F336616

General Info

Members Datasets Scaffolds Average Seq Length
224 161 215 315

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10017524|Ga0105240_100175248
Length 345
Sequence MKNFAAAQQGHFPHHEKSFLIGEMRRASIAGPSLLASAMSSFAFHSNASFMKLPPNDRARPFAVAGIAWDGAVTNRPGARFGPRAIREASHMLCDGTHPLFDLSPEDRLTDRGDLALPNTSLQAMRETMMPLAGELLRQHHMAWIGGDHSITLPLLRAYRGWLGRPLAVIHFDAHCDTWSDHFGEPSGHGTWVYEAIQEGLVQKECFVQIGIRSAGVREARDYVQDQGGLIFTARALRGLESAAQLAPVLAAIRGRLAAHGHPPLYISLDIDCLDPAFAPGTGTPEPGGMTTNQVLGLLEDLSTLPCVGMDCVEVAPSYDHAELTSNAAANFVWTYLCGQMSRST

Samples

Sample ID Description Type Environment
1 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
2 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
3 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
4 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
5 2643221592 Rhizobacter sp. Root16D2 Isolate Unclassified
6 2643221625 Rhizobacter sp. Root29 Isolate Unclassified
7 2643221648 Rhizobacter sp. Root1238 Isolate Unclassified
8 2643221660 Methylibium sp. Root1272 Isolate Unclassified
9 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
10 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
53 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
54 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
55 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
56 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
57 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
87 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
90 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
91 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
96 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
97 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
98 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
99 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
108 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
109 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
110 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
121 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
122 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
123 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
124 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
125 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
126 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
127 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
144 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
145 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
146 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
147 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
148 3300053127 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 endosphere Metagenome Endosphere
149 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
150 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
151 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
152 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
153 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
154 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
155 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
156 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
157 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
158 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
159 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
160 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
161 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.98
Metatranscriptomes 0
Isolates 4.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.09
Nodule 0
Rhizoplane 4.91
Rhizosphere 54.91
Stem 0
Stem Tuber 0
Unclassified 20.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10124313 3300003316 Bacteria 1245
2 Ga0055526_1005788 3300003771 Bacteria 6964
3 Ga0055530_10014466 3300003791 Bacteria 2626
4 Ga0065165_1000774 3300005262 Bacteria 43046
5 Ga0070676_10145147 3300005328 Bacteria 1514
6 Ga0070670_100266545 3300005331 Bacteria 1494
7 Ga0070670_100289157 3300005331 Bacteria 1432
8 Ga0070666_10012555 3300005335 Bacteria 5348
9 Ga0068868_100024217 3300005338 Bacteria 4603
10 Ga0070687_100008904 3300005343 Bacteria 4271
11 Ga0070669_100238756 3300005353 Bacteria 1443
12 Ga0070675_100178859 3300005354 Bacteria 1833
13 Ga0070671_100008714 3300005355 Bacteria 8138
14 Ga0070671_100016221 3300005355 Bacteria 6024
15 Ga0070673_100181123 3300005364 Bacteria 1804
16 Ga0070667_100060847 3300005367 Bacteria 3196
17 Ga0070667_100203995 3300005367 Bacteria 1755
18 Ga0070678_100123176 3300005456 Bacteria 2048
19 Ga0070662_100001654 3300005457 Bacteria 13712
20 Ga0070685_10217784 3300005466 Bacteria 1249
21 Ga0070672_100098470 3300005543 Bacteria 2369
22 Ga0070665_100014486 3300005548 Bacteria 7909
23 Ga0070665_100075505 3300005548 Bacteria 3377
24 Ga0068852_100020614 3300005616 Bacteria 5244
25 Ga0068859_100129872 3300005617 Bacteria 2591
26 Ga0068859_100152412 3300005617 Bacteria 2387
27 Ga0068863_100006370 3300005841 Bacteria 11578
28 Ga0068863_100008865 3300005841 Bacteria 9823
29 Ga0068858_100062783 3300005842 Bacteria 3435
30 Ga0068860_100014422 3300005843 Bacteria 7741
31 Ga0068862_100517362 3300005844 Bacteria 1135
32 Ga0075362_10117632 3300006177 Bacteria 1256
33 Ga0075366_10042233 3300006195 Bacteria 2699
34 Ga0097621_100071027 3300006237 Bacteria 2876
35 Ga0075370_10015229 3300006353 Bacteria 4112
36 Ga0068871_100082261 3300006358 Bacteria 2669
37 Ga0097620_100129864 3300006931 Bacteria 2591
38 Ga0097620_100152410 3300006931 Bacteria 2387
39 Ga0105240_10017524 3300009093 Bacteria 9650
40 Ga0105245_10072150 3300009098 Bacteria 3136
41 Ga0105248_10014455 3300009177 Bacteria 8689
42 Ga0105237_10000296 3300009545 Bacteria 68633
43 Ga0105238_10005662 3300009551 Bacteria 12348
44 Ga0105239_10000250 3300010375 Bacteria 80439
45 Ga0157374_10024041 3300013296 Bacteria 5457
46 Ga0157378_10227728 3300013297 Bacteria 1775
47 Ga0163162_10016876 3300013306 Bacteria 7137
48 Ga0163162_10118311 3300013306 Bacteria 2751
49 Ga0157375_10115834 3300013308 Bacteria 2783
50 Ga0163163_10051390 3300014325 Bacteria 4065
51 Ga0163163_10236647 3300014325 Bacteria 1875
52 Ga0157379_10012835 3300014968 Bacteria 7326
53 Ga0157379_10023777 3300014968 Bacteria 5440
54 Ga0157376_10128294 3300014969 Bacteria 2259
55 Ga0213872_10012109 3300021361 Bacteria 4066
56 Ga0207425_1000170 3300025245 Bacteria 53604
57 Ga0207425_1000435 3300025245 Bacteria 27645
58 Ga0209129_1000115 3300025258 Bacteria 141048
59 Ga0209673_1007736 3300025273 Bacteria 4892
60 Ga0209673_1017765 3300025273 Bacteria 2612
61 Ga0209025_1009840 3300025294 Bacteria 6588
62 Ga0209564_1000053 3300025295 Bacteria 351452
63 Ga0209758_1000089 3300025297 Bacteria 251523
64 Ga0209758_1000225 3300025297 Bacteria 121158
65 Ga0209758_1000394 3300025297 Bacteria 75557
66 Ga0209050_1000374 3300025298 Bacteria 85298
67 Ga0209256_1015888 3300025299 Bacteria 2604
68 Ga0209051_1000747 3300025303 Bacteria 34939
69 Ga0209051_1030076 3300025303 Bacteria 2114
70 Ga0207682_10059531 3300025893 Bacteria 1596
71 Ga0207642_10075481 3300025899 Bacteria 1619
72 Ga0207695_10010908 3300025913 Bacteria 11054
73 Ga0207671_10007663 3300025914 Bacteria 9325
74 Ga0207681_10187434 3300025923 Bacteria 1580
75 Ga0207694_10040915 3300025924 Bacteria 3571
76 Ga0207644_10024748 3300025931 Bacteria 4124
77 Ga0207706_10000754 3300025933 Bacteria 33680
78 Ga0207711_10039045 3300025941 Bacteria 4037
79 Ga0207658_10172175 3300025986 Bacteria 1784
80 Ga0207658_10492534 3300025986 Bacteria 1091
81 Ga0207703_10110476 3300026035 Bacteria 2345
82 Ga0207641_10052871 3300026088 Bacteria 3441
83 Ga0207641_10063480 3300026088 Bacteria 3155
84 Ga0207676_10448862 3300026095 Bacteria 1215
85 Ga0207698_10011989 3300026142 Bacteria 5649
86 Ga0209996_1000686 3300027395 Bacteria 4048
87 Ga0209995_1012302 3300027471 Bacteria 1395
88 Ga0209968_1000193 3300027526 Bacteria 10578
89 Ga0209970_1000438 3300027614 Bacteria 7106
90 Ga0209966_1000031 3300027695 Bacteria 63685
91 Ga0209998_10002900 3300027717 Bacteria 3842
92 Ga0209974_10003235 3300027876 Bacteria 5888
93 Ga0209974_10014779 3300027876 Bacteria 2594
94 Ga0268266_10025377 3300028379 Bacteria 5042
95 Ga0268266_10061890 3300028379 Bacteria 3228
96 Ga0265334_10032204 3300028573 Bacteria 2092
97 Ga0307517_10003945 3300028786 Bacteria 22979
98 Ga0307517_10130894 3300028786 Bacteria 1807
99 Ga0307515_10000006 3300028794 Bacteria 725810
100 Ga0307515_10000043 3300028794 Bacteria 304612
101 Ga0307515_10000521 3300028794 Bacteria 91558
102 Ga0307515_10000652 3300028794 Bacteria 80185
103 Ga0307515_10001063 3300028794 Bacteria 62886
104 Ga0307515_10200650 3300028794 Bacteria 1871
105 Ga0265338_10153216 3300028800 Bacteria 1789
106 Ga0307512_10034998 3300030522 Bacteria 4288
107 Ga0307512_10127473 3300030522 Bacteria 1610
108 Ga0265328_10000063 3300031239 Bacteria 61942
109 Ga0265327_10119562 3300031251 Bacteria 1250
110 Ga0307513_10027318 3300031456 Bacteria 6556
111 Ga0307513_10114790 3300031456 Bacteria 2677
112 Ga0307513_10256563 3300031456 Bacteria 1541
113 Ga0307509_10000120 3300031507 Bacteria 114238
114 Ga0307509_10003007 3300031507 Bacteria 26366
115 Ga0307509_10031296 3300031507 Bacteria 5876
116 Ga0307509_10085108 3300031507 Bacteria 3255
117 Ga0307508_10000163 3300031616 Bacteria 80086
118 Ga0307508_10000385 3300031616 Bacteria 53049
119 Ga0307508_10001852 3300031616 Bacteria 23364
120 Ga0307508_10284314 3300031616 Bacteria 1247
121 Ga0307514_10001133 3300031649 Bacteria 36650
122 Ga0307514_10002111 3300031649 Bacteria 21455
123 Ga0316576_10167838 3300031727 Bacteria 1656
124 Ga0307516_10000058 3300031730 Bacteria 121424
125 Ga0307516_10000381 3300031730 Bacteria 58016
126 Ga0307516_10000860 3300031730 Bacteria 41628
127 Ga0307516_10103053 3300031730 Bacteria 2667
128 Ga0307507_10039300 3300033179 Bacteria 4778
129 Ga0307507_10172221 3300033179 Bacteria 1570
130 Ga0307510_10055179 3300033180 Bacteria 4152
131 Ga0373932_0017827 3300035112 Bacteria 1828
132 Ga0316574_0002815 3300035398 Bacteria 8826
133 Ga0373931_0025715 3300035691 Bacteria 2990
134 Ga0373937_0032730 3300036401 Bacteria 4717
135 Ga0395905_0035822 3300037471 Bacteria 4660
136 Ga0436361_0272905 3300039447 Bacteria 8081
137 Ga0451793_0069277 3300041452 Bacteria 1278
138 Ga0451793_1257616 3300041452 Bacteria 2441
139 Ga0451800_0540481 3300041459 Bacteria 3874
140 Ga0451804_0523531 3300041463 Bacteria 2519
141 Ga0450911_000100 3300042115 Bacteria 34941
142 Ga0451577_0000194 3300042876 Bacteria 127614
143 Ga0451577_0006279 3300042876 Bacteria 11901
144 Ga0451577_0007328 3300042876 Bacteria 10857
145 Ga0451577_0065917 3300042876 Bacteria 3229
146 Ga0451577_0162862 3300042876 Bacteria 2009
147 Ga0466972_0001178 3300044658 Bacteria 12542
148 Ga0453684_0000218 3300044712 Bacteria 250267
149 Ga0453684_0006975 3300044712 Bacteria 21145
150 Ga0453684_0097276 3300044712 Bacteria 3613
151 Ga0453684_0223749 3300044712 Bacteria 2178
152 Ga0453684_0641559 3300044712 Bacteria 1160
153 Ga0451576_0000643 3300045051 Bacteria 72224
154 Ga0451576_0010372 3300045051 Bacteria 10697
155 Ga0451576_0260239 3300045051 Bacteria 1813
156 Ga0451576_0280523 3300045051 Bacteria 1742
157 Ga0451576_1129879 3300045051 Bacteria 819
158 Ga0495592_0000222 3300046454 Bacteria 48902
159 Ga0495638_0036816 3300046460 Bacteria 3115
160 Ga0495650_0000263 3300046471 Bacteria 101749
161 Ga0495650_0017208 3300046471 Bacteria 3629
162 Ga0495596_0002034 3300046500 Bacteria 11104
163 Ga0495606_0000857 3300046507 Bacteria 45724
164 Ga0495620_0048034 3300046515 Bacteria 1834
165 Ga0495632_0018079 3300046519 Bacteria 3875
166 Ga0495621_0004257 3300046539 Bacteria 4005
167 Ga0495622_0000027 3300046557 Bacteria 135256
168 Ga0495668_0027429 3300046616 Bacteria 3227
169 Ga0495625_0009702 3300046660 Bacteria 8015
170 Ga0495669_0005510 3300046684 Bacteria 5285
171 Ga0495671_0002853 3300046692 Bacteria 10813
172 Ga0495686_0005070 3300047472 Bacteria 10552
173 Ga0495593_0068334 3300047673 Bacteria 1849
174 Ga0496102_0019722 3300048905 Bacteria 5943
175 Ga0496106_0078938 3300048909 Bacteria 2527
176 Ga0496108_0073344 3300048911 Bacteria 2889
177 Ga0496109_0012449 3300048912 Bacteria 7344
178 Ga0496111_0079986 3300048914 Bacteria 2384
179 Ga0496113_0168744 3300048916 Bacteria 1733
180 Ga0496114_0114990 3300048917 Bacteria 2308
181 Ga0496121_0009096 3300048924 Bacteria 11496
182 Ga0496124_0000772 3300048927 Bacteria 52180
183 Ga0496124_0011132 3300048927 Bacteria 9025
184 Ga0496125_0006005 3300048928 Bacteria 13294
185 Ga0496125_0007835 3300048928 Bacteria 11287
186 Ga0496125_0015408 3300048928 Bacteria 7398
187 Ga0496125_0203546 3300048928 Bacteria 1293
188 Ga0496126_0063185 3300048929 Bacteria 3320
189 Ga0496126_0258158 3300048929 Bacteria 1450
190 nmdc:mga03683_6923_c2 3300050489 Bacteria 2405
191 nmdc:mga0k408_1301_c1 3300050493 Bacteria 13499
192 nmdc:mga0k408_133588_c1 3300050493 Bacteria 1474
193 nmdc:mga0k408_17227_c1 3300050493 Bacteria 4022
194 nmdc:mga0k408_79198_c1 3300050493 Bacteria 1923
195 nmdc:mga07m45_22083_c1 3300050496 Bacteria 3473
196 nmdc:mga07m45_2234_c1 3300050496 Bacteria 9046
197 Ga0500578_0000683 3300053086 Bacteria 40592
198 Ga0500644_0126999 3300053088 Bacteria 1000
199 Ga0500646_0010453 3300053090 Bacteria 2381
200 Ga0500650_0011129 3300053098 Bacteria 3690
201 Ga0500623_051443 3300053127 Bacteria 2070
202 Ga0500628_002409 3300053129 Bacteria 3100
203 Ga0500642_0081053 3300053130 Bacteria 1490
204 Ga0500652_001191 3300053131 Bacteria 8292
205 Ga0500561_0028300 3300053137 Bacteria 1389
206 Ga0500577_0015938 3300053142 Bacteria 2359
207 Ga0500604_0009453 3300053151 Bacteria 2598
208 Ga0500619_017810 3300053154 Bacteria 1983
209 Ga0500622_0000001 3300053156 Bacteria 657715
210 Ga0500622_0000028 3300053156 Bacteria 218994
211 Ga0500627_0092505 3300053158 Bacteria 1354
212 Ga0500637_0199599 3300053178 Bacteria 1140
213 Ga0500570_056218 3300053724 Bacteria 1940
214 Ga0500587_003342 3300053739 Bacteria 2248
215 Ga0590071_013939 3300059421 Bacteria 1883

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_1129879 Ga0451576_1129879_11_778 244
2 3300047673 Ga0495593_0068334 Ga0495593_0068334_468_1310 270
3 3300031727 Ga0316576_10167838 Ga0316576_101678382 282
4 3300035398 Ga0316574_0002815 Ga0316574_0002815_3869_4855 282
5 3300027717 Ga0209998_10002900 Ga0209998_100029002 285
6 3300027876 Ga0209974_10003235 Ga0209974_100032351 285
7 3300005331 Ga0070670_100289157 Ga0070670_1002891572 287
8 3300025931 Ga0207644_10024748 Ga0207644_100247482 287
9 3300028794 Ga0307515_10000043 Ga0307515_1000004396 288
10 iso_pu_bacteria 2919704043 2919708254 288
11 3300028573 Ga0265334_10032204 Ga0265334_100322043 291
12 3300028800 Ga0265338_10153216 Ga0265338_101532162 291
13 3300031251 Ga0265327_10119562 Ga0265327_101195622 291
14 3300042876 Ga0451577_0006279 Ga0451577_0006279_7879_8823 291
15 3300027614 Ga0209970_1000438 Ga0209970_10004381 292
16 3300027876 Ga0209974_10014779 Ga0209974_100147793 292
17 3300046519 Ga0495632_0018079 Ga0495632_0018079_368_1276 292
18 iso_pu_bacteria 2585428057 2587729505 292
19 iso_pu_bacteria 2643221660 2644337829 292
20 iso_pu_bacteria 2585428062 2587755044 293
21 iso_pu_bacteria 2588253510 2588294582 293
22 iso_pu_bacteria 2643221592 2643969642 293
23 iso_pu_bacteria 2643221625 2644143942 293
24 iso_pu_bacteria 2643221648 2644276351 293
25 3300005367 Ga0070667_100203995 Ga0070667_1002039952 294
26 3300025245 Ga0207425_1000170 Ga0207425_100017034 294
27 3300025294 Ga0209025_1009840 Ga0209025_10098402 294
28 3300025297 Ga0209758_1000394 Ga0209758_100039449 294
29 3300048924 Ga0496121_0009096 Ga0496121_0009096_863_1801 294
30 3300048927 Ga0496124_0000772 Ga0496124_0000772_10369_11307 294
31 3300048928 Ga0496125_0015408 Ga0496125_0015408_2264_3202 294
32 3300048929 Ga0496126_0258158 Ga0496126_0258158_377_1315 294
33 3300059421 Ga0590071_013939 Ga0590071_013939_918_1856 294
34 3300035112 Ga0373932_0017827 Ga0373932_0017827_393_1310 295
35 3300035691 Ga0373931_0025715 Ga0373931_0025715_1394_2311 295
36 3300042876 Ga0451577_0000194 Ga0451577_0000194_49584_50570 295
37 3300044712 Ga0453684_0000218 Ga0453684_0000218_108115_109101 295
38 3300045051 Ga0451576_0000643 Ga0451576_0000643_44802_45818 295
39 3300046471 Ga0495650_0000263 Ga0495650_0000263_99673_100599 295
40 3300005457 Ga0070662_100001654 Ga0070662_10000165411 296
41 3300005617 Ga0068859_100152412 Ga0068859_1001524122 296
42 3300006195 Ga0075366_10042233 Ga0075366_100422331 296
43 3300006931 Ga0097620_100152410 Ga0097620_1001524102 296
44 3300014325 Ga0163163_10236647 Ga0163163_102366472 296
45 3300025303 Ga0209051_1000747 Ga0209051_100074716 296
46 3300025933 Ga0207706_10000754 Ga0207706_100007546 296
47 3300025986 Ga0207658_10492534 Ga0207658_104925341 296
48 3300028786 Ga0307517_10003945 Ga0307517_100039456 296
49 3300028794 Ga0307515_10000006 Ga0307515_10000006248 296
50 3300030522 Ga0307512_10034998 Ga0307512_100349983 296
51 3300031507 Ga0307509_10000120 Ga0307509_1000012052 296
52 3300031507 Ga0307509_10003007 Ga0307509_1000300715 296
53 3300031507 Ga0307509_10085108 Ga0307509_100851083 296
54 3300031616 Ga0307508_10000163 Ga0307508_1000016353 296
55 3300031616 Ga0307508_10284314 Ga0307508_102843142 296
56 3300033179 Ga0307507_10172221 Ga0307507_101722212 296
57 3300033180 Ga0307510_10055179 Ga0307510_100551792 296
58 3300036401 Ga0373937_0032730 Ga0373937_0032730_3542_4495 296
59 3300042876 Ga0451577_0007328 Ga0451577_0007328_1021_1965 296
60 3300042876 Ga0451577_0162862 Ga0451577_0162862_649_1569 296
61 3300044658 Ga0466972_0001178 Ga0466972_0001178_5174_6094 296
62 3300044712 Ga0453684_0006975 Ga0453684_0006975_14982_15932 296
63 3300044712 Ga0453684_0097276 Ga0453684_0097276_757_1677 296
64 3300044712 Ga0453684_0641559 Ga0453684_0641559_216_1136 296
65 3300045051 Ga0451576_0010372 Ga0451576_0010372_453_1373 296
66 3300045051 Ga0451576_0260239 Ga0451576_0260239_625_1545 296
67 3300046454 Ga0495592_0000222 Ga0495592_0000222_30707_31648 296
68 3300046471 Ga0495650_0017208 Ga0495650_0017208_1784_2731 296
69 3300046507 Ga0495606_0000857 Ga0495606_0000857_43368_44300 296
70 3300046557 Ga0495622_0000027 Ga0495622_0000027_1273_2214 296
71 3300050493 nmdc:mga0k408_17227_c1 nmdc:mga0k408_17227_c1_796_1716 296
72 3300053154 Ga0500619_017810 Ga0500619_017810_946_1887 296
73 3300003771 Ga0055526_1005788 Ga0055526_10057883 297
74 3300003791 Ga0055530_10014466 Ga0055530_100144663 297
75 3300005262 Ga0065165_1000774 Ga0065165_100077431 297
76 3300005328 Ga0070676_10145147 Ga0070676_101451471 297
77 3300005331 Ga0070670_100266545 Ga0070670_1002665451 297
78 3300005353 Ga0070669_100238756 Ga0070669_1002387561 297
79 3300005354 Ga0070675_100178859 Ga0070675_1001788591 297
80 3300005355 Ga0070671_100016221 Ga0070671_1000162214 297
81 3300005364 Ga0070673_100181123 Ga0070673_1001811232 297
82 3300005456 Ga0070678_100123176 Ga0070678_1001231763 297
83 3300005543 Ga0070672_100098470 Ga0070672_1000984702 297
84 3300005548 Ga0070665_100075505 Ga0070665_1000755053 297
85 3300005617 Ga0068859_100129872 Ga0068859_1001298722 297
86 3300005841 Ga0068863_100008865 Ga0068863_1000088657 297
87 3300006177 Ga0075362_10117632 Ga0075362_101176322 297
88 3300006353 Ga0075370_10015229 Ga0075370_100152291 297
89 3300006931 Ga0097620_100129864 Ga0097620_1001298642 297
90 3300009093 Ga0105240_10017524 Ga0105240_100175248 297
91 3300009545 Ga0105237_10000296 Ga0105237_1000029637 297
92 3300009551 Ga0105238_10005662 Ga0105238_1000566210 297
93 3300010375 Ga0105239_10000250 Ga0105239_1000025048 297
94 3300013306 Ga0163162_10118311 Ga0163162_101183112 297
95 3300013308 Ga0157375_10115834 Ga0157375_101158342 297
96 3300014968 Ga0157379_10012835 Ga0157379_100128356 297
97 3300021361 Ga0213872_10012109 Ga0213872_100121092 297
98 3300025245 Ga0207425_1000435 Ga0207425_10004357 297
99 3300025258 Ga0209129_1000115 Ga0209129_100011577 297
100 3300025273 Ga0209673_1007736 Ga0209673_10077363 297
101 3300025273 Ga0209673_1017765 Ga0209673_10177652 297
102 3300025295 Ga0209564_1000053 Ga0209564_100005357 297
103 3300025297 Ga0209758_1000089 Ga0209758_1000089181 297
104 3300025297 Ga0209758_1000225 Ga0209758_100022557 297
105 3300025298 Ga0209050_1000374 Ga0209050_100037417 297
106 3300025299 Ga0209256_1015888 Ga0209256_10158881 297
107 3300025303 Ga0209051_1030076 Ga0209051_10300763 297
108 3300025893 Ga0207682_10059531 Ga0207682_100595312 297
109 3300025913 Ga0207695_10010908 Ga0207695_1001090812 297
110 3300025914 Ga0207671_10007663 Ga0207671_100076635 297
111 3300025923 Ga0207681_10187434 Ga0207681_101874341 297
112 3300025924 Ga0207694_10040915 Ga0207694_100409155 297
113 3300026088 Ga0207641_10063480 Ga0207641_100634803 297
114 3300027395 Ga0209996_1000686 Ga0209996_10006863 297
115 3300027471 Ga0209995_1012302 Ga0209995_10123021 297
116 3300027526 Ga0209968_1000193 Ga0209968_10001932 297
117 3300027695 Ga0209966_1000031 Ga0209966_100003136 297
118 3300028379 Ga0268266_10061890 Ga0268266_100618903 297
119 3300028786 Ga0307517_10130894 Ga0307517_101308942 297
120 3300028794 Ga0307515_10000521 Ga0307515_1000052116 297
121 3300028794 Ga0307515_10000652 Ga0307515_1000065254 297
122 3300028794 Ga0307515_10001063 Ga0307515_1000106333 297
123 3300028794 Ga0307515_10200650 Ga0307515_102006501 297
124 3300030522 Ga0307512_10127473 Ga0307512_101274732 297
125 3300031239 Ga0265328_10000063 Ga0265328_1000006319 297
126 3300031456 Ga0307513_10027318 Ga0307513_100273183 297
127 3300031456 Ga0307513_10114790 Ga0307513_101147902 297
128 3300031456 Ga0307513_10256563 Ga0307513_102565631 297
129 3300031507 Ga0307509_10031296 Ga0307509_100312964 297
130 3300031616 Ga0307508_10000385 Ga0307508_1000038534 297
131 3300031616 Ga0307508_10001852 Ga0307508_1000185218 297
132 3300031649 Ga0307514_10001133 Ga0307514_1000113321 297
133 3300031649 Ga0307514_10002111 Ga0307514_100021119 297
134 3300031730 Ga0307516_10000058 Ga0307516_1000005864 297
135 3300031730 Ga0307516_10000381 Ga0307516_1000038129 297
136 3300031730 Ga0307516_10000860 Ga0307516_100008607 297
137 3300031730 Ga0307516_10103053 Ga0307516_101030532 297
138 3300033179 Ga0307507_10039300 Ga0307507_100393003 297
139 3300037471 Ga0395905_0035822 Ga0395905_0035822_110_1069 297
140 3300039447 Ga0436361_0272905 Ga0436361_0272905_923_1855 297
141 3300041452 Ga0451793_0069277 Ga0451793_0069277_185_1198 297
142 3300041452 Ga0451793_1257616 Ga0451793_1257616_457_1395 297
143 3300041459 Ga0451800_0540481 Ga0451800_0540481_81_1019 297
144 3300041463 Ga0451804_0523531 Ga0451804_0523531_1309_2247 297
145 3300042115 Ga0450911_000100 Ga0450911_000100_31829_32755 297
146 3300042876 Ga0451577_0065917 Ga0451577_0065917_941_1891 297
147 3300044712 Ga0453684_0223749 Ga0453684_0223749_111_1061 297
148 3300045051 Ga0451576_0280523 Ga0451576_0280523_164_1102 297
149 3300046460 Ga0495638_0036816 Ga0495638_0036816_1925_2863 297
150 3300046515 Ga0495620_0048034 Ga0495620_0048034_378_1391 297
151 3300046539 Ga0495621_0004257 Ga0495621_0004257_2372_3310 297
152 3300046616 Ga0495668_0027429 Ga0495668_0027429_569_1528 297
153 3300046660 Ga0495625_0009702 Ga0495625_0009702_1158_2171 297
154 3300047472 Ga0495686_0005070 Ga0495686_0005070_2843_3805 297
155 3300048905 Ga0496102_0019722 Ga0496102_0019722_4675_5601 297
156 3300048916 Ga0496113_0168744 Ga0496113_0168744_314_1264 297
157 3300048927 Ga0496124_0011132 Ga0496124_0011132_6604_7542 297
158 3300048928 Ga0496125_0006005 Ga0496125_0006005_11000_11938 297
159 3300048928 Ga0496125_0007835 Ga0496125_0007835_3785_4711 297
160 3300048928 Ga0496125_0203546 Ga0496125_0203546_110_1147 297
161 3300048929 Ga0496126_0063185 Ga0496126_0063185_1415_2353 297
162 3300050489 nmdc:mga03683_6923_c2 nmdc:mga03683_6923_c2_869_1846 297
163 3300050493 nmdc:mga0k408_1301_c1 nmdc:mga0k408_1301_c1_11768_12745 297
164 3300050493 nmdc:mga0k408_133588_c1 nmdc:mga0k408_133588_c1_90_1103 297
165 3300050493 nmdc:mga0k408_79198_c1 nmdc:mga0k408_79198_c1_32_1000 297
166 3300050496 nmdc:mga07m45_22083_c1 nmdc:mga07m45_22083_c1_2261_3274 297
167 3300050496 nmdc:mga07m45_2234_c1 nmdc:mga07m45_2234_c1_7903_8871 297
168 3300053086 Ga0500578_0000683 Ga0500578_0000683_9558_10508 297
169 3300053088 Ga0500644_0126999 Ga0500644_0126999_31_957 297
170 3300053090 Ga0500646_0010453 Ga0500646_0010453_1424_2362 297
171 3300053098 Ga0500650_0011129 Ga0500650_0011129_1895_2833 297
172 3300053127 Ga0500623_051443 Ga0500623_051443_367_1305 297
173 3300053129 Ga0500628_002409 Ga0500628_002409_1001_1939 297
174 3300053130 Ga0500642_0081053 Ga0500642_0081053_225_1169 297
175 3300053131 Ga0500652_001191 Ga0500652_001191_3870_4808 297
176 3300053137 Ga0500561_0028300 Ga0500561_0028300_232_1155 297
177 3300053142 Ga0500577_0015938 Ga0500577_0015938_777_1715 297
178 3300053151 Ga0500604_0009453 Ga0500604_0009453_587_1537 297
179 3300053156 Ga0500622_0000001 Ga0500622_0000001_265307_266266 297
180 3300053156 Ga0500622_0000028 Ga0500622_0000028_182026_182964 297
181 3300053158 Ga0500627_0092505 Ga0500627_0092505_255_1178 297
182 3300053178 Ga0500637_0199599 Ga0500637_0199599_160_1116 297
183 3300053724 Ga0500570_056218 Ga0500570_056218_718_1644 297
184 3300053739 Ga0500587_003342 Ga0500587_003342_929_1942 297
185 iso_pu_bacteria 2585428058 2587733980 297
186 3300005616 Ga0068852_100020614 Ga0068852_1000206144 298
187 3300026142 Ga0207698_10011989 Ga0207698_100119893 298
188 3300005335 Ga0070666_10012555 Ga0070666_100125552 299
189 3300005338 Ga0068868_100024217 Ga0068868_1000242173 299
190 3300005343 Ga0070687_100008904 Ga0070687_1000089042 299
191 3300005355 Ga0070671_100008714 Ga0070671_1000087144 299
192 3300005367 Ga0070667_100060847 Ga0070667_1000608472 299
193 3300005466 Ga0070685_10217784 Ga0070685_102177842 299
194 3300005548 Ga0070665_100014486 Ga0070665_1000144864 299
195 3300005841 Ga0068863_100006370 Ga0068863_1000063705 299
196 3300005842 Ga0068858_100062783 Ga0068858_1000627833 299
197 3300005843 Ga0068860_100014422 Ga0068860_1000144223 299
198 3300005844 Ga0068862_100517362 Ga0068862_1005173621 299
199 3300006237 Ga0097621_100071027 Ga0097621_1000710272 299
200 3300006358 Ga0068871_100082261 Ga0068871_1000822612 299
201 3300009098 Ga0105245_10072150 Ga0105245_100721502 299
202 3300009177 Ga0105248_10014455 Ga0105248_100144553 299
203 3300013296 Ga0157374_10024041 Ga0157374_100240413 299
204 3300013297 Ga0157378_10227728 Ga0157378_102277282 299
205 3300013306 Ga0163162_10016876 Ga0163162_100168764 299
206 3300014325 Ga0163163_10051390 Ga0163163_100513902 299
207 3300014968 Ga0157379_10023777 Ga0157379_100237774 299
208 3300014969 Ga0157376_10128294 Ga0157376_101282942 299
209 3300025899 Ga0207642_10075481 Ga0207642_100754812 299
210 3300025941 Ga0207711_10039045 Ga0207711_100390453 299
211 3300025986 Ga0207658_10172175 Ga0207658_101721752 299
212 3300026035 Ga0207703_10110476 Ga0207703_101104762 299
213 3300026088 Ga0207641_10052871 Ga0207641_100528713 299
214 3300026095 Ga0207676_10448862 Ga0207676_104488622 299
215 3300028379 Ga0268266_10025377 Ga0268266_100253772 299
216 3300046500 Ga0495596_0002034 Ga0495596_0002034_4520_5461 299
217 3300046684 Ga0495669_0005510 Ga0495669_0005510_729_1670 299
218 3300046692 Ga0495671_0002853 Ga0495671_0002853_4375_5316 299
219 3300048909 Ga0496106_0078938 Ga0496106_0078938_293_1237 299
220 3300048911 Ga0496108_0073344 Ga0496108_0073344_779_1723 299
221 3300048912 Ga0496109_0012449 Ga0496109_0012449_2095_3039 299
222 3300048914 Ga0496111_0079986 Ga0496111_0079986_1159_2103 299
223 3300048917 Ga0496114_0114990 Ga0496114_0114990_567_1511 299
224 3300003316 rootH1_10124313 rootH1_101243131 303

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00491

Arginase

Arginase family

60

339

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8c0h-assembly1.cif.gz_C error: 404 client error: for url: https://data.rcsb.org/rest/v1/core/entry/8c0h 0.8728 16 302
4dz4-assembly1.cif.gz_A x-ray crystal structure of a hypothetical agmatinase from burkholderia thailandensis 0.8605 16 297
4dz4-assembly1.cif.gz_F x-ray crystal structure of a hypothetical agmatinase from burkholderia thailandensis 0.8511 16 302
7lox-assembly1.cif.gz_B-2 the structure of agmatinase from e. coli at 3.2 a displaying guanidine in the active site 0.8466 16 303
7esr-assembly1.cif.gz_A crystal structure of synechocystis sp pcc6803 guanidinium hydrolase (r32) 0.8462 17 302
ID Description Score Start End Superfamily
4dz4A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8605 16 297 3.40.800.10
af_P60651_4_305_3.40.800.10 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8493 17 303 3.40.800.10
1gq7A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.838 16 301 3.40.800.10
af_Q57757_1_282_3.40.800.10 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8379 16 296 3.40.800.10
3pzlA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Ureohydrolase domain 0.8368 16 303 3.40.800.10
ID Description Score Start End GO Terms
AF-A0A7Y4SA31-F1-model_v4 Agmatinase 0.9734 123 303 GO:0008783
GO:0033389
GO:0046872
AF-A0A7Y4SA31-F1-model_v4 Agmatinase 0.9629 123 303 GO:0008783
GO:0033389
GO:0046872
AF-A0A1Q3QG61-F1-model_v4 deleted 0.9488 49 303
AF-A0A2N2S5N1-F1-model_v4 Agmatinase 0.9344 9 270 GO:0008783
GO:0033389
GO:0046872
AF-U3U3H5-F1-model_v4 Uncharacterized protein 0.9294 99 303 GO:0005524
GO:0005886
GO:0008783
GO:0016887
GO:0033389
GO:0046872
GO:0140359

Feature Viewer

pLDDT pTM Quality
85.78 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map