F336523

General Info

Members Datasets Scaffolds Average Seq Length
224 173 200 303

Family's Representative Sequence

Representative Sequence 3300005983|Ga0081540_1000459|Ga0081540_100045912
Length 317
Sequence MATLASVSERPSGSVSQVGGALAPPAAPRRRSALAARIAGSAQRLWWTLVSIGTFTAIWELCWLTGLADPKLLPPPHIFLGNIAEQAKFFNTATRWSIGVNPADGPSPYEAVMITIGATTMRVMVGLVIASVLAISLGVLIRYFLFFERLTLPAITLLSPVSPIAWLPVAIFLFGIGNAPAIFMVVIALFFHMVLATISQIDGVNRNLINVARTMGATKWQTYSRVIIPAILPGLLVVLRMNLFAAWMVVLVAESTGVGYGLGQVIMMARNTFNPSLVFFTIALIGLLGFTFDLILRLLQKRILYWVPETTGVLRGL

Samples

Sample ID Description Type Environment
1 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
2 2643221660 Methylibium sp. Root1272 Isolate Unclassified
3 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
4 2738543013 Variovorax sp. BT01 Isolate Unclassified
5 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
6 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
7 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
8 2874590934 Bradyrhizobium canariense UBMA181 Isolate Nodule
9 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
10 2876771140 Bradyrhizobium canariense UBMA192 Isolate Nodule
11 2876818435 Bradyrhizobium canariense UBMA195 Isolate Nodule
12 2879074833 Bradyrhizobium canariense UBMA171 Isolate Nodule
13 2879127579 Bradyrhizobium canariense UBMA052 Isolate Nodule
14 2879142872 Bradyrhizobium canariense UBMA061 Isolate Nodule
15 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
16 2902330777 Methylobacterium sp. 2A Isolate Unclassified
17 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
18 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
19 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
20 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
21 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
22 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
23 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
24 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
25 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
26 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
27 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
28 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
29 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
33 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
34 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
35 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
36 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
39 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
40 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
50 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
51 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
52 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
68 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
88 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
96 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
97 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
98 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
99 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
100 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
107 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
108 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
121 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
122 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
123 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
127 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
128 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
129 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
130 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
131 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
135 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
136 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
141 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
142 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
153 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
154 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
155 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
156 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
159 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
160 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
165 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
166 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
167 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
168 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
169 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
171 641522639 Methylobacterium sp. 4-46 Isolate Nodule
172 8016630954 Bradyrhizobium sp. F1.13.1 Isolate Nodule
173 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.29
Metatranscriptomes 0
Isolates 10.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.73
Nodule 5.8
Rhizoplane 1.34
Rhizosphere 60.27
Stem 0
Stem Tuber 0
Unclassified 17.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10135887 3300003322 Bacteria 1796
2 Ga0055536_1000473 3300003781 Bacteria 28047
3 Ga0055530_10001493 3300003791 Bacteria 16977
4 Ga0055540_1000054 3300003792 Bacteria 142505
5 Ga0055531_10000037 3300003794 Bacteria 144244
6 Ga0068869_100039984 3300005334 Bacteria 3351
7 Ga0070689_100313793 3300005340 Bacteria 1308
8 Ga0070691_10037202 3300005341 Bacteria 2296
9 Ga0070669_100283270 3300005353 Bacteria 1329
10 Ga0070673_100275991 3300005364 Bacteria 1473
11 Ga0070714_100004436 3300005435 Bacteria 10565
12 Ga0070713_100470716 3300005436 Bacteria 1182
13 Ga0070710_10000289 3300005437 Bacteria 23813
14 Ga0070711_100000278 3300005439 Bacteria 26517
15 Ga0070711_100515654 3300005439 Bacteria 987
16 Ga0070700_100023574 3300005441 Bacteria 3601
17 Ga0070707_100701623 3300005468 Bacteria 975
18 Ga0070698_100006597 3300005471 Bacteria 12585
19 Ga0070697_100017552 3300005536 Bacteria 5633
20 Ga0070695_100007133 3300005545 Bacteria 6624
21 Ga0070665_100023279 3300005548 Bacteria 6238
22 Ga0070665_100165042 3300005548 Bacteria 2217
23 Ga0068860_100148481 3300005843 Bacteria 2257
24 Ga0068862_100292834 3300005844 Bacteria 1495
25 Ga0081455_10002140 3300005937 Bacteria 23551
26 Ga0081455_10104289 3300005937 Bacteria 2269
27 Ga0081540_1000459 3300005983 Bacteria 40435
28 Ga0081540_1024542 3300005983 Bacteria 3497
29 Ga0081539_10002138 3300005985 Bacteria 29182
30 Ga0081539_10005065 3300005985 Bacteria 13817
31 Ga0075368_10089184 3300006042 Bacteria 1260
32 Ga0070716_100000980 3300006173 Bacteria 12436
33 Ga0070716_100014314 3300006173 Bacteria 4062
34 Ga0070716_100170187 3300006173 Bacteria 1421
35 Ga0070712_100038427 3300006175 Bacteria 3270
36 Ga0075362_10013229 3300006177 Bacteria 3299
37 Ga0075362_10033320 3300006177 Bacteria 2240
38 Ga0075362_10046832 3300006177 Bacteria 1924
39 Ga0075369_10099922 3300006186 Bacteria 1301
40 Ga0075370_10106401 3300006353 Bacteria 1626
41 Ga0075433_10002393 3300006852 Bacteria 14271
42 Ga0075434_100005586 3300006871 Bacteria 11460
43 Ga0075434_100019473 3300006871 Bacteria 6570
44 Ga0075436_100129234 3300006914 Bacteria 1771
45 Ga0099826_10020771 3300006948 Bacteria 4922
46 Ga0075435_100007541 3300007076 Bacteria 7767
47 Ga0075435_100012150 3300007076 Bacteria 6367
48 Ga0075435_100067609 3300007076 Bacteria 2910
49 Ga0099794_10017233 3300007265 Bacteria 3216
50 Ga0099795_10026209 3300007788 Bacteria 1962
51 Ga0099795_10029219 3300007788 Bacteria 1882
52 Ga0111539_10047637 3300009094 Bacteria 5122
53 Ga0111539_10783124 3300009094 Bacteria 1110
54 Ga0114129_10081931 3300009147 Bacteria 4485
55 Ga0105243_10000384 3300009148 Bacteria 47263
56 Ga0105242_10469947 3300009176 Bacteria 1189
57 Ga0099796_10002039 3300010159 Bacteria 4307
58 Ga0157379_10296552 3300014968 Bacteria 1473
59 Ga0157379_10523549 3300014968 Bacteria 1101
60 Ga0157376_10014788 3300014969 Bacteria 5873
61 Ga0213875_10000120 3300021388 Bacteria 88115
62 Ga0213875_10005885 3300021388 Bacteria 6516
63 Ga0213871_10007269 3300021441 Bacteria 2386
64 Ga0209050_1001283 3300025298 Bacteria 28639
65 Ga0207692_10001077 3300025898 Bacteria 10002
66 Ga0207685_10004386 3300025905 Bacteria 3580
67 Ga0207699_10018262 3300025906 Bacteria 3713
68 Ga0207699_10223270 3300025906 Bacteria 1287
69 Ga0207693_10018898 3300025915 Bacteria 5486
70 Ga0207693_10032400 3300025915 Bacteria 4125
71 Ga0207693_10325544 3300025915 Bacteria 1203
72 Ga0207663_10113035 3300025916 Bacteria 1846
73 Ga0207663_10404293 3300025916 Bacteria 1045
74 Ga0207659_10101174 3300025926 Bacteria 2173
75 Ga0207709_10000338 3300025935 Bacteria 48742
76 Ga0207670_10285596 3300025936 Bacteria 1287
77 Ga0207665_10013521 3300025939 Bacteria 5366
78 Ga0207665_10374405 3300025939 Bacteria 1079
79 Ga0207711_10134444 3300025941 Bacteria 2220
80 Ga0207689_10350084 3300025942 Bacteria 1228
81 Ga0207712_10138827 3300025961 Bacteria 1862
82 Ga0207677_10158464 3300026023 Bacteria 1755
83 Ga0207708_10064510 3300026075 Bacteria 2798
84 Ga0207675_100229950 3300026118 Bacteria 1789
85 Ga0207683_10190898 3300026121 Bacteria 1860
86 Ga0209179_1017134 3300027512 Bacteria 1369
87 Ga0209282_1116803 3300027666 Bacteria 1342
88 Ga0209588_1014261 3300027671 Bacteria 2431
89 Ga0209588_1016704 3300027671 Bacteria 2269
90 Ga0207428_10032412 3300027907 Bacteria 4298
91 Ga0268266_10017186 3300028379 Bacteria 6177
92 Ga0268266_10448819 3300028379 Bacteria 1226
93 Ga0265334_10025766 3300028573 Bacteria 2378
94 Ga0265340_10038709 3300031247 Bacteria 2357
95 Ga0316576_10006120 3300031727 Bacteria 7451
96 Ga0307406_10290365 3300031901 Bacteria 1252
97 Ga0373932_0011721 3300035112 Bacteria 2147
98 Ga0373936_0060025 3300035113 Bacteria 1551
99 Ga0373960_0005632 3300035121 Bacteria 2912
100 Ga0373960_0006841 3300035121 Bacteria 2686
101 Ga0373942_0018907 3300035207 Bacteria 1714
102 Ga0373942_0020134 3300035207 Bacteria 1672
103 Ga0373961_0037127 3300035241 Bacteria 1390
104 Ga0373962_0002015 3300035242 Bacteria 4841
105 Ga0373931_0001703 3300035691 Bacteria 9526
106 Ga0373931_0007005 3300035691 Bacteria 5305
107 Ga0373931_0028370 3300035691 Bacteria 2866
108 Ga0373931_0216731 3300035691 Bacteria 1151
109 Ga0373935_0108877 3300035692 Bacteria 1837
110 Ga0373927_0219408 3300035695 Bacteria 1249
111 Ga0373937_0031205 3300036401 Bacteria 4827
112 Ga0436364_0369195 3300037853 Bacteria 68092
113 Ga0436364_0374996 3300037853 Bacteria 6606
114 Ga0400483_028904 3300039062 Bacteria 2880
115 Ga0400483_065043 3300039062 Bacteria 5190
116 Ga0400483_133055 3300039062 Bacteria 1472
117 Ga0400483_160013 3300039062 Bacteria 1925
118 Ga0400483_168823 3300039062 Bacteria 3865
119 Ga0400483_207334 3300039062 Bacteria 5563
120 Ga0400483_242655 3300039062 Bacteria 2125
121 Ga0400483_266260 3300039062 Bacteria 4910
122 Ga0436365_0260479 3300039437 Bacteria 1898
123 Ga0436365_1583819 3300039437 Bacteria 5916
124 Ga0436360_0360758 3300039438 Bacteria 2959
125 Ga0436360_0887316 3300039438 Bacteria 916
126 Ga0436361_1212535 3300039447 Bacteria 4107
127 Ga0439441_035572 3300042001 Bacteria 982
128 Ga0466968_0022755 3300044735 Bacteria 2549
129 Ga0466970_0062022 3300044765 Bacteria 2004
130 Ga0466960_0039952 3300044901 Bacteria 2216
131 Ga0466967_0029231 3300045976 Bacteria 4610
132 Ga0495638_0006772 3300046460 Bacteria 8292
133 Ga0495651_0090091 3300046462 Bacteria 2301
134 Ga0495664_0113560 3300046477 Bacteria 1636
135 Ga0495606_0003395 3300046507 Bacteria 16930
136 Ga0495648_0027019 3300046524 Bacteria 3851
137 Ga0495654_0035114 3300046530 Bacteria 2526
138 Ga0495645_0128912 3300046543 Bacteria 1775
139 Ga0495667_0025600 3300046559 Bacteria 3975
140 Ga0495668_0085594 3300046616 Bacteria 1729
141 Ga0495625_0000012 3300046660 Bacteria 363006
142 Ga0495600_0071526 3300046809 Bacteria 2266
143 Ga0495672_0001073 3300047320 Bacteria 27847
144 Ga0495680_0048688 3300047322 Bacteria 3327
145 Ga0495683_0076859 3300047323 Bacteria 1633
146 Ga0495685_007703 3300047447 Bacteria 3561
147 Ga0495673_0024643 3300047469 Bacteria 2902
148 Ga0495626_0079865 3300048091 Bacteria 1455
149 Ga0496102_0001535 3300048905 Bacteria 20378
150 Ga0496102_0003569 3300048905 Bacteria 13183
151 Ga0496115_0124280 3300048918 Bacteria 2125
152 Ga0496118_0217778 3300048921 Bacteria 1114
153 Ga0496119_0002293 3300048922 Bacteria 21167
154 Ga0496119_0016809 3300048922 Bacteria 5540
155 Ga0496120_0079199 3300048923 Bacteria 1784
156 Ga0496121_0002724 3300048924 Bacteria 26359
157 Ga0496121_0037397 3300048924 Bacteria 4312
158 Ga0496122_0001233 3300048925 Bacteria 43226
159 Ga0496123_0003193 3300048926 Bacteria 18704
160 Ga0496125_0012331 3300048928 Bacteria 8492
161 Ga0496125_0127510 3300048928 Bacteria 1800
162 Ga0496126_0116504 3300048929 Bacteria 2322
163 Ga0496126_0153517 3300048929 Bacteria 1972
164 Ga0496126_0240907 3300048929 Bacteria 1511
165 Ga0495682_0025678 3300049460 Bacteria 2192
166 Ga0501033_0000476 3300049570 Bacteria 37977
167 Ga0501034_0138285 3300049571 Bacteria 2416
168 Ga0501034_0532080 3300049571 Bacteria 1086
169 nmdc:mga0yw44_5255_c1 3300050492 Bacteria 6075
170 nmdc:mga06z11_13111_c1 3300050494 Bacteria 3629
171 nmdc:mga05p37_142810_c1 3300050507 Bacteria 2932
172 nmdc:mga0qj67_116473_c1 3300050509 Bacteria 2159
173 nmdc:mga08y16_119139_c1 3300050511 Bacteria 2748
174 nmdc:mga08y16_195695_c1 3300050511 Bacteria 2095
175 nmdc:mga0n895_46719_c1 3300050512 Bacteria 4231
176 nmdc:mga0n895_7384_c1 3300050512 Bacteria 9426
177 nmdc:mga0rr50_27530_c1 3300050513 Bacteria 3982
178 nmdc:mga0rr50_9186_c1 3300050513 Bacteria 6200
179 nmdc:mga0a205_969_c1 3300050515 Bacteria 23713
180 nmdc:mga0sz30_554_c1 3300050516 Bacteria 13963
181 Ga0500646_0108613 3300053090 Bacteria 880
182 Ga0500566_0000155 3300053094 Bacteria 34706
183 Ga0500641_0005594 3300053096 Bacteria 4450
184 Ga0500556_0000023 3300053104 Bacteria 168755
185 Ga0500556_0026562 3300053104 Bacteria 1924
186 Ga0500562_006984 3300053108 Bacteria 2847
187 Ga0500572_000954 3300053111 Bacteria 8768
188 Ga0500593_000069 3300053117 Bacteria 38110
189 Ga0500559_0001548 3300053136 Bacteria 12873
190 Ga0500568_0025852 3300053139 Bacteria 2470
191 Ga0500616_0012728 3300053153 Bacteria 4915
192 Ga0500616_0022279 3300053153 Bacteria 3539
193 Ga0500639_025560 3300053163 Bacteria 3122
194 Ga0500639_111270 3300053163 Bacteria 1332
195 Ga0500636_0084609 3300053177 Bacteria 1823
196 Ga0500637_0009215 3300053178 Bacteria 5014
197 Ga0500645_047674 3300053730 Bacteria 1255
198 Ga0500552_006273 3300053733 Bacteria 1329
199 Ga0500599_009246 3300053736 Bacteria 1288
200 Ga0501082_0134591 3300060353 Bacteria 2145

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005468 Ga0070707_100701623 Ga0070707_1007016231 240
2 3300048928 Ga0496125_0127510 Ga0496125_0127510_1010_1783 250
3 3300009176 Ga0105242_10469947 Ga0105242_104699472 258
4 3300053096 Ga0500641_0005594 Ga0500641_0005594_1384_2346 261
5 3300053090 Ga0500646_0108613 Ga0500646_0108613_11_865 262
6 3300053117 Ga0500593_000069 Ga0500593_000069_3183_3995 262
7 3300049570 Ga0501033_0000476 Ga0501033_0000476_19775_20671 264
8 3300005548 Ga0070665_100165042 Ga0070665_1001650422 265
9 3300025941 Ga0207711_10134444 Ga0207711_101344443 265
10 3300035207 Ga0373942_0018907 Ga0373942_0018907_825_1664 269
11 3300035242 Ga0373962_0002015 Ga0373962_0002015_3954_4793 269
12 3300039438 Ga0436360_0887316 Ga0436360_0887316_62_895 269
13 3300014969 Ga0157376_10014788 Ga0157376_100147883 270
14 3300005843 Ga0068860_100148481 Ga0068860_1001484812 271
15 3300046543 Ga0495645_0128912 Ga0495645_0128912_64_921 272
16 3300053108 Ga0500562_006984 Ga0500562_006984_29_886 272
17 3300053733 Ga0500552_006273 Ga0500552_006273_461_1309 272
18 3300042001 Ga0439441_035572 Ga0439441_035572_41_970 273
19 3300048922 Ga0496119_0016809 Ga0496119_0016809_4567_5493 274
20 3300048923 Ga0496120_0079199 Ga0496120_0079199_368_1294 274
21 3300005548 Ga0070665_100023279 Ga0070665_1000232795 275
22 3300005985 Ga0081539_10002138 Ga0081539_1000213814 275
23 3300028379 Ga0268266_10017186 Ga0268266_100171865 275
24 3300048905 Ga0496102_0003569 Ga0496102_0003569_10208_11113 275
25 3300026118 Ga0207675_100229950 Ga0207675_1002299502 276
26 3300005471 Ga0070698_100006597 Ga0070698_1000065975 277
27 3300028573 Ga0265334_10025766 Ga0265334_100257662 277
28 3300031247 Ga0265340_10038709 Ga0265340_100387092 277
29 3300035113 Ga0373936_0060025 Ga0373936_0060025_147_1079 277
30 3300048928 Ga0496125_0012331 Ga0496125_0012331_4814_5704 277
31 3300005937 Ga0081455_10104289 Ga0081455_101042891 278
32 3300007788 Ga0099795_10029219 Ga0099795_100292192 278
33 3300010159 Ga0099796_10002039 Ga0099796_100020393 278
34 3300027671 Ga0209588_1014261 Ga0209588_10142612 278
35 3300035692 Ga0373935_0108877 Ga0373935_0108877_194_1126 278
36 3300036401 Ga0373937_0031205 Ga0373937_0031205_560_1492 278
37 3300005436 Ga0070713_100470716 Ga0070713_1004707162 279
38 3300005983 Ga0081540_1024542 Ga0081540_10245423 279
39 3300035121 Ga0373960_0006841 Ga0373960_0006841_1229_2161 279
40 3300053111 Ga0500572_000954 Ga0500572_000954_4678_5580 279
41 3300053136 Ga0500559_0001548 Ga0500559_0001548_6537_7439 279
42 3300053163 Ga0500639_111270 Ga0500639_111270_241_1143 279
43 3300006186 Ga0075369_10099922 Ga0075369_100999222 280
44 3300006852 Ga0075433_10002393 Ga0075433_100023939 280
45 3300006871 Ga0075434_100005586 Ga0075434_10000558611 280
46 3300007076 Ga0075435_100007541 Ga0075435_1000075415 280
47 3300009094 Ga0111539_10047637 Ga0111539_100476372 280
48 3300027907 Ga0207428_10032412 Ga0207428_100324123 280
49 3300031901 Ga0307406_10290365 Ga0307406_102903652 280
50 3300050511 nmdc:mga08y16_119139_c1 nmdc:mga08y16_119139_c1_1164_2114 280
51 3300050512 nmdc:mga0n895_46719_c1 nmdc:mga0n895_46719_c1_472_1422 280
52 3300050515 nmdc:mga0a205_969_c1 nmdc:mga0a205_969_c1_15349_16299 280
53 3300060353 Ga0501082_0134591 Ga0501082_0134591_1243_2109 280
54 iso_pu_bacteria 8016630954 8016636344 281
55 3300048924 Ga0496121_0002724 Ga0496121_0002724_18258_19163 282
56 3300005334 Ga0068869_100039984 Ga0068869_1000399843 283
57 3300025942 Ga0207689_10350084 Ga0207689_103500841 283
58 3300050511 nmdc:mga08y16_195695_c1 nmdc:mga08y16_195695_c1_1173_2066 283
59 3300007265 Ga0099794_10017233 Ga0099794_100172333 284
60 3300026023 Ga0207677_10158464 Ga0207677_101584642 284
61 3300027512 Ga0209179_1017134 Ga0209179_10171342 284
62 3300027671 Ga0209588_1016704 Ga0209588_10167043 284
63 3300046524 Ga0495648_0027019 Ga0495648_0027019_981_1877 284
64 3300046616 Ga0495668_0085594 Ga0495668_0085594_668_1564 284
65 3300048091 Ga0495626_0079865 Ga0495626_0079865_535_1431 284
66 iso_pu_bacteria 2919679072 2919683129 284
67 3300005364 Ga0070673_100275991 Ga0070673_1002759912 285
68 3300007076 Ga0075435_100067609 Ga0075435_1000676093 285
69 3300035112 Ga0373932_0011721 Ga0373932_0011721_1032_1982 285
70 3300035241 Ga0373961_0037127 Ga0373961_0037127_12_962 285
71 3300035691 Ga0373931_0007005 Ga0373931_0007005_254_1204 285
72 iso_pu_bacteria 8045864390 8045864860 285
73 3300005435 Ga0070714_100004436 Ga0070714_10000443610 286
74 3300005437 Ga0070710_10000289 Ga0070710_100002895 286
75 3300005439 Ga0070711_100000278 Ga0070711_10000027825 286
76 3300006173 Ga0070716_100000980 Ga0070716_1000009804 286
77 3300006173 Ga0070716_100014314 Ga0070716_1000143143 286
78 3300025898 Ga0207692_10001077 Ga0207692_100010775 286
79 3300025905 Ga0207685_10004386 Ga0207685_100043862 286
80 3300025906 Ga0207699_10018262 Ga0207699_100182623 286
81 3300025915 Ga0207693_10032400 Ga0207693_100324003 286
82 3300025916 Ga0207663_10404293 Ga0207663_104042931 286
83 3300025939 Ga0207665_10013521 Ga0207665_100135213 286
84 3300046462 Ga0495651_0090091 Ga0495651_0090091_862_1800 286
85 3300046477 Ga0495664_0113560 Ga0495664_0113560_123_1061 286
86 3300046559 Ga0495667_0025600 Ga0495667_0025600_1771_2709 286
87 3300046809 Ga0495600_0071526 Ga0495600_0071526_985_1923 286
88 3300047320 Ga0495672_0001073 Ga0495672_0001073_20808_21716 286
89 3300047322 Ga0495680_0048688 Ga0495680_0048688_1438_2376 286
90 3300047469 Ga0495673_0024643 Ga0495673_0024643_514_1422 286
91 3300048918 Ga0496115_0124280 Ga0496115_0124280_1054_1989 286
92 3300053177 Ga0500636_0084609 Ga0500636_0084609_183_1043 286
93 iso_pu_bacteria 2595698237 2596376852 286
94 iso_pu_bacteria 2874590934 2874594119 286
95 iso_pu_bacteria 2874645413 2874648787 286
96 iso_pu_bacteria 2876771140 2876773653 286
97 iso_pu_bacteria 2876818435 2876824719 286
98 iso_pu_bacteria 2879074833 2879081446 286
99 iso_pu_bacteria 2879127579 2879133185 286
100 iso_pu_bacteria 2879142872 2879149467 286
101 iso_pu_bacteria 2902330777 2902334306 286
102 iso_pu_bacteria 2928125067 2928125237 286
103 3300039062 Ga0400483_028904 Ga0400483_028904_443_1342 287
104 3300039062 Ga0400483_065043 Ga0400483_065043_4218_5126 287
105 3300039062 Ga0400483_160013 Ga0400483_160013_17_925 287
106 3300039062 Ga0400483_207334 Ga0400483_207334_4361_5260 287
107 3300039062 Ga0400483_242655 Ga0400483_242655_1083_1982 287
108 3300049571 Ga0501034_0532080 Ga0501034_0532080_70_996 287
109 3300050509 nmdc:mga0qj67_116473_c1 nmdc:mga0qj67_116473_c1_1089_1994 287
110 iso_pu_bacteria 2643221660 2644338140 287
111 iso_pu_bacteria 2889306138 2889307475 287
112 iso_pu_bacteria 2902405164 2902405882 287
113 3300005844 Ga0068862_100292834 Ga0068862_1002928342 288
114 3300006042 Ga0075368_10089184 Ga0075368_100891841 288
115 3300006177 Ga0075362_10033320 Ga0075362_100333202 288
116 3300006353 Ga0075370_10106401 Ga0075370_101064012 288
117 3300007788 Ga0099795_10026209 Ga0099795_100262092 288
118 3300009094 Ga0111539_10783124 Ga0111539_107831242 288
119 3300021388 Ga0213875_10005885 Ga0213875_100058855 288
120 3300025926 Ga0207659_10101174 Ga0207659_101011741 288
121 3300037853 Ga0436364_0374996 Ga0436364_0374996_4330_5265 288
122 3300048929 Ga0496126_0240907 Ga0496126_0240907_556_1488 288
123 3300050513 nmdc:mga0rr50_27530_c1 nmdc:mga0rr50_27530_c1_2582_3523 288
124 3300053178 Ga0500637_0009215 Ga0500637_0009215_449_1390 288
125 3300005340 Ga0070689_100313793 Ga0070689_1003137932 289
126 3300005353 Ga0070669_100283270 Ga0070669_1002832702 289
127 3300005536 Ga0070697_100017552 Ga0070697_1000175526 289
128 3300005937 Ga0081455_10002140 Ga0081455_1000214010 289
129 3300005985 Ga0081539_10005065 Ga0081539_100050658 289
130 3300006173 Ga0070716_100170187 Ga0070716_1001701872 289
131 3300006175 Ga0070712_100038427 Ga0070712_1000384272 289
132 3300014968 Ga0157379_10296552 Ga0157379_102965522 289
133 3300021441 Ga0213871_10007269 Ga0213871_100072693 289
134 3300025906 Ga0207699_10223270 Ga0207699_102232702 289
135 3300025915 Ga0207693_10018898 Ga0207693_100188983 289
136 3300025915 Ga0207693_10325544 Ga0207693_103255442 289
137 3300025916 Ga0207663_10113035 Ga0207663_101130352 289
138 3300025936 Ga0207670_10285596 Ga0207670_102855962 289
139 3300025939 Ga0207665_10374405 Ga0207665_103744052 289
140 3300025961 Ga0207712_10138827 Ga0207712_101388272 289
141 3300026121 Ga0207683_10190898 Ga0207683_101908982 289
142 3300035691 Ga0373931_0028370 Ga0373931_0028370_1241_2179 289
143 3300035691 Ga0373931_0216731 Ga0373931_0216731_111_1043 289
144 3300035695 Ga0373927_0219408 Ga0373927_0219408_281_1213 289
145 3300039062 Ga0400483_133055 Ga0400483_133055_378_1292 289
146 3300039062 Ga0400483_168823 Ga0400483_168823_2911_3825 289
147 3300039062 Ga0400483_266260 Ga0400483_266260_838_1752 289
148 3300039437 Ga0436365_1583819 Ga0436365_1583819_2001_2942 289
149 3300039438 Ga0436360_0360758 Ga0436360_0360758_1558_2490 289
150 3300039447 Ga0436361_1212535 Ga0436361_1212535_1295_2227 289
151 3300044765 Ga0466970_0062022 Ga0466970_0062022_128_1054 289
152 3300045976 Ga0466967_0029231 Ga0466967_0029231_370_1308 289
153 3300047447 Ga0495685_007703 Ga0495685_007703_1646_2578 289
154 3300048929 Ga0496126_0116504 Ga0496126_0116504_882_1814 289
155 3300049571 Ga0501034_0138285 Ga0501034_0138285_554_1489 289
156 3300050492 nmdc:mga0yw44_5255_c1 nmdc:mga0yw44_5255_c1_1766_2698 289
157 3300053153 Ga0500616_0022279 Ga0500616_0022279_181_1113 289
158 iso_pu_bacteria 3003665799 3003669679 289
159 3300005341 Ga0070691_10037202 Ga0070691_100372023 290
160 3300005439 Ga0070711_100515654 Ga0070711_1005156541 290
161 3300005441 Ga0070700_100023574 Ga0070700_1000235743 290
162 3300005545 Ga0070695_100007133 Ga0070695_1000071333 290
163 3300006177 Ga0075362_10013229 Ga0075362_100132292 290
164 3300014968 Ga0157379_10523549 Ga0157379_105235491 290
165 3300026075 Ga0207708_10064510 Ga0207708_100645102 290
166 3300028379 Ga0268266_10448819 Ga0268266_104488191 290
167 3300044735 Ga0466968_0022755 Ga0466968_0022755_101_1030 290
168 3300046460 Ga0495638_0006772 Ga0495638_0006772_79_1026 290
169 3300046507 Ga0495606_0003395 Ga0495606_0003395_7048_7995 290
170 3300047323 Ga0495683_0076859 Ga0495683_0076859_572_1519 290
171 3300048905 Ga0496102_0001535 Ga0496102_0001535_10160_11068 290
172 3300049460 Ga0495682_0025678 Ga0495682_0025678_975_1922 290
173 3300050494 nmdc:mga06z11_13111_c1 nmdc:mga06z11_13111_c1_2568_3515 290
174 3300050516 nmdc:mga0sz30_554_c1 nmdc:mga0sz30_554_c1_5326_6273 290
175 3300053094 Ga0500566_0000155 Ga0500566_0000155_377_1324 290
176 3300053104 Ga0500556_0026562 Ga0500556_0026562_27_974 290
177 3300053153 Ga0500616_0012728 Ga0500616_0012728_2655_3602 290
178 3300053163 Ga0500639_025560 Ga0500639_025560_1713_2660 290
179 3300053736 Ga0500599_009246 Ga0500599_009246_215_1162 290
180 iso_pu_bacteria 2935959822 2935965545 290
181 iso_pu_bacteria 641522639 641643671 290
182 3300005983 Ga0081540_1000459 Ga0081540_100045912 291
183 3300009147 Ga0114129_10081931 Ga0114129_100819313 291
184 3300021388 Ga0213875_10000120 Ga0213875_1000012048 291
185 3300031727 Ga0316576_10006120 Ga0316576_100061203 291
186 3300035121 Ga0373960_0005632 Ga0373960_0005632_1319_2272 291
187 3300035207 Ga0373942_0020134 Ga0373942_0020134_337_1290 291
188 3300035691 Ga0373931_0001703 Ga0373931_0001703_2062_3015 291
189 3300037853 Ga0436364_0369195 Ga0436364_0369195_62613_63560 291
190 3300039437 Ga0436365_0260479 Ga0436365_0260479_937_1884 291
191 3300044901 Ga0466960_0039952 Ga0466960_0039952_1275_2180 291
192 3300050507 nmdc:mga05p37_142810_c1 nmdc:mga05p37_142810_c1_1381_2334 291
193 3300053139 Ga0500568_0025852 Ga0500568_0025852_144_1073 292
194 iso_pu_bacteria 2842333319 2842339397 292
195 3300006871 Ga0075434_100019473 Ga0075434_1000194732 293
196 3300006914 Ga0075436_100129234 Ga0075436_1001292342 293
197 3300007076 Ga0075435_100012150 Ga0075435_1000121504 293
198 3300050512 nmdc:mga0n895_7384_c1 nmdc:mga0n895_7384_c1_3950_4885 293
199 3300050513 nmdc:mga0rr50_9186_c1 nmdc:mga0rr50_9186_c1_2346_3281 293
200 3300003781 Ga0055536_1000473 Ga0055536_10004738 294
201 3300003791 Ga0055530_10001493 Ga0055530_100014933 294
202 3300003792 Ga0055540_1000054 Ga0055540_100005497 294
203 3300003794 Ga0055531_10000037 Ga0055531_1000003743 294
204 3300006177 Ga0075362_10046832 Ga0075362_100468322 294
205 3300025298 Ga0209050_1001283 Ga0209050_10012832 294
206 3300046660 Ga0495625_0000012 Ga0495625_0000012_59421_60350 294
207 iso_pu_bacteria 2738541281 2738745620 295
208 iso_pu_bacteria 2738543013 2739248223 295
209 iso_pu_bacteria 2738543032 2739354850 295
210 3300009148 Ga0105243_10000384 Ga0105243_1000038420 296
211 3300025935 Ga0207709_10000338 Ga0207709_1000033833 296
212 3300048922 Ga0496119_0002293 Ga0496119_0002293_1691_2599 296
213 3300048925 Ga0496122_0001233 Ga0496122_0001233_8080_8988 296
214 3300048926 Ga0496123_0003193 Ga0496123_0003193_14857_15765 296
215 3300053104 Ga0500556_0000023 Ga0500556_0000023_25979_26887 296
216 3300053730 Ga0500645_047674 Ga0500645_047674_140_1048 296
217 iso_pu_bacteria 2842718218 2842718645 296
218 3300006948 Ga0099826_10020771 Ga0099826_100207714 297
219 3300027666 Ga0209282_1116803 Ga0209282_11168032 297
220 3300046530 Ga0495654_0035114 Ga0495654_0035114_492_1418 299
221 3300003322 rootL2_10135887 rootL2_101358872 300
222 3300048921 Ga0496118_0217778 Ga0496118_0217778_179_1081 300
223 3300048924 Ga0496121_0037397 Ga0496121_0037397_704_1606 300
224 3300048929 Ga0496126_0153517 Ga0496126_0153517_990_1892 300

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

108

305

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.8469 98 289
7ahc-assembly1.cif.gz_B opua apo inward-facing 0.8428 94 286
3tui-assembly2.cif.gz_E inward facing conformations of the metni methionine abc transporter: cy5 native crystal form 0.8294 98 289
3dhw-assembly1.cif.gz_B crystal structure of methionine importer metni 0.794 98 281
3tuz-assembly2.cif.gz_F inward facing conformations of the metni methionine abc transporter: cy5 semet soak crystal form 0.7589 98 289
ID Description Score Start End Superfamily
af_Q2G1I4_54_251_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9377 101 290 1.10.3720.10
af_Q47539_71_268_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9374 101 289 1.10.3720.10
af_Q57856_64_258_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9341 98 287 1.10.3720.10
af_P75851_53_247_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9107 94 286 1.10.3720.10
af_Q57856_64_258_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9069 98 287 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A521LYM1-F1-model_v4 ABC transporter permease 0.9503 27 296 GO:0005886
GO:0055085
AF-A0A7X1W4C8-F1-model_v4 deleted 0.9464 87 292
AF-A0A7W6HB96-F1-model_v4 NitT/TauT family transport system permease protein 0.9449 30 300 GO:0005886
GO:0055085
AF-A0A521R206-F1-model_v4 ABC transporter permease 0.9426 32 296 GO:0005886
GO:0055085
AF-A0A160TUK2-F1-model_v4 Taurine transport system permease protein tauC 0.9415 101 294 GO:0005886
GO:0010438
GO:0055085

Feature Viewer

pLDDT pTM Quality
78.94 0.73 High
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Predicted Structure (AlphaFold2)

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