F337019

General Info

Members Datasets Scaffolds Average Seq Length
224 159 216 260

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0094514|Ga0466963_0094514_472_1395
Length 307
Sequence MHHPLVTEHPTNLRVVDNAGAVEGPMGRVDGKVALITGAARGQGRSHAIRLAEEGADIVAVDVCASFDTVPYPGASSEDLITTSKLVEDLDRRVIAREVDVRDSAGLASVVDEAVTELGHIDILVANAGIASFGPSWELTDEVWQEMIDVNLTGVWKSTSAVIPHMIARGQGGSIILTSSSAGLVGFGNLAHYCAAKHGVVGLMKALAIELAQHRIRVNSVHPTTVDTPMIDNPAVRQLFVPAVEGPSREQAQELLKAMNALPVPWVEAVDISNAVLFLASDEARFITGVQLPVEAGGTMPYKWPNV

Samples

Sample ID Description Type Environment
1 2547132424 Nocardia nova SH22a Isolate Unclassified
2 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
3 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
4 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
5 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
6 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
7 2922554459 Rhodococcus sp. 66b Isolate Unclassified
8 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
11 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
12 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
13 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
14 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
25 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
49 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
62 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
91 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
92 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
97 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
98 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
99 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
100 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
101 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
102 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
110 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
111 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
112 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
148 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
149 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
158 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.3
Metatranscriptomes 3.12
Isolates 3.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.93
Nodule 0
Rhizoplane 5.36
Rhizosphere 74.11
Stem 0
Stem Tuber 0
Unclassified 11.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1008505 3300000546 Bacteria 1102
2 JGI24740J21852_10014649 3300001979 Bacteria 2884
3 JGI24739J22299_10046774 3300001989 Bacteria 1415
4 rootH2_10010642 3300003320 Bacteria 5846
5 Ga0006562J51391_1005038 3300003578 Bacteria 4020
6 Ga0055533_1000002 3300003756 Bacteria 1196393
7 Ga0055525_1000022 3300003759 Bacteria 368755
8 Ga0055528_1040913 3300003790 Bacteria 1039
9 Ga0070658_10005877 3300005327 Bacteria 9950
10 Ga0070683_100060411 3300005329 Bacteria 3522
11 Ga0070680_100079201 3300005336 Bacteria 2708
12 Ga0070691_10025554 3300005341 Bacteria 2750
13 Ga0070667_100130667 3300005367 Bacteria 2191
14 Ga0070709_10014377 3300005434 Bacteria 4477
15 Ga0070709_10016888 3300005434 Bacteria 4176
16 Ga0070709_10222113 3300005434 Bacteria 1348
17 Ga0070714_100033961 3300005435 Bacteria 4270
18 Ga0070714_100127725 3300005435 Bacteria 2269
19 Ga0070714_100162519 3300005435 Bacteria 2021
20 Ga0070714_100434289 3300005435 Bacteria 1245
21 Ga0070713_100124352 3300005436 Bacteria 2267
22 Ga0070713_100335088 3300005436 Bacteria 1400
23 Ga0070713_100390175 3300005436 Bacteria 1299
24 Ga0070710_10055129 3300005437 Bacteria 2245
25 Ga0070710_10063006 3300005437 Bacteria 2117
26 Ga0070710_10182587 3300005437 Bacteria 1314
27 Ga0070711_100225050 3300005439 Bacteria 1460
28 Ga0070700_100115423 3300005441 Bacteria 1791
29 Ga0070708_100020894 3300005445 Bacteria 5528
30 Ga0070663_100015698 3300005455 Bacteria 4897
31 Ga0070663_100225057 3300005455 Bacteria 1474
32 Ga0070681_10232334 3300005458 Bacteria 1758
33 Ga0070681_10247675 3300005458 Bacteria 1695
34 Ga0070706_100473559 3300005467 Bacteria 1165
35 Ga0070706_100606821 3300005467 Bacteria 1017
36 Ga0070707_100273136 3300005468 Bacteria 1643
37 Ga0070698_100017136 3300005471 Bacteria 7637
38 Ga0070698_100126230 3300005471 Bacteria 2515
39 Ga0070679_100238524 3300005530 Bacteria 1776
40 Ga0070684_100043907 3300005535 Bacteria 3863
41 Ga0070665_100067538 3300005548 Bacteria 3585
42 Ga0070704_100092899 3300005549 Bacteria 2253
43 Ga0068857_100627938 3300005577 Bacteria 1017
44 Ga0068854_100587088 3300005578 Bacteria 949
45 Ga0068856_100362163 3300005614 Bacteria 1469
46 Ga0068856_100514958 3300005614 Bacteria 1217
47 Ga0068852_100619321 3300005616 Bacteria 1088
48 Ga0068863_100124441 3300005841 Bacteria 2460
49 Ga0068858_100259547 3300005842 Bacteria 1651
50 Ga0068862_100089305 3300005844 Bacteria 2682
51 Ga0081455_10007132 3300005937 Bacteria 11829
52 Ga0081455_10108556 3300005937 Bacteria 2210
53 Ga0081538_10000538 3300005981 Bacteria 41759
54 Ga0070717_10008247 3300006028 Bacteria 7778
55 Ga0070717_10321769 3300006028 Bacteria 1378
56 Ga0075365_10147292 3300006038 Bacteria 1637
57 Ga0075363_100046920 3300006048 Bacteria 2293
58 Ga0075363_100067151 3300006048 Bacteria 1942
59 Ga0070712_100024543 3300006175 Bacteria 3997
60 Ga0070712_100352501 3300006175 Bacteria 1205
61 Ga0070712_100659581 3300006175 Bacteria 889
62 Ga0075370_10005526 3300006353 Bacteria 6296
63 Ga0075370_10034928 3300006353 Bacteria 2820
64 Ga0075428_100696742 3300006844 Bacteria 1082
65 Ga0075430_100029277 3300006846 Bacteria 4674
66 Ga0105245_10217178 3300009098 Bacteria 1843
67 Ga0114129_10198493 3300009147 Bacteria 2719
68 Ga0157370_10030843 3300013104 Bacteria 5251
69 Ga0157369_10021075 3300013105 Bacteria 7285
70 Ga0157369_10167229 3300013105 Bacteria 2318
71 Ga0157369_10788165 3300013105 Bacteria 977
72 Ga0157379_10127049 3300014968 Bacteria 2294
73 Ga0206356_11065197 3300020070 Bacteria 2022
74 Ga0206354_10224315 3300020081 Bacteria 2729
75 Ga0206354_10340861 3300020081 Bacteria 1788
76 Ga0206353_11075542 3300020082 Bacteria 1471
77 Ga0213875_10007533 3300021388 Bacteria 5612
78 Ga0213875_10046218 3300021388 Bacteria 2043
79 Ga0213875_10046498 3300021388 Bacteria 2036
80 Ga0224712_10024908 3300022467 Bacteria 2097
81 Ga0224712_10060911 3300022467 Bacteria 1503
82 Ga0209566_100013 3300025225 Bacteria 474033
83 Ga0209674_100001 3300025226 Bacteria 4013750
84 Ga0209563_100001 3300025230 Bacteria 4013775
85 Ga0209677_100001 3300025253 Bacteria 4013787
86 Ga0207647_10130799 3300025904 Bacteria 1475
87 Ga0207647_10153786 3300025904 Bacteria 1344
88 Ga0207699_10023462 3300025906 Bacteria 3358
89 Ga0207699_10030355 3300025906 Bacteria 3023
90 Ga0207684_10000974 3300025910 Bacteria 32066
91 Ga0207684_10636098 3300025910 Bacteria 910
92 Ga0207707_10497570 3300025912 Bacteria 1040
93 Ga0207693_10047196 3300025915 Bacteria 3384
94 Ga0207693_10135782 3300025915 Bacteria 1934
95 Ga0207693_10279398 3300025915 Bacteria 1308
96 Ga0207663_10132899 3300025916 Bacteria 1722
97 Ga0207663_10190609 3300025916 Bacteria 1472
98 Ga0207660_10080022 3300025917 Bacteria 2398
99 Ga0207660_10427658 3300025917 Bacteria 1069
100 Ga0207657_10106795 3300025919 Bacteria 2316
101 Ga0207652_10020388 3300025921 Bacteria 5458
102 Ga0207687_10287321 3300025927 Bacteria 1320
103 Ga0207700_10025799 3300025928 Bacteria 4088
104 Ga0207700_10063073 3300025928 Bacteria 2817
105 Ga0207700_10421411 3300025928 Bacteria 1173
106 Ga0207664_10011346 3300025929 Bacteria 6326
107 Ga0207664_10014865 3300025929 Bacteria 5635
108 Ga0207664_10015084 3300025929 Bacteria 5597
109 Ga0207664_10053583 3300025929 Bacteria 3194
110 Ga0207664_10110157 3300025929 Bacteria 2289
111 Ga0207664_10111958 3300025929 Bacteria 2272
112 Ga0207664_10170658 3300025929 Bacteria 1861
113 Ga0207664_10251739 3300025929 Bacteria 1542
114 Ga0207686_10178376 3300025934 Bacteria 1504
115 Ga0207689_10008245 3300025942 Bacteria 9078
116 Ga0207661_10147888 3300025944 Bacteria 2028
117 Ga0207679_10464478 3300025945 Bacteria 1124
118 Ga0207668_10100617 3300025972 Bacteria 2147
119 Ga0207640_10574534 3300025981 Bacteria 951
120 Ga0207678_10018621 3300026067 Bacteria 6096
121 Ga0207678_10033949 3300026067 Bacteria 4444
122 Ga0207674_10202617 3300026116 Bacteria 1934
123 Ga0207674_10207651 3300026116 Bacteria 1908
124 Ga0209813_10143258 3300027866 Bacteria 850
125 Ga0268266_10093871 3300028379 Bacteria 2633
126 Ga0268265_10105243 3300028380 Bacteria 2289
127 Ga0265337_1004384 3300028556 Bacteria 5862
128 Ga0265326_10051208 3300028558 Bacteria 1169
129 Ga0265319_1056311 3300028563 Bacteria 1284
130 Ga0265334_10005092 3300028573 Bacteria 5761
131 Ga0265323_10010432 3300028653 Bacteria 3768
132 Ga0265338_10000936 3300028800 Bacteria 49246
133 Ga0265324_10008213 3300029957 Bacteria 4164
134 Ga0265332_10003756 3300031238 Bacteria 7260
135 Ga0265320_10012290 3300031240 Bacteria 4992
136 Ga0265325_10007232 3300031241 Bacteria 6675
137 Ga0265340_10035818 3300031247 Bacteria 2462
138 Ga0265339_10103586 3300031249 Bacteria 1478
139 Ga0265313_10007104 3300031595 Bacteria 7723
140 Ga0265314_10044794 3300031711 Bacteria 3132
141 Ga0265342_10010581 3300031712 Bacteria 6383
142 Ga0307413_10112768 3300031824 Bacteria 1824
143 Ga0307410_10136205 3300031852 Bacteria 1811
144 Ga0373931_0248713 3300035691 Bacteria 1080
145 Ga0395898_0382438 3300037466 Bacteria 1342
146 Ga0436364_0171406 3300037853 Bacteria 9678
147 Ga0436364_0348927 3300037853 Bacteria 8460
148 Ga0436364_0771547 3300037853 Bacteria 5705
149 Ga0436363_1609556 3300039450 Bacteria 1053
150 Ga0436362_0846256 3300039453 Bacteria 3780
151 Ga0439465_0021272 3300041413 Bacteria 2034
152 Ga0466972_0129583 3300044658 Bacteria 1188
153 Ga0466963_0010372 3300044694 Bacteria 5639
154 Ga0466963_0094514 3300044694 Bacteria 2039
155 Ga0466957_0024782 3300044842 Bacteria 3553
156 Ga0466960_0001467 3300044901 Bacteria 8597
157 Ga0466958_0022792 3300045836 Bacteria 3671
158 Ga0466967_0014424 3300045976 Bacteria 6155
159 Ga0466967_0064145 3300045976 Bacteria 3266
160 Ga0466967_0295924 3300045976 Bacteria 1556
161 Ga0495650_0029167 3300046471 Bacteria 2519
162 Ga0495667_0065740 3300046559 Bacteria 2372
163 Ga0495668_0000237 3300046616 Bacteria 78532
164 Ga0495669_0018076 3300046684 Bacteria 3028
165 Ga0495680_0424070 3300047322 Bacteria 915
166 Ga0495686_0098439 3300047472 Bacteria 1767
167 Ga0496102_0212790 3300048905 Bacteria 1822
168 Ga0496103_0247803 3300048906 Bacteria 1146
169 Ga0496104_0257592 3300048907 Bacteria 1658
170 Ga0496108_0070886 3300048911 Bacteria 2941
171 Ga0496108_0105227 3300048911 Bacteria 2409
172 Ga0496108_0194400 3300048911 Bacteria 1759
173 Ga0496108_0329269 3300048911 Bacteria 1332
174 Ga0496109_0258855 3300048912 Bacteria 1639
175 Ga0496112_0321664 3300048915 Bacteria 1491
176 Ga0496112_0656438 3300048915 Bacteria 978
177 Ga0496113_0501146 3300048916 Bacteria 975
178 Ga0496114_0407951 3300048917 Bacteria 1203
179 Ga0496117_0005684 3300048920 Bacteria 12990
180 Ga0496118_0000029 3300048921 Bacteria 340978
181 Ga0496118_0194082 3300048921 Bacteria 1211
182 Ga0496119_0000055 3300048922 Bacteria 180121
183 Ga0496119_0001193 3300048922 Bacteria 32523
184 Ga0496119_0014155 3300048922 Bacteria 6267
185 Ga0496121_0045926 3300048924 Bacteria 3746
186 Ga0496126_0000013 3300048929 Bacteria 690046
187 Ga0496126_0011682 3300048929 Bacteria 9058
188 Ga0496126_0046107 3300048929 Bacteria 4001
189 Ga0501031_0220871 3300049568 Bacteria 1234
190 Ga0501032_0016316 3300049569 Bacteria 5226
191 Ga0501032_0399740 3300049569 Bacteria 883
192 Ga0501034_0016027 3300049571 Bacteria 7691
193 Ga0501034_0085776 3300049571 Bacteria 3150
194 Ga0501034_0483089 3300049571 Bacteria 1154
195 Ga0501036_0257813 3300049572 Bacteria 1461
196 Ga0501042_0055871 3300049578 Bacteria 2817
197 Ga0501043_0126287 3300049579 Bacteria 2006
198 Ga0501046_0009514 3300049580 Bacteria 8399
199 Ga0501047_0062574 3300049581 Bacteria 3589
200 Ga0501048_0034084 3300049582 Bacteria 3676
201 Ga0501069_0105244 3300049585 Bacteria 1603
202 Ga0501070_0001474 3300049586 Bacteria 21091
203 Ga0501257_006512 3300049686 Bacteria 2591
204 Ga0501080_0041145 3300049742 Bacteria 4308
205 Ga0501035_0000337 3300049822 Bacteria 54675
206 Ga0501035_0007110 3300049822 Bacteria 10462
207 Ga0501044_0000498 3300049823 Bacteria 47714
208 Ga0501044_0012978 3300049823 Bacteria 9019
209 nmdc:mga03n38_4295_c1 3300050490 Bacteria 4698
210 nmdc:mga03n38_80216_c1 3300050490 Bacteria 1532
211 nmdc:mga06z11_93424_c1 3300050494 Bacteria 1637
212 nmdc:mga04h51_167123_c1 3300050495 Bacteria 849
213 nmdc:mga07m45_37888_c1 3300050496 Bacteria 2690
214 nmdc:mga0sz30_69730_c1 3300050516 Bacteria 1512
215 Ga0500568_0102968 3300053139 Bacteria 1070
216 Ga0466962_0045259 3300061719 Bacteria 2104

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300039450 Ga0436363_1609556 Ga0436363_1609556_46_801 196
2 3300006175 Ga0070712_100659581 Ga0070712_1006595811 198
3 3300021388 Ga0213875_10046218 Ga0213875_100462181 200
4 3300039453 Ga0436362_0846256 Ga0436362_0846256_2028_2783 200
5 3300025915 Ga0207693_10047196 Ga0207693_100471963 208
6 3300005535 Ga0070684_100043907 Ga0070684_1000439072 214
7 3300022467 Ga0224712_10060911 Ga0224712_100609112 214
8 3300046559 Ga0495667_0065740 Ga0495667_0065740_263_1015 214
9 3300047322 Ga0495680_0424070 Ga0495680_0424070_46_798 214
10 3300005548 Ga0070665_100067538 Ga0070665_1000675382 215
11 3300005614 Ga0068856_100514958 Ga0068856_1005149581 215
12 3300025904 Ga0207647_10153786 Ga0207647_101537861 215
13 3300025919 Ga0207657_10106795 Ga0207657_101067952 215
14 3300028379 Ga0268266_10093871 Ga0268266_100938712 215
15 3300037466 Ga0395898_0382438 Ga0395898_0382438_119_952 215
16 3300048907 Ga0496104_0257592 Ga0496104_0257592_786_1619 215
17 3300048911 Ga0496108_0070886 Ga0496108_0070886_1473_2306 215
18 3300048912 Ga0496109_0258855 Ga0496109_0258855_375_1208 215
19 3300048915 Ga0496112_0321664 Ga0496112_0321664_238_1071 215
20 3300049578 Ga0501042_0055871 Ga0501042_0055871_2035_2790 215
21 3300005367 Ga0070667_100130667 Ga0070667_1001306674 218
22 3300005842 Ga0068858_100259547 Ga0068858_1002595472 218
23 3300005437 Ga0070710_10182587 Ga0070710_101825872 221
24 3300005441 Ga0070700_100115423 Ga0070700_1001154231 221
25 3300005455 Ga0070663_100225057 Ga0070663_1002250572 221
26 3300005549 Ga0070704_100092899 Ga0070704_1000928992 221
27 3300020082 Ga0206353_11075542 Ga0206353_110755422 221
28 3300025942 Ga0207689_10008245 Ga0207689_100082456 221
29 3300026067 Ga0207678_10033949 Ga0207678_100339499 221
30 3300014968 Ga0157379_10127049 Ga0157379_101270492 224
31 3300005435 Ga0070714_100434289 Ga0070714_1004342891 225
32 3300005437 Ga0070710_10055129 Ga0070710_100551292 225
33 3300025929 Ga0207664_10053583 Ga0207664_100535832 225
34 3300048911 Ga0496108_0105227 Ga0496108_0105227_1264_2115 225
35 3300048929 Ga0496126_0046107 Ga0496126_0046107_2492_3340 225
36 3300049571 Ga0501034_0483089 Ga0501034_0483089_304_1137 226
37 3300005467 Ga0070706_100473559 Ga0070706_1004735591 227
38 3300005981 Ga0081538_10000538 Ga0081538_100005385 228
39 3300048920 Ga0496117_0005684 Ga0496117_0005684_9180_9866 228
40 3300044694 Ga0466963_0010372 Ga0466963_0010372_850_1539 229
41 3300044842 Ga0466957_0024782 Ga0466957_0024782_2333_3022 229
42 3300045836 Ga0466958_0022792 Ga0466958_0022792_141_830 229
43 3300045976 Ga0466967_0014424 Ga0466967_0014424_3752_4441 229
44 3300048917 Ga0496114_0407951 Ga0496114_0407951_297_986 229
45 3300048929 Ga0496126_0011682 Ga0496126_0011682_6299_6988 229
46 3300049568 Ga0501031_0220871 Ga0501031_0220871_99_788 229
47 3300049569 Ga0501032_0016316 Ga0501032_0016316_1416_2105 229
48 3300049571 Ga0501034_0016027 Ga0501034_0016027_3106_3795 229
49 3300049579 Ga0501043_0126287 Ga0501043_0126287_532_1221 229
50 3300049580 Ga0501046_0009514 Ga0501046_0009514_4605_5294 229
51 3300049582 Ga0501048_0034084 Ga0501048_0034084_2198_2887 229
52 3300049585 Ga0501069_0105244 Ga0501069_0105244_801_1490 229
53 3300049586 Ga0501070_0001474 Ga0501070_0001474_15926_16615 229
54 3300049742 Ga0501080_0041145 Ga0501080_0041145_3406_4095 229
55 3300049822 Ga0501035_0007110 Ga0501035_0007110_1064_1753 229
56 3300049823 Ga0501044_0012978 Ga0501044_0012978_683_1372 229
57 3300050494 nmdc:mga06z11_93424_c1 nmdc:mga06z11_93424_c1_161_850 229
58 3300050495 nmdc:mga04h51_167123_c1 nmdc:mga04h51_167123_c1_95_784 229
59 3300050516 nmdc:mga0sz30_69730_c1 nmdc:mga0sz30_69730_c1_152_841 229
60 3300061719 Ga0466962_0045259 Ga0466962_0045259_180_869 229
61 3300009147 Ga0114129_10198493 Ga0114129_101984933 230
62 3300045976 Ga0466967_0064145 Ga0466967_0064145_1861_2553 230
63 iso_pu_bacteria 2738541308 2738893160 232
64 3300006844 Ga0075428_100696742 Ga0075428_1006967422 233
65 3300006846 Ga0075430_100029277 Ga0075430_1000292774 233
66 3300005327 Ga0070658_10005877 Ga0070658_1000587710 234
67 3300009098 Ga0105245_10217178 Ga0105245_102171782 234
68 3300025927 Ga0207687_10287321 Ga0207687_102873212 234
69 3300046684 Ga0495669_0018076 Ga0495669_0018076_421_1224 234
70 iso_pu_bacteria 2547132424 2548695871 235
71 iso_pu_bacteria 2808606447 2809226366 235
72 iso_pu_bacteria 2816332139 2816511726 235
73 iso_pu_bacteria 2922554459 2922560821 236
74 3300005329 Ga0070683_100060411 Ga0070683_1000604112 239
75 3300005336 Ga0070680_100079201 Ga0070680_1000792012 239
76 3300005341 Ga0070691_10025554 Ga0070691_100255542 239
77 3300005434 Ga0070709_10016888 Ga0070709_100168883 239
78 3300005434 Ga0070709_10222113 Ga0070709_102221131 239
79 3300005435 Ga0070714_100162519 Ga0070714_1001625192 239
80 3300005436 Ga0070713_100124352 Ga0070713_1001243523 239
81 3300005436 Ga0070713_100335088 Ga0070713_1003350882 239
82 3300005437 Ga0070710_10063006 Ga0070710_100630061 239
83 3300005455 Ga0070663_100015698 Ga0070663_1000156985 239
84 3300005458 Ga0070681_10232334 Ga0070681_102323342 239
85 3300005458 Ga0070681_10247675 Ga0070681_102476752 239
86 3300005467 Ga0070706_100606821 Ga0070706_1006068211 239
87 3300005468 Ga0070707_100273136 Ga0070707_1002731362 239
88 3300005471 Ga0070698_100017136 Ga0070698_1000171361 239
89 3300005471 Ga0070698_100126230 Ga0070698_1001262301 239
90 3300005530 Ga0070679_100238524 Ga0070679_1002385241 239
91 3300005577 Ga0068857_100627938 Ga0068857_1006279381 239
92 3300005614 Ga0068856_100362163 Ga0068856_1003621632 239
93 3300005616 Ga0068852_100619321 Ga0068852_1006193211 239
94 3300005841 Ga0068863_100124441 Ga0068863_1001244412 239
95 3300005937 Ga0081455_10007132 Ga0081455_1000713216 239
96 3300006028 Ga0070717_10008247 Ga0070717_100082478 239
97 3300006048 Ga0075363_100046920 Ga0075363_1000469203 239
98 3300006175 Ga0070712_100024543 Ga0070712_1000245433 239
99 3300006175 Ga0070712_100352501 Ga0070712_1003525012 239
100 3300006353 Ga0075370_10005526 Ga0075370_100055263 239
101 3300013104 Ga0157370_10030843 Ga0157370_100308433 239
102 3300013105 Ga0157369_10021075 Ga0157369_100210753 239
103 3300013105 Ga0157369_10167229 Ga0157369_101672291 239
104 3300020070 Ga0206356_11065197 Ga0206356_110651972 239
105 3300020081 Ga0206354_10224315 Ga0206354_102243151 239
106 3300020081 Ga0206354_10340861 Ga0206354_103408612 239
107 3300022467 Ga0224712_10024908 Ga0224712_100249082 239
108 3300025904 Ga0207647_10130799 Ga0207647_101307991 239
109 3300025906 Ga0207699_10030355 Ga0207699_100303552 239
110 3300025910 Ga0207684_10000974 Ga0207684_1000097423 239
111 3300025910 Ga0207684_10636098 Ga0207684_106360981 239
112 3300025915 Ga0207693_10135782 Ga0207693_101357822 239
113 3300025915 Ga0207693_10279398 Ga0207693_102793982 239
114 3300025916 Ga0207663_10132899 Ga0207663_101328992 239
115 3300025917 Ga0207660_10080022 Ga0207660_100800222 239
116 3300025917 Ga0207660_10427658 Ga0207660_104276581 239
117 3300025921 Ga0207652_10020388 Ga0207652_100203882 239
118 3300025928 Ga0207700_10025799 Ga0207700_100257993 239
119 3300025928 Ga0207700_10063073 Ga0207700_100630733 239
120 3300025929 Ga0207664_10011346 Ga0207664_100113464 239
121 3300025929 Ga0207664_10015084 Ga0207664_100150843 239
122 3300025929 Ga0207664_10111958 Ga0207664_101119582 239
123 3300025929 Ga0207664_10251739 Ga0207664_102517392 239
124 3300025934 Ga0207686_10178376 Ga0207686_101783762 239
125 3300025944 Ga0207661_10147888 Ga0207661_101478882 239
126 3300025945 Ga0207679_10464478 Ga0207679_104644781 239
127 3300026067 Ga0207678_10018621 Ga0207678_100186214 239
128 3300026116 Ga0207674_10202617 Ga0207674_102026172 239
129 3300026116 Ga0207674_10207651 Ga0207674_102076511 239
130 3300028556 Ga0265337_1004384 Ga0265337_10043842 239
131 3300028558 Ga0265326_10051208 Ga0265326_100512081 239
132 3300028563 Ga0265319_1056311 Ga0265319_10563111 239
133 3300028573 Ga0265334_10005092 Ga0265334_100050922 239
134 3300028653 Ga0265323_10010432 Ga0265323_100104325 239
135 3300028800 Ga0265338_10000936 Ga0265338_1000093633 239
136 3300029957 Ga0265324_10008213 Ga0265324_100082131 239
137 3300031238 Ga0265332_10003756 Ga0265332_100037568 239
138 3300031240 Ga0265320_10012290 Ga0265320_100122902 239
139 3300031241 Ga0265325_10007232 Ga0265325_100072321 239
140 3300031247 Ga0265340_10035818 Ga0265340_100358182 239
141 3300031249 Ga0265339_10103586 Ga0265339_101035861 239
142 3300031595 Ga0265313_10007104 Ga0265313_100071041 239
143 3300031711 Ga0265314_10044794 Ga0265314_100447941 239
144 3300031712 Ga0265342_10010581 Ga0265342_100105812 239
145 3300035691 Ga0373931_0248713 Ga0373931_0248713_56_889 239
146 3300044658 Ga0466972_0129583 Ga0466972_0129583_301_1143 239
147 3300044901 Ga0466960_0001467 Ga0466960_0001467_4627_5469 239
148 3300046616 Ga0495668_0000237 Ga0495668_0000237_29270_30100 239
149 3300047472 Ga0495686_0098439 Ga0495686_0098439_862_1704 239
150 3300048911 Ga0496108_0194400 Ga0496108_0194400_405_1235 239
151 3300048911 Ga0496108_0329269 Ga0496108_0329269_277_1110 239
152 3300048915 Ga0496112_0656438 Ga0496112_0656438_103_933 239
153 3300048916 Ga0496113_0501146 Ga0496113_0501146_33_827 239
154 3300048921 Ga0496118_0194082 Ga0496118_0194082_360_1190 239
155 3300048922 Ga0496119_0000055 Ga0496119_0000055_123069_123899 239
156 3300048922 Ga0496119_0001193 Ga0496119_0001193_272_1102 239
157 3300048922 Ga0496119_0014155 Ga0496119_0014155_1737_2567 239
158 3300048924 Ga0496121_0045926 Ga0496121_0045926_1943_2824 239
159 3300048929 Ga0496126_0000013 Ga0496126_0000013_343544_344377 239
160 3300049569 Ga0501032_0399740 Ga0501032_0399740_28_774 239
161 3300050490 nmdc:mga03n38_4295_c1 nmdc:mga03n38_4295_c1_3287_4117 239
162 3300050496 nmdc:mga07m45_37888_c1 nmdc:mga07m45_37888_c1_1810_2640 239
163 iso_pu_bacteria 2922554459 2922556022 239
164 3300005445 Ga0070708_100020894 Ga0070708_1000208945 240
165 3300005844 Ga0068862_100089305 Ga0068862_1000893053 240
166 3300006028 Ga0070717_10321769 Ga0070717_103217692 240
167 3300021388 Ga0213875_10007533 Ga0213875_100075333 240
168 3300021388 Ga0213875_10046498 Ga0213875_100464983 240
169 3300025972 Ga0207668_10100617 Ga0207668_101006172 240
170 3300028380 Ga0268265_10105243 Ga0268265_101052432 240
171 3300037853 Ga0436364_0171406 Ga0436364_0171406_6528_7382 240
172 3300037853 Ga0436364_0771547 Ga0436364_0771547_1424_2278 240
173 3300045976 Ga0466967_0295924 Ga0466967_0295924_187_948 240
174 3300049686 Ga0501257_006512 Ga0501257_006512_275_1057 240
175 3300006048 Ga0075363_100067151 Ga0075363_1000671512 241
176 3300050490 nmdc:mga03n38_80216_c1 nmdc:mga03n38_80216_c1_251_1117 241
177 iso_pu_bacteria 2844841374 2844844589 241
178 iso_pu_bacteria 2870782633 2870788627 241
179 3300053139 Ga0500568_0102968 Ga0500568_0102968_161_1000 242
180 3300025912 Ga0207707_10497570 Ga0207707_104975701 243
181 3300041413 Ga0439465_0021272 Ga0439465_0021272_798_1532 244
182 3300001979 JGI24740J21852_10014649 JGI24740J21852_100146491 245
183 3300001989 JGI24739J22299_10046774 JGI24739J22299_100467742 245
184 3300003578 Ga0006562J51391_1005038 Ga0006562J51391_10050381 245
185 3300003756 Ga0055533_1000002 Ga0055533_1000002335 245
186 3300003759 Ga0055525_1000022 Ga0055525_1000022130 245
187 3300025225 Ga0209566_100013 Ga0209566_100013453 245
188 3300025226 Ga0209674_100001 Ga0209674_1000013228 245
189 3300025230 Ga0209563_100001 Ga0209563_1000013228 245
190 3300025253 Ga0209677_100001 Ga0209677_1000013228 245
191 3300031824 Ga0307413_10112768 Ga0307413_101127681 245
192 3300031852 Ga0307410_10136205 Ga0307410_101362053 245
193 3300044694 Ga0466963_0094514 Ga0466963_0094514_472_1395 245
194 3300046471 Ga0495650_0029167 Ga0495650_0029167_1099_1980 245
195 3300049571 Ga0501034_0085776 Ga0501034_0085776_1333_2070 245
196 3300049572 Ga0501036_0257813 Ga0501036_0257813_354_1091 245
197 3300049581 Ga0501047_0062574 Ga0501047_0062574_40_777 245
198 3300049822 Ga0501035_0000337 Ga0501035_0000337_1204_1941 245
199 3300049823 Ga0501044_0000498 Ga0501044_0000498_4918_5655 245
200 3300005937 Ga0081455_10108556 Ga0081455_101085562 246
201 3300006038 Ga0075365_10147292 Ga0075365_101472922 246
202 3300006353 Ga0075370_10034928 Ga0075370_100349283 246
203 3300025929 Ga0207664_10170658 Ga0207664_101706581 246
204 3300027866 Ga0209813_10143258 Ga0209813_101432581 246
205 3300037853 Ga0436364_0348927 Ga0436364_0348927_7401_8141 246
206 3300048905 Ga0496102_0212790 Ga0496102_0212790_712_1452 246
207 3300048906 Ga0496103_0247803 Ga0496103_0247803_295_1035 246
208 3300048921 Ga0496118_0000029 Ga0496118_0000029_26185_26925 246
209 3300000546 LJNas_1008505 LJNas_10085051 247
210 3300003320 rootH2_10010642 rootH2_100106427 247
211 3300003790 Ga0055528_1040913 Ga0055528_10409131 247
212 3300005434 Ga0070709_10014377 Ga0070709_100143774 247
213 3300005435 Ga0070714_100033961 Ga0070714_1000339616 247
214 3300005435 Ga0070714_100127725 Ga0070714_1001277251 247
215 3300005436 Ga0070713_100390175 Ga0070713_1003901752 247
216 3300005439 Ga0070711_100225050 Ga0070711_1002250502 247
217 3300005578 Ga0068854_100587088 Ga0068854_1005870882 247
218 3300013105 Ga0157369_10788165 Ga0157369_107881651 247
219 3300025906 Ga0207699_10023462 Ga0207699_100234623 247
220 3300025916 Ga0207663_10190609 Ga0207663_101906092 247
221 3300025928 Ga0207700_10421411 Ga0207700_104214112 247
222 3300025929 Ga0207664_10014865 Ga0207664_100148655 247
223 3300025929 Ga0207664_10110157 Ga0207664_101101574 247
224 3300025981 Ga0207640_10574534 Ga0207640_105745342 247

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

32

237

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

38

299

0.84

PF08659

KR

KR domain

32

228

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nff-assembly1.cif.gz_A crystal structure of rv2002 gene product from mycobacterium tuberculosis 0.9829 1 244
1nff-assembly1.cif.gz_A crystal structure of rv2002 gene product from mycobacterium tuberculosis 0.9789 1 244
4nbv-assembly1.cif.gz_A crystal structure of fabg from cupriavidus taiwanensis 0.9715 3 236
3gvc-assembly1.cif.gz_A-2 crystal structure of probable short-chain dehydrogenase-reductase from mycobacterium tuberculosis 0.9707 5 241
4dqx-assembly1.cif.gz_B crystal structure of a short chain dehydrogenase from rhizobium etli cfn 42 0.9701 3 240
ID Description Score Start End Superfamily
af_A0A0P0X9U1_21_128_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9925 3 90 3.40.50.720
1nfrD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9814 1 244 3.40.50.720
af_P9WGR9_1_247_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.978 2 236 3.40.50.720
1nfrD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9773 1 244 3.40.50.720
4urfA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9734 3 240 3.40.50.720
ID Description Score Start End GO Terms
AF-X8FGA4-F1-model_v4 deleted 0.9956 1 242
AF-A0A7I7RUG8-F1-model_v4 3-alpha-hydroxysteroid dehydrogenase 0.9945 1 247 GO:0016491
AF-A0A100VWI7-F1-model_v4 20-beta-hydroxysteroid dehydrogenase 0.9937 19 245 GO:0016616
AF-A0A498QXK2-F1-model_v4 3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase (EC 1.1.1.53) 0.9914 1 245 GO:0047044
AF-A0A1C4FEF1-F1-model_v4 deleted 0.9908 1 244

Feature Viewer

pLDDT pTM Quality
94.53 0.93 High
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Predicted Structure (AlphaFold2)

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