F336793

General Info

Members Datasets Scaffolds Average Seq Length
224 161 448 279

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10041923|Ga0207684_100419233
Length 315
Sequence MISEGKGSTSVASLRATRGPWPERIPVGYLCSVRSMTGFGRGVAEQGRTRATVDVRTVNHRFLDLKLRGQLAPALEDAISTRVRAAIERGSVSVSVHVVREGGAGAMRIDEGAARAAHRQLADLARVLGTAGPELALVLAQPGVVIAAEDDPRDDSDAPAVLAALDAALVQLATMRDGEGLALARELLARLDELGRLRVDIERLAADIPEREATERSNDAGGFLDPVRLAQEVALLADRADVTEELVRLASHLDQARALINGSGAAGRRLDFLVQEIGRELNTIGSKSAATEISSAIVEAKAVLEKVREQVQNVE

Samples

Sample ID Description Type Environment
1 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
94 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
95 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
96 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
97 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
98 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
99 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
100 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
112 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
115 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
116 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
117 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
118 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
119 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
138 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
145 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
146 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
147 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
148 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.55
Metatranscriptomes 0.45
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.45
Nodule 0
Rhizoplane 2.23
Rhizosphere 93.3
Stem 0
Stem Tuber 0
Unclassified 7.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207684_10041923 3300025910 Unclassified 3880
2 Ga0070676_10005664 3300005328 Bacteria 6651
3 Ga0070683_100244423 3300005329 Unclassified 1707
4 Ga0070690_100143299 3300005330 Bacteria 1623
5 Ga0070670_100005728 3300005331 Bacteria 10492
6 Ga0070680_100127441 3300005336 Bacteria 2127
7 Ga0070680_100146981 3300005336 Unclassified 1978
8 Ga0070689_100020953 3300005340 Bacteria 4860
9 Ga0070689_100069972 3300005340 Bacteria 2738
10 Ga0070689_100363696 3300005340 Bacteria 1216
11 Ga0070691_10025041 3300005341 Bacteria 2777
12 Ga0070687_100086200 3300005343 Bacteria 1726
13 Ga0070692_10045406 3300005345 Bacteria 2266
14 Ga0070692_10132478 3300005345 Bacteria 1402
15 Ga0070668_100396157 3300005347 Bacteria 1178
16 Ga0070675_100201462 3300005354 Bacteria 1728
17 Ga0070675_100488035 3300005354 Bacteria 1109
18 Ga0070688_100109974 3300005365 Bacteria 1831
19 Ga0070688_100138244 3300005365 Bacteria 1652
20 Ga0070667_100180435 3300005367 Bacteria 1867
21 Ga0070701_10014192 3300005438 Bacteria 3646
22 Ga0070694_100153106 3300005444 Bacteria 1686
23 Ga0070663_100040935 3300005455 Unclassified 3247
24 Ga0070678_100033416 3300005456 Bacteria 3571
25 Ga0070678_100421650 3300005456 Bacteria 1163
26 Ga0068867_100019658 3300005459 Bacteria 4811
27 Ga0070698_100002222 3300005471 Bacteria 21479
28 Ga0070698_100140265 3300005471 Unclassified 2369
29 Ga0070699_100303696 3300005518 Bacteria 1432
30 Ga0070679_100001584 3300005530 Bacteria 20400
31 Ga0070679_100004463 3300005530 Bacteria 12927
32 Ga0070679_100151628 3300005530 Unclassified 2294
33 Ga0070672_100005878 3300005543 Bacteria 8182
34 Ga0070672_100052632 3300005543 Bacteria 3179
35 Ga0070686_100030902 3300005544 Bacteria 3271
36 Ga0070665_100086579 3300005548 Bacteria 3138
37 Ga0068855_100566555 3300005563 Bacteria 1228
38 Ga0068856_100212995 3300005614 Bacteria 1947
39 Ga0070702_100385634 3300005615 Bacteria 998
40 Ga0068852_100379702 3300005616 Bacteria 1386
41 Ga0068859_100233217 3300005617 Bacteria 1929
42 Ga0068859_100406578 3300005617 Bacteria 1457
43 Ga0068864_100378305 3300005618 Bacteria 1341
44 Ga0068864_100544554 3300005618 Bacteria 1121
45 Ga0068866_10012424 3300005718 Bacteria 3709
46 Ga0068861_100048262 3300005719 Bacteria 3218
47 Ga0068861_100074057 3300005719 Bacteria 2647
48 Ga0068863_100011927 3300005841 Bacteria 8400
49 Ga0068858_100400602 3300005842 Bacteria 1318
50 Ga0068860_100075401 3300005843 Bacteria 3208
51 Ga0070717_10016471 3300006028 Bacteria 5731
52 Ga0075428_100048758 3300006844 Bacteria 4648
53 Ga0075433_10028179 3300006852 Bacteria 4774
54 Ga0068865_100008263 3300006881 Bacteria 6427
55 Ga0075436_100072546 3300006914 Bacteria 2382
56 Ga0097620_100233240 3300006931 Bacteria 1929
57 Ga0097620_100406581 3300006931 Bacteria 1457
58 Ga0075435_100066705 3300007076 Bacteria 2929
59 Ga0105240_10024796 3300009093 Bacteria 7897
60 Ga0111539_10001662 3300009094 Bacteria 29721
61 Ga0111539_10005046 3300009094 Bacteria 17157
62 Ga0105245_10000082 3300009098 Bacteria 95636
63 Ga0105243_10015195 3300009148 Bacteria 5827
64 Ga0105249_10066358 3300009553 Bacteria 3322
65 Ga0157369_10131502 3300013105 Unclassified 2652
66 Ga0157369_10168940 3300013105 Unclassified 2305
67 Ga0157374_10018606 3300013296 Bacteria 6135
68 Ga0163162_10289247 3300013306 Bacteria 1771
69 Ga0163162_10543325 3300013306 Bacteria 1291
70 Ga0157372_10342779 3300013307 Unclassified 1741
71 Ga0157376_10037390 3300014969 Bacteria 3940
72 Ga0206353_11296527 3300020082 Bacteria 1020
73 Ga0213876_10031177 3300021384 Bacteria 2814
74 Ga0207642_10054273 3300025899 Bacteria 1827
75 Ga0207645_10002706 3300025907 Bacteria 13808
76 Ga0207643_10239760 3300025908 Bacteria 1114
77 Ga0207707_10000322 3300025912 Bacteria 50600
78 Ga0207707_10151445 3300025912 Unclassified 2027
79 Ga0207695_10039025 3300025913 Bacteria 5107
80 Ga0207662_10038966 3300025918 Bacteria 2786
81 Ga0207649_10033149 3300025920 Unclassified 3084
82 Ga0207652_10024762 3300025921 Unclassified 4981
83 Ga0207652_10100154 3300025921 Unclassified 2558
84 Ga0207652_10123257 3300025921 Unclassified 2307
85 Ga0207681_10005410 3300025923 Bacteria 7843
86 Ga0207659_10076614 3300025926 Bacteria 2459
87 Ga0207659_10176965 3300025926 Bacteria 1687
88 Ga0207687_10000088 3300025927 Bacteria 67356
89 Ga0207687_10110780 3300025927 Bacteria 2036
90 Ga0207686_10422737 3300025934 Bacteria 1020
91 Ga0207709_10012242 3300025935 Bacteria 4727
92 Ga0207670_10010781 3300025936 Bacteria 5274
93 Ga0207704_10180597 3300025938 Bacteria 1524
94 Ga0207691_10115967 3300025940 Bacteria 2377
95 Ga0207689_10043249 3300025942 Bacteria 3724
96 Ga0207661_10090368 3300025944 Bacteria 2550
97 Ga0207651_10015675 3300025960 Bacteria 4413
98 Ga0207712_10372519 3300025961 Bacteria 1193
99 Ga0207668_10188768 3300025972 Bacteria 1631
100 Ga0207668_10560744 3300025972 Bacteria 991
101 Ga0207658_10249944 3300025986 Bacteria 1506
102 Ga0207677_10102933 3300026023 Bacteria 2107
103 Ga0207708_10000762 3300026075 Bacteria 24184
104 Ga0207702_10102573 3300026078 Bacteria 2529
105 Ga0207641_10055278 3300026088 Bacteria 3370
106 Ga0207648_10011544 3300026089 Bacteria 8318
107 Ga0207676_10117221 3300026095 Bacteria 2239
108 Ga0207676_10328644 3300026095 Bacteria 1406
109 Ga0207674_10402133 3300026116 Bacteria 1323
110 Ga0207675_100011106 3300026118 Bacteria 8438
111 Ga0207675_100015677 3300026118 Bacteria 7068
112 Ga0207675_100042547 3300026118 Bacteria 4242
113 Ga0207683_10133863 3300026121 Bacteria 2230
114 Ga0207683_10436001 3300026121 Bacteria 1207
115 Ga0207698_10516750 3300026142 Bacteria 1165
116 Ga0207428_10014143 3300027907 Bacteria 6948
117 Ga0268266_10002341 3300028379 Bacteria 20498
118 Ga0268266_10424675 3300028379 Bacteria 1260
119 Ga0268264_10085611 3300028381 Bacteria 2706
120 Ga0265319_1065532 3300028563 Bacteria 1171
121 Ga0265338_10092163 3300028800 Bacteria 2500
122 Ga0265327_10022441 3300031251 Bacteria 3774
123 Ga0307513_10007188 3300031456 Bacteria 14459
124 Ga0307509_10000029 3300031507 Bacteria 215555
125 Ga0307509_10011941 3300031507 Bacteria 10436
126 Ga0307509_10014133 3300031507 Bacteria 9410
127 Ga0307516_10020966 3300031730 Bacteria 6743
128 Ga0307516_10056583 3300031730 Bacteria 3824
129 Ga0373950_0000016 3300034818 Bacteria 277879
130 Ga0373950_0000024 3300034818 Bacteria 186458
131 Ga0373936_0000001 3300035113 Bacteria 456155
132 Ga0373946_0055605 3300035171 Bacteria 1669
133 Ga0395899_0029470 3300037312 Bacteria 4128
134 Ga0395900_0092920 3300037418 Bacteria 3099
135 Ga0395905_0520539 3300037471 Bacteria 1090
136 Ga0436364_1500939 3300037853 Bacteria 1213
137 Ga0395901_0094474 3300038443 Bacteria 3132
138 Ga0395901_0549650 3300038443 Unclassified 1170
139 Ga0436365_1126481 3300039437 Bacteria 2972
140 Ga0453683_0032408 3300044673 Bacteria 3298
141 Ga0451576_0019924 3300045051 Bacteria 7312
142 Ga0495603_0152010 3300046455 Bacteria 1344
143 Ga0495629_0225462 3300046459 Bacteria 1292
144 Ga0495651_0099886 3300046462 Bacteria 2163
145 Ga0495664_0015232 3300046477 Bacteria 4368
146 Ga0495594_0035219 3300046499 Bacteria 2726
147 Ga0495628_0106878 3300046516 Bacteria 2155
148 Ga0495665_0108298 3300046531 Bacteria 1458
149 Ga0495586_0005386 3300046535 Bacteria 6841
150 Ga0495645_0079636 3300046543 Bacteria 2353
151 Ga0495634_0003838 3300046642 Bacteria 11940
152 Ga0495635_0080649 3300046663 Bacteria 2227
153 Ga0495646_0184349 3300046680 Unclassified 1144
154 Ga0495613_0038851 3300046689 Bacteria 3529
155 Ga0495674_0010781 3300047319 Bacteria 8647
156 Ga0495674_0090775 3300047319 Bacteria 2610
157 Ga0495680_0028722 3300047322 Bacteria 4559
158 Ga0495675_0014840 3300047444 Bacteria 4927
159 Ga0496108_0054178 3300048911 Bacteria 3366
160 Ga0496110_0498444 3300048913 Unclassified 1109
161 Ga0496114_0011662 3300048917 Bacteria 7031
162 Ga0496114_0024679 3300048917 Bacteria 4908
163 Ga0496115_0053602 3300048918 Bacteria 3237
164 Ga0501034_0000096 3300049571 Bacteria 161155
165 Ga0501034_0224086 3300049571 Bacteria 1832
166 Ga0501034_0339143 3300049571 Bacteria 1433
167 Ga0501036_0057815 3300049572 Bacteria 3285
168 Ga0501037_0263043 3300049573 Bacteria 1205
169 Ga0501043_0002266 3300049579 Bacteria 16356
170 Ga0501046_0000712 3300049580 Bacteria 32095
171 Ga0501047_0000008 3300049581 Bacteria 441758
172 Ga0501047_0062958 3300049581 Bacteria 3578
173 Ga0501047_0365385 3300049581 Bacteria 1278
174 Ga0501048_0004819 3300049582 Bacteria 10284
175 Ga0501067_0000064 3300049583 Bacteria 60217
176 Ga0501067_0137103 3300049583 Bacteria 1362
177 Ga0501068_0014842 3300049584 Bacteria 4461
178 Ga0501068_0126455 3300049584 Bacteria 1596
179 Ga0501069_0018088 3300049585 Bacteria 3802
180 Ga0501070_0000064 3300049586 Bacteria 89114
181 Ga0501070_0001233 3300049586 Bacteria 22912
182 Ga0501070_0093852 3300049586 Bacteria 2482
183 Ga0501070_0119899 3300049586 Bacteria 2174
184 Ga0501070_0185442 3300049586 Bacteria 1711
185 Ga0501071_0363401 3300049587 Bacteria 1102
186 Ga0501072_0000137 3300049588 Bacteria 55037
187 Ga0501073_0000429 3300049589 Bacteria 28785
188 Ga0501073_0000915 3300049589 Bacteria 21225
189 Ga0501073_0003425 3300049589 Bacteria 11925
190 Ga0501073_0008719 3300049589 Bacteria 7507
191 Ga0501073_0013045 3300049589 Bacteria 6061
192 Ga0501073_0081297 3300049589 Bacteria 2254
193 Ga0501074_0005238 3300049590 Bacteria 9326
194 Ga0501074_0076933 3300049590 Bacteria 2395
195 Ga0501077_0372333 3300049593 Bacteria 912
196 Ga0501216_006129 3300049660 Bacteria 1834
197 Ga0501217_005561 3300049661 Bacteria 2642
198 Ga0501227_035664 3300049665 Bacteria 1211
199 Ga0501233_002335 3300049668 Bacteria 3340
200 Ga0501225_0002075 3300049705 Bacteria 6229
201 Ga0501079_0000109 3300049741 Bacteria 42429
202 Ga0501079_0039193 3300049741 Bacteria 3654
203 Ga0501080_0009000 3300049742 Bacteria 9085
204 Ga0501080_0012400 3300049742 Bacteria 7815
205 Ga0501080_0019921 3300049742 Bacteria 6211
206 Ga0501080_0155537 3300049742 Bacteria 2112
207 Ga0501081_0078544 3300049743 Bacteria 2307
208 Ga0501083_0006517 3300049744 Bacteria 8276
209 Ga0501083_0020752 3300049744 Bacteria 4567
210 Ga0501083_0024582 3300049744 Bacteria 4172
211 Ga0501044_0592411 3300049823 Bacteria 1002
212 Ga0501045_0114284 3300049824 Bacteria 2002
213 nmdc:mga09592_8590_c1 3300050508 Bacteria 8309
214 nmdc:mga08y16_112826_c1 3300050511 Bacteria 2830
215 nmdc:mga08y16_791_c1 3300050511 Bacteria 30218
216 nmdc:mga08x19_222773_c1 3300050514 Bacteria 1296
217 nmdc:mga0a205_4075_c3 3300050515 Bacteria 4637
218 Ga0500568_0011893 3300053139 Bacteria 4018
219 Ga0501084_0000089 3300054114 Bacteria 66547
220 Ga0501084_0150920 3300054114 Bacteria 1959
221 Ga0501082_0000521 3300060353 Bacteria 34241
222 Ga0501082_0001020 3300060353 Bacteria 24759
223 Ga0501082_0034465 3300060353 Bacteria 4364
224 Ga0501082_0111672 3300060353 Bacteria 2366
225 Ga0207684_10041923
226 Ga0070676_10005664
227 Ga0070683_100244423
228 Ga0070690_100143299
229 Ga0070670_100005728
230 Ga0070680_100127441
231 Ga0070680_100146981
232 Ga0070689_100020953
233 Ga0070689_100069972
234 Ga0070689_100363696
235 Ga0070691_10025041
236 Ga0070687_100086200
237 Ga0070692_10045406
238 Ga0070692_10132478
239 Ga0070668_100396157
240 Ga0070675_100201462
241 Ga0070675_100488035
242 Ga0070688_100109974
243 Ga0070688_100138244
244 Ga0070667_100180435
245 Ga0070701_10014192
246 Ga0070694_100153106
247 Ga0070663_100040935
248 Ga0070678_100033416
249 Ga0070678_100421650
250 Ga0068867_100019658
251 Ga0070698_100002222
252 Ga0070698_100140265
253 Ga0070699_100303696
254 Ga0070679_100001584
255 Ga0070679_100004463
256 Ga0070679_100151628
257 Ga0070672_100005878
258 Ga0070672_100052632
259 Ga0070686_100030902
260 Ga0070665_100086579
261 Ga0068855_100566555
262 Ga0068856_100212995
263 Ga0070702_100385634
264 Ga0068852_100379702
265 Ga0068859_100233217
266 Ga0068859_100406578
267 Ga0068864_100378305
268 Ga0068864_100544554
269 Ga0068866_10012424
270 Ga0068861_100048262
271 Ga0068861_100074057
272 Ga0068863_100011927
273 Ga0068858_100400602
274 Ga0068860_100075401
275 Ga0070717_10016471
276 Ga0075428_100048758
277 Ga0075433_10028179
278 Ga0068865_100008263
279 Ga0075436_100072546
280 Ga0097620_100233240
281 Ga0097620_100406581
282 Ga0075435_100066705
283 Ga0105240_10024796
284 Ga0111539_10001662
285 Ga0111539_10005046
286 Ga0105245_10000082
287 Ga0105243_10015195
288 Ga0105249_10066358
289 Ga0157369_10131502
290 Ga0157369_10168940
291 Ga0157374_10018606
292 Ga0163162_10289247
293 Ga0163162_10543325
294 Ga0157372_10342779
295 Ga0157376_10037390
296 Ga0206353_11296527
297 Ga0213876_10031177
298 Ga0207642_10054273
299 Ga0207645_10002706
300 Ga0207643_10239760
301 Ga0207707_10000322
302 Ga0207707_10151445
303 Ga0207695_10039025
304 Ga0207662_10038966
305 Ga0207649_10033149
306 Ga0207652_10024762
307 Ga0207652_10100154
308 Ga0207652_10123257
309 Ga0207681_10005410
310 Ga0207659_10076614
311 Ga0207659_10176965
312 Ga0207687_10000088
313 Ga0207687_10110780
314 Ga0207686_10422737
315 Ga0207709_10012242
316 Ga0207670_10010781
317 Ga0207704_10180597
318 Ga0207691_10115967
319 Ga0207689_10043249
320 Ga0207661_10090368
321 Ga0207651_10015675
322 Ga0207712_10372519
323 Ga0207668_10188768
324 Ga0207668_10560744
325 Ga0207658_10249944
326 Ga0207677_10102933
327 Ga0207708_10000762
328 Ga0207702_10102573
329 Ga0207641_10055278
330 Ga0207648_10011544
331 Ga0207676_10117221
332 Ga0207676_10328644
333 Ga0207674_10402133
334 Ga0207675_100011106
335 Ga0207675_100015677
336 Ga0207675_100042547
337 Ga0207683_10133863
338 Ga0207683_10436001
339 Ga0207698_10516750
340 Ga0207428_10014143
341 Ga0268266_10002341
342 Ga0268266_10424675
343 Ga0268264_10085611
344 Ga0265319_1065532
345 Ga0265338_10092163
346 Ga0265327_10022441
347 Ga0307513_10007188
348 Ga0307509_10000029
349 Ga0307509_10011941
350 Ga0307509_10014133
351 Ga0307516_10020966
352 Ga0307516_10056583
353 Ga0373950_0000016
354 Ga0373950_0000024
355 Ga0373936_0000001
356 Ga0373946_0055605
357 Ga0395899_0029470
358 Ga0395900_0092920
359 Ga0395905_0520539
360 Ga0436364_1500939
361 Ga0395901_0094474
362 Ga0395901_0549650
363 Ga0436365_1126481
364 Ga0453683_0032408
365 Ga0451576_0019924
366 Ga0495603_0152010
367 Ga0495629_0225462
368 Ga0495651_0099886
369 Ga0495664_0015232
370 Ga0495594_0035219
371 Ga0495628_0106878
372 Ga0495665_0108298
373 Ga0495586_0005386
374 Ga0495645_0079636
375 Ga0495634_0003838
376 Ga0495635_0080649
377 Ga0495646_0184349
378 Ga0495613_0038851
379 Ga0495674_0010781
380 Ga0495674_0090775
381 Ga0495680_0028722
382 Ga0495675_0014840
383 Ga0496108_0054178
384 Ga0496110_0498444
385 Ga0496114_0011662
386 Ga0496114_0024679
387 Ga0496115_0053602
388 Ga0501034_0000096
389 Ga0501034_0224086
390 Ga0501034_0339143
391 Ga0501036_0057815
392 Ga0501037_0263043
393 Ga0501043_0002266
394 Ga0501046_0000712
395 Ga0501047_0000008
396 Ga0501047_0062958
397 Ga0501047_0365385
398 Ga0501048_0004819
399 Ga0501067_0000064
400 Ga0501067_0137103
401 Ga0501068_0014842
402 Ga0501068_0126455
403 Ga0501069_0018088
404 Ga0501070_0000064
405 Ga0501070_0001233
406 Ga0501070_0093852
407 Ga0501070_0119899
408 Ga0501070_0185442
409 Ga0501071_0363401
410 Ga0501072_0000137
411 Ga0501073_0000429
412 Ga0501073_0000915
413 Ga0501073_0003425
414 Ga0501073_0008719
415 Ga0501073_0013045
416 Ga0501073_0081297
417 Ga0501074_0005238
418 Ga0501074_0076933
419 Ga0501077_0372333
420 Ga0501216_006129
421 Ga0501217_005561
422 Ga0501227_035664
423 Ga0501233_002335
424 Ga0501225_0002075
425 Ga0501079_0000109
426 Ga0501079_0039193
427 Ga0501080_0009000
428 Ga0501080_0012400
429 Ga0501080_0019921
430 Ga0501080_0155537
431 Ga0501081_0078544
432 Ga0501083_0006517
433 Ga0501083_0020752
434 Ga0501083_0024582
435 Ga0501044_0592411
436 Ga0501045_0114284
437 nmdc:mga09592_8590_c1
438 nmdc:mga08y16_112826_c1
439 nmdc:mga08y16_791_c1
440 nmdc:mga08x19_222773_c1
441 nmdc:mga0a205_4075_c3
442 Ga0500568_0011893
443 Ga0501084_0000089
444 Ga0501084_0150920
445 Ga0501082_0000521
446 Ga0501082_0001020
447 Ga0501082_0034465
448 Ga0501082_0111672

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08340

YicC-like_C

Endoribonuclease YicC-like, C-terminal

196

315

0.92

PF03755

YicC-like_N

Endoribonuclease YicC-like, N-terminal region

33

185

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2w2u-assembly1.cif.gz_A structural insight into the interaction between archaeal escrt-iii and aaa-atpase 0.8162 210 283
2w2u-assembly1.cif.gz_A structural insight into the interaction between archaeal escrt-iii and aaa-atpase 0.7793 210 283
8hvj-assembly1.cif.gz_C-2 the structure of the e. coli mrna endoonuclease yicc 0.7649 18 282
8hvj-assembly1.cif.gz_A-2 the structure of the e. coli mrna endoonuclease yicc 0.7615 4 283
8hvj-assembly1.cif.gz_C-2 the structure of the e. coli mrna endoonuclease yicc 0.7593 18 282
ID Description Score Start End Superfamily
af_P23839_203_287_1.20.58.220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphate transport system protein phou homolog 2; domain 2 0.9611 200 283 1.20.58.220
af_P23839_203_287_1.20.58.220 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphate transport system protein phou homolog 2; domain 2 0.9395 200 283 1.20.58.220
2w2uA00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.8162 210 283 1.20.58.80
3ss1A01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.8122 209 283 1.20.58.1190
2w2uA00 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.7793 210 283 1.20.58.80
ID Description Score Start End GO Terms
AF-A0A378RU94-F1-model_v4 deleted 0.952 189 283
AF-A0A352B3U9-F1-model_v4 Endoribonuclease YicC-like C-terminal domain-containing protein 0.9496 154 283 GO:0004521
AF-A0A520Y2F7-F1-model_v4 DUF1732 domain-containing protein 0.944 142 283 GO:0004521
AF-A0A2V7M7U9-F1-model_v4 Endoribonuclease YicC-like C-terminal domain-containing protein 0.9428 139 283 GO:0004521
AF-A0A7C1GAY3-F1-model_v4 YicC family protein 0.9414 121 283 GO:0004521

Map