F334924

General Info

Members Datasets Scaffolds Average Seq Length
222 159 218 300

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0047871|Ga0501031_0047871_1850_2752
Length 300
Sequence VINIGFIGLGIMGKPMAGHLIRGGYQLFLHSRSGVPEELIKQGGKACSSPREVAQHAEIIFLMLPDAPDVEKVLFGDNGVVDGLDVNPAKKTIVDMSSISPIETKKFAIRISQLGYDYADAPVSGGDVGAKNAALTIMVGATISVFEKIKPLLSLMGQTITLIGANGAGQICKTANQIVVALTIEAVGEALLFASKAGADPAKVRQALMGGFASSRVLEVHGNRMIKRLFDPGFRVELQQKDLNIALSCASDLGISLPNTAATQSLYNACIAHGGATWDNSAIVRILEKLANYEITDINA

Samples

Sample ID Description Type Environment
1 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
2 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
3 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
4 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
5 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
40 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
56 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
91 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
92 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
106 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
107 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
110 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
111 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
112 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
116 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
117 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
118 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
126 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
148 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
149 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
156 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.75
Metatranscriptomes 0
Isolates 2.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.16
Nodule 1.35
Rhizoplane 4.05
Rhizosphere 78.83
Stem 0
Stem Tuber 0
Unclassified 3.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10002836 3300003187 Bacteria 9990
2 rootH1_10010855 3300003316 Bacteria 76739
3 rootH1_10010855 3300003323 Bacteria 16450
4 Ga0055526_1002556 3300003771 Bacteria 12210
5 Ga0055524_1000033 3300003775 Bacteria 180833
6 Ga0055536_1000075 3300003781 Bacteria 84621
7 Ga0055534_1000359 3300003784 Bacteria 28902
8 Ga0055534_1009472 3300003784 Bacteria 2113
9 Ga0055530_10002584 3300003791 Bacteria 11480
10 Ga0055540_1000007 3300003792 Bacteria 318178
11 Ga0055531_10001534 3300003794 Bacteria 16915
12 Ga0055531_10004143 3300003794 Bacteria 8953
13 Ga0065707_10092415 3300005295 Bacteria 3775
14 Ga0070658_10004531 3300005327 Bacteria 11295
15 Ga0070670_100101357 3300005331 Bacteria 2479
16 Ga0070660_100220363 3300005339 Bacteria 1542
17 Ga0070661_100008387 3300005344 Bacteria 7140
18 Ga0070668_100067223 3300005347 Bacteria 2784
19 Ga0070669_100000324 3300005353 Bacteria 37381
20 Ga0070675_100336085 3300005354 Bacteria 1337
21 Ga0070659_100223490 3300005366 Bacteria 1555
22 Ga0070667_100117168 3300005367 Bacteria 2314
23 Ga0070679_100035061 3300005530 Bacteria 4977
24 Ga0068853_100270651 3300005539 Bacteria 1564
25 Ga0070695_100496578 3300005545 Bacteria 943
26 Ga0068855_100477872 3300005563 Bacteria 1357
27 Ga0070664_100088719 3300005564 Bacteria 2674
28 Ga0068856_100065069 3300005614 Bacteria 3602
29 Ga0068856_100090560 3300005614 Bacteria 3042
30 Ga0068852_100150831 3300005616 Bacteria 2161
31 Ga0068859_100021106 3300005617 Bacteria 6536
32 Ga0068858_100002160 3300005842 Bacteria 19946
33 Ga0068860_100236287 3300005843 Bacteria 1777
34 Ga0097621_100074401 3300006237 Bacteria 2814
35 Ga0075434_100502836 3300006871 Bacteria 1233
36 Ga0068865_100133901 3300006881 Bacteria 1860
37 Ga0097620_100021106 3300006931 Bacteria 6536
38 Ga0099823_1000049 3300006944 Bacteria 58213
39 Ga0105250_10000036 3300009092 Bacteria 147009
40 Ga0105240_10015252 3300009093 Bacteria 10454
41 Ga0111539_10031708 3300009094 Bacteria 6420
42 Ga0105245_10142105 3300009098 Bacteria 2262
43 Ga0105241_10038541 3300009174 Bacteria 3603
44 Ga0105248_10008002 3300009177 Bacteria 11612
45 Ga0105248_10038454 3300009177 Bacteria 5354
46 Ga0105248_10359512 3300009177 Bacteria 1639
47 Ga0105239_10419890 3300010375 Bacteria 1515
48 Ga0105239_10743628 3300010375 Bacteria 1122
49 Ga0157371_10311055 3300013102 Bacteria 1142
50 Ga0157371_10337775 3300013102 Bacteria 1095
51 Ga0157370_10006149 3300013104 Bacteria 13321
52 Ga0157370_10012022 3300013104 Bacteria 9016
53 Ga0157369_10017875 3300013105 Bacteria 7960
54 Ga0157378_10039698 3300013297 Bacteria 4175
55 Ga0157375_10068487 3300013308 Bacteria 3551
56 Ga0157375_10282105 3300013308 Bacteria 1824
57 Ga0163163_10184075 3300014325 Bacteria 2136
58 Ga0163163_10191986 3300014325 Bacteria 2091
59 Ga0163163_10196289 3300014325 Bacteria 2066
60 Ga0157379_10000193 3300014968 Bacteria 47012
61 Ga0157379_10127762 3300014968 Bacteria 2287
62 Ga0157376_10033117 3300014969 Bacteria 4156
63 Ga0157376_10364484 3300014969 Bacteria 1387
64 Ga0213876_10016021 3300021384 Bacteria 3965
65 Ga0209673_1015800 3300025273 Bacteria 2849
66 Ga0209675_1000040 3300025291 Bacteria 247535
67 Ga0209675_1026253 3300025291 Bacteria 1453
68 Ga0209676_1000014 3300025292 Bacteria 793514
69 Ga0209025_1000092 3300025294 Bacteria 247020
70 Ga0209564_1000159 3300025295 Bacteria 164319
71 Ga0209564_1000218 3300025295 Bacteria 130563
72 Ga0209050_1000243 3300025298 Bacteria 117715
73 Ga0209050_1005795 3300025298 Bacteria 7597
74 Ga0209256_1000019 3300025299 Bacteria 558627
75 Ga0209256_1000512 3300025299 Bacteria 56957
76 Ga0209051_1000004 3300025303 Bacteria 1155596
77 Ga0209051_1000577 3300025303 Bacteria 44159
78 Ga0209257_1000038 3300025304 Bacteria 609032
79 Ga0209257_1000044 3300025304 Bacteria 486709
80 Ga0209257_1003863 3300025304 Bacteria 12246
81 Ga0207696_1000135 3300025711 Bacteria 129665
82 Ga0207710_10084332 3300025900 Bacteria 1478
83 Ga0207705_10027616 3300025909 Bacteria 4047
84 Ga0207654_10101590 3300025911 Bacteria 1773
85 Ga0207695_10030261 3300025913 Bacteria 5963
86 Ga0207693_10307374 3300025915 Unclassified 1242
87 Ga0207652_10042841 3300025921 Bacteria 3854
88 Ga0207681_10000253 3300025923 Bacteria 40735
89 Ga0207687_10001757 3300025927 Bacteria 14889
90 Ga0207669_10153607 3300025937 Bacteria 1616
91 Ga0207711_10017757 3300025941 Bacteria 5910
92 Ga0207689_10070413 3300025942 Bacteria 2873
93 Ga0207679_10068293 3300025945 Bacteria 2670
94 Ga0207667_10005488 3300025949 Bacteria 15463
95 Ga0207668_10031953 3300025972 Bacteria 3473
96 Ga0207658_10063195 3300025986 Bacteria 2774
97 Ga0207703_10024275 3300026035 Bacteria 4770
98 Ga0207639_10429281 3300026041 Bacteria 1196
99 Ga0207702_10042945 3300026078 Bacteria 3794
100 Ga0207702_10052916 3300026078 Bacteria 3437
101 Ga0207702_10473362 3300026078 Unclassified 1218
102 Ga0207641_10047096 3300026088 Bacteria 3635
103 Ga0207648_10065487 3300026089 Bacteria 3168
104 Ga0207675_100065093 3300026118 Bacteria 3407
105 Ga0207675_100331171 3300026118 Bacteria 1488
106 Ga0207698_10029860 3300026142 Bacteria 3911
107 Ga0207428_10016064 3300027907 Bacteria 6451
108 Ga0207428_10019361 3300027907 Bacteria 5804
109 Ga0307513_10362903 3300031456 Bacteria 1193
110 Ga0265314_10050689 3300031711 Bacteria 2895
111 Ga0307516_10011247 3300031730 Bacteria 9754
112 Ga0307406_10194953 3300031901 Bacteria 1486
113 Ga0307414_10205959 3300032004 Bacteria 1604
114 Ga0395899_0000054 3300037312 Bacteria 220952
115 Ga0395900_0000220 3300037418 Bacteria 90109
116 Ga0395900_0047463 3300037418 Bacteria 4422
117 Ga0395898_0000510 3300037466 Bacteria 75287
118 Ga0395905_0174152 3300037471 Bacteria 2020
119 Ga0395901_0143469 3300038443 Bacteria 2510
120 Ga0395901_0243513 3300038443 Bacteria 1875
121 Ga0436365_1491795 3300039437 Bacteria 11364
122 Ga0439460_0033651 3300042461 Bacteria 1473
123 Ga0466959_0263878 3300045049 Bacteria 1185
124 Ga0495603_0036621 3300046455 Bacteria 2946
125 Ga0495638_0002078 3300046460 Bacteria 17000
126 Ga0495580_0049210 3300046472 Bacteria 2982
127 Ga0495605_0010231 3300046474 Bacteria 5252
128 Ga0495585_0011798 3300046492 Bacteria 5161
129 Ga0495607_0033828 3300046501 Bacteria 3107
130 Ga0495606_0174244 3300046507 Bacteria 1245
131 Ga0495644_0019571 3300046523 Bacteria 2584
132 Ga0495648_0088567 3300046524 Bacteria 1740
133 Ga0495666_0062688 3300046526 Bacteria 1776
134 Ga0495665_0131411 3300046531 Bacteria 1310
135 Ga0495586_0055629 3300046535 Bacteria 2144
136 Ga0495658_0180840 3300046683 Bacteria 1308
137 Ga0495669_0003771 3300046684 Bacteria 6230
138 Ga0495589_0006081 3300046794 Bacteria 6377
139 Ga0495660_0060565 3300046810 Bacteria 2033
140 Ga0495604_0018117 3300047317 Bacteria 5637
141 Ga0495674_0095629 3300047319 Bacteria 2533
142 Ga0495685_017204 3300047447 Bacteria 2475
143 Ga0496100_0010787 3300048903 Bacteria 5184
144 Ga0496102_0060633 3300048905 Bacteria 3460
145 Ga0496104_0336966 3300048907 Bacteria 1421
146 Ga0496106_0081244 3300048909 Bacteria 2490
147 Ga0496110_0060323 3300048913 Bacteria 3345
148 Ga0496111_0103279 3300048914 Bacteria 2096
149 Ga0496112_0313021 3300048915 Bacteria 1515
150 Ga0496114_0001104 3300048917 Bacteria 20372
151 Ga0496114_0062473 3300048917 Bacteria 3116
152 Ga0501031_0007444 3300049568 Bacteria 7132
153 Ga0501031_0047871 3300049568 Bacteria 2787
154 Ga0501032_0000146 3300049569 Bacteria 57593
155 Ga0501032_0003171 3300049569 Bacteria 12656
156 Ga0501032_0012758 3300049569 Bacteria 5992
157 Ga0501033_0002661 3300049570 Bacteria 15004
158 Ga0501033_0007167 3300049570 Bacteria 8699
159 Ga0501033_0027566 3300049570 Bacteria 4271
160 Ga0501034_0035314 3300049571 Bacteria 5068
161 Ga0501036_0031722 3300049572 Bacteria 4464
162 Ga0501036_0040073 3300049572 Bacteria 3962
163 Ga0501036_0052928 3300049572 Bacteria 3438
164 Ga0501036_0296198 3300049572 Bacteria 1353
165 Ga0501037_0002027 3300049573 Bacteria 14667
166 Ga0501037_0211230 3300049573 Bacteria 1368
167 Ga0501038_0001013 3300049574 Bacteria 25267
168 Ga0501038_0005808 3300049574 Bacteria 11426
169 Ga0501038_0007948 3300049574 Bacteria 9773
170 Ga0501039_0001250 3300049575 Bacteria 18554
171 Ga0501039_0008721 3300049575 Bacteria 7720
172 Ga0501040_0075866 3300049576 Bacteria 2324
173 Ga0501041_0012113 3300049577 Bacteria 5106
174 Ga0501041_0280108 3300049577 Bacteria 1049
175 Ga0501042_0000049 3300049578 Bacteria 40765
176 Ga0501042_0166446 3300049578 Bacteria 1591
177 Ga0501042_0276710 3300049578 Bacteria 1212
178 Ga0501043_0006024 3300049579 Bacteria 9746
179 Ga0501043_0012306 3300049579 Bacteria 6688
180 Ga0501046_0004814 3300049580 Bacteria 12170
181 Ga0501046_0105922 3300049580 Bacteria 2153
182 Ga0501046_0299733 3300049580 Bacteria 1174
183 Ga0501047_0000479 3300049581 Bacteria 43519
184 Ga0501047_0018754 3300049581 Bacteria 6634
185 Ga0501047_0190809 3300049581 Bacteria 1912
186 Ga0501048_0007371 3300049582 Bacteria 8334
187 Ga0501048_0206778 3300049582 Bacteria 1392
188 Ga0501068_0001003 3300049584 Bacteria 14864
189 Ga0501068_0037557 3300049584 Bacteria 2899
190 Ga0501070_0052466 3300049586 Bacteria 3385
191 Ga0501071_0049065 3300049587 Bacteria 3038
192 Ga0501075_0024665 3300049591 Bacteria 4414
193 Ga0501076_0000214 3300049592 Bacteria 35092
194 Ga0501076_0080445 3300049592 Bacteria 2616
195 Ga0501079_0004806 3300049741 Bacteria 10012
196 Ga0501079_0116477 3300049741 Bacteria 2077
197 Ga0501080_0060592 3300049742 Bacteria 3523
198 Ga0501081_0001801 3300049743 Bacteria 13288
199 Ga0501035_0006136 3300049822 Bacteria 11314
200 Ga0501035_0008208 3300049822 Bacteria 9732
201 Ga0501035_0010244 3300049822 Bacteria 8697
202 Ga0501035_0246923 3300049822 Bacteria 1517
203 Ga0501044_0001686 3300049823 Bacteria 25935
204 Ga0501044_0009515 3300049823 Bacteria 10579
205 Ga0501044_0024183 3300049823 Bacteria 6454
206 Ga0501044_0038723 3300049823 Bacteria 4978
207 Ga0501044_0169224 3300049823 Bacteria 2157
208 Ga0501044_0548641 3300049823 Bacteria 1053
209 Ga0501045_0000479 3300049824 Bacteria 24744
210 Ga0501045_0010406 3300049824 Bacteria 6515
211 Ga0501045_0122125 3300049824 Bacteria 1934
212 Ga0501045_0257572 3300049824 Bacteria 1298
213 nmdc:mga08y16_23749_c1 3300050511 Bacteria 6473
214 nmdc:mga08y16_39555_c1 3300050511 Bacteria 4948
215 Ga0500641_0010156 3300053096 Bacteria 3396
216 Ga0501084_0022956 3300054114 Bacteria 5207
217 Ga0501082_0002115 3300060353 Bacteria 17495
218 Ga0530510_0009639 3300061734 Bacteria 6775

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300026118 Ga0207675_100331171 Ga0207675_1003311711 283
2 3300031901 Ga0307406_10194953 Ga0307406_101949532 286
3 3300005327 Ga0070658_10004531 Ga0070658_100045312 288
4 3300005344 Ga0070661_100008387 Ga0070661_1000083875 288
5 3300005614 Ga0068856_100090560 Ga0068856_1000905602 288
6 3300005616 Ga0068852_100150831 Ga0068852_1001508312 288
7 3300009093 Ga0105240_10015252 Ga0105240_100152522 288
8 3300013104 Ga0157370_10012022 Ga0157370_100120227 288
9 3300013105 Ga0157369_10017875 Ga0157369_100178756 288
10 3300025909 Ga0207705_10027616 Ga0207705_100276162 288
11 3300025913 Ga0207695_10030261 Ga0207695_100302612 288
12 3300025949 Ga0207667_10005488 Ga0207667_100054889 288
13 3300026041 Ga0207639_10429281 Ga0207639_104292811 288
14 3300026078 Ga0207702_10042945 Ga0207702_100429452 288
15 3300026142 Ga0207698_10029860 Ga0207698_100298603 288
16 3300046531 Ga0495665_0131411 Ga0495665_0131411_18_884 288
17 iso_pu_bacteria 2828305725 2828308110 288
18 iso_pu_bacteria 2871451962 2871455332 289
19 3300013102 Ga0157371_10311055 Ga0157371_103110551 290
20 3300031456 Ga0307513_10362903 Ga0307513_103629031 290
21 3300013308 Ga0157375_10068487 Ga0157375_100684872 291
22 3300026088 Ga0207641_10047096 Ga0207641_100470964 291
23 3300049570 Ga0501033_0027566 Ga0501033_0027566_1973_2869 291
24 3300049581 Ga0501047_0000479 Ga0501047_0000479_9378_10274 291
25 3300049822 Ga0501035_0006136 Ga0501035_0006136_2240_3136 291
26 3300049823 Ga0501044_0038723 Ga0501044_0038723_1194_2090 291
27 3300025927 Ga0207687_10001757 Ga0207687_1000175713 292
28 3300049576 Ga0501040_0075866 Ga0501040_0075866_1229_2110 292
29 3300049577 Ga0501041_0280108 Ga0501041_0280108_146_1027 292
30 3300049578 Ga0501042_0166446 Ga0501042_0166446_343_1224 292
31 3300049592 Ga0501076_0080445 Ga0501076_0080445_582_1463 292
32 3300049822 Ga0501035_0246923 Ga0501035_0246923_261_1142 292
33 3300049824 Ga0501045_0122125 Ga0501045_0122125_814_1695 292
34 3300005331 Ga0070670_100101357 Ga0070670_1001013573 293
35 3300013297 Ga0157378_10039698 Ga0157378_100396983 293
36 3300031730 Ga0307516_10011247 Ga0307516_100112476 293
37 3300037471 Ga0395905_0174152 Ga0395905_0174152_775_1659 293
38 iso_pu_bacteria 2904615490 2904616747 293
39 3300005354 Ga0070675_100336085 Ga0070675_1003360852 294
40 3300005367 Ga0070667_100117168 Ga0070667_1001171682 294
41 3300005530 Ga0070679_100035061 Ga0070679_1000350611 294
42 3300005545 Ga0070695_100496578 Ga0070695_1004965781 294
43 3300005563 Ga0068855_100477872 Ga0068855_1004778721 294
44 3300005617 Ga0068859_100021106 Ga0068859_1000211065 294
45 3300005843 Ga0068860_100236287 Ga0068860_1002362871 294
46 3300006237 Ga0097621_100074401 Ga0097621_1000744013 294
47 3300006871 Ga0075434_100502836 Ga0075434_1005028361 294
48 3300006881 Ga0068865_100133901 Ga0068865_1001339012 294
49 3300006931 Ga0097620_100021106 Ga0097620_1000211065 294
50 3300009098 Ga0105245_10142105 Ga0105245_101421052 294
51 3300009174 Ga0105241_10038541 Ga0105241_100385412 294
52 3300009177 Ga0105248_10008002 Ga0105248_100080029 294
53 3300010375 Ga0105239_10419890 Ga0105239_104198901 294
54 3300010375 Ga0105239_10743628 Ga0105239_107436281 294
55 3300013102 Ga0157371_10337775 Ga0157371_103377751 294
56 3300014325 Ga0163163_10191986 Ga0163163_101919862 294
57 3300014325 Ga0163163_10196289 Ga0163163_101962892 294
58 3300014968 Ga0157379_10127762 Ga0157379_101277622 294
59 3300014969 Ga0157376_10033117 Ga0157376_100331172 294
60 3300014969 Ga0157376_10364484 Ga0157376_103644842 294
61 3300025911 Ga0207654_10101590 Ga0207654_101015902 294
62 3300025921 Ga0207652_10042841 Ga0207652_100428413 294
63 3300025937 Ga0207669_10153607 Ga0207669_101536071 294
64 3300025942 Ga0207689_10070413 Ga0207689_100704133 294
65 3300026035 Ga0207703_10024275 Ga0207703_100242754 294
66 3300026089 Ga0207648_10065487 Ga0207648_100654873 294
67 3300026118 Ga0207675_100065093 Ga0207675_1000650933 294
68 3300027907 Ga0207428_10019361 Ga0207428_100193615 294
69 3300031711 Ga0265314_10050689 Ga0265314_100506892 294
70 3300045049 Ga0466959_0263878 Ga0466959_0263878_159_1043 294
71 3300046535 Ga0495586_0055629 Ga0495586_0055629_118_1005 294
72 3300046683 Ga0495658_0180840 Ga0495658_0180840_389_1276 294
73 3300047319 Ga0495674_0095629 Ga0495674_0095629_1182_2069 294
74 3300048913 Ga0496110_0060323 Ga0496110_0060323_589_1605 294
75 3300048917 Ga0496114_0062473 Ga0496114_0062473_321_1337 294
76 3300050511 nmdc:mga08y16_39555_c1 nmdc:mga08y16_39555_c1_3389_4405 294
77 iso_pu_bacteria 2834641062 2834644026 294
78 iso_pu_bacteria 2842333319 2842338536 294
79 3300005295 Ga0065707_10092415 Ga0065707_100924152 295
80 3300009092 Ga0105250_10000036 Ga0105250_1000003614 295
81 3300014968 Ga0157379_10000193 Ga0157379_1000019338 295
82 3300025711 Ga0207696_1000135 Ga0207696_1000135113 295
83 3300038443 Ga0395901_0243513 Ga0395901_0243513_681_1577 295
84 3300042461 Ga0439460_0033651 Ga0439460_0033651_498_1397 295
85 3300049577 Ga0501041_0012113 Ga0501041_0012113_1864_2751 295
86 3300049578 Ga0501042_0276710 Ga0501042_0276710_219_1106 295
87 3300049580 Ga0501046_0105922 Ga0501046_0105922_1016_1903 295
88 3300049582 Ga0501048_0206778 Ga0501048_0206778_220_1107 295
89 3300049584 Ga0501068_0037557 Ga0501068_0037557_910_1797 295
90 3300049587 Ga0501071_0049065 Ga0501071_0049065_898_1785 295
91 3300049591 Ga0501075_0024665 Ga0501075_0024665_1773_2660 295
92 3300049592 Ga0501076_0000214 Ga0501076_0000214_20017_20904 295
93 3300049741 Ga0501079_0004806 Ga0501079_0004806_6673_7560 295
94 3300049741 Ga0501079_0116477 Ga0501079_0116477_203_1090 295
95 3300049742 Ga0501080_0060592 Ga0501080_0060592_2426_3313 295
96 3300049743 Ga0501081_0001801 Ga0501081_0001801_5298_6185 295
97 3300049824 Ga0501045_0010406 Ga0501045_0010406_4220_5107 295
98 3300049824 Ga0501045_0257572 Ga0501045_0257572_166_1053 295
99 3300053096 Ga0500641_0010156 Ga0500641_0010156_552_1439 295
100 3300054114 Ga0501084_0022956 Ga0501084_0022956_1632_2519 295
101 3300060353 Ga0501082_0002115 Ga0501082_0002115_2775_3662 295
102 3300061734 Ga0530510_0009639 Ga0530510_0009639_4262_5149 295
103 3300021384 Ga0213876_10016021 Ga0213876_100160213 296
104 3300039437 Ga0436365_1491795 Ga0436365_1491795_8535_9425 296
105 3300003775 Ga0055524_1000033 Ga0055524_100003320 297
106 3300003791 Ga0055530_10002584 Ga0055530_100025845 297
107 3300003792 Ga0055540_1000007 Ga0055540_100000744 297
108 3300003794 Ga0055531_10004143 Ga0055531_100041436 297
109 3300005564 Ga0070664_100088719 Ga0070664_1000887192 297
110 3300014325 Ga0163163_10184075 Ga0163163_101840751 297
111 3300025291 Ga0209675_1026253 Ga0209675_10262531 297
112 3300025298 Ga0209050_1000243 Ga0209050_10002438 297
113 3300025299 Ga0209256_1000019 Ga0209256_1000019297 297
114 3300025303 Ga0209051_1000004 Ga0209051_100000497 297
115 3300025304 Ga0209257_1000038 Ga0209257_1000038231 297
116 3300025304 Ga0209257_1000044 Ga0209257_1000044329 297
117 3300025900 Ga0207710_10084332 Ga0207710_100843321 297
118 3300025945 Ga0207679_10068293 Ga0207679_100682932 297
119 3300046455 Ga0495603_0036621 Ga0495603_0036621_1146_2108 297
120 3300046460 Ga0495638_0002078 Ga0495638_0002078_1018_1980 297
121 3300046474 Ga0495605_0010231 Ga0495605_0010231_3081_4043 297
122 3300046492 Ga0495585_0011798 Ga0495585_0011798_2536_3498 297
123 3300046501 Ga0495607_0033828 Ga0495607_0033828_1434_2396 297
124 3300046507 Ga0495606_0174244 Ga0495606_0174244_169_1131 297
125 3300046523 Ga0495644_0019571 Ga0495644_0019571_758_1720 297
126 3300046524 Ga0495648_0088567 Ga0495648_0088567_307_1269 297
127 3300046684 Ga0495669_0003771 Ga0495669_0003771_952_1914 297
128 3300046794 Ga0495589_0006081 Ga0495589_0006081_4373_5335 297
129 3300046810 Ga0495660_0060565 Ga0495660_0060565_951_1913 297
130 3300047447 Ga0495685_017204 Ga0495685_017204_934_1896 297
131 3300048903 Ga0496100_0010787 Ga0496100_0010787_3085_4047 297
132 3300048905 Ga0496102_0060633 Ga0496102_0060633_1471_2433 297
133 3300048907 Ga0496104_0336966 Ga0496104_0336966_413_1375 297
134 3300048909 Ga0496106_0081244 Ga0496106_0081244_136_1098 297
135 3300048917 Ga0496114_0001104 Ga0496114_0001104_13495_14388 297
136 3300049568 Ga0501031_0047871 Ga0501031_0047871_1850_2752 297
137 3300049569 Ga0501032_0003171 Ga0501032_0003171_10988_11890 297
138 3300049571 Ga0501034_0035314 Ga0501034_0035314_3200_4102 297
139 3300049572 Ga0501036_0040073 Ga0501036_0040073_2557_3450 297
140 3300049574 Ga0501038_0007948 Ga0501038_0007948_3334_4236 297
141 3300049575 Ga0501039_0008721 Ga0501039_0008721_4919_5821 297
142 3300049580 Ga0501046_0299733 Ga0501046_0299733_233_1135 297
143 3300049823 Ga0501044_0169224 Ga0501044_0169224_468_1361 297
144 3300049823 Ga0501044_0548641 Ga0501044_0548641_89_994 297
145 3300005614 Ga0068856_100065069 Ga0068856_1000650693 298
146 3300005842 Ga0068858_100002160 Ga0068858_1000021608 298
147 3300009177 Ga0105248_10359512 Ga0105248_103595122 298
148 3300013308 Ga0157375_10282105 Ga0157375_102821051 298
149 3300025986 Ga0207658_10063195 Ga0207658_100631952 298
150 3300026078 Ga0207702_10052916 Ga0207702_100529162 298
151 3300037312 Ga0395899_0000054 Ga0395899_0000054_12737_13633 298
152 3300037418 Ga0395900_0000220 Ga0395900_0000220_76477_77373 298
153 3300037466 Ga0395898_0000510 Ga0395898_0000510_12737_13633 298
154 3300003187 JGI25151J46595_10002836 JGI25151J46595_1000283610 299
155 3300003323 rootH1_10010855 rootH1_100108554 299
156 3300003771 Ga0055526_1002556 Ga0055526_100255611 299
157 3300003781 Ga0055536_1000075 Ga0055536_100007555 299
158 3300003784 Ga0055534_1000359 Ga0055534_100035932 299
159 3300003784 Ga0055534_1009472 Ga0055534_10094722 299
160 3300003794 Ga0055531_10001534 Ga0055531_1000153411 299
161 3300005339 Ga0070660_100220363 Ga0070660_1002203631 299
162 3300005347 Ga0070668_100067223 Ga0070668_1000672232 299
163 3300005353 Ga0070669_100000324 Ga0070669_10000032418 299
164 3300005366 Ga0070659_100223490 Ga0070659_1002234902 299
165 3300005539 Ga0068853_100270651 Ga0068853_1002706511 299
166 3300006944 Ga0099823_1000049 Ga0099823_10000496 299
167 3300009094 Ga0111539_10031708 Ga0111539_100317085 299
168 3300009177 Ga0105248_10038454 Ga0105248_100384544 299
169 3300013104 Ga0157370_10006149 Ga0157370_100061499 299
170 3300025273 Ga0209673_1015800 Ga0209673_10158002 299
171 3300025291 Ga0209675_1000040 Ga0209675_100004058 299
172 3300025292 Ga0209676_1000014 Ga0209676_1000014596 299
173 3300025294 Ga0209025_1000092 Ga0209025_100009258 299
174 3300025295 Ga0209564_1000159 Ga0209564_100015988 299
175 3300025295 Ga0209564_1000218 Ga0209564_100021851 299
176 3300025298 Ga0209050_1005795 Ga0209050_10057952 299
177 3300025299 Ga0209256_1000512 Ga0209256_10005127 299
178 3300025303 Ga0209051_1000577 Ga0209051_100057728 299
179 3300025304 Ga0209257_1003863 Ga0209257_10038636 299
180 3300025915 Ga0207693_10307374 Ga0207693_103073741 299
181 3300025923 Ga0207681_10000253 Ga0207681_1000025318 299
182 3300025941 Ga0207711_10017757 Ga0207711_100177574 299
183 3300025972 Ga0207668_10031953 Ga0207668_100319532 299
184 3300026078 Ga0207702_10473362 Ga0207702_104733622 299
185 3300027907 Ga0207428_10016064 Ga0207428_100160645 299
186 3300032004 Ga0307414_10205959 Ga0307414_102059591 299
187 3300037418 Ga0395900_0047463 Ga0395900_0047463_1947_2906 299
188 3300038443 Ga0395901_0143469 Ga0395901_0143469_555_1514 299
189 3300046472 Ga0495580_0049210 Ga0495580_0049210_459_1358 299
190 3300046526 Ga0495666_0062688 Ga0495666_0062688_516_1415 299
191 3300047317 Ga0495604_0018117 Ga0495604_0018117_3135_4034 299
192 3300048914 Ga0496111_0103279 Ga0496111_0103279_284_1192 299
193 3300048915 Ga0496112_0313021 Ga0496112_0313021_237_1145 299
194 3300049568 Ga0501031_0007444 Ga0501031_0007444_5739_6641 299
195 3300049569 Ga0501032_0000146 Ga0501032_0000146_49937_50839 299
196 3300049569 Ga0501032_0012758 Ga0501032_0012758_4784_5686 299
197 3300049570 Ga0501033_0002661 Ga0501033_0002661_6775_7677 299
198 3300049570 Ga0501033_0007167 Ga0501033_0007167_6755_7657 299
199 3300049572 Ga0501036_0031722 Ga0501036_0031722_2066_2968 299
200 3300049572 Ga0501036_0052928 Ga0501036_0052928_953_1855 299
201 3300049572 Ga0501036_0296198 Ga0501036_0296198_250_1152 299
202 3300049573 Ga0501037_0002027 Ga0501037_0002027_6755_7657 299
203 3300049573 Ga0501037_0211230 Ga0501037_0211230_156_1103 299
204 3300049574 Ga0501038_0001013 Ga0501038_0001013_6508_7410 299
205 3300049574 Ga0501038_0005808 Ga0501038_0005808_5287_6189 299
206 3300049575 Ga0501039_0001250 Ga0501039_0001250_10898_11800 299
207 3300049578 Ga0501042_0000049 Ga0501042_0000049_37799_38701 299
208 3300049579 Ga0501043_0006024 Ga0501043_0006024_6755_7657 299
209 3300049579 Ga0501043_0012306 Ga0501043_0012306_4115_5017 299
210 3300049580 Ga0501046_0004814 Ga0501046_0004814_6755_7657 299
211 3300049581 Ga0501047_0018754 Ga0501047_0018754_3343_4245 299
212 3300049581 Ga0501047_0190809 Ga0501047_0190809_96_998 299
213 3300049582 Ga0501048_0007371 Ga0501048_0007371_6755_7657 299
214 3300049584 Ga0501068_0001003 Ga0501068_0001003_9328_10230 299
215 3300049586 Ga0501070_0052466 Ga0501070_0052466_388_1290 299
216 3300049822 Ga0501035_0008208 Ga0501035_0008208_1885_2787 299
217 3300049822 Ga0501035_0010244 Ga0501035_0010244_6724_7626 299
218 3300049823 Ga0501044_0001686 Ga0501044_0001686_18279_19181 299
219 3300049823 Ga0501044_0009515 Ga0501044_0009515_2686_3588 299
220 3300049823 Ga0501044_0024183 Ga0501044_0024183_626_1528 299
221 3300049824 Ga0501045_0000479 Ga0501045_0000479_18155_19057 299
222 3300050511 nmdc:mga08y16_23749_c1 nmdc:mga08y16_23749_c1_2089_3171 299

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14833

NAD_binding_11

NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase

167

287

0.97

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

3

164

0.96

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

3

97

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yb4-assembly1.cif.gz_A crystal structure of the tartronic semialdehyde reductase from salmonella typhimurium lt2 0.9582 3 291
2gf2-assembly1.cif.gz_A crystal structure of human hydroxyisobutyrate dehydrogenase 0.9543 3 284
1yb4-assembly1.cif.gz_A crystal structure of the tartronic semialdehyde reductase from salmonella typhimurium lt2 0.9486 3 291
3pdu-assembly1.cif.gz_D crystal structure of gamma-hydroxybutyrate dehydrogenase from geobacter sulfurreducens in complex with nadp+ 0.9473 1 284
4dll-assembly1.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.946 3 288
ID Description Score Start End Superfamily
af_P77161_159_292_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9971 160 292 1.10.1040.10
1yb4B02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9885 160 290 1.10.1040.10
af_A0A1D6NCX6_182_311_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9835 164 291 1.10.1040.10
af_P77161_159_292_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9823 160 292 1.10.1040.10
1yb4B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9819 4 159 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A352S2Q2-F1-model_v4 2-hydroxy-3-oxopropionate reductase 1.006 69 158 GO:0050661
AF-A0A529ZR79-F1-model_v4 2-hydroxy-3-oxopropionate reductase 0.998 134 292 GO:0016054
GO:0050661
GO:0051287
AF-A0A537NB56-F1-model_v4 2-hydroxy-3-oxopropionate reductase 0.997 1 227 GO:0016054
GO:0016491
GO:0050661
GO:0051287
AF-A0A844EW81-F1-model_v4 deleted 0.996 143 292
AF-A0A352S2Q2-F1-model_v4 2-hydroxy-3-oxopropionate reductase 0.9947 69 158 GO:0050661

Feature Viewer

pLDDT pTM Quality
93.65 0.88 High
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Predicted Structure (AlphaFold2)

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