F336484

General Info

Members Datasets Scaffolds Average Seq Length
224 153 448 387

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100062698|Ga0068855_1000626983
Length 421
Sequence LVAALDRVFREEWGGVVASLIGFLGDFDLAEEAAQEAFAVAAERWTYDGIPSNPRAWLMTTARNRATDRIRRDRSLAAKCGLLAADLRAEAPVEASTFPDERLQLIFTCCHPALAIESQVALTLRTLGGLTTDEIARAFLVPEPTMAQRLVRAKRKIKAARIPFRVPPPQLLGERVDAVLAVVYLIFNEGYSGRDELAAEAIWLGRALAQLLPGDPEVHGLLAMMLFHDARRGARFADGELVLLGDQDPSRWDSEQIALGRAQLSDALGLGGRGPYVLQAAIASLHAEIPCDWDQIAALYGELGRLTASPIVELNRAIAVAEAQGAEVGLRIVDQLGLRDFRYLHSTRAELLRRLGRIEEARDAYLQARDLTDDGAERRFLDRRLTELAAADTSPGGPSRPTATLRRDRDRSGRAARQEQR

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
29 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
30 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
56 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
57 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
58 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
74 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
75 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
76 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
77 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
78 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
79 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
80 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
99 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
100 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
128 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
129 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
130 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
131 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
132 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
133 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
136 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
145 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
146 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
151 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
152 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
153 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.21
Metatranscriptomes 0.45
Isolates 1.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.79
Nodule 0
Rhizoplane 6.25
Rhizosphere 86.16
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100062698 3300005563 Bacteria 4339
2 JGI25406J46586_10002309 3300003203 Bacteria 9004
3 Ga0070683_100003245 3300005329 Bacteria 13135
4 Ga0070683_100049793 3300005329 Bacteria 3875
5 Ga0070683_100073321 3300005329 Bacteria 3197
6 Ga0070670_100169672 3300005331 Bacteria 1892
7 Ga0070680_100002472 3300005336 Bacteria 13696
8 Ga0070714_100000005 3300005435 Bacteria 310514
9 Ga0070711_100007245 3300005439 Bacteria 6739
10 Ga0070711_100068058 3300005439 Bacteria 2501
11 Ga0070681_10000767 3300005458 Bacteria 26678
12 Ga0070679_100005636 3300005530 Bacteria 11601
13 Ga0070684_100003032 3300005535 Bacteria 12525
14 Ga0070684_100026043 3300005535 Bacteria 4922
15 Ga0070684_100068567 3300005535 Bacteria 3118
16 Ga0070684_100153263 3300005535 Bacteria 2089
17 Ga0070672_100115978 3300005543 Bacteria 2188
18 Ga0070665_100351415 3300005548 Bacteria 1480
19 Ga0068857_100108373 3300005577 Bacteria 2496
20 Ga0068866_10100380 3300005718 Bacteria 1595
21 Ga0081455_10051560 3300005937 Bacteria 3529
22 Ga0081538_10001305 3300005981 Bacteria 25806
23 Ga0081538_10001360 3300005981 Bacteria 25147
24 Ga0081538_10002035 3300005981 Bacteria 20216
25 Ga0081538_10010375 3300005981 Bacteria 7640
26 Ga0081538_10015767 3300005981 Bacteria 5831
27 Ga0081538_10018122 3300005981 Bacteria 5307
28 Ga0081540_1011536 3300005983 Bacteria 5903
29 Ga0081539_10000182 3300005985 Bacteria 148133
30 Ga0081539_10000877 3300005985 Bacteria 57649
31 Ga0081539_10008931 3300005985 Bacteria 8545
32 Ga0081539_10054645 3300005985 Bacteria 2228
33 Ga0070717_10004261 3300006028 Bacteria 10311
34 Ga0070717_10015649 3300006028 Bacteria 5862
35 Ga0075428_100000529 3300006844 Bacteria 38885
36 Ga0075428_100049819 3300006844 Bacteria 4595
37 Ga0075428_100098403 3300006844 Bacteria 3189
38 Ga0075430_100079318 3300006846 Bacteria 2751
39 Ga0105245_10029317 3300009098 Bacteria 4861
40 Ga0105245_10063613 3300009098 Bacteria 3332
41 Ga0105245_10084722 3300009098 Bacteria 2904
42 Ga0105245_10216883 3300009098 Bacteria 1844
43 Ga0105243_10131534 3300009148 Bacteria 2123
44 Ga0105248_10466234 3300009177 Bacteria 1424
45 Ga0105248_10490047 3300009177 Bacteria 1386
46 Ga0105249_10031775 3300009553 Bacteria 4776
47 Ga0157369_10016584 3300013105 Bacteria 8280
48 Ga0157369_10091342 3300013105 Bacteria 3250
49 Ga0157369_10138535 3300013105 Bacteria 2575
50 Ga0157378_10029024 3300013297 Bacteria 4884
51 Ga0163163_10234972 3300014325 Bacteria 1882
52 Ga0206353_11122658 3300020082 Bacteria 8782
53 Ga0209677_100302 3300025253 Bacteria 32419
54 Ga0207692_10034106 3300025898 Bacteria 2462
55 Ga0207684_10004098 3300025910 Bacteria 13873
56 Ga0207707_10002351 3300025912 Bacteria 17035
57 Ga0207663_10003387 3300025916 Bacteria 7792
58 Ga0207660_10121249 3300025917 Bacteria 1980
59 Ga0207652_10032904 3300025921 Bacteria 4363
60 Ga0207646_10004157 3300025922 Bacteria 15882
61 Ga0207694_10202243 3300025924 Bacteria 1616
62 Ga0207687_10025707 3300025927 Bacteria 3941
63 Ga0207687_10055899 3300025927 Bacteria 2767
64 Ga0207664_10000034 3300025929 Bacteria 175566
65 Ga0207664_10009307 3300025929 Bacteria 6887
66 Ga0207670_10079033 3300025936 Bacteria 2296
67 Ga0207711_10076012 3300025941 Bacteria 2924
68 Ga0207661_10086251 3300025944 Bacteria 2605
69 Ga0207661_10206797 3300025944 Bacteria 1728
70 Ga0207679_10138101 3300025945 Bacteria 1966
71 Ga0207667_10054238 3300025949 Bacteria 4216
72 Ga0207677_10090809 3300026023 Bacteria 2220
73 Ga0207702_10082471 3300026078 Bacteria 2796
74 Ga0207674_10115515 3300026116 Bacteria 2656
75 Ga0207683_10038026 3300026121 Bacteria 4191
76 Ga0268264_10007166 3300028381 Bacteria 9343
77 Ga0307517_10018569 3300028786 Bacteria 8985
78 Ga0307515_10016661 3300028794 Bacteria 13442
79 Ga0307512_10007140 3300030522 Bacteria 11122
80 Ga0307512_10029474 3300030522 Bacteria 4795
81 Ga0307513_10031720 3300031456 Bacteria 5978
82 Ga0307508_10012476 3300031616 Bacteria 7767
83 Ga0307508_10084883 3300031616 Bacteria 2749
84 Ga0307516_10003823 3300031730 Bacteria 19076
85 Ga0307516_10059787 3300031730 Bacteria 3705
86 Ga0307405_10211248 3300031731 Bacteria 1417
87 Ga0307413_10112686 3300031824 Bacteria 1824
88 Ga0307410_10009456 3300031852 Bacteria 5465
89 Ga0307410_10034424 3300031852 Bacteria 3281
90 Ga0307407_10121763 3300031903 Bacteria 1655
91 Ga0307409_100024258 3300031995 Bacteria 4226
92 Ga0307409_100083323 3300031995 Bacteria 2593
93 Ga0307416_100016755 3300032002 Bacteria 5105
94 Ga0307416_100056404 3300032002 Bacteria 3170
95 Ga0307411_10083307 3300032005 Bacteria 2209
96 Ga0307415_100003879 3300032126 Bacteria 7679
97 Ga0307415_100007712 3300032126 Bacteria 5910
98 Ga0307415_100021184 3300032126 Bacteria 3989
99 Ga0307415_100032408 3300032126 Bacteria 3379
100 Ga0373937_0007048 3300036401 Bacteria 9704
101 Ga0395899_0060407 3300037312 Bacteria 2793
102 Ga0395899_0184959 3300037312 Bacteria 1461
103 Ga0395900_0001143 3300037418 Bacteria 33470
104 Ga0395900_0037451 3300037418 Bacteria 5001
105 Ga0395900_0128201 3300037418 Bacteria 2601
106 Ga0395898_0000388 3300037466 Bacteria 96035
107 Ga0395898_0008475 3300037466 Bacteria 10863
108 Ga0395898_0050679 3300037466 Bacteria 4062
109 Ga0395905_0004823 3300037471 Bacteria 13911
110 Ga0436364_1487140 3300037853 Bacteria 1654
111 Ga0395901_0015012 3300038443 Bacteria 7874
112 Ga0395901_0181039 3300038443 Bacteria 2210
113 Ga0436363_0955717 3300039450 Bacteria 5239
114 Ga0436363_1065609 3300039450 Bacteria 1380
115 Ga0439450_002464 3300042008 Bacteria 2913
116 Ga0439455_0000992 3300042012 Bacteria 4452
117 Ga0439463_003680 3300042016 Bacteria 3864
118 Ga0439464_0006131 3300042439 Bacteria 3125
119 Ga0450916_001591 3300042530 Bacteria 2278
120 Ga0439440_0003903 3300042993 Bacteria 2902
121 Ga0466972_0041678 3300044658 Bacteria 2235
122 Ga0466961_0107752 3300044693 Bacteria 1754
123 Ga0466963_0005468 3300044694 Bacteria 7440
124 Ga0466963_0011221 3300044694 Bacteria 5453
125 Ga0466963_0038467 3300044694 Bacteria 3128
126 Ga0466971_0033885 3300044719 Bacteria 2288
127 Ga0466959_0076679 3300045049 Bacteria 2413
128 Ga0466958_0000877 3300045836 Bacteria 13433
129 Ga0466958_0021263 3300045836 Bacteria 3790
130 Ga0466967_0000309 3300045976 Bacteria 22007
131 Ga0466967_0395107 3300045976 Bacteria 1344
132 Ga0495592_0006619 3300046454 Bacteria 8638
133 Ga0495638_0133825 3300046460 Bacteria 1454
134 Ga0495651_0009238 3300046462 Bacteria 7567
135 Ga0495653_0001229 3300046463 Bacteria 19892
136 Ga0495608_0002033 3300046511 Bacteria 14522
137 Ga0495628_0003880 3300046516 Bacteria 13327
138 Ga0495652_0006358 3300046529 Bacteria 11000
139 Ga0495645_0067071 3300046543 Bacteria 2591
140 Ga0495667_0001326 3300046559 Bacteria 16263
141 Ga0495635_0008108 3300046663 Bacteria 7339
142 Ga0495657_0000485 3300046675 Bacteria 37337
143 Ga0495599_0037325 3300046678 Bacteria 3052
144 Ga0495646_0022281 3300046680 Bacteria 3997
145 Ga0495600_0001193 3300046809 Bacteria 14219
146 Ga0495604_0002275 3300047317 Bacteria 15377
147 Ga0495674_0024047 3300047319 Bacteria 5605
148 Ga0495680_0000890 3300047322 Bacteria 33201
149 Ga0495675_0008627 3300047444 Bacteria 6319
150 Ga0495602_0010612 3300048088 Bacteria 9557
151 Ga0496102_0049588 3300048905 Bacteria 3820
152 Ga0496102_0219064 3300048905 Bacteria 1794
153 Ga0496102_0497761 3300048905 Bacteria 1141
154 Ga0496104_0015888 3300048907 Bacteria 6830
155 Ga0496104_0049555 3300048907 Bacteria 3960
156 Ga0496105_0020084 3300048908 Bacteria 5393
157 Ga0496108_0013587 3300048911 Bacteria 6645
158 Ga0496109_0502309 3300048912 Bacteria 1145
159 Ga0496112_0035067 3300048915 Bacteria 4883
160 Ga0496113_0057844 3300048916 Bacteria 2915
161 Ga0496113_0158784 3300048916 Bacteria 1787
162 Ga0496114_0222983 3300048917 Bacteria 1655
163 Ga0496114_0385493 3300048917 Bacteria 1241
164 Ga0496115_0101487 3300048918 Bacteria 2359
165 Ga0501031_0083401 3300049568 Bacteria 2083
166 Ga0501033_0028354 3300049570 Bacteria 4207
167 Ga0501033_0083668 3300049570 Bacteria 2339
168 Ga0501036_0007910 3300049572 Bacteria 8699
169 Ga0501037_0081513 3300049573 Bacteria 2346
170 Ga0501038_0002935 3300049574 Bacteria 15911
171 Ga0501038_0106428 3300049574 Bacteria 2328
172 Ga0501039_0003444 3300049575 Bacteria 11817
173 Ga0501039_0115106 3300049575 Bacteria 2104
174 Ga0501040_0002273 3300049576 Bacteria 12341
175 Ga0501040_0006339 3300049576 Bacteria 7683
176 Ga0501041_0000245 3300049577 Bacteria 25342
177 Ga0501041_0051129 3300049577 Bacteria 2518
178 Ga0501042_0005686 3300049578 Bacteria 8047
179 Ga0501042_0099157 3300049578 Bacteria 2094
180 Ga0501043_0048856 3300049579 Bacteria 3325
181 Ga0501046_0016516 3300049580 Bacteria 6178
182 Ga0501047_0197065 3300049581 Bacteria 1876
183 Ga0501048_0000537 3300049582 Bacteria 26741
184 Ga0501048_0073555 3300049582 Bacteria 2412
185 Ga0501071_0068989 3300049587 Bacteria 2573
186 Ga0501072_0002144 3300049588 Bacteria 14724
187 Ga0501072_0069902 3300049588 Bacteria 2772
188 Ga0501074_0164999 3300049590 Bacteria 1581
189 Ga0501075_0006442 3300049591 Bacteria 8082
190 Ga0501075_0090966 3300049591 Bacteria 2315
191 Ga0501076_0000087 3300049592 Bacteria 48819
192 Ga0501077_0000517 3300049593 Bacteria 23391
193 Ga0501077_0007523 3300049593 Bacteria 6718
194 Ga0501079_0001692 3300049741 Bacteria 15694
195 Ga0501079_0127489 3300049741 Bacteria 1979
196 Ga0501080_0139544 3300049742 Bacteria 2241
197 Ga0501081_0005858 3300049743 Bacteria 7955
198 Ga0501081_0056201 3300049743 Bacteria 2719
199 Ga0501083_0168212 3300049744 Bacteria 1433
200 Ga0501035_0013497 3300049822 Bacteria 7540
201 Ga0501044_0058784 3300049823 Bacteria 3941
202 Ga0501045_0000005 3300049824 Bacteria 86754
203 Ga0501045_0026628 3300049824 Bacteria 4161
204 Ga0501045_0027433 3300049824 Bacteria 4104
205 nmdc:mga05p37_16572_c1 3300050507 Bacteria 8877
206 nmdc:mga05p37_48257_c1 3300050507 Bacteria 5238
207 nmdc:mga05p37_78119_c1 3300050507 Bacteria 4075
208 nmdc:mga09592_1103_c1 3300050508 Bacteria 21456
209 nmdc:mga0qj67_15387_c1 3300050509 Bacteria 5792
210 nmdc:mga0qj67_419_c2 3300050509 Bacteria 24380
211 nmdc:mga06r32_481_c1 3300050510 Bacteria 30864
212 nmdc:mga06r32_49961_c1 3300050510 Bacteria 4001
213 Ga0500646_0025862 3300053090 Bacteria 1588
214 Ga0500651_0171849 3300053093 Bacteria 1291
215 Ga0500556_0001828 3300053104 Bacteria 7787
216 Ga0501084_0005022 3300054114 Bacteria 10821
217 Ga0501084_0033066 3300054114 Bacteria 4326
218 Ga0501082_0006290 3300060353 Bacteria 10298
219 Ga0501082_0026141 3300060353 Bacteria 5031
220 Ga0466962_0035112 3300061719 Bacteria 2400
221 Ga0530510_0007456 3300061734 Bacteria 7617
222 2515852425 2515154155 Bacteria 7985436
223 2623590138 2622736626 Bacteria 7181580
224 2895451164 2895442618 Bacteria 11027144
225 Ga0068855_100062698
226 JGI25406J46586_10002309
227 Ga0070683_100003245
228 Ga0070683_100049793
229 Ga0070683_100073321
230 Ga0070670_100169672
231 Ga0070680_100002472
232 Ga0070714_100000005
233 Ga0070711_100007245
234 Ga0070711_100068058
235 Ga0070681_10000767
236 Ga0070679_100005636
237 Ga0070684_100003032
238 Ga0070684_100026043
239 Ga0070684_100068567
240 Ga0070684_100153263
241 Ga0070672_100115978
242 Ga0070665_100351415
243 Ga0068857_100108373
244 Ga0068866_10100380
245 Ga0081455_10051560
246 Ga0081538_10001305
247 Ga0081538_10001360
248 Ga0081538_10002035
249 Ga0081538_10010375
250 Ga0081538_10015767
251 Ga0081538_10018122
252 Ga0081540_1011536
253 Ga0081539_10000182
254 Ga0081539_10000877
255 Ga0081539_10008931
256 Ga0081539_10054645
257 Ga0070717_10004261
258 Ga0070717_10015649
259 Ga0075428_100000529
260 Ga0075428_100049819
261 Ga0075428_100098403
262 Ga0075430_100079318
263 Ga0105245_10029317
264 Ga0105245_10063613
265 Ga0105245_10084722
266 Ga0105245_10216883
267 Ga0105243_10131534
268 Ga0105248_10466234
269 Ga0105248_10490047
270 Ga0105249_10031775
271 Ga0157369_10016584
272 Ga0157369_10091342
273 Ga0157369_10138535
274 Ga0157378_10029024
275 Ga0163163_10234972
276 Ga0206353_11122658
277 Ga0209677_100302
278 Ga0207692_10034106
279 Ga0207684_10004098
280 Ga0207707_10002351
281 Ga0207663_10003387
282 Ga0207660_10121249
283 Ga0207652_10032904
284 Ga0207646_10004157
285 Ga0207694_10202243
286 Ga0207687_10025707
287 Ga0207687_10055899
288 Ga0207664_10000034
289 Ga0207664_10009307
290 Ga0207670_10079033
291 Ga0207711_10076012
292 Ga0207661_10086251
293 Ga0207661_10206797
294 Ga0207679_10138101
295 Ga0207667_10054238
296 Ga0207677_10090809
297 Ga0207702_10082471
298 Ga0207674_10115515
299 Ga0207683_10038026
300 Ga0268264_10007166
301 Ga0307517_10018569
302 Ga0307515_10016661
303 Ga0307512_10007140
304 Ga0307512_10029474
305 Ga0307513_10031720
306 Ga0307508_10012476
307 Ga0307508_10084883
308 Ga0307516_10003823
309 Ga0307516_10059787
310 Ga0307405_10211248
311 Ga0307413_10112686
312 Ga0307410_10009456
313 Ga0307410_10034424
314 Ga0307407_10121763
315 Ga0307409_100024258
316 Ga0307409_100083323
317 Ga0307416_100016755
318 Ga0307416_100056404
319 Ga0307411_10083307
320 Ga0307415_100003879
321 Ga0307415_100007712
322 Ga0307415_100021184
323 Ga0307415_100032408
324 Ga0373937_0007048
325 Ga0395899_0060407
326 Ga0395899_0184959
327 Ga0395900_0001143
328 Ga0395900_0037451
329 Ga0395900_0128201
330 Ga0395898_0000388
331 Ga0395898_0008475
332 Ga0395898_0050679
333 Ga0395905_0004823
334 Ga0436364_1487140
335 Ga0395901_0015012
336 Ga0395901_0181039
337 Ga0436363_0955717
338 Ga0436363_1065609
339 Ga0439450_002464
340 Ga0439455_0000992
341 Ga0439463_003680
342 Ga0439464_0006131
343 Ga0450916_001591
344 Ga0439440_0003903
345 Ga0466972_0041678
346 Ga0466961_0107752
347 Ga0466963_0005468
348 Ga0466963_0011221
349 Ga0466963_0038467
350 Ga0466971_0033885
351 Ga0466959_0076679
352 Ga0466958_0000877
353 Ga0466958_0021263
354 Ga0466967_0000309
355 Ga0466967_0395107
356 Ga0495592_0006619
357 Ga0495638_0133825
358 Ga0495651_0009238
359 Ga0495653_0001229
360 Ga0495608_0002033
361 Ga0495628_0003880
362 Ga0495652_0006358
363 Ga0495645_0067071
364 Ga0495667_0001326
365 Ga0495635_0008108
366 Ga0495657_0000485
367 Ga0495599_0037325
368 Ga0495646_0022281
369 Ga0495600_0001193
370 Ga0495604_0002275
371 Ga0495674_0024047
372 Ga0495680_0000890
373 Ga0495675_0008627
374 Ga0495602_0010612
375 Ga0496102_0049588
376 Ga0496102_0219064
377 Ga0496102_0497761
378 Ga0496104_0015888
379 Ga0496104_0049555
380 Ga0496105_0020084
381 Ga0496108_0013587
382 Ga0496109_0502309
383 Ga0496112_0035067
384 Ga0496113_0057844
385 Ga0496113_0158784
386 Ga0496114_0222983
387 Ga0496114_0385493
388 Ga0496115_0101487
389 Ga0501031_0083401
390 Ga0501033_0028354
391 Ga0501033_0083668
392 Ga0501036_0007910
393 Ga0501037_0081513
394 Ga0501038_0002935
395 Ga0501038_0106428
396 Ga0501039_0003444
397 Ga0501039_0115106
398 Ga0501040_0002273
399 Ga0501040_0006339
400 Ga0501041_0000245
401 Ga0501041_0051129
402 Ga0501042_0005686
403 Ga0501042_0099157
404 Ga0501043_0048856
405 Ga0501046_0016516
406 Ga0501047_0197065
407 Ga0501048_0000537
408 Ga0501048_0073555
409 Ga0501071_0068989
410 Ga0501072_0002144
411 Ga0501072_0069902
412 Ga0501074_0164999
413 Ga0501075_0006442
414 Ga0501075_0090966
415 Ga0501076_0000087
416 Ga0501077_0000517
417 Ga0501077_0007523
418 Ga0501079_0001692
419 Ga0501079_0127489
420 Ga0501080_0139544
421 Ga0501081_0005858
422 Ga0501081_0056201
423 Ga0501083_0168212
424 Ga0501035_0013497
425 Ga0501044_0058784
426 Ga0501045_0000005
427 Ga0501045_0026628
428 Ga0501045_0027433
429 nmdc:mga05p37_16572_c1
430 nmdc:mga05p37_48257_c1
431 nmdc:mga05p37_78119_c1
432 nmdc:mga09592_1103_c1
433 nmdc:mga0qj67_15387_c1
434 nmdc:mga0qj67_419_c2
435 nmdc:mga06r32_481_c1
436 nmdc:mga06r32_49961_c1
437 Ga0500646_0025862
438 Ga0500651_0171849
439 Ga0500556_0001828
440 Ga0501084_0005022
441 Ga0501084_0033066
442 Ga0501082_0006290
443 Ga0501082_0026141
444 Ga0466962_0035112
445 Ga0530510_0007456
446 2515852425
447 2623590138
448 2895451164

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20239

DUF6596

Family of unknown function (DUF6596)

175

268

0.96

PF08281

Sigma70_r4_2

Sigma-70, region 4

104

157

0.94

PF04542

Sigma70_r2

Sigma-70 region 2

10

76

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kd7-assembly2.cif.gz_B designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.8666 292 372
3upv-assembly1.cif.gz_A tpr2b-domain:phsp70-complex of yeast sti1 0.8631 289 391
1na3-assembly2.cif.gz_B design of stable alpha-helical arrays from an idealized tpr motif 0.8613 308 393
3ma5-assembly1.cif.gz_A crystal structure of the tetratricopeptide repeat domain protein q2s6c5_salrd from salinibacter ruber. northeast structural genomics consortium target srr115c. 0.8602 309 390
1na3-assembly1.cif.gz_A design of stable alpha-helical arrays from an idealized tpr motif 0.8591 308 393
ID Description Score Start End Superfamily
af_Q8IDE7_192_315_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8895 310 392 1.25.40.10
af_P0AGM5_187_259_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8891 317 385 1.25.40.10
af_K7KUY6_39_195_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8855 289 392 1.25.40.10
af_A0A1D6KFP0_116_204_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8815 310 389 1.25.40.10
af_A0A0R4IV14_290_391_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.876 310 391 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A7W1M2D5-F1-model_v4 DUF6596 domain-containing protein 0.9937 212 387
AF-A0A519FTM8-F1-model_v4 RNA polymerase sigma factor 0.9869 194 388
AF-A0A4V2XDF4-F1-model_v4 RNA polymerase sigma factor 0.9836 219 388
AF-A0A7W1M2D5-F1-model_v4 DUF6596 domain-containing protein 0.9826 212 387
AF-A0A5R8MEV5-F1-model_v4 RNA polymerase subunit sigma-24 0.98 278 388

Map