_10001649 3300028794 Bacteria 49654
120 Ga0307515_10033255 3300028794 Bacteria 8499
121 Ga0307512_10021366 3300030522 Bacteria 5838
122 Ga0316176_1044658 3300030732 Bacteria 4805
123 Ga0314311_1015200 3300030733 Bacteria 7232
124 Ga0265332_10003849 3300031238 Bacteria 7166
125 Ga0265328_10004820 3300031239 Bacteria 5818
126 Ga0265329_10018994 3300031242 Bacteria 2342
127 Ga0265331_10011316 3300031250 Bacteria 4890
128 Ga0265327_10000444 3300031251 Bacteria 74908
129 Ga0307513_10009706 3300031456 Bacteria 12159
130 Ga0307513_10031976 3300031456 Bacteria 5945
131 Ga0307513_10051604 3300031456 Bacteria 4435
132 Ga0307509_10082977 3300031507 Bacteria 3304
133 Ga0307408_100064531 3300031548 Bacteria 2682
134 Ga0307508_10000280 3300031616 Bacteria 62637
135 Ga0307508_10001441 3300031616 Bacteria 26778
136 Ga0307508_10003701 3300031616 Bacteria 15323
137 Ga0307514_10003525 3300031649 Bacteria 14959
138 Ga0307514_10016665 3300031649 Bacteria 6054
139 Ga0307514_10066788 3300031649 Bacteria 2718
140 Ga0265314_10000882 3300031711 Bacteria 35754
141 Ga0307516_10001769 3300031730 Bacteria 29705
142 Ga0307516_10011524 3300031730 Bacteria 9596
143 Ga0307405_10000929 3300031731 Bacteria 11657
144 Ga0307406_10004096 3300031901 Bacteria 7935
145 Ga0307412_10015177 3300031911 Bacteria 4558
146 Ga0307412_10073522 3300031911 Bacteria 2339
147 Ga0307411_10003008 3300032005 Bacteria 7681
148 Ga0373931_0013559 3300035691 Bacteria 3971
149 Ga0395905_0038256 3300037471 Bacteria 4501
150 Ga0439431_0005186 3300041997 Bacteria 2872
151 Ga0450919_000985 3300042121 Bacteria 3692
152 Ga0450906_000621 3300042145 Bacteria 7580
153 Ga0450910_000694 3300042147 Bacteria 4042
154 Ga0439434_0001123 3300042435 Bacteria 7738
155 Ga0450918_000030 3300042531 Bacteria 29656
156 Ga0450893_0002092 3300042532 Bacteria 3107
157 Ga0451577_0006861 3300042876 Bacteria 11267
158 Ga0451577_0009495 3300042876 Bacteria 9361
159 Ga0451577_0025518 3300042876 Bacteria 5360
160 Ga0466961_0011579 3300044693 Bacteria 5638
161 Ga0453684_0022840 3300044712 Bacteria 9259
162 Ga0466971_0007883 3300044719 Bacteria 4638
163 Ga0466970_0045346 3300044765 Bacteria 2341
164 Ga0451576_0071836 3300045051 Bacteria 3602
165 Ga0495610_0018788 3300046512 Bacteria 3888
166 Ga0495654_0000854 3300046530 Bacteria 23052
167 Ga0495621_0006103 3300046539 Bacteria 3501
168 Ga0495625_0000644 3300046660 Bacteria 50280
169 Ga0495593_0048056 3300047673 Bacteria 2268
170 Ga0496102_0004617 3300048905 Bacteria 11657
171 Ga0496102_0011557 3300048905 Bacteria 7617
172 Ga0496112_0047388 3300048915 Bacteria 4216
173 Ga0496114_0006686 3300048917 Bacteria 9083
174 Ga0496122_0030745 3300048925 Bacteria 4490
175 Ga0501043_0000018 3300049579 Bacteria 161101
176 Ga0501046_0000042 3300049580 Bacteria 151850
177 Ga0501047_0000052 3300049581 Bacteria 153448
178 Ga0501048_0000099 3300049582 Bacteria 47309
179 Ga0501198_000033 3300049649 Bacteria 56683
180 Ga0501222_000016 3300049662 Bacteria 80046
181 Ga0501222_003420 3300049662 Bacteria 2169
182 Ga0501267_000253 3300049764 Bacteria 3845
183 Ga0501272_001013 3300049769 Bacteria 2585
184 Ga0501044_0184159 3300049823 Bacteria 2054
185 Ga0501045_0005022 3300049824 Bacteria 9168
186 nmdc:mga0k408_2030_c1 3300050493 Bacteria 10833
187 nmdc:mga0k408_21517_c1 3300050493 Bacteria 3623
188 nmdc:mga0k408_24248_c1 3300050493 Bacteria 3428
189 nmdc:mga0k408_2761_c1 3300050493 Bacteria 5696
190 nmdc:mga07m45_1054_c1 3300050496 Bacteria 12280
191 nmdc:mga07m45_66885_c1 3300050496 Bacteria 2042
192 nmdc:mga09592_13569_c1 3300050508 Bacteria 6655
193 Ga0500578_0000028 3300053086 Bacteria 144081
194 Ga0500651_0003948 3300053093 Bacteria 8221
195 Ga0500593_000143 3300053117 Bacteria 28662
196 Ga0500618_009713 3300053125 Bacteria 2616
197 Ga0500652_000913 3300053131 Bacteria 9744
198 Ga0500590_004620 3300053148 Bacteria 6525
199 Ga0500619_000121 3300053154 Bacteria 20412
200 Ga0500622_0000300 3300053156 Bacteria 50701
201 Ga0466962_0035953 3300061719 Bacteria 2370

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0184159 Ga0501044_0184159_12_1802 553
2 3300006177 Ga0075362_10010620 Ga0075362_100106201 569
3 3300041997 Ga0439431_0005186 Ga0439431_0005186_27_2081 581
4 3300046539 Ga0495621_0006103 Ga0495621_0006103_927_3095 590
5 3300037471 Ga0395905_0038256 Ga0395905_0038256_2250_4313 608
6 3300031911 Ga0307412_10073522 Ga0307412_100735222 614
7 3300044693 Ga0466961_0011579 Ga0466961_0011579_1113_3092 615
8 3300044719 Ga0466971_0007883 Ga0466971_0007883_459_2438 615
9 3300044765 Ga0466970_0045346 Ga0466970_0045346_67_2046 615
10 3300050493 nmdc:mga0k408_21517_c1 nmdc:mga0k408_21517_c1_11_1990 615
11 3300061719 Ga0466962_0035953 Ga0466962_0035953_132_2111 615
12 3300031456 Ga0307513_10009706 Ga0307513_100097067 620
13 3300050493 nmdc:mga0k408_2030_c1 nmdc:mga0k408_2030_c1_8081_10105 620
14 3300014497 Ga0182008_10000871 Ga0182008_100008718 621
15 3300031456 Ga0307513_10031976 Ga0307513_100319762 623
16 3300006048 Ga0075363_100002936 Ga0075363_1000029363 624
17 3300006353 Ga0075370_10001072 Ga0075370_100010724 624
18 3300025292 Ga0209676_1013881 Ga0209676_10138812 625
19 3300049662 Ga0501222_003420 Ga0501222_003420_208_2154 625
20 3300005543 Ga0070672_100020087 Ga0070672_1000200875 628
21 3300003773 Ga0055537_1000137 Ga0055537_100013738 629
22 3300003784 Ga0055534_1000118 Ga0055534_100011838 629
23 3300003790 Ga0055528_1000152 Ga0055528_100015236 629
24 3300006948 Ga0099826_10000746 Ga0099826_100007469 629
25 3300025263 Ga0209565_1000262 Ga0209565_10002629 629
26 3300025273 Ga0209673_1000286 Ga0209673_100028633 629
27 3300025291 Ga0209675_1000164 Ga0209675_100016433 629
28 3300027666 Ga0209282_1008697 Ga0209282_10086972 629
29 3300042147 Ga0450910_000694 Ga0450910_000694_728_2776 629
30 3300042435 Ga0439434_0001123 Ga0439434_0001123_5206_7254 629
31 3300025893 Ga0207682_10006026 Ga0207682_100060262 631
32 3300025294 Ga0209025_1000637 Ga0209025_100063710 632
33 3300028794 Ga0307515_10000123 Ga0307515_1000012357 632
34 3300030522 Ga0307512_10021366 Ga0307512_100213665 632
35 3300048925 Ga0496122_0030745 Ga0496122_0030745_1659_3740 633
36 3300025981 Ga0207640_10056578 Ga0207640_100565782 634
37 3300006353 Ga0075370_10006277 Ga0075370_100062772 635
38 3300031548 Ga0307408_100064531 Ga0307408_1000645312 635
39 3300050496 nmdc:mga07m45_1054_c1 nmdc:mga07m45_1054_c1_6782_8887 635
40 3300031649 Ga0307514_10016665 Ga0307514_100166652 636
41 3300028786 Ga0307517_10000058 Ga0307517_1000005870 637
42 3300031649 Ga0307514_10066788 Ga0307514_100667882 638
43 3300053125 Ga0500618_009713 Ga0500618_009713_284_2326 639
44 3300031616 Ga0307508_10001441 Ga0307508_1000144125 640
45 3300042876 Ga0451577_0009495 Ga0451577_0009495_6504_8579 640
46 3300042876 Ga0451577_0025518 Ga0451577_0025518_1397_3511 640
47 3300045051 Ga0451576_0071836 Ga0451576_0071836_184_2298 640
48 3300048905 Ga0496102_0004617 Ga0496102_0004617_6190_8271 640
49 3300031730 Ga0307516_10001769 Ga0307516_1000176921 641
50 3300046660 Ga0495625_0000644 Ga0495625_0000644_45913_47928 641
51 3300031456 Ga0307513_10051604 Ga0307513_100516042 642
52 3300042532 Ga0450893_0002092 Ga0450893_0002092_505_2583 642
53 3300050508 nmdc:mga09592_13569_c1 nmdc:mga09592_13569_c1_812_2920 642
54 3300005564 Ga0070664_100004129 Ga0070664_1000041297 644
55 3300025920 Ga0207649_10002913 Ga0207649_100029136 644
56 3300025945 Ga0207679_10001298 Ga0207679_100012983 644
57 3300035691 Ga0373931_0013559 Ga0373931_0013559_259_2289 644
58 3300046530 Ga0495654_0000854 Ga0495654_0000854_4752_6863 644
59 3300047673 Ga0495593_0048056 Ga0495593_0048056_149_2179 644
60 3300050493 nmdc:mga0k408_2761_c1 nmdc:mga0k408_2761_c1_2829_4859 644
61 iso_pu_bacteria 2954767861 2954769704 644
62 3300028794 Ga0307515_10033255 Ga0307515_100332551 645
63 3300050496 nmdc:mga07m45_66885_c1 nmdc:mga07m45_66885_c1_75_2030 645
64 3300005334 Ga0068869_100035005 Ga0068869_1000350052 646
65 3300005577 Ga0068857_100031355 Ga0068857_1000313553 646
66 3300006195 Ga0075366_10001573 Ga0075366_100015733 646
67 3300026116 Ga0207674_10017002 Ga0207674_100170025 646
68 iso_pu_bacteria 2842677519 2842678231 646
69 iso_pu_bacteria 2919462493 2919465610 646
70 iso_pu_bacteria 2945945610 2945950896 646
71 iso_pu_bacteria 2945972063 2945974467 646
72 3300049579 Ga0501043_0000018 Ga0501043_0000018_101839_103965 647
73 3300049580 Ga0501046_0000042 Ga0501046_0000042_101839_103965 647
74 3300049581 Ga0501047_0000052 Ga0501047_0000052_49484_51610 647
75 3300049582 Ga0501048_0000099 Ga0501048_0000099_29053_31179 647
76 3300049824 Ga0501045_0005022 Ga0501045_0005022_623_2749 647
77 iso_pu_bacteria 2585428062 2587758165 647
78 iso_pu_bacteria 2643221658 2644327111 647
79 iso_pu_bacteria 2738541277 2738721793 647
80 iso_pu_bacteria 2738543019 2739282157 647
81 3300049764 Ga0501267_000253 Ga0501267_000253_1140_3155 648
82 iso_pu_bacteria 2738541307 2738881965 648
83 iso_pu_bacteria 2945909444 2945915080 648
84 iso_pu_bacteria 2945984333 2945989510 648
85 3300003792 Ga0055540_1001728 Ga0055540_10017283 650
86 3300006038 Ga0075365_10040833 Ga0075365_100408331 650
87 3300030732 Ga0316176_1044658 Ga0316176_10446583 650
88 3300030733 Ga0314311_1015200 Ga0314311_10152003 650
89 3300031901 Ga0307406_10004096 Ga0307406_100040962 650
90 3300031911 Ga0307412_10015177 Ga0307412_100151772 650
91 3300042145 Ga0450906_000621 Ga0450906_000621_827_2875 650
92 3300053154 Ga0500619_000121 Ga0500619_000121_6198_8288 650
93 3300003578 Ga0006562J51391_1058358 Ga0006562J51391_10583584 651
94 3300005548 Ga0070665_100032458 Ga0070665_1000324584 651
95 3300025298 Ga0209050_1015093 Ga0209050_10150932 651
96 3300042876 Ga0451577_0006861 Ga0451577_0006861_8531_10564 651
97 3300005563 Ga0068855_100015273 Ga0068855_1000152738 652
98 3300009545 Ga0105237_10098905 Ga0105237_100989051 652
99 3300013100 Ga0157373_10032060 Ga0157373_100320602 652
100 3300025284 Ga0209130_1002607 Ga0209130_10026074 652
101 3300031238 Ga0265332_10003849 Ga0265332_100038493 652
102 3300031242 Ga0265329_10018994 Ga0265329_100189942 652
103 3300031711 Ga0265314_10000882 Ga0265314_1000088228 652
104 3300053093 Ga0500651_0003948 Ga0500651_0003948_2031_4007 652
105 3300053131 Ga0500652_000913 Ga0500652_000913_1600_3576 652
106 3300053156 Ga0500622_0000300 Ga0500622_0000300_29207_31183 652
107 iso_pu_bacteria 2904541872 2904542819 653
108 iso_pu_bacteria 2929160207 2929166239 653
109 3300031239 Ga0265328_10004820 Ga0265328_100048204 654
110 3300031250 Ga0265331_10011316 Ga0265331_100113163 654
111 3300031251 Ga0265327_10000444 Ga0265327_100004444 654
112 3300005364 Ga0070673_100002966 Ga0070673_1000029664 655
113 3300005459 Ga0068867_100007596 Ga0068867_1000075964 655
114 3300006881 Ga0068865_100070335 Ga0068865_1000703351 655
115 3300025298 Ga0209050_1000202 Ga0209050_100020236 655
116 3300025907 Ga0207645_10009502 Ga0207645_100095024 655
117 3300025931 Ga0207644_10016216 Ga0207644_100162164 655
118 3300025940 Ga0207691_10010898 Ga0207691_100108984 655
119 3300025960 Ga0207651_10005996 Ga0207651_100059963 655
120 3300026023 Ga0207677_10030066 Ga0207677_100300662 655
121 3300026089 Ga0207648_10004697 Ga0207648_100046974 655
122 3300053117 Ga0500593_000143 Ga0500593_000143_16488_18566 655
123 3300049769 Ga0501272_001013 Ga0501272_001013_227_2290 657
124 iso_pu_bacteria 2643221644 2644246603 658
125 3300005338 Ga0068868_100072068 Ga0068868_1000720682 660
126 3300005617 Ga0068859_100056532 Ga0068859_1000565322 660
127 3300005841 Ga0068863_100008325 Ga0068863_1000083256 660
128 3300006931 Ga0097620_100056530 Ga0097620_1000565302 660
129 3300025927 Ga0207687_10038468 Ga0207687_100384681 660
130 3300028794 Ga0307515_10001602 Ga0307515_1000160234 660
131 3300044712 Ga0453684_0022840 Ga0453684_0022840_6635_8722 660
132 iso_pu_bacteria 2928115317 2928116704 661
133 3300006195 Ga0075366_10023210 Ga0075366_100232102 662
134 3300026142 Ga0207698_10020341 Ga0207698_100203412 662
135 3300028794 Ga0307515_10000870 Ga0307515_1000087045 662
136 3300042121 Ga0450919_000985 Ga0450919_000985_934_2988 662
137 3300042531 Ga0450918_000030 Ga0450918_000030_13967_16021 662
138 3300046512 Ga0495610_0018788 Ga0495610_0018788_368_2449 662
139 3300050493 nmdc:mga0k408_24248_c1 nmdc:mga0k408_24248_c1_158_2251 662
140 3300028794 Ga0307515_10001649 Ga0307515_1000164926 663
141 3300031616 Ga0307508_10003701 Ga0307508_1000370111 663
142 3300031649 Ga0307514_10003525 Ga0307514_100035254 663
143 3300049649 Ga0501198_000033 Ga0501198_000033_25380_27473 663
144 3300049662 Ga0501222_000016 Ga0501222_000016_52584_54677 663
145 iso_pu_bacteria 2643221654 2644305402 663
146 3300003215 JGI25153J46596_10008650 JGI25153J46596_100086503 664
147 3300003771 Ga0055526_1005045 Ga0055526_10050453 664
148 3300025245 Ga0207425_1001448 Ga0207425_10014483 664
149 3300025258 Ga0209129_1000309 Ga0209129_100030926 664
150 3300025295 Ga0209564_1000162 Ga0209564_100016226 664
151 3300025297 Ga0209758_1000152 Ga0209758_1000152128 664
152 3300031507 Ga0307509_10082977 Ga0307509_100829772 664
153 3300031616 Ga0307508_10000280 Ga0307508_1000028065 664
154 3300005328 Ga0070676_10022472 Ga0070676_100224721 666
155 3300005331 Ga0070670_100050724 Ga0070670_1000507242 666
156 3300005338 Ga0068868_100018528 Ga0068868_1000185284 666
157 3300005353 Ga0070669_100016212 Ga0070669_1000162124 666
158 3300005354 Ga0070675_100052117 Ga0070675_1000521172 666
159 3300005355 Ga0070671_100038518 Ga0070671_1000385182 666
160 3300005355 Ga0070671_100051774 Ga0070671_1000517742 666
161 3300005356 Ga0070674_100014694 Ga0070674_1000146944 666
162 3300005456 Ga0070678_100034300 Ga0070678_1000343002 666
163 3300005459 Ga0068867_100041419 Ga0068867_1000414192 666
164 3300005543 Ga0070672_100043991 Ga0070672_1000439912 666
165 3300009147 Ga0114129_10088404 Ga0114129_100884043 666
166 3300013308 Ga0157375_10104694 Ga0157375_101046942 666
167 3300025908 Ga0207643_10034024 Ga0207643_100340242 666
168 3300025923 Ga0207681_10031448 Ga0207681_100314482 666
169 3300025925 Ga0207650_10039834 Ga0207650_100398342 666
170 3300025926 Ga0207659_10001776 Ga0207659_100017767 666
171 3300025937 Ga0207669_10001977 Ga0207669_100019772 666
172 3300025940 Ga0207691_10006899 Ga0207691_1000689912 666
173 3300026023 Ga0207677_10013278 Ga0207677_100132783 666
174 3300026089 Ga0207648_10016965 Ga0207648_100169656 666
175 3300026089 Ga0207648_10028501 Ga0207648_100285012 666
176 3300031731 Ga0307405_10000929 Ga0307405_100009294 666
177 3300032005 Ga0307411_10003008 Ga0307411_100030084 666
178 3300003775 Ga0055524_1000033 Ga0055524_1000033107 667
179 3300006946 Ga0079104_1000009 Ga0079104_1000009321 667
180 3300025299 Ga0209256_1000019 Ga0209256_1000019383 667
181 3300027111 Ga0209281_1000023 Ga0209281_100002366 667
182 3300031730 Ga0307516_10011524 Ga0307516_100115244 667
183 3300048917 Ga0496114_0006686 Ga0496114_0006686_6457_8526 667
184 3300005344 Ga0070661_100002070 Ga0070661_1000020709 668
185 3300005355 Ga0070671_100008287 Ga0070671_1000082877 668
186 3300005455 Ga0070663_100000177 Ga0070663_1000001779 668
187 3300009177 Ga0105248_10000345 Ga0105248_1000034538 668
188 3300025931 Ga0207644_10048408 Ga0207644_100484082 668
189 3300025941 Ga0207711_10013649 Ga0207711_100136492 668
190 3300026067 Ga0207678_10000060 Ga0207678_1000006018 668
191 3300048915 Ga0496112_0047388 Ga0496112_0047388_1071_3173 668
192 iso_pu_bacteria 2643221660 2644339729 668
193 3300005459 Ga0068867_100000279 Ga0068867_10000027920 669
194 3300009093 Ga0105240_10000602 Ga0105240_1000060210 669
195 3300009148 Ga0105243_10000513 Ga0105243_100005133 669
196 3300009545 Ga0105237_10000372 Ga0105237_1000037248 669
197 3300009551 Ga0105238_10021064 Ga0105238_100210642 669
198 3300010375 Ga0105239_10000623 Ga0105239_1000062314 669
199 3300014745 Ga0157377_10000006 Ga0157377_1000000656 669
200 3300025273 Ga0209673_1013522 Ga0209673_10135222 669
201 3300025913 Ga0207695_10006330 Ga0207695_100063309 669
202 3300025914 Ga0207671_10002794 Ga0207671_100027947 669
203 3300025924 Ga0207694_10004873 Ga0207694_100048736 669
204 3300025935 Ga0207709_10000398 Ga0207709_100003982 669
205 3300026089 Ga0207648_10000873 Ga0207648_1000087322 669
206 3300026121 Ga0207683_10059473 Ga0207683_100594732 669
207 3300053086 Ga0500578_0000028 Ga0500578_0000028_138718_140760 669
208 iso_pu_bacteria 2585428057 2587728540 669
209 iso_pu_bacteria 2585428058 2587732500 669
210 iso_pu_bacteria 2588253510 2588291895 669
211 iso_pu_bacteria 2643221592 2643971451 669
212 iso_pu_bacteria 2643221625 2644140986 669
213 iso_pu_bacteria 2643221648 2644276778 669
214 3300006353 Ga0075370_10062840 Ga0075370_100628401 671
215 3300025949 Ga0207667_10018251 Ga0207667_100182512 671
216 3300048905 Ga0496102_0011557 Ga0496102_0011557_4798_6870 671
217 3300053148 Ga0500590_004620 Ga0500590_004620_420_2576 671
218 3300003791 Ga0055530_10003438 Ga0055530_100034382 673
219 3300003792 Ga0055540_1000184 Ga0055540_100018438 673
220 3300025298 Ga0209050_1001724 Ga0209050_100172419 673
221 3300025303 Ga0209051_1000004 Ga0209051_100000418 673
222 3300025304 Ga0209257_1000038 Ga0209257_1000038152 673
223 3300025304 Ga0209257_1000044 Ga0209257_1000044408 673
224 3300003215 JGI25153J46596_10002519 JGI25153J46596_100025192 677
225 3300025297 Ga0209758_1000969 Ga0209758_100096930 677

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08448

PAS_4

PAS fold

340

451

0.9

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

471

546

0.88

PF13426

PAS_9

PAS domain

343

448

0.81

PF00989

PAS

PAS fold

333

446

0.8

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

588

707

0.8

PF13188

PAS_8

PAS domain

332

397

0.8

Feature Viewer

pLDDT pTM Quality
79.96 0.42 Low
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Predicted Structure (AlphaFold2)

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