F335942

General Info

Members Datasets Scaffolds Average Seq Length
223 144 215 254

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0018371|Ga0495668_0018371_613_1437
Length 274
Sequence MRSRHGNARNLSFSRCEGLEGGMSSPTSARSSIDPAEVERFSRIAAEWWDPRGKFAPLHKFNPVRLAFIRDQALYRFQRDAKARRPFEGLRLLDIGCGGGLLSEPMTRLGFQVVGVDASERNIGTASAHAAEQGLEIDYRASTAEALVDAGEPLFDVILNMEVIEHVADPGDYLRSCARLLKPGGLMIVATMNRTLKAFALAKVGAEYVLRWLPAGTHDWSKFLKPNEIRDFLSSERVVVDGPFGVVFNPLTGRWTESADTDVNYMMTVVRDAA

Samples

Sample ID Description Type Environment
1 2534681786 Brucella suis 92/29 Isolate Unclassified
2 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
3 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
4 2643221629 Devosia sp. Root105 Isolate Unclassified
5 2643221662 Devosia sp. Root413D1 Isolate Unclassified
6 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
7 2751185800 Brucella pituitosa AA2 Isolate Unclassified
8 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
9 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
10 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
11 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
84 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
93 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
94 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
102 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
105 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
106 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
107 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
108 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
109 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
124 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
129 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
132 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
133 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
134 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
135 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
136 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
139 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
140 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
141 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
142 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
143 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
144 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.41
Metatranscriptomes 0
Isolates 3.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13
Nodule 0
Rhizoplane 2.69
Rhizosphere 76.23
Stem 0
Stem Tuber 0
Unclassified 8.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055530_10007478 3300003791 Bacteria 4588
2 Ga0055530_10015327 3300003791 Bacteria 2508
3 Ga0055531_10007480 3300003794 Bacteria 5952
4 Ga0055531_10028042 3300003794 Bacteria 1954
5 Ga0055543_1011565 3300004625 Bacteria 1801
6 Ga0065165_1000528 3300005262 Bacteria 58452
7 Ga0070658_10567537 3300005327 Bacteria 982
8 Ga0070658_10620461 3300005327 Bacteria 938
9 Ga0070680_100011957 3300005336 Bacteria 6735
10 Ga0068868_100254471 3300005338 Bacteria 1479
11 Ga0070660_100133368 3300005339 Bacteria 1989
12 Ga0070660_100315279 3300005339 Bacteria 1284
13 Ga0070691_10008578 3300005341 Bacteria 4680
14 Ga0070671_100174838 3300005355 Bacteria 1816
15 Ga0070671_100187965 3300005355 Bacteria 1750
16 Ga0070673_100129393 3300005364 Bacteria 2116
17 Ga0070659_100003586 3300005366 Bacteria 11040
18 Ga0070714_100110311 3300005435 Bacteria 2435
19 Ga0070681_10049099 3300005458 Bacteria 4215
20 Ga0070681_10070135 3300005458 Bacteria 3470
21 Ga0070679_100053015 3300005530 Bacteria 4037
22 Ga0068853_100082734 3300005539 Bacteria 2812
23 Ga0068853_100607547 3300005539 Bacteria 1039
24 Ga0070665_100000015 3300005548 Bacteria 462744
25 Ga0068855_100024909 3300005563 Bacteria 7159
26 Ga0068855_100101329 3300005563 Bacteria 3315
27 Ga0070664_100061488 3300005564 Bacteria 3201
28 Ga0070664_100689752 3300005564 Bacteria 951
29 Ga0068856_100406624 3300005614 Bacteria 1381
30 Ga0068864_100000108 3300005618 Bacteria 80532
31 Ga0068864_100062778 3300005618 Bacteria 3219
32 Ga0068861_100684596 3300005719 Bacteria 951
33 Ga0068863_100000037 3300005841 Bacteria 162638
34 Ga0068863_100105862 3300005841 Bacteria 2676
35 Ga0068860_100063992 3300005843 Bacteria 3493
36 Ga0068862_100222350 3300005844 Bacteria 1710
37 Ga0068862_100292992 3300005844 Bacteria 1495
38 Ga0070717_10009511 3300006028 Bacteria 7309
39 Ga0070717_10089778 3300006028 Bacteria 2592
40 Ga0068871_100179909 3300006358 Bacteria 1817
41 Ga0105240_10017104 3300009093 Bacteria 9792
42 Ga0105240_10033081 3300009093 Bacteria 6685
43 Ga0105240_10039874 3300009093 Bacteria 6010
44 Ga0105240_10061173 3300009093 Bacteria 4693
45 Ga0105242_10336306 3300009176 Bacteria 1390
46 Ga0105248_10004774 3300009177 Bacteria 14999
47 Ga0105248_10187129 3300009177 Bacteria 2333
48 Ga0105237_10069665 3300009545 Bacteria 3513
49 Ga0105238_10018109 3300009551 Bacteria 7162
50 Ga0105238_10020279 3300009551 Bacteria 6768
51 Ga0105238_10283384 3300009551 Bacteria 1638
52 Ga0105239_10091421 3300010375 Bacteria 3358
53 Ga0157372_10017950 3300013307 Bacteria 7603
54 Ga0157372_10102601 3300013307 Bacteria 3268
55 Ga0163163_10021250 3300014325 Bacteria 6122
56 Ga0163163_10793607 3300014325 Bacteria 1010
57 Ga0182008_10220390 3300014497 Bacteria 970
58 Ga0213876_10014887 3300021384 Bacteria 4123
59 Ga0209026_1003431 3300025250 Bacteria 5198
60 Ga0209676_1000289 3300025292 Bacteria 103078
61 Ga0209758_1002695 3300025297 Bacteria 17511
62 Ga0209050_1000029 3300025298 Bacteria 465801
63 Ga0209050_1003828 3300025298 Bacteria 10734
64 Ga0209051_1004291 3300025303 Bacteria 8864
65 Ga0209257_1000271 3300025304 Bacteria 118632
66 Ga0209257_1005827 3300025304 Bacteria 8357
67 Ga0209257_1015837 3300025304 Bacteria 3100
68 Ga0207685_10049637 3300025905 Bacteria 1613
69 Ga0207705_10361258 3300025909 Bacteria 1120
70 Ga0207707_10049224 3300025912 Bacteria 3671
71 Ga0207695_10001878 3300025913 Bacteria 32884
72 Ga0207695_10013646 3300025913 Bacteria 9674
73 Ga0207695_10018741 3300025913 Bacteria 7990
74 Ga0207695_10065544 3300025913 Bacteria 3735
75 Ga0207660_10140583 3300025917 Bacteria 1846
76 Ga0207657_10087718 3300025919 Bacteria 2602
77 Ga0207657_10293991 3300025919 Bacteria 1288
78 Ga0207694_10029235 3300025924 Bacteria 4204
79 Ga0207694_10193436 3300025924 Bacteria 1653
80 Ga0207694_10204334 3300025924 Bacteria 1608
81 Ga0207644_10191443 3300025931 Bacteria 1608
82 Ga0207644_10301035 3300025931 Bacteria 1292
83 Ga0207644_10474162 3300025931 Bacteria 1030
84 Ga0207690_10000854 3300025932 Bacteria 19534
85 Ga0207711_10055492 3300025941 Bacteria 3401
86 Ga0207711_10064738 3300025941 Bacteria 3158
87 Ga0207689_10385400 3300025942 Bacteria 1167
88 Ga0207679_10049820 3300025945 Bacteria 3057
89 Ga0207667_10323670 3300025949 Bacteria 1574
90 Ga0207651_10169524 3300025960 Bacteria 1720
91 Ga0207677_10118306 3300026023 Bacteria 1988
92 Ga0207639_10033760 3300026041 Bacteria 3777
93 Ga0207639_10058428 3300026041 Bacteria 2967
94 Ga0207702_10595493 3300026078 Bacteria 1084
95 Ga0207641_10000034 3300026088 Bacteria 217752
96 Ga0207641_10076714 3300026088 Bacteria 2890
97 Ga0207676_10000506 3300026095 Bacteria 32940
98 Ga0207676_10025133 3300026095 Bacteria 4417
99 Ga0207676_10868357 3300026095 Bacteria 883
100 Ga0209981_1002969 3300027378 Bacteria 2182
101 Ga0209983_1008084 3300027665 Bacteria 2151
102 Ga0268266_10000005 3300028379 Bacteria 1448194
103 Ga0268264_10065122 3300028381 Bacteria 3069
104 Ga0307517_10001819 3300028786 Bacteria 34988
105 Ga0307517_10090718 3300028786 Bacteria 2504
106 Ga0307515_10208724 3300028794 Bacteria 1804
107 Ga0307515_10467076 3300028794 Bacteria 875
108 Ga0265338_10019328 3300028800 Bacteria 7234
109 Ga0265338_10064819 3300028800 Bacteria 3174
110 Ga0307511_10007876 3300030521 Bacteria 10694
111 Ga0265331_10000054 3300031250 Bacteria 180181
112 Ga0265331_10025396 3300031250 Bacteria 2991
113 Ga0265327_10000179 3300031251 Bacteria 135005
114 Ga0265327_10000180 3300031251 Bacteria 134665
115 Ga0307513_10036912 3300031456 Bacteria 5443
116 Ga0307513_10047339 3300031456 Bacteria 4679
117 Ga0307411_10272619 3300032005 Bacteria 1343
118 Ga0307411_10349616 3300032005 Bacteria 1205
119 Ga0307510_10072375 3300033180 Bacteria 3425
120 Ga0373944_0015116 3300035089 Bacteria 2162
121 Ga0373927_0005441 3300035695 Bacteria 8778
122 Ga0373925_0000067 3300037068 Bacteria 110348
123 Ga0395899_0000095 3300037312 Bacteria 152790
124 Ga0395899_0227012 3300037312 Bacteria 1291
125 Ga0395900_0000006 3300037418 Bacteria 495364
126 Ga0395900_0055267 3300037418 Bacteria 4088
127 Ga0395900_0384662 3300037418 Bacteria 1370
128 Ga0395898_0095626 3300037466 Bacteria 2854
129 Ga0395905_0004980 3300037471 Bacteria 13685
130 Ga0395905_0030941 3300037471 Bacteria 5041
131 Ga0395905_0041641 3300037471 Bacteria 4310
132 Ga0395905_0302390 3300037471 Bacteria 1487
133 Ga0395901_0000001 3300038443 Bacteria 800383
134 Ga0395901_0012008 3300038443 Bacteria 8787
135 Ga0436365_0506572 3300039437 Bacteria 66930
136 Ga0439465_0046343 3300041413 Bacteria 1415
137 Ga0439435_0020397 3300042436 Bacteria 1709
138 Ga0453684_0052408 3300044712 Bacteria 5336
139 Ga0495590_0005030 3300046457 Bacteria 5272
140 Ga0495638_0006686 3300046460 Bacteria 8355
141 Ga0495583_0028778 3300046506 Bacteria 2727
142 Ga0495606_0214605 3300046507 Bacteria 1088
143 Ga0495610_0003215 3300046512 Bacteria 12928
144 Ga0495631_0000827 3300046518 Bacteria 19791
145 Ga0495645_0036120 3300046543 Bacteria 3602
146 Ga0495668_0001352 3300046616 Bacteria 24072
147 Ga0495668_0015057 3300046616 Bacteria 4524
148 Ga0495668_0018371 3300046616 Bacteria 4040
149 Ga0495668_0143885 3300046616 Bacteria 1305
150 Ga0495625_0065330 3300046660 Bacteria 2565
151 Ga0495625_0193883 3300046660 Bacteria 1344
152 Ga0495669_0000864 3300046684 Bacteria 12817
153 Ga0495672_0022228 3300047320 Bacteria 4127
154 Ga0495673_0000293 3300047469 Bacteria 67070
155 Ga0495686_0001958 3300047472 Bacteria 20461
156 Ga0495686_0008998 3300047472 Bacteria 7247
157 Ga0496104_0125183 3300048907 Bacteria 2468
158 Ga0496109_0098128 3300048912 Bacteria 2716
159 Ga0496112_0040232 3300048915 Bacteria 4570
160 Ga0496112_0115471 3300048915 Bacteria 2655
161 Ga0496112_0162985 3300048915 Bacteria 2196
162 Ga0496115_0003901 3300048918 Bacteria 10746
163 Ga0501031_0042846 3300049568 Bacteria 2955
164 Ga0501032_0106328 3300049569 Bacteria 1859
165 Ga0501032_0328864 3300049569 Bacteria 986
166 Ga0501033_0069590 3300049570 Bacteria 2586
167 Ga0501033_0338908 3300049570 Bacteria 1054
168 Ga0501034_0009869 3300049571 Bacteria 9981
169 Ga0501034_0015780 3300049571 Bacteria 7757
170 Ga0501036_0402245 3300049572 Bacteria 1142
171 Ga0501037_0030308 3300049573 Bacteria 3998
172 Ga0501037_0036057 3300049573 Bacteria 3646
173 Ga0501037_0061862 3300049573 Bacteria 2730
174 Ga0501038_0021481 3300049574 Bacteria 5792
175 Ga0501038_0082089 3300049574 Bacteria 2714
176 Ga0501043_0008623 3300049579 Bacteria 8035
177 Ga0501043_0030528 3300049579 Bacteria 4236
178 Ga0501043_0308987 3300049579 Bacteria 1207
179 Ga0501046_0007660 3300049580 Bacteria 9472
180 Ga0501047_0000825 3300049581 Bacteria 32128
181 Ga0501047_0092861 3300049581 Bacteria 2897
182 Ga0501047_0095299 3300049581 Bacteria 2855
183 Ga0501047_0127906 3300049581 Bacteria 2420
184 Ga0501047_0321055 3300049581 Bacteria 1388
185 Ga0501047_0541718 3300049581 Unclassified 989
186 Ga0501067_0004277 3300049583 Bacteria 7870
187 Ga0501068_0043118 3300049584 Bacteria 2714
188 Ga0501073_0006568 3300049589 Bacteria 8655
189 Ga0501073_0020943 3300049589 Bacteria 4716
190 Ga0501074_0132512 3300049590 Bacteria 1783
191 Ga0501080_0001485 3300049742 Bacteria 19782
192 Ga0501080_0028835 3300049742 Bacteria 5167
193 Ga0501083_0050980 3300049744 Bacteria 2784
194 Ga0501035_0038939 3300049822 Bacteria 4304
195 Ga0501035_0064812 3300049822 Bacteria 3246
196 Ga0501044_0001074 3300049823 Bacteria 32638
197 Ga0501044_0001920 3300049823 Bacteria 24059
198 Ga0501044_0006428 3300049823 Bacteria 12983
199 Ga0501044_0025934 3300049823 Bacteria 6211
200 Ga0501044_0192244 3300049823 Unclassified 2003
201 Ga0500635_0000085 3300053080 Bacteria 59878
202 Ga0500578_0000309 3300053086 Bacteria 59973
203 Ga0500643_055145 3300053087 Bacteria 1126
204 Ga0500644_0000036 3300053088 Bacteria 80681
205 Ga0500641_0029924 3300053096 Bacteria 2136
206 Ga0500556_0000926 3300053104 Bacteria 15947
207 Ga0500562_001490 3300053108 Bacteria 5773
208 Ga0500595_003683 3300053119 Bacteria 7078
209 Ga0500595_020104 3300053119 Bacteria 2410
210 Ga0500568_0073434 3300053139 Bacteria 1307
211 Ga0500622_0001059 3300053156 Bacteria 22916
212 Ga0500638_068818 3300053162 Bacteria 1694
213 Ga0500636_0005219 3300053177 Bacteria 7389
214 Ga0500637_0017333 3300053178 Bacteria 3854
215 Ga0500645_025603 3300053730 Bacteria 1799

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0402245 Ga0501036_0402245_495_1124 209
2 3300044712 Ga0453684_0052408 Ga0453684_0052408_650_1426 221
3 3300053087 Ga0500643_055145 Ga0500643_055145_39_758 237
4 iso_pu_bacteria 2643221629 2644169310 241
5 iso_pu_bacteria 2643221662 2644350705 241
6 3300037471 Ga0395905_0030941 Ga0395905_0030941_227_958 243
7 3300041413 Ga0439465_0046343 Ga0439465_0046343_235_972 243
8 3300053139 Ga0500568_0073434 Ga0500568_0073434_111_848 243
9 3300014325 Ga0163163_10793607 Ga0163163_107936072 244
10 3300025909 Ga0207705_10361258 Ga0207705_103612581 244
11 3300031251 Ga0265327_10000180 Ga0265327_1000018015 244
12 3300046507 Ga0495606_0214605 Ga0495606_0214605_185_928 244
13 3300046543 Ga0495645_0036120 Ga0495645_0036120_663_1436 244
14 iso_pu_bacteria 2534681786 2535485332 244
15 iso_pu_bacteria 2751185800 2753360332 244
16 iso_pu_bacteria 2915650412 2915650420 244
17 3300009545 Ga0105237_10069665 Ga0105237_100696652 245
18 3300009551 Ga0105238_10018109 Ga0105238_100181093 245
19 3300021384 Ga0213876_10014887 Ga0213876_100148874 245
20 3300025924 Ga0207694_10029235 Ga0207694_100292352 245
21 3300026095 Ga0207676_10868357 Ga0207676_108683571 245
22 3300028794 Ga0307515_10208724 Ga0307515_102087242 245
23 3300028794 Ga0307515_10467076 Ga0307515_104670761 245
24 3300037312 Ga0395899_0000095 Ga0395899_0000095_57919_58665 245
25 3300037418 Ga0395900_0000006 Ga0395900_0000006_283403_284149 245
26 3300037418 Ga0395900_0384662 Ga0395900_0384662_14_820 245
27 3300037471 Ga0395905_0004980 Ga0395905_0004980_12700_13446 245
28 3300037471 Ga0395905_0302390 Ga0395905_0302390_656_1402 245
29 3300038443 Ga0395901_0000001 Ga0395901_0000001_326651_327397 245
30 3300049570 Ga0501033_0338908 Ga0501033_0338908_44_790 245
31 3300049579 Ga0501043_0308987 Ga0501043_0308987_68_814 245
32 3300049581 Ga0501047_0000825 Ga0501047_0000825_5212_5958 245
33 3300049581 Ga0501047_0092861 Ga0501047_0092861_922_1668 245
34 3300049822 Ga0501035_0064812 Ga0501035_0064812_1333_2079 245
35 3300049823 Ga0501044_0001920 Ga0501044_0001920_4105_4851 245
36 3300005327 Ga0070658_10567537 Ga0070658_105675372 246
37 3300005339 Ga0070660_100315279 Ga0070660_1003152792 246
38 3300005548 Ga0070665_100000015 Ga0070665_100000015371 246
39 3300009093 Ga0105240_10033081 Ga0105240_100330814 246
40 3300009551 Ga0105238_10020279 Ga0105238_100202794 246
41 3300025919 Ga0207657_10293991 Ga0207657_102939912 246
42 3300025924 Ga0207694_10193436 Ga0207694_101934361 246
43 3300028379 Ga0268266_10000005 Ga0268266_10000005747 246
44 3300046460 Ga0495638_0006686 Ga0495638_0006686_6559_7329 246
45 3300049568 Ga0501031_0042846 Ga0501031_0042846_2099_2848 246
46 3300049569 Ga0501032_0106328 Ga0501032_0106328_885_1634 246
47 3300049573 Ga0501037_0036057 Ga0501037_0036057_361_1110 246
48 3300049574 Ga0501038_0082089 Ga0501038_0082089_1882_2628 246
49 3300049579 Ga0501043_0030528 Ga0501043_0030528_2673_3422 246
50 3300049589 Ga0501073_0020943 Ga0501073_0020943_3473_4222 246
51 3300049742 Ga0501080_0028835 Ga0501080_0028835_177_923 246
52 3300049823 Ga0501044_0025934 Ga0501044_0025934_5356_6105 246
53 iso_pu_bacteria 2643221545 2643748561 246
54 iso_pu_bacteria 2643221598 2643999948 246
55 iso_pu_bacteria 2643221691 2644510235 246
56 3300003791 Ga0055530_10015327 Ga0055530_100153273 247
57 3300005435 Ga0070714_100110311 Ga0070714_1001103112 247
58 3300005719 Ga0068861_100684596 Ga0068861_1006845962 247
59 3300005843 Ga0068860_100063992 Ga0068860_1000639922 247
60 3300006028 Ga0070717_10089778 Ga0070717_100897782 247
61 3300009093 Ga0105240_10039874 Ga0105240_100398744 247
62 3300013307 Ga0157372_10102601 Ga0157372_101026013 247
63 3300025292 Ga0209676_1000289 Ga0209676_100028934 247
64 3300025298 Ga0209050_1003828 Ga0209050_10038283 247
65 3300025303 Ga0209051_1004291 Ga0209051_10042916 247
66 3300025304 Ga0209257_1015837 Ga0209257_10158373 247
67 3300025905 Ga0207685_10049637 Ga0207685_100496372 247
68 3300025913 Ga0207695_10018741 Ga0207695_100187415 247
69 3300025942 Ga0207689_10385400 Ga0207689_103854001 247
70 3300028381 Ga0268264_10065122 Ga0268264_100651225 247
71 3300032005 Ga0307411_10349616 Ga0307411_103496162 247
72 3300042436 Ga0439435_0020397 Ga0439435_0020397_881_1654 247
73 3300046457 Ga0495590_0005030 Ga0495590_0005030_704_1477 247
74 3300046512 Ga0495610_0003215 Ga0495610_0003215_7079_7837 247
75 3300046518 Ga0495631_0000827 Ga0495631_0000827_4966_5739 247
76 3300046616 Ga0495668_0001352 Ga0495668_0001352_11111_11884 247
77 3300047472 Ga0495686_0001958 Ga0495686_0001958_18119_18892 247
78 3300049570 Ga0501033_0069590 Ga0501033_0069590_500_1246 247
79 3300049571 Ga0501034_0009869 Ga0501034_0009869_5644_6390 247
80 3300049573 Ga0501037_0061862 Ga0501037_0061862_1406_2152 247
81 3300049581 Ga0501047_0321055 Ga0501047_0321055_295_1065 247
82 3300049590 Ga0501074_0132512 Ga0501074_0132512_973_1743 247
83 3300049823 Ga0501044_0001074 Ga0501044_0001074_30882_31628 247
84 3300053086 Ga0500578_0000309 Ga0500578_0000309_38943_39701 247
85 3300053104 Ga0500556_0000926 Ga0500556_0000926_10796_11575 247
86 3300053156 Ga0500622_0001059 Ga0500622_0001059_19811_20584 247
87 3300005327 Ga0070658_10620461 Ga0070658_106204611 248
88 3300005338 Ga0068868_100254471 Ga0068868_1002544712 248
89 3300005339 Ga0070660_100133368 Ga0070660_1001333682 248
90 3300005341 Ga0070691_10008578 Ga0070691_100085783 248
91 3300005355 Ga0070671_100174838 Ga0070671_1001748382 248
92 3300005355 Ga0070671_100187965 Ga0070671_1001879651 248
93 3300005364 Ga0070673_100129393 Ga0070673_1001293932 248
94 3300005366 Ga0070659_100003586 Ga0070659_10000358611 248
95 3300005458 Ga0070681_10049099 Ga0070681_100490994 248
96 3300005530 Ga0070679_100053015 Ga0070679_1000530154 248
97 3300005539 Ga0068853_100082734 Ga0068853_1000827343 248
98 3300005563 Ga0068855_100101329 Ga0068855_1001013293 248
99 3300005564 Ga0070664_100689752 Ga0070664_1006897521 248
100 3300005614 Ga0068856_100406624 Ga0068856_1004066242 248
101 3300005618 Ga0068864_100062778 Ga0068864_1000627783 248
102 3300006028 Ga0070717_10009511 Ga0070717_100095113 248
103 3300006358 Ga0068871_100179909 Ga0068871_1001799092 248
104 3300009093 Ga0105240_10017104 Ga0105240_100171048 248
105 3300009093 Ga0105240_10061173 Ga0105240_100611733 248
106 3300009176 Ga0105242_10336306 Ga0105242_103363061 248
107 3300009177 Ga0105248_10004774 Ga0105248_1000477413 248
108 3300010375 Ga0105239_10091421 Ga0105239_100914213 248
109 3300013307 Ga0157372_10017950 Ga0157372_100179503 248
110 3300014325 Ga0163163_10021250 Ga0163163_100212502 248
111 3300025913 Ga0207695_10001878 Ga0207695_1000187815 248
112 3300025913 Ga0207695_10013646 Ga0207695_100136462 248
113 3300025919 Ga0207657_10087718 Ga0207657_100877182 248
114 3300025931 Ga0207644_10191443 Ga0207644_101914432 248
115 3300025931 Ga0207644_10301035 Ga0207644_103010352 248
116 3300025932 Ga0207690_10000854 Ga0207690_100008545 248
117 3300025941 Ga0207711_10055492 Ga0207711_100554924 248
118 3300025960 Ga0207651_10169524 Ga0207651_101695242 248
119 3300026023 Ga0207677_10118306 Ga0207677_101183062 248
120 3300026041 Ga0207639_10033760 Ga0207639_100337604 248
121 3300026041 Ga0207639_10058428 Ga0207639_100584282 248
122 3300026078 Ga0207702_10595493 Ga0207702_105954931 248
123 3300026095 Ga0207676_10025133 Ga0207676_100251333 248
124 3300028800 Ga0265338_10019328 Ga0265338_100193284 248
125 3300028800 Ga0265338_10064819 Ga0265338_100648191 248
126 3300031250 Ga0265331_10000054 Ga0265331_10000054150 248
127 3300031250 Ga0265331_10025396 Ga0265331_100253962 248
128 3300031251 Ga0265327_10000179 Ga0265327_1000017974 248
129 3300032005 Ga0307411_10272619 Ga0307411_102726192 248
130 3300039437 Ga0436365_0506572 Ga0436365_0506572_50799_51572 248
131 3300046616 Ga0495668_0015057 Ga0495668_0015057_886_1641 248
132 3300047320 Ga0495672_0022228 Ga0495672_0022228_1374_2129 248
133 3300048907 Ga0496104_0125183 Ga0496104_0125183_409_1164 248
134 3300048912 Ga0496109_0098128 Ga0496109_0098128_551_1306 248
135 3300048915 Ga0496112_0040232 Ga0496112_0040232_1933_2688 248
136 3300048915 Ga0496112_0115471 Ga0496112_0115471_127_882 248
137 3300048918 Ga0496115_0003901 Ga0496115_0003901_8521_9276 248
138 3300049569 Ga0501032_0328864 Ga0501032_0328864_130_894 248
139 3300049581 Ga0501047_0095299 Ga0501047_0095299_1369_2181 248
140 3300049581 Ga0501047_0541718 Ga0501047_0541718_73_837 248
141 3300049823 Ga0501044_0192244 Ga0501044_0192244_1145_1909 248
142 3300003791 Ga0055530_10007478 Ga0055530_100074782 249
143 3300003794 Ga0055531_10007480 Ga0055531_100074805 249
144 3300003794 Ga0055531_10028042 Ga0055531_100280423 249
145 3300004625 Ga0055543_1011565 Ga0055543_10115652 249
146 3300005262 Ga0065165_1000528 Ga0065165_10005282 249
147 3300005336 Ga0070680_100011957 Ga0070680_1000119576 249
148 3300005458 Ga0070681_10070135 Ga0070681_100701352 249
149 3300005539 Ga0068853_100607547 Ga0068853_1006075471 249
150 3300005563 Ga0068855_100024909 Ga0068855_1000249092 249
151 3300005564 Ga0070664_100061488 Ga0070664_1000614883 249
152 3300005618 Ga0068864_100000108 Ga0068864_10000010872 249
153 3300005841 Ga0068863_100000037 Ga0068863_100000037111 249
154 3300005841 Ga0068863_100105862 Ga0068863_1001058622 249
155 3300005844 Ga0068862_100222350 Ga0068862_1002223503 249
156 3300005844 Ga0068862_100292992 Ga0068862_1002929922 249
157 3300009177 Ga0105248_10187129 Ga0105248_101871292 249
158 3300009551 Ga0105238_10283384 Ga0105238_102833842 249
159 3300014497 Ga0182008_10220390 Ga0182008_102203902 249
160 3300025250 Ga0209026_1003431 Ga0209026_10034313 249
161 3300025297 Ga0209758_1002695 Ga0209758_100269511 249
162 3300025298 Ga0209050_1000029 Ga0209050_1000029118 249
163 3300025304 Ga0209257_1000271 Ga0209257_10002712 249
164 3300025304 Ga0209257_1005827 Ga0209257_10058272 249
165 3300025912 Ga0207707_10049224 Ga0207707_100492242 249
166 3300025913 Ga0207695_10065544 Ga0207695_100655442 249
167 3300025917 Ga0207660_10140583 Ga0207660_101405832 249
168 3300025924 Ga0207694_10204334 Ga0207694_102043342 249
169 3300025931 Ga0207644_10474162 Ga0207644_104741622 249
170 3300025941 Ga0207711_10064738 Ga0207711_100647383 249
171 3300025945 Ga0207679_10049820 Ga0207679_100498203 249
172 3300025949 Ga0207667_10323670 Ga0207667_103236702 249
173 3300026088 Ga0207641_10000034 Ga0207641_1000003489 249
174 3300026088 Ga0207641_10076714 Ga0207641_100767142 249
175 3300026095 Ga0207676_10000506 Ga0207676_1000050616 249
176 3300027378 Ga0209981_1002969 Ga0209981_10029691 249
177 3300027665 Ga0209983_1008084 Ga0209983_10080842 249
178 3300028786 Ga0307517_10001819 Ga0307517_100018193 249
179 3300028786 Ga0307517_10090718 Ga0307517_100907183 249
180 3300030521 Ga0307511_10007876 Ga0307511_100078766 249
181 3300031456 Ga0307513_10036912 Ga0307513_100369122 249
182 3300031456 Ga0307513_10047339 Ga0307513_100473392 249
183 3300033180 Ga0307510_10072375 Ga0307510_100723755 249
184 3300035089 Ga0373944_0015116 Ga0373944_0015116_1346_2098 249
185 3300035695 Ga0373927_0005441 Ga0373927_0005441_5295_6047 249
186 3300037068 Ga0373925_0000067 Ga0373925_0000067_51764_52516 249
187 3300037312 Ga0395899_0227012 Ga0395899_0227012_348_1151 249
188 3300037418 Ga0395900_0055267 Ga0395900_0055267_2314_3117 249
189 3300037466 Ga0395898_0095626 Ga0395898_0095626_628_1431 249
190 3300037471 Ga0395905_0041641 Ga0395905_0041641_1820_2617 249
191 3300038443 Ga0395901_0012008 Ga0395901_0012008_6171_6974 249
192 3300046506 Ga0495583_0028778 Ga0495583_0028778_776_1534 249
193 3300046616 Ga0495668_0018371 Ga0495668_0018371_613_1437 249
194 3300046616 Ga0495668_0143885 Ga0495668_0143885_66_818 249
195 3300046660 Ga0495625_0065330 Ga0495625_0065330_1364_2116 249
196 3300046660 Ga0495625_0193883 Ga0495625_0193883_468_1226 249
197 3300046684 Ga0495669_0000864 Ga0495669_0000864_6735_7487 249
198 3300047469 Ga0495673_0000293 Ga0495673_0000293_50574_51356 249
199 3300047472 Ga0495686_0008998 Ga0495686_0008998_5711_6469 249
200 3300048915 Ga0496112_0162985 Ga0496112_0162985_679_1482 249
201 3300049571 Ga0501034_0015780 Ga0501034_0015780_1943_2728 249
202 3300049573 Ga0501037_0030308 Ga0501037_0030308_2215_3000 249
203 3300049574 Ga0501038_0021481 Ga0501038_0021481_4754_5539 249
204 3300049579 Ga0501043_0008623 Ga0501043_0008623_2414_3199 249
205 3300049580 Ga0501046_0007660 Ga0501046_0007660_3191_3976 249
206 3300049581 Ga0501047_0127906 Ga0501047_0127906_1459_2244 249
207 3300049583 Ga0501067_0004277 Ga0501067_0004277_57_842 249
208 3300049584 Ga0501068_0043118 Ga0501068_0043118_1284_2069 249
209 3300049589 Ga0501073_0006568 Ga0501073_0006568_5124_5909 249
210 3300049742 Ga0501080_0001485 Ga0501080_0001485_13891_14676 249
211 3300049744 Ga0501083_0050980 Ga0501083_0050980_259_1044 249
212 3300049822 Ga0501035_0038939 Ga0501035_0038939_312_1097 249
213 3300049823 Ga0501044_0006428 Ga0501044_0006428_7218_8003 249
214 3300053080 Ga0500635_0000085 Ga0500635_0000085_52333_53157 249
215 3300053088 Ga0500644_0000036 Ga0500644_0000036_29149_29922 249
216 3300053096 Ga0500641_0029924 Ga0500641_0029924_645_1403 249
217 3300053108 Ga0500562_001490 Ga0500562_001490_4656_5414 249
218 3300053119 Ga0500595_003683 Ga0500595_003683_5958_6737 249
219 3300053119 Ga0500595_020104 Ga0500595_020104_1312_2070 249
220 3300053162 Ga0500638_068818 Ga0500638_068818_305_1129 249
221 3300053177 Ga0500636_0005219 Ga0500636_0005219_3144_3968 249
222 3300053178 Ga0500637_0017333 Ga0500637_0017333_2763_3587 249
223 3300053730 Ga0500645_025603 Ga0500645_025603_866_1624 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

93

189

0.98

PF13649

Methyltransf_25

Methyltransferase domain

92

185

0.93

PF08242

Methyltransf_12

Methyltransferase domain

93

187

0.86

PF13847

Methyltransf_31

Methyltransferase domain

86

262

0.85

PF02353

CMAS

Mycolic acid cyclopropane synthetase

79

217

0.84

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

66

217

0.82

PF13489

Methyltransf_23

Methyltransferase domain

65

237

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kdr-assembly1.cif.gz_A crystal structure of ubig/sah complex 0.9311 7 244
5dpm-assembly1.cif.gz_A crystal structure of ubig mutant in complex with sah 0.9299 7 244
4kdr-assembly1.cif.gz_A crystal structure of ubig/sah complex 0.9097 7 244
5dpm-assembly1.cif.gz_A crystal structure of ubig mutant in complex with sah 0.9083 7 244
4kdc-assembly1.cif.gz_A crystal structure of ubig 0.8412 13 244
ID Description Score Start End Superfamily
af_Q0DEH4_83_317_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9702 13 245 3.40.50.150
af_A0A1D6FP65_72_359_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9651 7 246 3.40.50.150
af_Q0DEH4_83_317_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.958 13 245 3.40.50.150
af_Q54XD0_74_321_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.95 13 246 3.40.50.150
af_Q0DEH3_59_207_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9452 1 133 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A383ETB4-F1-model_v4 Methyltransferase type 11 domain-containing protein 0.9818 6 209 GO:0005739
GO:0010420
GO:0032259
GO:0061542
AF-A0A7W9CVT1-F1-model_v4 Ubiquinone biosynthesis O-methyltransferase (2-polyprenyl-6-hydroxyphenol methylase) (EC 2.1.1.222) (3-demethylubiquinone 3-O-methyltransferase) (EC 2.1.1.64) 0.9805 3 246 GO:0010420
GO:0032259
GO:0061542
GO:0102208
AF-A0A7V8QSE0-F1-model_v4 Ubiquinone biosynthesis O-methyltransferase (2-polyprenyl-6-hydroxyphenol methylase) (EC 2.1.1.222) (3-demethylubiquinone 3-O-methyltransferase) (EC 2.1.1.64) 0.9799 7 247 GO:0010420
GO:0032259
GO:0061542
AF-A0A3N1LXY4-F1-model_v4 Ubiquinone biosynthesis O-methyltransferase (2-polyprenyl-6-hydroxyphenol methylase) (EC 2.1.1.222) (3-demethylubiquinone 3-O-methyltransferase) (EC 2.1.1.64) 0.9794 3 249 GO:0010420
GO:0032259
GO:0061542
GO:0102208
AF-A0A1Q3P785-F1-model_v4 Ubiquinone biosynthesis O-methyltransferase (2-polyprenyl-6-hydroxyphenol methylase) (EC 2.1.1.222) (3-demethylubiquinone 3-O-methyltransferase) (EC 2.1.1.64) 0.9792 6 246 GO:0010420
GO:0032259
GO:0061542
GO:0102208

Feature Viewer

pLDDT pTM Quality
88.78 0.87 High
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Predicted Structure (AlphaFold2)

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