F336536

General Info

Members Datasets Scaffolds Average Seq Length
224 151 448 730

Family's Representative Sequence

Representative Sequence 3300006038|Ga0075365_10010508|Ga0075365_100105083
Length 832
Sequence LLSQTVVHGAALATPAARRLSHDLLLCKFHIKKAPDPTPIRSDAPDRAGDNAAPADPAPVTVRATSLYRDKRCTFATAIAPVYDLRDACLLRATLDRAAPSGNEDYTVSFKVHVGPPQIAIHQGQTVLVSEPDGRINWPSEKGLYFRDTRIVSNWAIYANGEPWELLNGGPVSYYAARIFLTNGTILTEDGTIPPRTLGLTISRSISGGLHEDLDITNNSMKPVRFQLEIAFRCDFADIFEVKSGRIVRRGQITTEWSERRQRVRTSYSNRDFHRAVTTSVLHAPGKAVSANGRLSFEVALQAGEAWHACLLYMLEDGDQRFAAPQDCVGKSNKSRHSETMADWLQTVVKIETSNEEFYRLFHQALEDMAALRLPIKGTSHMVFLPAAGLPWFVAPFGRDSLIVSLQNMLIYPEFARGALEILGSLQAKEDDPYRDAEPGKILHELRCGELAHFKLIPHTPYYGTADATALYLMTLHAAWRATGDAALLEQHLETAEGCLAWIDNYGDRDGDGFQEYQTRSSVGYENMAWKDSGDSVMYPDGSLVKGPKALCELQGYVYNAWIRMAEAFDALGKPERAHELRAKAAVLFERFNDAFWDEELGFYAYALDGDKNKVLTVASNAGHCLWSGIVPPERAKRVVDRLMAPDMWTGWGIRTLSANHPAFNPYNYQTGSVWPHDNAIIAMGFKLYGFAAEAAQVAHDVSVAASHFLLNQLPELYTASERDETNFPVQYIGANVPQAWAAGSVFMLVQALLGFLPDAPRNKLYVDPSLPAWLPDLTVRDLRIGKHKLDIRFTRGRDQTTFEVIKGDPKLVERCDIASKAGQLRTASDLI

Samples

Sample ID Description Type Environment
1 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
59 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
83 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
84 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
85 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
95 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
96 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
97 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
102 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
103 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
104 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
105 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
111 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
112 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
113 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
114 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
120 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
121 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
122 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
146 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
147 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
148 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule
149 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
150 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
151 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.32
Metatranscriptomes 0.45
Isolates 2.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.34
Nodule 1.34
Rhizoplane 4.91
Rhizosphere 89.73
Stem 0
Stem Tuber 0
Unclassified 1.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075365_10010508 3300006038 Bacteria 5393
2 JGI25404J52841_10004236 3300003659 Bacteria 2890
3 JGI25405J52794_10004431 3300003911 Bacteria 2507
4 Ga0065715_10005577 3300005293 Bacteria 3920
5 Ga0070670_100060793 3300005331 Bacteria 3244
6 Ga0068869_100026313 3300005334 Bacteria 4049
7 Ga0070680_100023710 3300005336 Bacteria 4897
8 Ga0070680_100025159 3300005336 Bacteria 4756
9 Ga0070671_100003779 3300005355 Bacteria 11877
10 Ga0070674_100049567 3300005356 Bacteria 2887
11 Ga0070673_100002446 3300005364 Bacteria 11313
12 Ga0070709_10027945 3300005434 Bacteria 3359
13 Ga0070714_100007974 3300005435 Bacteria 8250
14 Ga0070714_100027910 3300005435 Bacteria 4677
15 Ga0070714_100062795 3300005435 Bacteria 3192
16 Ga0070713_100012009 3300005436 Bacteria 6339
17 Ga0070713_100016611 3300005436 Bacteria 5536
18 Ga0070713_100105500 3300005436 Bacteria 2448
19 Ga0070710_10033276 3300005437 Bacteria 2798
20 Ga0070701_10010170 3300005438 Bacteria 4149
21 Ga0070705_100000470 3300005440 Bacteria 23186
22 Ga0070700_100002024 3300005441 Bacteria 10300
23 Ga0070681_10040514 3300005458 Bacteria 4666
24 Ga0068867_100057364 3300005459 Bacteria 2884
25 Ga0070706_100024261 3300005467 Bacteria 5583
26 Ga0070698_100017526 3300005471 Bacteria 7547
27 Ga0070699_100004992 3300005518 Bacteria 11697
28 Ga0070699_100061629 3300005518 Bacteria 3250
29 Ga0070697_100024297 3300005536 Bacteria 4824
30 Ga0070695_100001278 3300005545 Bacteria 13874
31 Ga0070695_100010034 3300005545 Bacteria 5649
32 Ga0070665_100022955 3300005548 Bacteria 6283
33 Ga0070665_100048987 3300005548 Bacteria 4240
34 Ga0070704_100004712 3300005549 Bacteria 7889
35 Ga0068859_100004567 3300005617 Bacteria 14118
36 Ga0068864_100063068 3300005618 Unclassified 3212
37 Ga0068860_100017050 3300005843 Bacteria 7080
38 Ga0068862_100006040 3300005844 Bacteria 10084
39 Ga0081455_10000858 3300005937 Bacteria 39172
40 Ga0081455_10001435 3300005937 Bacteria 29489
41 Ga0081455_10026721 3300005937 Bacteria 5300
42 Ga0081538_10011414 3300005981 Bacteria 7198
43 Ga0081540_1000066 3300005983 Bacteria 115420
44 Ga0081540_1000081 3300005983 Bacteria 102423
45 Ga0081540_1000190 3300005983 Bacteria 63614
46 Ga0081540_1000818 3300005983 Bacteria 28473
47 Ga0081540_1027931 3300005983 Bacteria 3183
48 Ga0070717_10013201 3300006028 Bacteria 6319
49 Ga0070717_10020282 3300006028 Bacteria 5224
50 Ga0070717_10097138 3300006028 Bacteria 2496
51 Ga0070712_100002806 3300006175 Bacteria 10774
52 Ga0070712_100003860 3300006175 Bacteria 9225
53 Ga0070712_100010684 3300006175 Bacteria 5797
54 Ga0070712_100042579 3300006175 Bacteria 3123
55 Ga0075367_10027536 3300006178 Bacteria 3235
56 Ga0075427_10002137 3300006194 Unclassified 2624
57 Ga0075428_100069794 3300006844 Bacteria 3841
58 Ga0075428_100129763 3300006844 Bacteria 2742
59 Ga0075430_100010799 3300006846 Bacteria 7737
60 Ga0075430_100029864 3300006846 Bacteria 4628
61 Ga0075430_100035063 3300006846 Bacteria 4259
62 Ga0075431_100000211 3300006847 Bacteria 43098
63 Ga0075431_100001079 3300006847 Bacteria 24398
64 Ga0075431_100090789 3300006847 Bacteria 3153
65 Ga0075433_10041113 3300006852 Bacteria 4004
66 Ga0075433_10060861 3300006852 Bacteria 3307
67 Ga0075434_100000986 3300006871 Bacteria 23010
68 Ga0075434_100010219 3300006871 Bacteria 8791
69 Ga0075429_100022717 3300006880 Bacteria 5437
70 Ga0097620_100004567 3300006931 Bacteria 14118
71 Ga0075435_100064055 3300007076 Bacteria 2986
72 Ga0111539_10002157 3300009094 Bacteria 26335
73 Ga0111539_10137031 3300009094 Bacteria 2866
74 Ga0111539_10137651 3300009094 Bacteria 2859
75 Ga0114129_10020915 3300009147 Bacteria 9296
76 Ga0105248_10145761 3300009177 Bacteria 2672
77 Ga0105237_10094692 3300009545 Bacteria 2975
78 Ga0105249_10014645 3300009553 Bacteria 6934
79 Ga0105246_10002296 3300011119 Bacteria 11535
80 Ga0157370_10027637 3300013104 Bacteria 5593
81 Ga0157369_10021763 3300013105 Bacteria 7170
82 Ga0157372_10028978 3300013307 Bacteria 6040
83 Ga0163163_10092613 3300014325 Bacteria 3038
84 Ga0157380_10079798 3300014326 Bacteria 2673
85 Ga0163161_10027212 3300017792 Bacteria 4056
86 Ga0213871_10000119 3300021441 Bacteria 7620
87 Ga0207653_10000759 3300025885 Bacteria 11009
88 Ga0207692_10006939 3300025898 Bacteria 4617
89 Ga0207692_10014920 3300025898 Bacteria 3406
90 Ga0207693_10012612 3300025915 Bacteria 6828
91 Ga0207693_10017919 3300025915 Bacteria 5645
92 Ga0207693_10020425 3300025915 Bacteria 5268
93 Ga0207693_10036777 3300025915 Bacteria 3860
94 Ga0207693_10044564 3300025915 Bacteria 3487
95 Ga0207693_10054625 3300025915 Bacteria 3133
96 Ga0207693_10063842 3300025915 Bacteria 2885
97 Ga0207693_10073946 3300025915 Bacteria 2668
98 Ga0207663_10000075 3300025916 Bacteria 47189
99 Ga0207663_10021641 3300025916 Bacteria 3664
100 Ga0207660_10032077 3300025917 Bacteria 3624
101 Ga0207646_10079008 3300025922 Bacteria 2941
102 Ga0207700_10025806 3300025928 Bacteria 4087
103 Ga0207700_10072468 3300025928 Bacteria 2656
104 Ga0207664_10016239 3300025929 Bacteria 5426
105 Ga0207664_10022988 3300025929 Bacteria 4665
106 Ga0207644_10004074 3300025931 Bacteria 9480
107 Ga0207644_10075699 3300025931 Bacteria 2474
108 Ga0207689_10022627 3300025942 Bacteria 5281
109 Ga0207667_10076642 3300025949 Bacteria 3469
110 Ga0207712_10005624 3300025961 Bacteria 7909
111 Ga0207708_10002202 3300026075 Bacteria 14398
112 Ga0207676_10050549 3300026095 Unclassified 3241
113 Ga0207674_10006100 3300026116 Bacteria 14247
114 Ga0207675_100139050 3300026118 Bacteria 2306
115 Ga0207683_10049742 3300026121 Bacteria 3670
116 Ga0207428_10003926 3300027907 Bacteria 14256
117 Ga0207428_10029447 3300027907 Bacteria 4551
118 Ga0207428_10038121 3300027907 Bacteria 3909
119 Ga0207428_10084096 3300027907 Bacteria 2480
120 Ga0268264_10009253 3300028381 Bacteria 8156
121 Ga0265338_10005172 3300028800 Bacteria 17141
122 Ga0265338_10008672 3300028800 Bacteria 12300
123 Ga0265760_10003482 3300031090 Bacteria 4570
124 Ga0265339_10005994 3300031249 Bacteria 8032
125 Ga0307513_10032030 3300031456 Bacteria 5939
126 Ga0373934_0009634 3300035086 Bacteria 3622
127 Ga0373936_0004316 3300035113 Bacteria 5373
128 Ga0373931_0000422 3300035691 Bacteria 17336
129 Ga0373935_0055865 3300035692 Bacteria 2516
130 Ga0373927_0051666 3300035695 Bacteria 2658
131 Ga0373933_0015154 3300035724 Bacteria 4297
132 Ga0373937_0013589 3300036401 Bacteria 7173
133 Ga0373925_0020959 3300037068 Bacteria 4763
134 Ga0395900_0033882 3300037418 Bacteria 5256
135 Ga0395898_0008996 3300037466 Bacteria 10512
136 Ga0395901_0053673 3300038443 Bacteria 4188
137 Ga0436365_1783089 3300039437 Bacteria 4126
138 Ga0436360_0275557 3300039438 Bacteria 8690
139 Ga0436360_0276523 3300039438 Bacteria 6386
140 Ga0436360_0516380 3300039438 Bacteria 4359
141 Ga0436360_0588461 3300039438 Bacteria 7146
142 Ga0436360_1137996 3300039438 Bacteria 2642
143 Ga0436361_1030343 3300039447 Bacteria 3725
144 Ga0436361_1067531 3300039447 Bacteria 5679
145 Ga0436361_1214328 3300039447 Bacteria 5272
146 Ga0436363_0902580 3300039450 Bacteria 18988
147 Ga0436363_1566595 3300039450 Bacteria 5039
148 Ga0436362_0294648 3300039453 Bacteria 4816
149 Ga0466967_0036012 3300045976 Bacteria 4221
150 Ga0495592_0008369 3300046454 Bacteria 7761
151 Ga0495592_0049852 3300046454 Bacteria 3111
152 Ga0495638_0058538 3300046460 Bacteria 2387
153 Ga0495641_0006351 3300046461 Bacteria 7672
154 Ga0495653_0011991 3300046463 Bacteria 7078
155 Ga0495662_0006624 3300046476 Bacteria 5780
156 Ga0495584_0025567 3300046491 Bacteria 2993
157 Ga0495585_0011652 3300046492 Bacteria 5201
158 Ga0495585_0021952 3300046492 Bacteria 3664
159 Ga0495608_0042651 3300046511 Bacteria 3034
160 Ga0495630_0024786 3300046517 Bacteria 4434
161 Ga0495666_0011466 3300046526 Bacteria 4418
162 Ga0495652_0015866 3300046529 Bacteria 6744
163 Ga0495665_0008733 3300046531 Bacteria 5502
164 Ga0495587_0010156 3300046536 Bacteria 6005
165 Ga0495598_0000998 3300046537 Bacteria 5426
166 Ga0495645_0018947 3300046543 Bacteria 4951
167 Ga0495622_0024536 3300046557 Bacteria 2816
168 Ga0495635_0046747 3300046663 Bacteria 2985
169 Ga0495635_0061924 3300046663 Bacteria 2569
170 Ga0495588_0014954 3300046674 Bacteria 3725
171 Ga0495657_0041140 3300046675 Bacteria 3166
172 Ga0495599_0002015 3300046678 Bacteria 11750
173 Ga0495623_0025018 3300046679 Bacteria 3846
174 Ga0495646_0010379 3300046680 Bacteria 5924
175 Ga0495670_0014621 3300046691 Bacteria 3860
176 Ga0495600_0009924 3300046809 Bacteria 5898
177 Ga0495581_0033249 3300047315 Bacteria 2985
178 Ga0495604_0031268 3300047317 Bacteria 4223
179 Ga0495672_0016537 3300047320 Bacteria 4966
180 Ga0495680_0017101 3300047322 Bacteria 6205
181 Ga0495680_0021594 3300047322 Bacteria 5387
182 Ga0495680_0047777 3300047322 Bacteria 3364
183 Ga0495684_0031034 3300047471 Bacteria 4102
184 Ga0495614_0028460 3300048089 Bacteria 2407
185 Ga0496102_0005986 3300048905 Bacteria 10358
186 Ga0496102_0132082 3300048905 Bacteria 2338
187 Ga0496104_0001667 3300048907 Bacteria 19175
188 Ga0496104_0027426 3300048907 Bacteria 5271
189 Ga0496104_0088934 3300048907 Bacteria 2951
190 Ga0496106_0005539 3300048909 Bacteria 9346
191 Ga0496106_0081827 3300048909 Bacteria 2481
192 Ga0496107_0057796 3300048910 Bacteria 2804
193 Ga0496110_0003220 3300048913 Bacteria 12436
194 Ga0496112_0046439 3300048915 Bacteria 4259
195 Ga0496115_0015727 3300048918 Bacteria 5747
196 nmdc:mga0yw44_3151_c1 3300050492 Bacteria 7239
197 nmdc:mga05p37_203_c1 3300050507 Bacteria 59589
198 nmdc:mga05p37_7489_c1 3300050507 Bacteria 12870
199 nmdc:mga05p37_99274_c1 3300050507 Bacteria 3586
200 nmdc:mga09592_8540_c1 3300050508 Bacteria 8332
201 nmdc:mga06r32_13023_c1 3300050510 Bacteria 7525
202 nmdc:mga06r32_146_c1 3300050510 Bacteria 53243
203 nmdc:mga06r32_44088_c1 3300050510 Bacteria 4246
204 nmdc:mga08y16_141158_c1 3300050511 Bacteria 2504
205 nmdc:mga0n895_2174_c1 3300050512 Bacteria 15166
206 nmdc:mga0n895_30972_c1 3300050512 Bacteria 5117
207 nmdc:mga0n895_32537_c1 3300050512 Bacteria 5006
208 nmdc:mga0n895_36368_c1 3300050512 Bacteria 4754
209 nmdc:mga0n895_57778_c1 3300050512 Bacteria 3825
210 nmdc:mga0n895_70466_c1 3300050512 Bacteria 3465
211 nmdc:mga0rr50_48421_c1 3300050513 Bacteria 3141
212 nmdc:mga0rr50_56305_c1 3300050513 Bacteria 2937
213 nmdc:mga0a205_82670_c1 3300050515 Bacteria 3102
214 Ga0495601_0002120 3300053077 Bacteria 11165
215 Ga0495601_0038479 3300053077 Bacteria 2992
216 Ga0495612_0013707 3300053078 Bacteria 3265
217 Ga0495619_0009189 3300053085 Bacteria 6245
218 Ga0495619_0011782 3300053085 Bacteria 5507
219 Ga0495619_0040227 3300053085 Bacteria 3055
220 2513675332 2513237098 Bacteria 9902361
221 2513894360 2513237141 Bacteria 8496279
222 2876765046 2876761206 Bacteria 10111113
223 2885385096 2885383462 Bacteria 9473874
224 2903774472 2903768456 Bacteria 9749579
225 Ga0075365_10010508
226 JGI25404J52841_10004236
227 JGI25405J52794_10004431
228 Ga0065715_10005577
229 Ga0070670_100060793
230 Ga0068869_100026313
231 Ga0070680_100023710
232 Ga0070680_100025159
233 Ga0070671_100003779
234 Ga0070674_100049567
235 Ga0070673_100002446
236 Ga0070709_10027945
237 Ga0070714_100007974
238 Ga0070714_100027910
239 Ga0070714_100062795
240 Ga0070713_100012009
241 Ga0070713_100016611
242 Ga0070713_100105500
243 Ga0070710_10033276
244 Ga0070701_10010170
245 Ga0070705_100000470
246 Ga0070700_100002024
247 Ga0070681_10040514
248 Ga0068867_100057364
249 Ga0070706_100024261
250 Ga0070698_100017526
251 Ga0070699_100004992
252 Ga0070699_100061629
253 Ga0070697_100024297
254 Ga0070695_100001278
255 Ga0070695_100010034
256 Ga0070665_100022955
257 Ga0070665_100048987
258 Ga0070704_100004712
259 Ga0068859_100004567
260 Ga0068864_100063068
261 Ga0068860_100017050
262 Ga0068862_100006040
263 Ga0081455_10000858
264 Ga0081455_10001435
265 Ga0081455_10026721
266 Ga0081538_10011414
267 Ga0081540_1000066
268 Ga0081540_1000081
269 Ga0081540_1000190
270 Ga0081540_1000818
271 Ga0081540_1027931
272 Ga0070717_10013201
273 Ga0070717_10020282
274 Ga0070717_10097138
275 Ga0070712_100002806
276 Ga0070712_100003860
277 Ga0070712_100010684
278 Ga0070712_100042579
279 Ga0075367_10027536
280 Ga0075427_10002137
281 Ga0075428_100069794
282 Ga0075428_100129763
283 Ga0075430_100010799
284 Ga0075430_100029864
285 Ga0075430_100035063
286 Ga0075431_100000211
287 Ga0075431_100001079
288 Ga0075431_100090789
289 Ga0075433_10041113
290 Ga0075433_10060861
291 Ga0075434_100000986
292 Ga0075434_100010219
293 Ga0075429_100022717
294 Ga0097620_100004567
295 Ga0075435_100064055
296 Ga0111539_10002157
297 Ga0111539_10137031
298 Ga0111539_10137651
299 Ga0114129_10020915
300 Ga0105248_10145761
301 Ga0105237_10094692
302 Ga0105249_10014645
303 Ga0105246_10002296
304 Ga0157370_10027637
305 Ga0157369_10021763
306 Ga0157372_10028978
307 Ga0163163_10092613
308 Ga0157380_10079798
309 Ga0163161_10027212
310 Ga0213871_10000119
311 Ga0207653_10000759
312 Ga0207692_10006939
313 Ga0207692_10014920
314 Ga0207693_10012612
315 Ga0207693_10017919
316 Ga0207693_10020425
317 Ga0207693_10036777
318 Ga0207693_10044564
319 Ga0207693_10054625
320 Ga0207693_10063842
321 Ga0207693_10073946
322 Ga0207663_10000075
323 Ga0207663_10021641
324 Ga0207660_10032077
325 Ga0207646_10079008
326 Ga0207700_10025806
327 Ga0207700_10072468
328 Ga0207664_10016239
329 Ga0207664_10022988
330 Ga0207644_10004074
331 Ga0207644_10075699
332 Ga0207689_10022627
333 Ga0207667_10076642
334 Ga0207712_10005624
335 Ga0207708_10002202
336 Ga0207676_10050549
337 Ga0207674_10006100
338 Ga0207675_100139050
339 Ga0207683_10049742
340 Ga0207428_10003926
341 Ga0207428_10029447
342 Ga0207428_10038121
343 Ga0207428_10084096
344 Ga0268264_10009253
345 Ga0265338_10005172
346 Ga0265338_10008672
347 Ga0265760_10003482
348 Ga0265339_10005994
349 Ga0307513_10032030
350 Ga0373934_0009634
351 Ga0373936_0004316
352 Ga0373931_0000422
353 Ga0373935_0055865
354 Ga0373927_0051666
355 Ga0373933_0015154
356 Ga0373937_0013589
357 Ga0373925_0020959
358 Ga0395900_0033882
359 Ga0395898_0008996
360 Ga0395901_0053673
361 Ga0436365_1783089
362 Ga0436360_0275557
363 Ga0436360_0276523
364 Ga0436360_0516380
365 Ga0436360_0588461
366 Ga0436360_1137996
367 Ga0436361_1030343
368 Ga0436361_1067531
369 Ga0436361_1214328
370 Ga0436363_0902580
371 Ga0436363_1566595
372 Ga0436362_0294648
373 Ga0466967_0036012
374 Ga0495592_0008369
375 Ga0495592_0049852
376 Ga0495638_0058538
377 Ga0495641_0006351
378 Ga0495653_0011991
379 Ga0495662_0006624
380 Ga0495584_0025567
381 Ga0495585_0011652
382 Ga0495585_0021952
383 Ga0495608_0042651
384 Ga0495630_0024786
385 Ga0495666_0011466
386 Ga0495652_0015866
387 Ga0495665_0008733
388 Ga0495587_0010156
389 Ga0495598_0000998
390 Ga0495645_0018947
391 Ga0495622_0024536
392 Ga0495635_0046747
393 Ga0495635_0061924
394 Ga0495588_0014954
395 Ga0495657_0041140
396 Ga0495599_0002015
397 Ga0495623_0025018
398 Ga0495646_0010379
399 Ga0495670_0014621
400 Ga0495600_0009924
401 Ga0495581_0033249
402 Ga0495604_0031268
403 Ga0495672_0016537
404 Ga0495680_0017101
405 Ga0495680_0021594
406 Ga0495680_0047777
407 Ga0495684_0031034
408 Ga0495614_0028460
409 Ga0496102_0005986
410 Ga0496102_0132082
411 Ga0496104_0001667
412 Ga0496104_0027426
413 Ga0496104_0088934
414 Ga0496106_0005539
415 Ga0496106_0081827
416 Ga0496107_0057796
417 Ga0496110_0003220
418 Ga0496112_0046439
419 Ga0496115_0015727
420 nmdc:mga0yw44_3151_c1
421 nmdc:mga05p37_203_c1
422 nmdc:mga05p37_7489_c1
423 nmdc:mga05p37_99274_c1
424 nmdc:mga09592_8540_c1
425 nmdc:mga06r32_13023_c1
426 nmdc:mga06r32_146_c1
427 nmdc:mga06r32_44088_c1
428 nmdc:mga08y16_141158_c1
429 nmdc:mga0n895_2174_c1
430 nmdc:mga0n895_30972_c1
431 nmdc:mga0n895_32537_c1
432 nmdc:mga0n895_36368_c1
433 nmdc:mga0n895_57778_c1
434 nmdc:mga0n895_70466_c1
435 nmdc:mga0rr50_48421_c1
436 nmdc:mga0rr50_56305_c1
437 nmdc:mga0a205_82670_c1
438 Ga0495601_0002120
439 Ga0495601_0038479
440 Ga0495612_0013707
441 Ga0495619_0009189
442 Ga0495619_0011782
443 Ga0495619_0040227
444 2513675332
445 2513894360
446 2876765046
447 2885385096
448 2903774472

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14742

GDE_N_bis

N-terminal domain of (some) glycogen debranching enzymes

121

312

0.96

PF06202

GDE_C

Amylo-alpha-1,6-glucosidase

447

746

0.8

PF22422

MGH1-like_GH

Mannosylglycerate hydrolase MGH1-like glycoside hydrolase domain

465

719

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2e2a-assembly1.cif.gz_B asp81leu enzyme iia from the lactose specific pts from lactococcus lactis 0.9136 445 488
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.8967 11 699
7vma-assembly1.cif.gz_A the x-ray crystallographic structure of amylo-alpha-1,6-glucosidase from thermococcus gammatolerans stb12 0.8939 11 699
7qsj-assembly2.cif.gz_B methylmannose polysaccharide hydrolase mmph from m. hassiacum 0.7494 249 645
4wva-assembly2.cif.gz_B crystal structure of gh63 mannosylglycerate hydrolase from thermus thermophilus hb8 in complex with tris 0.7365 254 643
ID Description Score Start End Superfamily
af_A0A0G2KV16_1_128_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9844 448 487 1.25.40.10
af_Q54Y15_171_389_1.10.3450.30 Mainly Alpha;Orthogonal Bundle;Hyaluronidase domain-like; 0.9085 445 487 1.10.3450.30
af_F1QIP8_399_478_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8529 449 488 1.25.40.10
af_Q9Z2G1_350_438_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8063 446 484 1.25.40.10
af_Q8C0T1_350_439_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8006 446 484 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A1Q3JW30-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9734 1 712 GO:0005975
AF-A0A158L6X6-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9718 511 720 GO:0005975
AF-A0A7V8NPD6-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9706 331 702 GO:0005975
AF-A0A7V8NPD6-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9681 331 702 GO:0005975
AF-A0A1M3Q1W5-F1-model_v4 Amylo-alpha-1,6-glucosidase 0.9679 1 711 GO:0005975

Map